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Search of human proteins with 23592242
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23592242 vestigial-like 2 isoform 2 [Homo sapiens]
(143 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23592242 vestigial-like 2 isoform 2 [Homo sapiens] 295 9e-81
gi|32880231 vestigial-like 2 isoform 1 [Homo sapiens] 270 2e-73
gi|56550035 colon carcinoma related protein [Homo sapiens] 98 3e-21
gi|7706741 vestigial like 1 [Homo sapiens] 65 3e-11
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 35 0.021
gi|45827771 autoantigen RCD8 [Homo sapiens] 34 0.036
gi|27477113 sterol regulatory element-binding transcription fact... 33 0.11
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 32 0.14
gi|169218320 PREDICTED: similar to BCL2-associated transcription... 32 0.18
gi|117938254 BCL2-associated transcription factor 1 isoform 3 [H... 32 0.18
gi|117938251 BCL2-associated transcription factor 1 isoform 2 [H... 32 0.18
gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Hom... 32 0.18
gi|167234419 thyroid hormone receptor associated protein 3 [Homo... 31 0.31
gi|55741677 SET domain containing 1A [Homo sapiens] 30 0.53
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 30 0.53
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 30 0.53
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 30 0.53
gi|78191787 early estrogen-induced gene 1 protein isoform a [Hom... 30 0.53
gi|42558264 early estrogen-induced gene 1 protein isoform b [Hom... 30 0.53
gi|31542667 transmembrane protein 40 [Homo sapiens] 30 0.53
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 30 0.69
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 30 0.69
gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens] 30 0.90
gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens] 30 0.90
gi|210032580 SET domain containing 1B [Homo sapiens] 30 0.90
gi|50083281 KIAA1853 protein [Homo sapiens] 30 0.90
gi|110815815 centlein isoform 1 [Homo sapiens] 30 0.90
gi|50811873 suppressor of hairy wing homolog 4 isoform 2 [Homo s... 30 0.90
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa... 30 0.90
gi|50811871 suppressor of hairy wing homolog 4 isoform 1 [Homo s... 30 0.90
>gi|23592242 vestigial-like 2 isoform 2 [Homo sapiens]
Length = 143
Score = 295 bits (755), Expect = 9e-81
Identities = 143/143 (100%), Positives = 143/143 (100%)
Query: 1 MSCLDVMYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTP 60
MSCLDVMYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTP
Sbjct: 1 MSCLDVMYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTP 60
Query: 61 ASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSS 120
ASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSS
Sbjct: 61 ASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSS 120
Query: 121 KAPRSSGPWRARRYSLCGASLLS 143
KAPRSSGPWRARRYSLCGASLLS
Sbjct: 121 KAPRSSGPWRARRYSLCGASLLS 143
>gi|32880231 vestigial-like 2 isoform 1 [Homo sapiens]
Length = 317
Score = 270 bits (691), Expect = 2e-73
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 MSCLDVMYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTP 60
MSCLDVMYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTP
Sbjct: 1 MSCLDVMYQVYGPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTP 60
Query: 61 ASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSS 120
ASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSS
Sbjct: 61 ASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSS 120
Query: 121 KAPRSSGPWR 130
KAPRSSGPWR
Sbjct: 121 KAPRSSGPWR 130
Score = 29.3 bits (64), Expect = 1.2
Identities = 13/13 (100%), Positives = 13/13 (100%)
Query: 131 ARRYSLCGASLLS 143
ARRYSLCGASLLS
Sbjct: 305 ARRYSLCGASLLS 317
>gi|56550035 colon carcinoma related protein [Homo sapiens]
Length = 326
Score = 97.8 bits (242), Expect = 3e-21
Identities = 66/151 (43%), Positives = 77/151 (50%), Gaps = 38/151 (25%)
Query: 1 MSCLDVMYQVYGPPQPYFAAAYTP-----------YHQ---------KLAYYSKMQEAQE 40
MSC +VMY PQPY A+ Y P Y+Q KLA +SKMQ++ E
Sbjct: 1 MSCAEVMYH----PQPYGASQYLPNPMAATTCPTAYYQPAPQPGQQKKLAVFSKMQDSLE 56
Query: 41 CNASPSSSGSGSSSFSSQTPASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVD 100
PS EEE EK++P E EY+NSRCVLFTYFQGDI SVVD
Sbjct: 57 VTL-PSKQEEED------------EEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVD 103
Query: 101 EHFSRALSQPSSYSPSCTSSKAPRSSGP-WR 130
EHFSRAL Q + P SK+ P WR
Sbjct: 104 EHFSRALGQAITLHPESAISKSKMGLTPLWR 134
>gi|7706741 vestigial like 1 [Homo sapiens]
Length = 258
Score = 64.7 bits (156), Expect = 3e-11
Identities = 40/73 (54%), Positives = 46/73 (63%), Gaps = 16/73 (21%)
Query: 72 KERPPEAEYINSRCVLFTYFQGDISSVVDEHFSRALS---QPSSYSPSCTS--------- 119
K++P + E+ NSRCVLFTYFQGDISSVVDEHFSRALS P +PS S
Sbjct: 15 KQKPIKTEW-NSRCVLFTYFQGDISSVVDEHFSRALSNIKSPQELTPSSQSEGVMLKNDD 73
Query: 120 SKAP---RSSGPW 129
S +P R S PW
Sbjct: 74 SMSPNQWRYSSPW 86
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 35.0 bits (79), Expect = 0.021
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 36 QEAQECNASPSSSGSGSSSFSSQTPASIKEEEGSPEKERPPE---------AEYINSRCV 86
Q+ E + S SSS SGSSS SS + +S E EG E ++ + +SR
Sbjct: 2551 QDGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAA 2610
Query: 87 LFTYFQGDISSVVDEHFSRALSQPSSYSPSCTSSKAPRSS 126
SS S + S SS S S +SS + SS
Sbjct: 2611 SPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2650
Score = 28.1 bits (61), Expect = 2.6
Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Query: 33 SKMQEAQECNASPSSSGSGSSSFSSQTPASIKEEEGSPEKERPPEAEYINSRCVLFTYFQ 92
S+ ++S SSS S SSS SS + +S S + +S +
Sbjct: 2607 SRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2666
Query: 93 GDISSVVDEHFSRALSQPSSYSPSCTSSKAPRSSGPWRARR 133
SS DE S S +P+ T+ + +++ P +A +
Sbjct: 2667 SSSSSTTDEDSS--CSSDDEAAPAPTAGPSAQAALPTKATK 2705
>gi|45827771 autoantigen RCD8 [Homo sapiens]
Length = 1401
Score = 34.3 bits (77), Expect = 0.036
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 30 AYYSKMQEAQECNASPSSSGSGSSSFSSQTPASIKEEEG-------SPEKERPPE 77
A+ + Q+ ASPSSS SGSSS SS + +S+ P RPPE
Sbjct: 597 AFMTPSASLQQITASPSSSSSGSSSSSSSSSSSLTAVSAMSSTSAVDPSLTRPPE 651
>gi|27477113 sterol regulatory element-binding transcription factor
2 [Homo sapiens]
Length = 1141
Score = 32.7 bits (73), Expect = 0.11
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 27/87 (31%)
Query: 39 QECNASPSSSGSGSSSFSSQTPASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSV 98
Q C++ P S GSGSSS SS + +S GS S
Sbjct: 49 QLCSSFPGSGGSGSSSGSSGSSSSSSNGRGSS-------------------------SGA 83
Query: 99 VDEHFSRALSQPS--SYSPSCTSSKAP 123
VD R+ +Q + S+SPS S +AP
Sbjct: 84 VDPSVQRSFTQVTLPSFSPSAASPQAP 110
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 32.3 bits (72), Expect = 0.14
Identities = 37/140 (26%), Positives = 53/140 (37%), Gaps = 19/140 (13%)
Query: 12 GPPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSS-------------- 57
G QP AA P ++ + S + ++S SSS S SSS SS
Sbjct: 2514 GAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPE 2573
Query: 58 ----QTPASIKEEEGSPEKERPPE-AEYINSRCVLFTYFQGDISSVVDEHFSRALSQPSS 112
+ P+ + + + RPPE R + SS S + S SS
Sbjct: 2574 VALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSS 2633
Query: 113 YSPSCTSSKAPRSSGPWRAR 132
S S +SS + SS P A+
Sbjct: 2634 SSSSSSSSSSSSSSSPSPAK 2653
Score = 30.0 bits (66), Expect = 0.69
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 13 PPQPYFAAAYTPYHQKL---AYYSKMQEAQECNASPSSSGSGSSSFSSQTPASIKEEEGS 69
PP+P TP +K + S + ++S SSS S SSS SS + +S S
Sbjct: 2595 PPEP------TPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2648
Query: 70 PEKERP-PEA 78
P +P P+A
Sbjct: 2649 PSPAKPGPQA 2658
Score = 27.7 bits (60), Expect = 3.4
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Query: 33 SKMQEAQECNASPSSSGSGSSSFSSQTPASIK------EEEGSPEKERPPE 77
S + ++S SSS S SSS SS +P+ K + SP+K P E
Sbjct: 2622 SSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGE 2672
>gi|169218320 PREDICTED: similar to BCL2-associated transcription
factor 1 isoform 2 [Homo sapiens]
Length = 869
Score = 32.0 bits (71), Expect = 0.18
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 33 SKMQEAQECNASPSSSGSGSSSFSSQTPAS---------IKEEEGSPEKERPPEAEYINS 83
S+ + + + SP SS S SSS S++P S K+ EG P++E P +++ S
Sbjct: 125 SRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSK---S 181
Query: 84 RCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCT----SSKAPRSSGP 128
+ F+ D S +DE F+++ + P + S ++P S P
Sbjct: 182 QEEPKDTFEHDPSESIDE-FNKSSATSGDIWPGLSAYDNSPRSPHSPSP 229
>gi|117938254 BCL2-associated transcription factor 1 isoform 3 [Homo
sapiens]
Length = 747
Score = 32.0 bits (71), Expect = 0.18
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 33 SKMQEAQECNASPSSSGSGSSSFSSQTPAS---------IKEEEGSPEKERPPEAEYINS 83
S+ + + + SP SS S SSS S++P S K+ EG P++E P +++ S
Sbjct: 127 SRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSK---S 183
Query: 84 RCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCT----SSKAPRSSGP 128
+ F+ D S +DE F+++ + P + S ++P S P
Sbjct: 184 QEEPKDTFEHDPSESIDE-FNKSSATSGDIWPGLSAYDNSPRSPHSPSP 231
>gi|117938251 BCL2-associated transcription factor 1 isoform 2 [Homo
sapiens]
Length = 869
Score = 32.0 bits (71), Expect = 0.18
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 33 SKMQEAQECNASPSSSGSGSSSFSSQTPAS---------IKEEEGSPEKERPPEAEYINS 83
S+ + + + SP SS S SSS S++P S K+ EG P++E P +++ S
Sbjct: 125 SRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSK---S 181
Query: 84 RCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCT----SSKAPRSSGP 128
+ F+ D S +DE F+++ + P + S ++P S P
Sbjct: 182 QEEPKDTFEHDPSESIDE-FNKSSATSGDIWPGLSAYDNSPRSPHSPSP 229
>gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Homo
sapiens]
Length = 920
Score = 32.0 bits (71), Expect = 0.18
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 33 SKMQEAQECNASPSSSGSGSSSFSSQTPAS---------IKEEEGSPEKERPPEAEYINS 83
S+ + + + SP SS S SSS S++P S K+ EG P++E P +++ S
Sbjct: 127 SRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSK---S 183
Query: 84 RCVLFTYFQGDISSVVDEHFSRALSQPSSYSPSCT----SSKAPRSSGP 128
+ F+ D S +DE F+++ + P + S ++P S P
Sbjct: 184 QEEPKDTFEHDPSESIDE-FNKSSATSGDIWPGLSAYDNSPRSPHSPSP 231
>gi|167234419 thyroid hormone receptor associated protein 3 [Homo
sapiens]
Length = 955
Score = 31.2 bits (69), Expect = 0.31
Identities = 31/101 (30%), Positives = 39/101 (38%), Gaps = 20/101 (19%)
Query: 43 ASPSSSGSGSSSFSSQTPASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVDEH 102
+S S S S S S S KE++ S + RP +A N QGD ++
Sbjct: 157 SSSSRSSSNHSRVESSKRKSAKEKKSSSKDSRPSQAAGDN---------QGD--EAKEQT 205
Query: 103 FSRALSQPSSYSPSCTSSKAPRSSGPWRARRYSLCGASLLS 143
FS SQ +KA SS PW Y AS S
Sbjct: 206 FSGGTSQ---------DTKASESSKPWPDATYGTGSASRAS 237
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 30.4 bits (67), Expect = 0.53
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 42 NASPSSSGSGSSSFSSQTPASIKEEEGSPEKERP 75
++S SSS S SSS SS + +S E E+ERP
Sbjct: 1038 SSSSSSSSSSSSSSSSSSSSSESSSEDEEEEERP 1071
Score = 28.9 bits (63), Expect = 1.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 37 EAQECNASPSSSGSGSSSFSSQTPASIKEEEGSPEKERPPEA 78
+++ ++S SSS S SSS SS + +S + E+E P A
Sbjct: 1032 DSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEEERPAA 1073
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 30.4 bits (67), Expect = 0.53
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 21 AYTPYHQKLAYYSKMQEAQECNA-------SPSSSGSGSSSFS--SQTPASIKEEEGSPE 71
A+ P H K S QE +A + SS GS SS+ S S+T ++ KE+E S E
Sbjct: 1002 AHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSSSTQSAPSETASASKEKETSAE 1061
Query: 72 KER 74
K +
Sbjct: 1062 KSK 1064
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 30.4 bits (67), Expect = 0.53
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 21 AYTPYHQKLAYYSKMQEAQECNA-------SPSSSGSGSSSFS--SQTPASIKEEEGSPE 71
A+ P H K S QE +A + SS GS SS+ S S+T ++ KE+E S E
Sbjct: 1027 AHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSSSTQSAPSETASASKEKETSAE 1086
Query: 72 KER 74
K +
Sbjct: 1087 KSK 1089
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 30.4 bits (67), Expect = 0.53
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 21 AYTPYHQKLAYYSKMQEAQECNA-------SPSSSGSGSSSFS--SQTPASIKEEEGSPE 71
A+ P H K S QE +A + SS GS SS+ S S+T ++ KE+E S E
Sbjct: 1027 AHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSSSTQSAPSETASASKEKETSAE 1086
Query: 72 KER 74
K +
Sbjct: 1087 KSK 1089
>gi|78191787 early estrogen-induced gene 1 protein isoform a [Homo
sapiens]
Length = 384
Score = 30.4 bits (67), Expect = 0.53
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 20 AAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTPASIKEEEGSPEK-ERPPEA 78
+ Y+ H + + S + + N S SSS SG + + P + E PEK RPP
Sbjct: 240 SGYSTEHSRSSSLSDLTHRR--NTSTSSSASGGLGMTVEGPEGSEREHRPPEKPPRPPRP 297
Query: 79 EYINSR 84
+++ R
Sbjct: 298 LHLSDR 303
>gi|42558264 early estrogen-induced gene 1 protein isoform b [Homo
sapiens]
Length = 242
Score = 30.4 bits (67), Expect = 0.53
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 20 AAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTPASIKEEEGSPEK-ERPPEA 78
+ Y+ H + + S + + N S SSS SG + + P + E PEK RPP
Sbjct: 98 SGYSTEHSRSSSLSDLTHRR--NTSTSSSASGGLGMTVEGPEGSEREHRPPEKPPRPPRP 155
Query: 79 EYINSR 84
+++ R
Sbjct: 156 LHLSDR 161
>gi|31542667 transmembrane protein 40 [Homo sapiens]
Length = 233
Score = 30.4 bits (67), Expect = 0.53
Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Query: 36 QEAQECNASPSSSGSGSSSFSSQTPASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDI 95
QE E N S SSS S SSS SS + +S E S ++++ P A + R + Y G+
Sbjct: 42 QEQYERNKSSSSSSSSSSSSSSSSSSSSSE---SNDEDQQPRATGKHRRSLGAGYPHGNG 98
Query: 96 S--------SVVDEHFSRALSQPSSYSPSCTSSKAPRSSGP 128
S V+ + P PS S R S P
Sbjct: 99 SPGPGHGEPDVLKDELQLYGDAPGEVVPSGESGLRRRGSDP 139
Score = 27.7 bits (60), Expect = 3.4
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 23 TPYHQ---KLAYYSKMQ-EAQECNASPSSSGSGSSSFSSQTPASIKEEEGSP 70
T +H+ K +S+ Q E + ++S SSS S SSS SS + + +E+ P
Sbjct: 28 TDFHKQDGKAGLFSQEQYERNKSSSSSSSSSSSSSSSSSSSSSESNDEDQQP 79
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 30.0 bits (66), Expect = 0.69
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 33 SKMQEAQECNASPSSSGSGSSSFSSQTPASIKEEEGSPEKERPPEAEYINSR 84
S ++ C++S SSS S SSS SS + + + SP + Y + R
Sbjct: 1471 SSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYR 1522
Score = 28.5 bits (62), Expect = 2.0
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 23 TPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTPASIKEEEGSPEKER 74
+P H++ S + S SSS S SSS SS + +S + SP R
Sbjct: 1459 SPPHKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRR 1510
>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
Length = 1163
Score = 30.0 bits (66), Expect = 0.69
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 25 YHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTPASIKE--EEGSPEKERPP 76
+H + ++ + S SSSGS S S SS + + E + SPE E PP
Sbjct: 415 HHNSEGADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPP 468
>gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens]
Length = 1049
Score = 29.6 bits (65), Expect = 0.90
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 24 PYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTPASIKEEEGSPEKERPPEAE 79
PY + + ++ + + S+ S SSS +S AS EEE E+E E E
Sbjct: 337 PYMHRAGTLTSLESSHSVPSMSISASSQSSSVNSLADASDNEEEEEEEEEEEEEEE 392
>gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens]
Length = 1235
Score = 29.6 bits (65), Expect = 0.90
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 24 PYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTPASIKEEEGSPEKERPPEAE 79
PY + + ++ + + S+ S SSS +S AS EEE E+E E E
Sbjct: 337 PYMHRAGTLTSLESSHSVPSMSISASSQSSSVNSLADASDNEEEEEEEEEEEEEEE 392
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 29.6 bits (65), Expect = 0.90
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Query: 14 PQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTP------ASIKEEE 67
P P F +A++PY +A++ E A+ + SG + P KE+
Sbjct: 389 PAPGFKSAFSPYQTPVAHFPPPPEEPTATAAFGARDSGEFRRAPAPPPLPPAEPLAKEKP 448
Query: 68 GSPEKERPPE 77
G+P PP+
Sbjct: 449 GTPPGPPPPD 458
>gi|50083281 KIAA1853 protein [Homo sapiens]
Length = 611
Score = 29.6 bits (65), Expect = 0.90
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 3/125 (2%)
Query: 13 PPQPYFAAAYTPYHQKLAYYSKMQEAQECNASPSSSGSGSSSFSSQTPASIKEEEGSPEK 72
PP ++A + +K + + +++E N+ +S S + SS E SP
Sbjct: 294 PPSTQTSSARSRGQEKGSPSGGLSKSRELNSGNTSDSGNSFTTSSPQNKGAMLENLSPTS 353
Query: 73 ERPPEAEYINSRCVLFTYFQGD--ISSVVDEHFSRALSQPSSYSPSCTSSKAPRSSGPWR 130
R E+ S C+ + + S + S+ SSY+ + +SS + RS P
Sbjct: 354 -RGRESRGFQSPCLECAEVKKSSLVPSTARSSPMKGCSRSSSYASTRSSSHSSRSPNPRA 412
Query: 131 ARRYS 135
+ RY+
Sbjct: 413 SPRYT 417
>gi|110815815 centlein isoform 1 [Homo sapiens]
Length = 1406
Score = 29.6 bits (65), Expect = 0.90
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 10/98 (10%)
Query: 46 SSSGSGSSSFSSQTPASI---------KEEEGSPEKERPP-EAEYINSRCVLFTYFQGDI 95
S S S S + +SQT +I E+G +KE P E + ++ TY D
Sbjct: 869 SESSSDSEAQTSQTLGTIIVETSQKISPTEDGKDQKESDPTEDSQTQGKEIVQTYLNIDG 928
Query: 96 SSVVDEHFSRALSQPSSYSPSCTSSKAPRSSGPWRARR 133
+ D + +P+ +C K+ ++ P R R
Sbjct: 929 KTPKDYFHDKNAKKPTFQKKNCKMQKSSHTAVPTRVNR 966
>gi|50811873 suppressor of hairy wing homolog 4 isoform 2 [Homo
sapiens]
Length = 966
Score = 29.6 bits (65), Expect = 0.90
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 23/83 (27%)
Query: 46 SSSGSGSSSFSSQTPASIKEEEGSPEKERPPEA-EYINSRCVLFTYFQGDISSVVDEHFS 104
S +G SSF S+ P++ + +P+K +P E+ NS VL
Sbjct: 151 SMAGMSESSFLSKRPSTSEVNNVNPKKPKPSESVSGANSSAVL----------------- 193
Query: 105 RALSQPSSYSPSCTSSKAPRSSG 127
PS SPS TSS+A + G
Sbjct: 194 -----PSVKSPSVTSSQAMLAKG 211
>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
sapiens]
Length = 2881
Score = 29.6 bits (65), Expect = 0.90
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 33 SKMQEAQECNASPSSSGSGSSSFSSQTPASIKEEEGSPEKERPPEA 78
S + C+++ SSS S +SS SS + +S +E + E+ + E+
Sbjct: 2163 SSSSSSSSCSSASSSSSSSTSSSSSSSSSSSEESDSDEEEAQKRES 2208
>gi|50811871 suppressor of hairy wing homolog 4 isoform 1 [Homo
sapiens]
Length = 979
Score = 29.6 bits (65), Expect = 0.90
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 23/83 (27%)
Query: 46 SSSGSGSSSFSSQTPASIKEEEGSPEKERPPEA-EYINSRCVLFTYFQGDISSVVDEHFS 104
S +G SSF S+ P++ + +P+K +P E+ NS VL
Sbjct: 164 SMAGMSESSFLSKRPSTSEVNNVNPKKPKPSESVSGANSSAVL----------------- 206
Query: 105 RALSQPSSYSPSCTSSKAPRSSG 127
PS SPS TSS+A + G
Sbjct: 207 -----PSVKSPSVTSSQAMLAKG 224
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.124 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,090,158
Number of Sequences: 37866
Number of extensions: 344385
Number of successful extensions: 2603
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 2081
Number of HSP's gapped (non-prelim): 402
length of query: 143
length of database: 18,247,518
effective HSP length: 92
effective length of query: 51
effective length of database: 14,763,846
effective search space: 752956146
effective search space used: 752956146
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.