Search of human proteins with 239508858

Search of human proteins with 239508858

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239508858 PREDICTED: hypothetical protein [Homo sapiens]
         (193 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239743189 PREDICTED: hypothetical protein XP_002342800 [Homo ...   414   e-116
gi|239508858 PREDICTED: hypothetical protein [Homo sapiens]           414   e-116
gi|239749145 PREDICTED: hypothetical protein XP_002346924 [Homo ...   410   e-115
gi|239743184 PREDICTED: hypothetical protein XP_002342799 [Homo ...   410   e-115
gi|239508849 PREDICTED: hypothetical protein [Homo sapiens]           410   e-115
gi|239754586 PREDICTED: hypothetical protein [Homo sapiens]           410   e-115
gi|239754580 PREDICTED: hypothetical protein [Homo sapiens]           409   e-114
gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo ...    32   0.34 
gi|239746640 PREDICTED: hypothetical protein XP_002344234 [Homo ...    32   0.34 
gi|51093859 calcium channel, voltage-dependent, T type, alpha 1I...    30   1.3  
gi|21361077 calcium channel, voltage-dependent, T type, alpha 1I...    30   1.3  
gi|239753559 PREDICTED: hypothetical protein XP_002345696 [Homo ...    30   1.7  
gi|239748103 PREDICTED: hypothetical protein [Homo sapiens]            30   1.7  
gi|239741999 PREDICTED: hypothetical protein XP_002342370 [Homo ...    30   1.7  
gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo sa...    30   1.7  
gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo sa...    30   1.7  
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      28   3.7  
gi|239754668 PREDICTED: mucin 12 [Homo sapiens]                        28   3.7  
gi|194097398 protein tyrosine phosphatase, receptor type, G prec...    28   3.7  
gi|191252801 WDFY family member 4 [Homo sapiens]                       28   3.7  
gi|98961138 ZXD family zinc finger C isoform 2 [Homo sapiens]          28   4.8  
gi|98961133 ZXD family zinc finger C isoform 1 [Homo sapiens]          28   4.8  
gi|169217249 PREDICTED: hypothetical protein [Homo sapiens]            28   6.3  
gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens]        28   6.3  
gi|31542731 major facilitator superfamily domain containing 7 [H...    28   6.3  
gi|239758148 PREDICTED: similar to mucin 11 [Homo sapiens]             27   8.3  
gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens]             27   8.3  
gi|239743293 PREDICTED: mucin 12 [Homo sapiens]                        27   8.3  
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ...    27   8.3  
gi|113204609 zinc finger protein 750 [Homo sapiens]                    27   8.3  

>gi|239743189 PREDICTED: hypothetical protein XP_002342800 [Homo
           sapiens]
          Length = 193

 Score =  414 bits (1063), Expect = e-116
 Identities = 193/193 (100%), Positives = 193/193 (100%)

Query: 1   MDKWAQTHRPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQATELEGRGQG 60
           MDKWAQTHRPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQATELEGRGQG
Sbjct: 1   MDKWAQTHRPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQATELEGRGQG 60

Query: 61  PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR 120
           PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR
Sbjct: 61  PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR 120

Query: 121 VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD 180
           VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD
Sbjct: 121 VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD 180

Query: 181 YWTYHTSPDCSYT 193
           YWTYHTSPDCSYT
Sbjct: 181 YWTYHTSPDCSYT 193


>gi|239508858 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score =  414 bits (1063), Expect = e-116
 Identities = 193/193 (100%), Positives = 193/193 (100%)

Query: 1   MDKWAQTHRPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQATELEGRGQG 60
           MDKWAQTHRPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQATELEGRGQG
Sbjct: 1   MDKWAQTHRPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQATELEGRGQG 60

Query: 61  PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR 120
           PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR
Sbjct: 61  PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR 120

Query: 121 VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD 180
           VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD
Sbjct: 121 VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD 180

Query: 181 YWTYHTSPDCSYT 193
           YWTYHTSPDCSYT
Sbjct: 181 YWTYHTSPDCSYT 193


>gi|239749145 PREDICTED: hypothetical protein XP_002346924 [Homo
           sapiens]
          Length = 193

 Score =  410 bits (1055), Expect = e-115
 Identities = 192/193 (99%), Positives = 192/193 (99%)

Query: 1   MDKWAQTHRPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQATELEGRGQG 60
           MDKWAQTHRPDGPPATAGPDSWTQAQCHV TTGRHGTRGQMDVTPQCTGQATELEGRGQG
Sbjct: 1   MDKWAQTHRPDGPPATAGPDSWTQAQCHVQTTGRHGTRGQMDVTPQCTGQATELEGRGQG 60

Query: 61  PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR 120
           PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR
Sbjct: 61  PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR 120

Query: 121 VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD 180
           VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD
Sbjct: 121 VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD 180

Query: 181 YWTYHTSPDCSYT 193
           YWTYHTSPDCSYT
Sbjct: 181 YWTYHTSPDCSYT 193


>gi|239743184 PREDICTED: hypothetical protein XP_002342799 [Homo
           sapiens]
          Length = 193

 Score =  410 bits (1055), Expect = e-115
 Identities = 192/193 (99%), Positives = 192/193 (99%)

Query: 1   MDKWAQTHRPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQATELEGRGQG 60
           MDKWAQTHRPDGPPATAGPDSWTQAQCHV TTGRHGTRGQMDVTPQCTGQATELEGRGQG
Sbjct: 1   MDKWAQTHRPDGPPATAGPDSWTQAQCHVQTTGRHGTRGQMDVTPQCTGQATELEGRGQG 60

Query: 61  PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR 120
           PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR
Sbjct: 61  PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR 120

Query: 121 VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD 180
           VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD
Sbjct: 121 VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD 180

Query: 181 YWTYHTSPDCSYT 193
           YWTYHTSPDCSYT
Sbjct: 181 YWTYHTSPDCSYT 193


>gi|239508849 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score =  410 bits (1055), Expect = e-115
 Identities = 192/193 (99%), Positives = 192/193 (99%)

Query: 1   MDKWAQTHRPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQATELEGRGQG 60
           MDKWAQTHRPDGPPATAGPDSWTQAQCHV TTGRHGTRGQMDVTPQCTGQATELEGRGQG
Sbjct: 1   MDKWAQTHRPDGPPATAGPDSWTQAQCHVQTTGRHGTRGQMDVTPQCTGQATELEGRGQG 60

Query: 61  PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR 120
           PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR
Sbjct: 61  PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR 120

Query: 121 VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD 180
           VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD
Sbjct: 121 VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD 180

Query: 181 YWTYHTSPDCSYT 193
           YWTYHTSPDCSYT
Sbjct: 181 YWTYHTSPDCSYT 193


>gi|239754586 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score =  410 bits (1054), Expect = e-115
 Identities = 191/193 (98%), Positives = 192/193 (99%)

Query: 1   MDKWAQTHRPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQATELEGRGQG 60
           MDKWAQTHRPDGPPATAGPDSWTQAQCHV TTGRHGTRGQMDVTPQCTGQATELEGRGQG
Sbjct: 1   MDKWAQTHRPDGPPATAGPDSWTQAQCHVQTTGRHGTRGQMDVTPQCTGQATELEGRGQG 60

Query: 61  PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR 120
           PFGISALESCETRVVAALEAGVFR+CAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR
Sbjct: 61  PFGISALESCETRVVAALEAGVFRICAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR 120

Query: 121 VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD 180
           VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD
Sbjct: 121 VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD 180

Query: 181 YWTYHTSPDCSYT 193
           YWTYHTSPDCSYT
Sbjct: 181 YWTYHTSPDCSYT 193


>gi|239754580 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score =  409 bits (1050), Expect = e-114
 Identities = 190/193 (98%), Positives = 191/193 (98%)

Query: 1   MDKWAQTHRPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQATELEGRGQG 60
           MDKWAQTHRPDGPPATAGPDSWTQAQCHV TTGRHGTRGQMDVTPQCTGQATELEGRGQG
Sbjct: 1   MDKWAQTHRPDGPPATAGPDSWTQAQCHVQTTGRHGTRGQMDVTPQCTGQATELEGRGQG 60

Query: 61  PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQR 120
           PFGISALESCETRVVAALEAGVFR+CAAPGPASGLDPIQRSVSQDTGC HNGSEDPSDQR
Sbjct: 61  PFGISALESCETRVVAALEAGVFRICAAPGPASGLDPIQRSVSQDTGCTHNGSEDPSDQR 120

Query: 121 VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD 180
           VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD
Sbjct: 121 VHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLKYCCVFQVEEVILQLTFVLD 180

Query: 181 YWTYHTSPDCSYT 193
           YWTYHTSPDCSYT
Sbjct: 181 YWTYHTSPDCSYT 193


>gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo
          sapiens]
          Length = 609

 Score = 32.0 bits (71), Expect = 0.34
 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 17 AGPDSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQATELEGRG 58
          AGPD+ TQ  CH  TTG  GT G      Q   Q++   GRG
Sbjct: 2  AGPDTGTQWWCHTQTTG--GTHGFDSHNAQTRLQSSRDVGRG 41


>gi|239746640 PREDICTED: hypothetical protein XP_002344234 [Homo
          sapiens]
          Length = 165

 Score = 32.0 bits (71), Expect = 0.34
 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 17 AGPDSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQATELEGRG 58
          AGPD+ TQ  CH  TTG  GT G      Q   Q++   GRG
Sbjct: 2  AGPDTGTQWWCHTQTTG--GTHGFDSHNAQTRLQSSRDVGRG 41


>gi|51093859 calcium channel, voltage-dependent, T type, alpha 1I
            subunit isoform b [Homo sapiens]
          Length = 2188

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 20/64 (31%), Positives = 23/64 (35%), Gaps = 25/64 (39%)

Query: 88   APGPASGLDPIQR-------------------------SVSQDTGCAHNGSEDPSDQRVH 122
            APGP +GL P  R                           S   GC H+ S DPSD+   
Sbjct: 2017 APGPRAGLSPAARRRLSLRGRGLFSLRGLRAHQRSHSSGGSTSPGCTHHDSMDPSDEEGR 2076

Query: 123  GLAG 126
            G AG
Sbjct: 2077 GGAG 2080


>gi|21361077 calcium channel, voltage-dependent, T type, alpha 1I
            subunit isoform a [Homo sapiens]
          Length = 2223

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 20/64 (31%), Positives = 23/64 (35%), Gaps = 25/64 (39%)

Query: 88   APGPASGLDPIQR-------------------------SVSQDTGCAHNGSEDPSDQRVH 122
            APGP +GL P  R                           S   GC H+ S DPSD+   
Sbjct: 2052 APGPRAGLSPAARRRLSLRGRGLFSLRGLRAHQRSHSSGGSTSPGCTHHDSMDPSDEEGR 2111

Query: 123  GLAG 126
            G AG
Sbjct: 2112 GGAG 2115


>gi|239753559 PREDICTED: hypothetical protein XP_002345696 [Homo
           sapiens]
          Length = 366

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 111 NGSEDPSDQRVHGLAGVVPSVPAVQGGQEEKQTAWFQPCF 150
           NGSE P  Q     +G  PS P+ +   E+K    F PCF
Sbjct: 18  NGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCF 57


>gi|239748103 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 366

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 111 NGSEDPSDQRVHGLAGVVPSVPAVQGGQEEKQTAWFQPCF 150
           NGSE P  Q     +G  PS P+ +   E+K    F PCF
Sbjct: 18  NGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCF 57


>gi|239741999 PREDICTED: hypothetical protein XP_002342370 [Homo
           sapiens]
          Length = 366

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 111 NGSEDPSDQRVHGLAGVVPSVPAVQGGQEEKQTAWFQPCF 150
           NGSE P  Q     +G  PS P+ +   E+K    F PCF
Sbjct: 18  NGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCF 57


>gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo
            sapiens]
          Length = 1782

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 16   TAGP---DSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQAT---ELEGRGQGPFGISALES 69
            TAGP   +  T+A     TT       Q+  +P  T +AT   E+EG      G+  +E 
Sbjct: 981  TAGPLGAEEGTEASAAEETTEMVSAVSQLTDSPDTTEEATPVQEVEG------GVPDIEE 1034

Query: 70   CETRVVAALEAGVFRV------CAAPGPASGLDPIQRSVSQ 104
             E R    L+A   +V          GP   L P+QR+ ++
Sbjct: 1035 QERRTQEVLQAVAEKVKEESQLPGTGGPEDVLQPVQRAEAE 1075


>gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo
           sapiens]
          Length = 1684

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 16  TAGP---DSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQAT---ELEGRGQGPFGISALES 69
           TAGP   +  T+A     TT       Q+  +P  T +AT   E+EG      G+  +E 
Sbjct: 883 TAGPLGAEEGTEASAAEETTEMVSAVSQLTDSPDTTEEATPVQEVEG------GVPDIEE 936

Query: 70  CETRVVAALEAGVFRV------CAAPGPASGLDPIQRSVSQ 104
            E R    L+A   +V          GP   L P+QR+ ++
Sbjct: 937 QERRTQEVLQAVAEKVKEESQLPGTGGPEDVLQPVQRAEAE 977


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 34/132 (25%), Positives = 48/132 (36%), Gaps = 8/132 (6%)

Query: 10  PDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQATELEGRGQGPFGISALES 69
           P GPP TAG      A+  V   G  G+ G      +   Q         GP GI+    
Sbjct: 334 PPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPG 393

Query: 70  CETRVVAALEAGVFRVCAAPGP-----ASGLDPIQRSVSQDTGCAHNGSEDPSDQRVHGL 124
            +  +  A   G   +  A GP     A+G   ++    +       G   P  +R  G 
Sbjct: 394 GKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGER--GE 451

Query: 125 AGVVPSVPAVQG 136
           AG +P VP  +G
Sbjct: 452 AG-IPGVPGAKG 462


>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
          Length = 1952

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 17/48 (35%), Positives = 19/48 (39%)

Query: 9   RPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVTPQCTGQATELEG 56
           RP     TA PDS T      H+T  H + G  D T       T L G
Sbjct: 921 RPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTXLVG 968


>gi|194097398 protein tyrosine phosphatase, receptor type, G
           precursor [Homo sapiens]
          Length = 1445

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 31/127 (24%), Positives = 43/127 (33%), Gaps = 15/127 (11%)

Query: 11  DGPPATAGPDSWTQAQCHVH----TTGRHGTRGQMDVTPQCTGQATELEGRGQGPFGISA 66
           D  P ++G  +WT +          TG   +      T      +T L G G G  GIS+
Sbjct: 469 DMAPISSGSSTWTSSGIPFSFVSMATGMGPSSSGSQATVASVVTSTLLAGLGFGGGGISS 528

Query: 67  LESC--ETRVVAALEAG---------VFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSED 115
             S    TR+  A  A               A+PGP     P +     + G     SE 
Sbjct: 529 FPSTVWPTRLPTAASASKQAARPVLATTEALASPGPDGDSSPTKDGEGTEEGEKDEKSES 588

Query: 116 PSDQRVH 122
              +R H
Sbjct: 589 EDGEREH 595


>gi|191252801 WDFY family member 4 [Homo sapiens]
          Length = 3184

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 103 SQDTGCAHNGSEDPSDQRVHGLAGVVPSVPAVQGGQEEKQTA 144
           ++D   A + +EDP  +    LA V P VP   GGQ    TA
Sbjct: 3   AEDLSKAEDRNEDPGSKNEGQLAAVQPDVP--HGGQSSSPTA 42


>gi|98961138 ZXD family zinc finger C isoform 2 [Homo sapiens]
          Length = 710

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 56  GRGQGPFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSED 115
           G G  P G   + S +  ++  L+ GV  + A PGPA+      R   Q +G +  G   
Sbjct: 120 GPGVAPAGAVTISSQD--LLVRLDRGVLALSAPPGPATAGAAAPRRAPQASGPSTPGYRC 177

Query: 116 PSDQ 119
           P  Q
Sbjct: 178 PEPQ 181


>gi|98961133 ZXD family zinc finger C isoform 1 [Homo sapiens]
          Length = 858

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 56  GRGQGPFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSED 115
           G G  P G   + S +  ++  L+ GV  + A PGPA+      R   Q +G +  G   
Sbjct: 120 GPGVAPAGAVTISSQD--LLVRLDRGVLALSAPPGPATAGAAAPRRAPQASGPSTPGYRC 177

Query: 116 PSDQ 119
           P  Q
Sbjct: 178 PEPQ 181


>gi|169217249 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 202

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 31/129 (24%), Positives = 44/129 (34%), Gaps = 18/129 (13%)

Query: 13  PPATAGPDSWTQ----AQCHVHTTGRHGT-RGQMDVTPQCTGQATELEGRGQGPFGISAL 67
           P  TA   SW +    A  H    GR GT +G  D               GQ P G   L
Sbjct: 38  PQDTADGVSWAKMNRAASRHADPVGRGGTWQGASDRW-------------GQSPAGKGGL 84

Query: 68  ESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHNGSEDPSDQRVHGLAGV 127
             C    +++   G+  V +   P+      QRS+ +  G  H             L+G+
Sbjct: 85  PPCSAARISSSPGGLPPVLSRVHPSVPRSVSQRSLMEALGSGHYVGGSIRSMAAAALSGL 144

Query: 128 VPSVPAVQG 136
              +   QG
Sbjct: 145 AVRLSRPQG 153


>gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens]
          Length = 703

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 10/96 (10%)

Query: 10  PDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDV--TPQCTGQATELEGRG-------QG 60
           P GPP   GP        H  + G  G +G+     +P   G+A E    G        G
Sbjct: 513 PQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGLQGVPG 572

Query: 61  PFGISALESCETRVVAALEAGVFRVCAAPGPASGLD 96
           P G + L+  +       E G       PG ASGLD
Sbjct: 573 PKGEAGLDGAKGEKGFQGEKGDRGPLGLPG-ASGLD 607


>gi|31542731 major facilitator superfamily domain containing 7 [Homo
           sapiens]
          Length = 559

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 7/85 (8%)

Query: 33  GRHGTRGQMDVTPQCTGQATELEG-RGQGPFGISALESCETRVVAALEAGVFRVCAAPGP 91
           GR G  G    TP+CT +   LE  RG G    S   +C      A         + PG 
Sbjct: 477 GRAGVLGPSTATPECTARGASLEDPRGPG----SPHPACHRATPRAQGPAATDAPSRPGR 532

Query: 92  ASGLDPIQRSVSQDTGCAHNGSEDP 116
            +G   +Q S   D   +H+    P
Sbjct: 533 LAG--RVQASRFIDPAGSHSSFSSP 555


>gi|239758148 PREDICTED: similar to mucin 11 [Homo sapiens]
          Length = 587

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 14/36 (38%), Positives = 16/36 (44%)

Query: 9   RPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVT 44
           RP     TA PDS T      H+T  H + G  D T
Sbjct: 159 RPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTT 194


>gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens]
          Length = 456

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 14/36 (38%), Positives = 16/36 (44%)

Query: 9  RPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVT 44
          RP     TA PDS T      H+T  H + G  D T
Sbjct: 53 RPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTT 88


>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
          Length = 5478

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 14/36 (38%), Positives = 16/36 (44%)

Query: 9    RPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVT 44
            RP     TA PDS T      H+T  H + G  D T
Sbjct: 1000 RPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTT 1035



 Score = 27.3 bits (59), Expect = 8.3
 Identities = 14/36 (38%), Positives = 16/36 (44%)

Query: 9    RPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVT 44
            RP     TA PDS T      H+T  H + G  D T
Sbjct: 2083 RPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTT 2118



 Score = 27.3 bits (59), Expect = 8.3
 Identities = 14/36 (38%), Positives = 16/36 (44%)

Query: 9    RPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVT 44
            RP     TA PDS T      H+T  H + G  D T
Sbjct: 3640 RPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTT 3675


>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
           sapiens]
          Length = 2036

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 14/36 (38%), Positives = 16/36 (44%)

Query: 9   RPDGPPATAGPDSWTQAQCHVHTTGRHGTRGQMDVT 44
           RP     TA PDS T      H+T  H + G  D T
Sbjct: 487 RPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTT 522


>gi|113204609 zinc finger protein 750 [Homo sapiens]
          Length = 723

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 8/105 (7%)

Query: 61  PFGISALESCETRVVAALEAGVFRVCAAPGPASGLDPIQRSVSQDTGCAHN----GSEDP 116
           P  +S  + C T+       G  R   A  PA+ +     +   + G +H     GS D 
Sbjct: 550 PLNLSVKDPCNTQAPRPAFPGRPR---AAEPAAAVPQKTGTEGSEDGPSHPETKPGSLDG 606

Query: 117 SDQRVHGLAGVVPSVPAVQGGQEEKQTAWFQPCFSVGAMRPRRLK 161
                 G     P   AV   +E+KQTA    C  + A  PR ++
Sbjct: 607 DGAPPTGPGEEAPDACAVDSSEEQKQTAAVALC-QLAAYSPRNIR 650


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,406,021
Number of Sequences: 37866
Number of extensions: 454204
Number of successful extensions: 1167
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1132
Number of HSP's gapped (non-prelim): 44
length of query: 193
length of database: 18,247,518
effective HSP length: 97
effective length of query: 96
effective length of database: 14,574,516
effective search space: 1399153536
effective search space used: 1399153536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.