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Search of human proteins with 239508842
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo
sapiens]
(174 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo ... 367 e-102
gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 367 e-102
gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 260 4e-70
gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo ... 260 4e-70
gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 199 1e-51
gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 195 2e-50
gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo ... 190 6e-49
gi|169184221 PREDICTED: family with sequence similarity 27, memb... 189 1e-48
gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo ... 187 3e-48
gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 186 1e-47
gi|239752497 PREDICTED: similar to family with sequence similari... 183 6e-47
gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo ... 182 1e-46
gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 178 2e-45
gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo ... 178 2e-45
gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo ... 178 2e-45
gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 175 2e-44
gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 175 2e-44
gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 175 2e-44
gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 168 2e-42
gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo ... 53 1e-07
gi|49574498 hypothetical protein LOC118461 isoform 2 [Homo sapiens] 44 9e-05
gi|217416343 fibrosin-like 1 [Homo sapiens] 42 2e-04
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 38 0.004
gi|51988914 fibroblast growth factor receptor-like 1 precursor [... 38 0.005
gi|51988910 fibroblast growth factor receptor-like 1 precursor [... 38 0.005
gi|51988912 fibroblast growth factor receptor-like 1 precursor [... 38 0.005
gi|169209818 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
gi|7706156 lysine-rich coiled-coil 1 [Homo sapiens] 37 0.011
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 36 0.015
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 35 0.025
>gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo
sapiens]
Length = 174
Score = 367 bits (941), Expect = e-102
Identities = 174/174 (100%), Positives = 174/174 (100%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTEK 120
CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTEK
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTEK 120
Query: 121 EVAQYRDEISVSLRPTLFTLSRSSESQSGTAAEMIDNRPHDPGRDADRGSLKTR 174
EVAQYRDEISVSLRPTLFTLSRSSESQSGTAAEMIDNRPHDPGRDADRGSLKTR
Sbjct: 121 EVAQYRDEISVSLRPTLFTLSRSSESQSGTAAEMIDNRPHDPGRDADRGSLKTR 174
>gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 174
Score = 367 bits (941), Expect = e-102
Identities = 174/174 (100%), Positives = 174/174 (100%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTEK 120
CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTEK
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTEK 120
Query: 121 EVAQYRDEISVSLRPTLFTLSRSSESQSGTAAEMIDNRPHDPGRDADRGSLKTR 174
EVAQYRDEISVSLRPTLFTLSRSSESQSGTAAEMIDNRPHDPGRDADRGSLKTR
Sbjct: 121 EVAQYRDEISVSLRPTLFTLSRSSESQSGTAAEMIDNRPHDPGRDADRGSLKTR 174
>gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 131
Score = 260 bits (665), Expect = 4e-70
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTE 119
CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTE
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTE 119
>gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo
sapiens]
Length = 131
Score = 260 bits (665), Expect = 4e-70
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTE 119
CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTE
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTE 119
>gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 199 bits (506), Expect = 1e-51
Identities = 98/121 (80%), Positives = 102/121 (84%), Gaps = 3/121 (2%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MGMRFQLLR+RRISSRGPG A KADP RRK+LT GLMTQ ETQKEAHQRQAAM +T LW
Sbjct: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH---KH 117
TGHIRPKTHTH G H QTHR+RERNTQRLRDRERRENGRHTHTHT THT HT KH
Sbjct: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
Query: 118 T 118
T
Sbjct: 121 T 121
>gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 195 bits (495), Expect = 2e-50
Identities = 96/121 (79%), Positives = 100/121 (82%), Gaps = 3/121 (2%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MGMRFQLLR+RRISSRGPG A KADP RRK+LT GLMTQ ETQKEAHQRQAAM +T LW
Sbjct: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH---KH 117
TGHIRPKTHTH G H QTHR+RERNTQRLRDRERRE GRHTH HT THT HT KH
Sbjct: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRETGRHTHRHTQTHTQRHTAEALKH 120
Query: 118 T 118
T
Sbjct: 121 T 121
>gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo
sapiens]
Length = 125
Score = 190 bits (482), Expect = 6e-49
Identities = 92/120 (76%), Positives = 101/120 (84%), Gaps = 5/120 (4%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MGMR QLLRDRRISSRGPG H KADP ++K+LTTGLMTQAETQKEA QRQAAM +T LW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTEK 120
TGH++PKTHTH G H QTHR+RERNTQRLRDRERRENGRHTH HT THT +HTE+
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHRHT-----THTQRHTEE 115
>gi|169184221 PREDICTED: family with sequence similarity 27, member
E3 [Homo sapiens]
Length = 113
Score = 189 bits (479), Expect = 1e-48
Identities = 89/107 (83%), Positives = 94/107 (87%)
Query: 5 FQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLWCTGH 64
FQLLRDRRISSRGPG H KA+P RRK LTTGLMTQAE QK+AHQRQAAM ET LWCTGH
Sbjct: 4 FQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGH 63
Query: 65 IRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTH 111
IRP+THTH GTH QT R+RERNTQRLRDRERRENGRHTHT+T HTH
Sbjct: 64 IRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTH 110
>gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo
sapiens]
Length = 124
Score = 187 bits (476), Expect = 3e-48
Identities = 92/119 (77%), Positives = 99/119 (83%), Gaps = 1/119 (0%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MGMR QLLRDRRISSRGPG H KADP ++K+LTTGLMTQAETQKEA QRQAAM +T LW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHT-HTHKHT 118
TGH++PKTHTH G H QTHR+RERNTQRLRDRERRENGRHTHT T T HT KHT
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEALKHT 119
>gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 113
Score = 186 bits (471), Expect = 1e-47
Identities = 88/107 (82%), Positives = 93/107 (86%)
Query: 5 FQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLWCTGH 64
FQLLRDRRISSRGPG H KA+ RRK LTTGLMTQAE QK+AHQRQAAM ET LWCTGH
Sbjct: 4 FQLLRDRRISSRGPGLHTPKAETRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGH 63
Query: 65 IRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTH 111
IRP+THTH GTH QT R+RERNTQRLRDRERRENGRHTHT+T HTH
Sbjct: 64 IRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTH 110
>gi|239752497 PREDICTED: similar to family with sequence similarity
27, member D1, partial [Homo sapiens]
Length = 122
Score = 183 bits (465), Expect = 6e-47
Identities = 89/115 (77%), Positives = 96/115 (83%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MGMRFQLLR++RISSRGPG H KAD RRK+LT GLMTQAE +KEAHQRQAAM +T LW
Sbjct: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH 115
TGHI PKTHTH G H QTHR+RERNTQRLRDRERRE RHTHTHT T THT +H
Sbjct: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSH 115
>gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo
sapiens]
Length = 122
Score = 182 bits (462), Expect = 1e-46
Identities = 91/121 (75%), Positives = 99/121 (81%), Gaps = 7/121 (5%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MGMR QLLRDRRISSRGPG H KADP ++K+LTTGLMTQAETQKEA QRQAAM +T LW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH---KH 117
TGH++PKTHTH G H QTHR+RERNTQRLRDRERREN HTHT+THT HT KH
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERREN----HTHTETHTQRHTEEALKH 116
Query: 118 T 118
T
Sbjct: 117 T 117
>gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 122
Score = 178 bits (451), Expect = 2e-45
Identities = 90/118 (76%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MG R QLL+DRRI SRGPG HA KADP RK+LTTGLMTQAETQKE QRQAAM ET LW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHT 118
TGHI+PKTH H GTH QTHR+ ERNTQRLRDRERRENGRHTHT T HT KHT
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHT-AEALKHT 117
>gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo
sapiens]
Length = 122
Score = 178 bits (451), Expect = 2e-45
Identities = 90/118 (76%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MG R QLL+DRRI SRGPG HA KADP RK+LTTGLMTQAETQKE QRQAAM ET LW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHT 118
TGHI+PKTH H GTH QTHR+ ERNTQRLRDRERRENGRHTHT T HT KHT
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHT-AEALKHT 117
>gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo
sapiens]
Length = 122
Score = 178 bits (451), Expect = 2e-45
Identities = 90/118 (76%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MG R QLL+DRRI SRGPG HA KADP RK+LTTGLMTQAETQKE QRQAAM ET LW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHT 118
TGHI+PKTH H GTH QTHR+ ERNTQRLRDRERRENGRHTHT T HT KHT
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHT-AEALKHT 117
>gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 175 bits (444), Expect = 2e-44
Identities = 88/121 (72%), Positives = 94/121 (77%), Gaps = 3/121 (2%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MGM QLLRDRR+SSRGPG H K +P +RK LT G TQAETQK AHQRQAAM E L
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHT---HKH 117
CTGHIRPKTH H GTH QT R+RERNTQRLRDRERRENGRHT T+T THT +HT KH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 118 T 118
T
Sbjct: 121 T 121
>gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 175 bits (444), Expect = 2e-44
Identities = 88/121 (72%), Positives = 94/121 (77%), Gaps = 3/121 (2%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MGM QLLRDRR+SSRGPG H K +P +RK LT G TQAETQK AHQRQAAM E L
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHT---HKH 117
CTGHIRPKTH H GTH QT R+RERNTQRLRDRERRENGRHT T+T THT +HT KH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 118 T 118
T
Sbjct: 121 T 121
>gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 175 bits (444), Expect = 2e-44
Identities = 88/121 (72%), Positives = 94/121 (77%), Gaps = 3/121 (2%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MGM QLLRDRR+SSRGPG H K +P +RK LT G TQAETQK AHQRQAAM E L
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHT---HKH 117
CTGHIRPKTH H GTH QT R+RERNTQRLRDRERRENGRHT T+T THT +HT KH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 118 T 118
T
Sbjct: 121 T 121
>gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 134
Score = 168 bits (425), Expect = 2e-42
Identities = 87/130 (66%), Positives = 96/130 (73%), Gaps = 8/130 (6%)
Query: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
MGMRFQLLRDR ISS GPG H KA P RR++LTTG TQAETQKEAHQRQA M E LW
Sbjct: 1 MGMRFQLLRDRCISSHGPGLHTPKAGPRRRRRLTTGCTTQAETQKEAHQRQADMREIALW 60
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTH--THTHKHT 118
TG IRP+T+ QT R+RERNTQR RD+ER+ENGRHTHTHT THTH THTH HT
Sbjct: 61 RTGRIRPETYM------QTDRERERNTQRPRDKERKENGRHTHTHTLTHTHSHTHTHTHT 114
Query: 119 EKEVAQYRDE 128
+ +R E
Sbjct: 115 QTHTQDHRAE 124
>gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo
sapiens]
Length = 228
Score = 53.1 bits (126), Expect = 1e-07
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 31 KQLTTGLMTQAETQKEAHQ---RQAAMPETVLWCTGHIRPKTHTHKGTHAQTHRKRERN- 86
K+L TG TQAET+ EA Q R+A P + T R +THT + R++ER
Sbjct: 18 KRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPR-RTHTQTDRDRKRGRRKEREG 76
Query: 87 ----TQRLRDRERRENGRHTHTHTDTHTHTHTHKHTEKEV 122
+R R+R +RE T T HTHT TH+HT +
Sbjct: 77 REGERERERERLKRETVVGTQTRARAHTHTQTHRHTHTPI 116
>gi|49574498 hypothetical protein LOC118461 isoform 2 [Homo sapiens]
Length = 719
Score = 43.5 bits (101), Expect = 9e-05
Identities = 21/57 (36%), Positives = 27/57 (47%)
Query: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKH 117
C P T K Q R+ + + ER ++THTHT THTHTH H+H
Sbjct: 650 CNRDPEPGGATEKMKTHQLENGLSRSVSQETEPEREAGLQNTHTHTHTHTHTHDHQH 706
>gi|217416343 fibrosin-like 1 [Homo sapiens]
Length = 1045
Score = 42.4 bits (98), Expect = 2e-04
Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 27/121 (22%)
Query: 13 ISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLWCTGHIRPKTHTH 72
+S GPGPH T+ L +++ Q + H A P T+ P +
Sbjct: 351 LSPHGPGPHLS----------TSHLALRSQAQHQLHAAMFAAPPTLP--PPPALPASSLV 398
Query: 73 KGTHAQTHR--KRERNTQRLRDRERR-------------ENGRHTHTHTDTHTHTHTHKH 117
H H ++E NT+ L R E +H HTH TH HTH H+H
Sbjct: 399 LPGHPADHELLRQELNTRFLVQSAERPGASLGPGALLRAEFHQHQHTHQHTHQHTHQHQH 458
Query: 118 T 118
T
Sbjct: 459 T 459
>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
[Homo sapiens]
Length = 213
Score = 38.1 bits (87), Expect = 0.004
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 11/99 (11%)
Query: 29 RRKQLTTGLMTQAETQKEAHQRQAAMPETVLWCTGHIRPKTHTHKGTHAQTHRKRERNTQ 88
++K++ T ET +E +RQA TG R H+ R+RER +
Sbjct: 126 KQKEMGRERQTDRETDRE-RERQAERERE----TGRERKTEDRHR------ERERERKRE 174
Query: 89 RLRDRERRENGRHTHTHTDTHTHTHTHKHTEKEVAQYRD 127
R R RE +E RHT + T + ++E + RD
Sbjct: 175 RERKRETKERERHTDMERERQRETDRKRDRQRESERERD 213
Score = 36.2 bits (82), Expect = 0.015
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 68 KTHTHKGTHAQTHRKRERNTQRLRDRER---RENGRHTHTHTDTHTHTHTHKHTEKEVAQ 124
+T H T + +++ER +R+RDRER +E GR T +T E+E +
Sbjct: 97 ETDRHTETDRERQKQKEREMERVRDREREKQKEMGRERQTDRETDRERERQAERERETGR 156
Query: 125 YR 126
R
Sbjct: 157 ER 158
Score = 35.4 bits (80), Expect = 0.025
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 78 QTHRKRERNTQRLRDRER-RENGRHTHTHTDTHTHTHTHKHTEKEVAQYRDEISVSLRPT 136
QT R+ ER +R RDR+R RE R +T HT T + +K+ + + + R
Sbjct: 67 QTDREGERQRERERDRDRQRETERERDKERETDRHTETDRERQKQKEREMERVRDREREK 126
Query: 137 LFTLSRSSESQSGTAAE 153
+ R ++ T E
Sbjct: 127 QKEMGRERQTDRETDRE 143
Score = 32.7 bits (73), Expect = 0.16
Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 7/135 (5%)
Query: 34 TTGLMTQAETQKEAHQRQAAMPETVLWCTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDR 93
T G T ET+ QR+ R K + H++ R+R+R R RDR
Sbjct: 5 TEGRHTHTETETMDRQRERRRETD----RERDRAKESKTEDRHSERDRQRDRERNRERDR 60
Query: 94 ERRENGRHTHTHTDTHTHTHTHKHTEKEVAQYRDEISVSLRPTLFTLSRSSESQSGTAAE 153
+ RE + T + + ++E + RD+ + R T R + Q E
Sbjct: 61 D-REREKQTDREGERQRERERDRDRQRETERERDKERETDRHT--ETDRERQKQKEREME 117
Query: 154 MIDNRPHDPGRDADR 168
+ +R + ++ R
Sbjct: 118 RVRDREREKQKEMGR 132
>gi|51988914 fibroblast growth factor receptor-like 1 precursor
[Homo sapiens]
Length = 504
Score = 37.7 bits (86), Expect = 0.005
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 101 HTHTHTDTHTHTHTHKHTEKEVAQY 125
+T HT THTH+HTH H E +V Q+
Sbjct: 475 YTDIHTHTHTHSHTHSHVEGKVHQH 499
Score = 26.9 bits (58), Expect = 8.9
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 19/49 (38%)
Query: 67 PKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH 115
PK +T TH TH HTH+H + H H H
Sbjct: 472 PKLYTDIHTHTHTHS-------------------HTHSHVEGKVHQHIH 501
>gi|51988910 fibroblast growth factor receptor-like 1 precursor
[Homo sapiens]
Length = 504
Score = 37.7 bits (86), Expect = 0.005
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 101 HTHTHTDTHTHTHTHKHTEKEVAQY 125
+T HT THTH+HTH H E +V Q+
Sbjct: 475 YTDIHTHTHTHSHTHSHVEGKVHQH 499
Score = 26.9 bits (58), Expect = 8.9
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 19/49 (38%)
Query: 67 PKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH 115
PK +T TH TH HTH+H + H H H
Sbjct: 472 PKLYTDIHTHTHTHS-------------------HTHSHVEGKVHQHIH 501
>gi|51988912 fibroblast growth factor receptor-like 1 precursor
[Homo sapiens]
Length = 504
Score = 37.7 bits (86), Expect = 0.005
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 101 HTHTHTDTHTHTHTHKHTEKEVAQY 125
+T HT THTH+HTH H E +V Q+
Sbjct: 475 YTDIHTHTHTHSHTHSHVEGKVHQH 499
Score = 26.9 bits (58), Expect = 8.9
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 19/49 (38%)
Query: 67 PKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH 115
PK +T TH TH HTH+H + H H H
Sbjct: 472 PKLYTDIHTHTHTHS-------------------HTHSHVEGKVHQHIH 501
>gi|169209818 PREDICTED: hypothetical protein [Homo sapiens]
Length = 135
Score = 37.0 bits (84), Expect = 0.009
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 69 THTHKGTHAQTHRKRERNTQRLRDRER 95
THTH TH + R+ ER T+R R+RER
Sbjct: 74 THTHTHTHTENERESERETERERERER 100
Score = 31.6 bits (70), Expect = 0.36
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 101 HTHTHTDTHTHTHTHKHTEKEVAQYRDEIS--VSLR-PTLFTL 140
HTHTHT T + + TE+E + RD + SLR P +++L
Sbjct: 75 HTHTHTHTENERESERETERERERERDWLKELCSLRIPKIYSL 117
Score = 30.8 bits (68), Expect = 0.62
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 104 THTDTHTHTHTHKHTEKEVAQYRD 127
THT THTHT + +E+E + R+
Sbjct: 74 THTHTHTHTENERESERETERERE 97
>gi|7706156 lysine-rich coiled-coil 1 [Homo sapiens]
Length = 259
Score = 36.6 bits (83), Expect = 0.011
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 69 THTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTEKEVAQYRDE 128
T TH+ +H Q H+KR+R+ + R++ E +H + HK +++ + E
Sbjct: 146 TSTHQASHKQIHQKRKRHPEEGREKSEEERSKHKRKKSCEEIDLDKHKSIQRKKTEVEIE 205
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 36.2 bits (82), Expect = 0.015
Identities = 23/87 (26%), Positives = 37/87 (42%)
Query: 82 KRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTEKEVAQYRDEISVSLRPTLFTLS 141
++ER+ R RDRERR + T+ + D T + E+E + R+ R
Sbjct: 89 EKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRD 148
Query: 142 RSSESQSGTAAEMIDNRPHDPGRDADR 168
R E + T + R + R+ DR
Sbjct: 149 REKERERQTEKDRDGQRETETERERDR 175
Score = 32.0 bits (71), Expect = 0.28
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 13/91 (14%)
Query: 40 QAETQKEAHQRQAAMPETVLWCTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERR--- 96
+ ET++E + + E +T + T ++RER T R RDR+R+
Sbjct: 166 ETETERERDREREKQKER----------ETERDRDRQRDTEKERERQTDRERDRQRKTQT 215
Query: 97 ENGRHTHTHTDTHTHTHTHKHTEKEVAQYRD 127
E R T + T + +++ + RD
Sbjct: 216 ERQRETDREGERETDRRRERQRDRDRGKERD 246
Score = 30.8 bits (68), Expect = 0.62
Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 1/110 (0%)
Query: 66 RPKTHTHKGTHAQTHRKRERNTQRLRDRER-RENGRHTHTHTDTHTHTHTHKHTEKEVAQ 124
R + K +R RE+ T+ RDRER ++ GR + E+E
Sbjct: 98 RDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQT 157
Query: 125 YRDEISVSLRPTLFTLSRSSESQSGTAAEMIDNRPHDPGRDADRGSLKTR 174
+D T R E Q E +R D ++ +R + + R
Sbjct: 158 EKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERERQTDRER 207
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 35.4 bits (80), Expect = 0.025
Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 20/141 (14%)
Query: 40 QAETQKEAHQRQAAMPETVLWCTGHIRPKTHTHKGTHAQTHRKRERNTQ--RLRDRERR- 96
Q + Q+E +++ A E + +T ++ Q R+RE+N Q R R+R+R
Sbjct: 142 QTDGQRERERQRDAEKERERQTDRERQRQTERNR----QKEREREKNRQERRERERQREK 197
Query: 97 ---------ENGRHTHTHTDTHTHTHTHKHTEKEVAQYRDEISVSLRPTLFTLSRSSESQ 147
E GR +T T T + T++E RD + R R S+
Sbjct: 198 ENKTEDRHSERGRERERERETETETERKRQTDRE----RDRQRKTEREREKQAERERASE 253
Query: 148 SGTAAEMIDNRPHDPGRDADR 168
T + R D RD DR
Sbjct: 254 RETERDKERERERDRDRDRDR 274
Score = 33.9 bits (76), Expect = 0.073
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 20/89 (22%)
Query: 39 TQAETQKEAHQRQAAMPETVLWCTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERREN 98
T+ E +K+A + +A+ ET + ++RER R RDR+RR+
Sbjct: 238 TEREREKQAERERASERET--------------------ERDKERERERDRDRDRDRRQK 277
Query: 99 GRHTHTHTDTHTHTHTHKHTEKEVAQYRD 127
R T T + TE++ + R+
Sbjct: 278 ERERQTDRKRQRRTERDRETERKRERQRE 306
Score = 33.1 bits (74), Expect = 0.12
Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 14/91 (15%)
Query: 78 QTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTEKEVAQYRDEISVSLRPTL 137
+ R+RER+ Q R+RE RE R + T + ++E + R+
Sbjct: 370 ERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQRE---------- 419
Query: 138 FTLSRSSESQSGTAAEMIDNRPHDPGRDADR 168
R + +S E R GR+ DR
Sbjct: 420 ----REKDRESERGRERGREREKQKGRERDR 446
Score = 32.0 bits (71), Expect = 0.28
Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Query: 81 RKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHTEKEVAQYRDEISVSLRPTLFTL 140
R+R R +R R RE+R+ R T + H+ ++ + RD R T
Sbjct: 54 RERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRER 113
Query: 141 SRSSESQSGTAAEMIDNRPHDPGRDADRG 169
R E + E R + R+ +RG
Sbjct: 114 DRQREKERNRQKE----RERETEREGERG 138
Score = 32.0 bits (71), Expect = 0.28
Identities = 27/114 (23%), Positives = 40/114 (35%), Gaps = 5/114 (4%)
Query: 66 RPKTHTHKGTHAQTHRKRERNTQRLRDRER-----RENGRHTHTHTDTHTHTHTHKHTEK 120
R K T + T + R+RE++ R RDR R RE R T + ++ +K
Sbjct: 66 REKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQK 125
Query: 121 EVAQYRDEISVSLRPTLFTLSRSSESQSGTAAEMIDNRPHDPGRDADRGSLKTR 174
E + + R R E Q E + R +R K R
Sbjct: 126 ERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKER 179
Score = 32.0 bits (71), Expect = 0.28
Identities = 33/166 (19%), Positives = 60/166 (36%), Gaps = 9/166 (5%)
Query: 9 RDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLWCTGHIRPK 68
R R ++ H+ + R++ T T+ E +++ + + +T +
Sbjct: 193 RQREKENKTEDRHSERGRERERERETE---TETERKRQTDRERDRQRKTEREREKQAERE 249
Query: 69 THTHKGTHAQTHRKRERNTQRLRDRERRENGRHT------HTHTDTHTHTHTHKHTEKEV 122
+ + T R+RER+ R RDR ++E R T T D T + E+E
Sbjct: 250 RASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERER 309
Query: 123 AQYRDEISVSLRPTLFTLSRSSESQSGTAAEMIDNRPHDPGRDADR 168
+ R+ R R E++ E R D +R
Sbjct: 310 ERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRER 355
Score = 30.0 bits (66), Expect = 1.1
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 13/106 (12%)
Query: 66 RPKTHTHKGTHAQTHRKRERNTQRLRDRER---RENGRHTHTHTDTHTHTHTHKHTEKEV 122
R + + T +T RKRER ++ R R+R RE R + T + EKE
Sbjct: 62 RERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKER 121
Query: 123 AQYRDEISVSLRPTLFTLSRSSESQSGTAAEMIDNRPHDPGRDADR 168
+ ++ + R E + G + R + RDA++
Sbjct: 122 NRQKERERETER----------EGERGRDRQTDGQRERERQRDAEK 157
Score = 27.7 bits (60), Expect = 5.2
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 64 HIRPKTHTHKGTHAQTHRKR------ERNTQRLRDRE-RRENGRHTHTHTDTHTHTHTHK 116
H + K QT R+R ERN Q+ R+RE RE R TD +
Sbjct: 94 HRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQR 153
Query: 117 HTEKEVAQYRD 127
EKE + D
Sbjct: 154 DAEKERERQTD 164
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.127 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,256,241
Number of Sequences: 37866
Number of extensions: 300074
Number of successful extensions: 3204
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 1905
Number of HSP's gapped (non-prelim): 684
length of query: 174
length of database: 18,247,518
effective HSP length: 95
effective length of query: 79
effective length of database: 14,650,248
effective search space: 1157369592
effective search space used: 1157369592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.