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Search of human proteins with 116174780
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116174780 SEC24 related gene family, member A [Homo sapiens]
(1093 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116174780 SEC24 related gene family, member A [Homo sapiens] 2199 0.0
gi|112382214 SEC24 (S. cerevisiae) homolog B isoform b [Homo sap... 1235 0.0
gi|112382212 SEC24 (S. cerevisiae) homolog B isoform a [Homo sap... 1229 0.0
gi|38373671 SEC24-related protein C [Homo sapiens] 395 e-109
gi|38373669 SEC24-related protein C [Homo sapiens] 395 e-109
gi|190343021 Sec24-related protein D [Homo sapiens] 357 3e-98
gi|14591924 Sec23 homolog B [Homo sapiens] 75 3e-13
gi|14591926 Sec23 homolog B [Homo sapiens] 75 3e-13
gi|14591928 Sec23 homolog B [Homo sapiens] 75 3e-13
gi|38202214 SEC23-related protein A [Homo sapiens] 67 9e-11
gi|54860079 nadrin isoform 1 [Homo sapiens] 65 3e-10
gi|54860105 nadrin isoform 2 [Homo sapiens] 65 3e-10
gi|150417989 cyclin K isoform 1 [Homo sapiens] 62 3e-09
gi|163965366 nascent polypeptide-associated complex alpha subuni... 62 3e-09
gi|151301154 mucin 6, gastric [Homo sapiens] 60 1e-08
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 59 2e-08
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 59 3e-08
gi|188497758 ubiquitin associated protein 2-like isoform a [Homo... 59 3e-08
gi|188497756 ubiquitin associated protein 2-like isoform b [Homo... 59 3e-08
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 58 4e-08
gi|116284392 mucin 2 precursor [Homo sapiens] 57 1e-07
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 56 2e-07
gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens] 55 5e-07
gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens] 55 5e-07
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 54 1e-06
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 54 1e-06
gi|31543543 retinoic acid induced 17 [Homo sapiens] 53 1e-06
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 52 3e-06
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 52 4e-06
gi|31543535 R3H domain containing 1 [Homo sapiens] 52 4e-06
>gi|116174780 SEC24 related gene family, member A [Homo sapiens]
Length = 1093
Score = 2199 bits (5698), Expect = 0.0
Identities = 1093/1093 (100%), Positives = 1093/1093 (100%)
Query: 1 MSQPGIPASGGAPASLQAQNGAALASGSPYTNGPVQNALLSSQESVSQGYNFQLPGSYPH 60
MSQPGIPASGGAPASLQAQNGAALASGSPYTNGPVQNALLSSQESVSQGYNFQLPGSYPH
Sbjct: 1 MSQPGIPASGGAPASLQAQNGAALASGSPYTNGPVQNALLSSQESVSQGYNFQLPGSYPH 60
Query: 61 PIPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTP 120
PIPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTP
Sbjct: 61 PIPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTP 120
Query: 121 MPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPS 180
MPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPS
Sbjct: 121 MPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPS 180
Query: 181 LQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQPLFN 240
LQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQPLFN
Sbjct: 181 LQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQPLFN 240
Query: 241 SAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQ 300
SAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQ
Sbjct: 241 SAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQ 300
Query: 301 NTTPPGATGVPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQPEGLRVVNLLQERNML 360
NTTPPGATGVPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQPEGLRVVNLLQERNML
Sbjct: 301 NTTPPGATGVPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQPEGLRVVNLLQERNML 360
Query: 361 PSTPLKPPVPNLHEDIQKLNCNPELFRCTLTSIPQTQALLNKAKLPLGLLLHPFKDLVQL 420
PSTPLKPPVPNLHEDIQKLNCNPELFRCTLTSIPQTQALLNKAKLPLGLLLHPFKDLVQL
Sbjct: 361 PSTPLKPPVPNLHEDIQKLNCNPELFRCTLTSIPQTQALLNKAKLPLGLLLHPFKDLVQL 420
Query: 421 PVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFLYNPLTRVYGEPHRR 480
PVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFLYNPLTRVYGEPHRR
Sbjct: 421 PVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFLYNPLTRVYGEPHRR 480
Query: 481 PEVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAVETGYLNSVCQSLLDNLDLLPGNT 540
PEVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAVETGYLNSVCQSLLDNLDLLPGNT
Sbjct: 481 PEVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAVETGYLNSVCQSLLDNLDLLPGNT 540
Query: 541 RTKIGFITFDSTIHFYGLQESLSQPQMLIVSDIEDVFIPMPENLLVNLNESKELVQDLLK 600
RTKIGFITFDSTIHFYGLQESLSQPQMLIVSDIEDVFIPMPENLLVNLNESKELVQDLLK
Sbjct: 541 RTKIGFITFDSTIHFYGLQESLSQPQMLIVSDIEDVFIPMPENLLVNLNESKELVQDLLK 600
Query: 601 TLPQMFTKTLETQSALGPALQAAFKLMSPTGGRMSVFQTQLPTLGVGALKPREEPNHRSS 660
TLPQMFTKTLETQSALGPALQAAFKLMSPTGGRMSVFQTQLPTLGVGALKPREEPNHRSS
Sbjct: 601 TLPQMFTKTLETQSALGPALQAAFKLMSPTGGRMSVFQTQLPTLGVGALKPREEPNHRSS 660
Query: 661 AKDIHMTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYSAGSVYYYPSYH 720
AKDIHMTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYSAGSVYYYPSYH
Sbjct: 661 AKDIHMTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYSAGSVYYYPSYH 720
Query: 721 HQHNPVQVQKLQKELQRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVN 780
HQHNPVQVQKLQKELQRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVN
Sbjct: 721 HQHNPVQVQKLQKELQRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVN 780
Query: 781 PDAGYAVQMSVEESLTDTQLVSFQSALLYTSSKGERRIRVHTLCLPVVSTLNDVFLGADV 840
PDAGYAVQMSVEESLTDTQLVSFQSALLYTSSKGERRIRVHTLCLPVVSTLNDVFLGADV
Sbjct: 781 PDAGYAVQMSVEESLTDTQLVSFQSALLYTSSKGERRIRVHTLCLPVVSTLNDVFLGADV 840
Query: 841 QAISGLLANMAVDRSMTASLSDARDALVNAVIDSLSAYRSSVLSNQQPGLMVPFSLRLFP 900
QAISGLLANMAVDRSMTASLSDARDALVNAVIDSLSAYRSSVLSNQQPGLMVPFSLRLFP
Sbjct: 841 QAISGLLANMAVDRSMTASLSDARDALVNAVIDSLSAYRSSVLSNQQPGLMVPFSLRLFP 900
Query: 901 LFVLALLKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNI 960
LFVLALLKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNI
Sbjct: 901 LFVLALLKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNI 960
Query: 961 SDRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQP 1020
SDRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQP
Sbjct: 961 SDRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQP 1020
Query: 1021 MTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMKANFLQNMIEDRTESALSY 1080
MTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMKANFLQNMIEDRTESALSY
Sbjct: 1021 MTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMKANFLQNMIEDRTESALSY 1080
Query: 1081 YEFLLHIQQQVNK 1093
YEFLLHIQQQVNK
Sbjct: 1081 YEFLLHIQQQVNK 1093
>gi|112382214 SEC24 (S. cerevisiae) homolog B isoform b [Homo sapiens]
Length = 1233
Score = 1235 bits (3195), Expect = 0.0
Identities = 663/1130 (58%), Positives = 814/1130 (72%), Gaps = 79/1130 (6%)
Query: 11 GAPASLQAQNGAALASGSPYTNGPVQNALLSSQESV-SQGYNFQLPGSYPHPIPAKTLNP 69
GA +S + +A S + N A+ S+ SV SQG+ P + H + N
Sbjct: 136 GAASSASHLHTSASQPYSSFVNHYNSPAMYSASSSVASQGF----PSTCGHYAMSTVSNA 191
Query: 70 VSGQSNY-----GGSQGSGQTLNRPPVASNPVTPSLHSG-------PAPRMPLPASQNPA 117
+Y G + G T P PV + SG P+P PLP+ Q+
Sbjct: 192 AYPSVSYPSLPAGDTYGQMFTSQNAPTV-RPVKDNSFSGQNTAISHPSPLPPLPSQQHHQ 250
Query: 118 TTPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSG 177
+ S L ++ P + Q N + T A++ PT++ SL+
Sbjct: 251 QQSLSGYSTLTWSSPGLP-STQDNL--IRNHTGSLAVANNNPTITVADSLSC-------- 299
Query: 178 YPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQP 237
P +QN P P+V+ L + + PP A P + P+TS V QP
Sbjct: 300 -PVMQNV---QPPKSSPVVSTVLSGSSGSSSTRTPPTANHP-----VEPVTS----VTQP 346
Query: 238 LFNSAVNQEGI-TSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNP-------------- 282
+ + Q+G+ +S+T + + + +SYD +EGG + +P
Sbjct: 347 --SELLQQKGVDSSSTTSSASPMPNSYDALEGGSYPDMLSSSASSPAPDPAPEPDPASAP 404
Query: 283 --------------KMSRSVGYSYPSLPPGYQNTTPPGATGVPPSSLNYPSGPQAFTQTP 328
KM++ GY YP+L PGYQN T P +GV PS+ Y SG Q + Q
Sbjct: 405 APASAPAPVVPQPSKMAKPFGYGYPTLQPGYQNATAPLISGVQPSNPVY-SGFQQYPQQY 463
Query: 329 LGANHLTTSMSGLSLQ----PEGLRVVNLLQERNMLPSTPLKPPVPNLHEDIQKLNCNPE 384
G N L++S+ GLSLQ PE LR VNL QERN+LP TP+ PVPNL+ D++KLNC+P+
Sbjct: 464 PGVNQLSSSIGGLSLQSSPQPESLRPVNLTQERNILPMTPVWAPVPNLNADLKKLNCSPD 523
Query: 385 LFRCTLTSIPQTQALLNKAKLPLGLLLHPFKDLVQLPVVTSSTIVRCRSCRTYINPFVSF 444
FRCTLT+IPQTQALLNKAKLPLGLLLHPF+DL QLPV+TS+TIVRCRSCRTYINPFVSF
Sbjct: 524 SFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNTIVRCRSCRTYINPFVSF 583
Query: 445 LDQRRWKCNLCYRVNDVPEEFLYNPLTRVYGEPHRRPEVQNATIEFMAPSEYMLRPPQPP 504
+DQRRWKCNLCYRVNDVPEEF+YNPLTR YGEPH+RPEVQN+T+EF+A S+YMLRPPQP
Sbjct: 584 IDQRRWKCNLCYRVNDVPEEFMYNPLTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQPA 643
Query: 505 VYLFVFDVSHNAVETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDSTIHFYGLQESLSQ 564
VYLFV DVSHNAVE GYL +CQSLL+NLD LPG++RT+IGF+TFDSTIHFY LQE LSQ
Sbjct: 644 VYLFVLDVSHNAVEAGYLTILCQSLLENLDKLPGDSRTRIGFMTFDSTIHFYNLQEGLSQ 703
Query: 565 PQMLIVSDIEDVFIPMPENLLVNLNESKELVQDLLKTLPQMFTKTLETQSALGPALQAAF 624
PQMLIVSDI+DVF+P P++LLVNL ESKEL++DLL LP MFT T ET SALGPALQAAF
Sbjct: 704 PQMLIVSDIDDVFLPTPDSLLVNLYESKELIKDLLNALPNMFTNTRETHSALGPALQAAF 763
Query: 625 KLMSPTGGRMSVFQTQLPTLGVGALKPREEPNHRSSAKDI-HMTPSTDFYKKLALDCSGQ 683
KLMSPTGGR+SVFQTQLP+LG G L+ RE+PN RSS K + H+ P+TDFYKKLALDCSGQ
Sbjct: 764 KLMSPTGGRVSVFQTQLPSLGAGLLQSREDPNQRSSTKVVQHLGPATDFYKKLALDCSGQ 823
Query: 684 QVAVDLFLLSGQYSDLASLGCISRYSAGSVYYYPSYHHQHNPVQVQKLQKELQRYLTRKI 743
Q AVDLFLLS QYSDLASL C+S+YSAG +YYYPS+H+ HNP Q +KLQK+L+RYLTRKI
Sbjct: 824 QTAVDLFLLSSQYSDLASLACMSKYSAGCIYYYPSFHYTHNPSQAEKLQKDLKRYLTRKI 883
Query: 744 GFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSF 803
GFEAVMRIRCTKGLS+HTFHGNFFVRSTDLLSL N+NPDAG+AVQ+S+EESLTDT LV F
Sbjct: 884 GFEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLANINPDAGFAVQLSIEESLTDTSLVCF 943
Query: 804 QSALLYTSSKGERRIRVHTLCLPVVSTLNDVFLGADVQAISGLLANMAVDRSMTASLSDA 863
Q+ALLYTSSKGERRIRVHTLCLPVVS+L DV+ G DVQA LLANMAVDRS+++SLSDA
Sbjct: 944 QTALLYTSSKGERRIRVHTLCLPVVSSLADVYAGVDVQAAICLLANMAVDRSVSSSLSDA 1003
Query: 864 RDALVNAVIDSLSAYRSSVLSNQQPGLMVPFSLRLFPLFVLALLKQKSFQTGTNARLDER 923
RDALVNAV+DSLSAY S+V + Q LM P SL+LFPL+VLALLKQK+F+TGT+ RLD+R
Sbjct: 1004 RDALVNAVVDSLSAYGSTVSNLQHSALMAPSSLKLFPLYVLALLKQKAFRTGTSTRLDDR 1063
Query: 924 IFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQLSVEKLSRDGA 983
++AMCQ+K+QPLV+LM HP+LYR+D L+DEGA++++DR +PQPP+ +LS EKL+R+GA
Sbjct: 1064 VYAMCQIKSQPLVHLMKMIHPNLYRIDRLTDEGAVHVNDRIVPQPPLQKLSAEKLTREGA 1123
Query: 984 FLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLR 1043
FLMD GSV +WVGK C NF+ VLG N+ASIPQ MT LPELDT S R +FI+WLR
Sbjct: 1124 FLMDCGSVFYIWVGKGCDNNFIEDVLGYTNFASIPQKMTHLPELDTLSSERARSFITWLR 1183
Query: 1044 EQRPFFPILYVIRDESPMKANFLQNMIEDRTESALSYYEFLLHIQQQVNK 1093
+ RP PIL++++DESP KA F Q++IEDRTE+A SYYEFLLH+QQQ+ K
Sbjct: 1184 DSRPLSPILHIVKDESPAKAEFFQHLIEDRTEAAFSYYEFLLHVQQQICK 1233
>gi|112382212 SEC24 (S. cerevisiae) homolog B isoform a [Homo sapiens]
Length = 1268
Score = 1229 bits (3180), Expect = 0.0
Identities = 663/1154 (57%), Positives = 818/1154 (70%), Gaps = 92/1154 (7%)
Query: 11 GAPASLQAQNGAALASGSPYTNGPVQNALLSSQESV-SQGYNFQLPGSYPHPIPAKTLNP 69
GA +S + +A S + N A+ S+ SV SQG+ P + H + N
Sbjct: 136 GAASSASHLHTSASQPYSSFVNHYNSPAMYSASSSVASQGF----PSTCGHYAMSTVSNA 191
Query: 70 VSGQSNY-----GGSQGSGQTLNRPPVASNPVTPSLHSG-------PAPRMPLPASQNPA 117
+Y G + G T P PV + SG P+P PLP+ Q+
Sbjct: 192 AYPSVSYPSLPAGDTYGQMFTSQNAPTV-RPVKDNSFSGQNTAISHPSPLPPLPSQQHHQ 250
Query: 118 TTPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSG 177
+ S L ++ P + Q N + T A++ PT++ SL+
Sbjct: 251 QQSLSGYSTLTWSSPGLP-STQDNL--IRNHTGSLAVANNNPTITVADSLSC-------- 299
Query: 178 YPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGP-PPVRALTP---------- 226
P +QN P P+V+ L + + PP A P PV ++T
Sbjct: 300 -PVMQNV---QPPKSSPVVSTVLSGSSGSSSTRTPPTANHPVEPVTSVTQPSELLQQKGV 355
Query: 227 -----LTSSYRDVPQPLFNSAVNQE--------GI-TSNTNNGSMVVHSSYDEIEGGGLL 272
+ + P PL +++ ++E G+ +S+T + + + +SYD +EGG
Sbjct: 356 QYGEYVNNQASSAPTPLSSTSDDEEEEEEDEEAGVDSSSTTSSASPMPNSYDALEGGSYP 415
Query: 273 ATPQLTNKNP----------------------------KMSRSVGYSYPSLPPGYQNTTP 304
+ +P KM++ GY YP+L PGYQN T
Sbjct: 416 DMLSSSASSPAPDPAPEPDPASAPAPASAPAPVVPQPSKMAKPFGYGYPTLQPGYQNATA 475
Query: 305 PGATGVPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQ----PEGLRVVNLLQERNML 360
P +GV PS+ Y SG Q + Q G N L++S+ GLSLQ PE LR VNL QERN+L
Sbjct: 476 PLISGVQPSNPVY-SGFQQYPQQYPGVNQLSSSIGGLSLQSSPQPESLRPVNLTQERNIL 534
Query: 361 PSTPLKPPVPNLHEDIQKLNCNPELFRCTLTSIPQTQALLNKAKLPLGLLLHPFKDLVQL 420
P TP+ PVPNL+ D++KLNC+P+ FRCTLT+IPQTQALLNKAKLPLGLLLHPF+DL QL
Sbjct: 535 PMTPVWAPVPNLNADLKKLNCSPDSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQL 594
Query: 421 PVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFLYNPLTRVYGEPHRR 480
PV+TS+TIVRCRSCRTYINPFVSF+DQRRWKCNLCYRVNDVPEEF+YNPLTR YGEPH+R
Sbjct: 595 PVITSNTIVRCRSCRTYINPFVSFIDQRRWKCNLCYRVNDVPEEFMYNPLTRSYGEPHKR 654
Query: 481 PEVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAVETGYLNSVCQSLLDNLDLLPGNT 540
PEVQN+T+EF+A S+YMLRPPQP VYLFV DVSHNAVE GYL +CQSLL+NLD LPG++
Sbjct: 655 PEVQNSTVEFIASSDYMLRPPQPAVYLFVLDVSHNAVEAGYLTILCQSLLENLDKLPGDS 714
Query: 541 RTKIGFITFDSTIHFYGLQESLSQPQMLIVSDIEDVFIPMPENLLVNLNESKELVQDLLK 600
RT+IGF+TFDSTIHFY LQE LSQPQMLIVSDI+DVF+P P++LLVNL ESKEL++DLL
Sbjct: 715 RTRIGFMTFDSTIHFYNLQEGLSQPQMLIVSDIDDVFLPTPDSLLVNLYESKELIKDLLN 774
Query: 601 TLPQMFTKTLETQSALGPALQAAFKLMSPTGGRMSVFQTQLPTLGVGALKPREEPNHRSS 660
LP MFT T ET SALGPALQAAFKLMSPTGGR+SVFQTQLP+LG G L+ RE+PN RSS
Sbjct: 775 ALPNMFTNTRETHSALGPALQAAFKLMSPTGGRVSVFQTQLPSLGAGLLQSREDPNQRSS 834
Query: 661 AKDI-HMTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYSAGSVYYYPSY 719
K + H+ P+TDFYKKLALDCSGQQ AVDLFLLS QYSDLASL C+S+YSAG +YYYPS+
Sbjct: 835 TKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCIYYYPSF 894
Query: 720 HHQHNPVQVQKLQKELQRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNV 779
H+ HNP Q +KLQK+L+RYLTRKIGFEAVMRIRCTKGLS+HTFHGNFFVRSTDLLSL N+
Sbjct: 895 HYTHNPSQAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLANI 954
Query: 780 NPDAGYAVQMSVEESLTDTQLVSFQSALLYTSSKGERRIRVHTLCLPVVSTLNDVFLGAD 839
NPDAG+AVQ+S+EESLTDT LV FQ+ALLYTSSKGERRIRVHTLCLPVVS+L DV+ G D
Sbjct: 955 NPDAGFAVQLSIEESLTDTSLVCFQTALLYTSSKGERRIRVHTLCLPVVSSLADVYAGVD 1014
Query: 840 VQAISGLLANMAVDRSMTASLSDARDALVNAVIDSLSAYRSSVLSNQQPGLMVPFSLRLF 899
VQA LLANMAVDRS+++SLSDARDALVNAV+DSLSAY S+V + Q LM P SL+LF
Sbjct: 1015 VQAAICLLANMAVDRSVSSSLSDARDALVNAVVDSLSAYGSTVSNLQHSALMAPSSLKLF 1074
Query: 900 PLFVLALLKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALN 959
PL+VLALLKQK+F+TGT+ RLD+R++AMCQ+K+QPLV+LM HP+LYR+D L+DEGA++
Sbjct: 1075 PLYVLALLKQKAFRTGTSTRLDDRVYAMCQIKSQPLVHLMKMIHPNLYRIDRLTDEGAVH 1134
Query: 960 ISDRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQ 1019
++DR +PQPP+ +LS EKL+R+GAFLMD GSV +WVGK C NF+ VLG N+ASIPQ
Sbjct: 1135 VNDRIVPQPPLQKLSAEKLTREGAFLMDCGSVFYIWVGKGCDNNFIEDVLGYTNFASIPQ 1194
Query: 1020 PMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMKANFLQNMIEDRTESALS 1079
MT LPELDT S R +FI+WLR+ RP PIL++++DESP KA F Q++IEDRTE+A S
Sbjct: 1195 KMTHLPELDTLSSERARSFITWLRDSRPLSPILHIVKDESPAKAEFFQHLIEDRTEAAFS 1254
Query: 1080 YYEFLLHIQQQVNK 1093
YYEFLLH+QQQ+ K
Sbjct: 1255 YYEFLLHVQQQICK 1268
>gi|38373671 SEC24-related protein C [Homo sapiens]
Length = 1094
Score = 395 bits (1015), Expect = e-109
Identities = 312/1130 (27%), Positives = 510/1130 (45%), Gaps = 144/1130 (12%)
Query: 7 PASGGAPASLQAQNGAALASGSPYTNGPVQNALLSSQESVSQGYNFQLPGSYPHPIPAKT 66
P S GAP + AQ A+ + G VQN S+ + +LPGS P P
Sbjct: 63 PPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQ------RLPGSQPFGSP--- 113
Query: 67 LNPVSGQ----SNYGGSQGSGQTLNR-------PPVASNPVTPSLHSGPAPRMPLPASQN 115
L PV Q YG S Q + VA P + L GP P S
Sbjct: 114 LAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGP------PTSLA 167
Query: 116 PATTPMPSSSFL---PEANLPPPLNWQYNYPSTASQTNHCPRASSQ--PTVSGNTSLTTN 170
A+ P+S P+ PP L+ +P + P +S P SG
Sbjct: 168 SASGSFPNSGLYGSYPQGQAPP-LSQAQGHPGIQTPQRSAPSQASSFTPPASG------- 219
Query: 171 HQYVSSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSS 230
GP +P + P LP G P PP +AL P T
Sbjct: 220 ------------------GPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPP-QALPPGTQM 260
Query: 231 YRDV-PQPLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVG 289
+ P P +S Q+ NGS G PQ P
Sbjct: 261 TGPLGPLPPMHSP--QQPGYQPQQNGSF------------GPARGPQSNYGGP------- 299
Query: 290 YSYPSLPPGYQNTTPPGATGVPPSSLNYPSGPQAFTQTPLGANHLTTS--MSGLSLQPEG 347
YP+ P PP +PP L+ + P N+ T ++G+ Q
Sbjct: 300 --YPAAPTFGSQPGPPQP--LPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVTGVRGQVPP 355
Query: 348 LRVVNLLQERNMLPSTPLKPPVPNLHEDIQKLNCNPELFRCTLTSIPQTQALLNKAKLPL 407
L N L + + N +P RCT +IP T + +A++PL
Sbjct: 356 LVTTNFLVK--------------------DQGNASPRYIRCTSYNIPCTSDMAKQAQVPL 395
Query: 408 GLLLHPFKDLVQLPVVTSSTIV---------RCRSCRTYINPFVSFLDQ-RRWKCNLCYR 457
++ P L +LP +S V RC C+ Y+ PF+ F++ RR++C C
Sbjct: 396 AAVIKP---LARLPPEEASPYVVDHGESGPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSC 452
Query: 458 VNDVPEEFLYN-PLTRVYGEPHRRPEVQNATIEFMAPSEYMLRP--PQPPVYLFVFDVSH 514
+NDVP ++ + T + + RPE+ + EF+A +Y P PP ++F+ DVS+
Sbjct: 453 INDVPPQYFQHLDHTGKRVDAYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSY 512
Query: 515 NAVETGYLNSVCQSLLDNLDLLPGN-----TRTKIGFITFDSTIHFYGLQESLSQPQMLI 569
NA+ TG + +C+ L LD LP + ++GF+T++ +HFY ++ SL+QPQM++
Sbjct: 513 NAIRTGLVRLLCEELKSLLDFLPREGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMV 572
Query: 570 VSDIEDVFIPMPENLLVNLNESKELVQDLLKTLPQMFTKTLETQSALGPALQAAFKLM-- 627
VSD+ D+F+P+ + LVN+NES+ ++ LL +P+MF T ET++ P +QA + +
Sbjct: 573 VSDVADMFVPLLDGFLVNVNESRAVITSLLDQIPEMFADTRETETVFVPVIQAGMEALKA 632
Query: 628 SPTGGRMSVFQTQLPTL-GVGALKPREEPNHRSSAKDIHM-TPSTDFYKKLALDCSGQQV 685
+ G++ +F T LP G LK R++ ++ K+ + P T Y+ LA +C Q
Sbjct: 633 AECAGKLFLFHTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTGAYQTLAKECVAQGC 692
Query: 686 AVDLFLLSGQYSDLASLGCISRYSAGSVYYYPSYHHQHNPVQVQKLQKELQRYLTRKIGF 745
VDLFL QY D+A+L + + + GSVY Y S+ +++ ++ +L+R + + +GF
Sbjct: 693 CVDLFLFPNQYVDVATLSVVPQLTGGSVYKYASFQVENDQ---ERFLSDLRRDVQKVVGF 749
Query: 746 EAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQS 805
+AVMR+R + G+ F G F++ +T + L ++ D V+ ++ L + Q
Sbjct: 750 DAVMRVRTSTGIRAVDFFGAFYMSNTTDVELAGLDGDKTVTVEFKHDDRLNEESGALLQC 809
Query: 806 ALLYTSSKGERRIRVHTLCLPVVSTLNDVFLGADVQAISGLLANMAVDRSMTASLSDARD 865
ALLYTS G+RR+R+H L L + L D++ + + +A A + + + RD
Sbjct: 810 ALLYTSCAGQRRLRIHNLALNCCTQLADLYRNCETDTLINYMAKFAYRGVLNSPVKAVRD 869
Query: 866 ALVNAVIDSLSAYRSSVLSNQQPG-LMVPFSLRLFPLFVLALLKQKSFQTGTNARLDERI 924
L+ L+ YR + S G L++P ++L P+++ +LK Q G D+R
Sbjct: 870 TLITQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGAEVTTDDRA 929
Query: 925 FAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQLSVEKLSRDGAF 984
+ V + + + +P L + E + +PP ++ S E+LS +
Sbjct: 930 YVRQLVTSMDVTETNVFFYPRLLPLTKSPVE--------STTEPPAVRASEERLSNGDIY 981
Query: 985 LMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLRE 1044
L++ G L LWVG + Q + + V +++ I ++ LP LD P S ++ I LR
Sbjct: 982 LLENGLNLFLWVGASVQQGVVQSLFSVSSFSQITSGLSVLPVLDNPLSKKVRGLIDSLRA 1041
Query: 1045 QRPFFPILYVIRDESPMKANFLQNMIEDRTES-ALSYYEFLLHIQQQVNK 1093
QR + L V++ E M+ F ++ED++ S SY +FL H+ +++ +
Sbjct: 1042 QRSRYMKLTVVKQEDKMEMLFKHFLVEDKSLSGGASYVDFLCHMHKEIRQ 1091
Score = 42.4 bits (98), Expect = 0.002
Identities = 52/171 (30%), Positives = 71/171 (41%), Gaps = 26/171 (15%)
Query: 4 PGIPASG---GAPASLQAQNGAALASG--SPYTNG---PVQNA-----LLSSQESV-SQG 49
P P+SG G P SL + +G+ SG Y G P+ A + + Q S SQ
Sbjct: 151 PAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQA 210
Query: 50 YNFQLPGSYPHPIPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGP-APRM 108
+F P S +P+ T + GQS G S ++ PP A P T +GP P
Sbjct: 211 SSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQM--TGPLGPLP 268
Query: 109 PLPASQNPATTPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQP 159
P+ + Q P P + SF P P N+ YP+ P SQP
Sbjct: 269 PMHSPQQPGYQPQQNGSFGPARG--PQSNYGGPYPA-------APTFGSQP 310
>gi|38373669 SEC24-related protein C [Homo sapiens]
Length = 1094
Score = 395 bits (1015), Expect = e-109
Identities = 312/1130 (27%), Positives = 510/1130 (45%), Gaps = 144/1130 (12%)
Query: 7 PASGGAPASLQAQNGAALASGSPYTNGPVQNALLSSQESVSQGYNFQLPGSYPHPIPAKT 66
P S GAP + AQ A+ + G VQN S+ + +LPGS P P
Sbjct: 63 PPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQ------RLPGSQPFGSP--- 113
Query: 67 LNPVSGQ----SNYGGSQGSGQTLNR-------PPVASNPVTPSLHSGPAPRMPLPASQN 115
L PV Q YG S Q + VA P + L GP P S
Sbjct: 114 LAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGP------PTSLA 167
Query: 116 PATTPMPSSSFL---PEANLPPPLNWQYNYPSTASQTNHCPRASSQ--PTVSGNTSLTTN 170
A+ P+S P+ PP L+ +P + P +S P SG
Sbjct: 168 SASGSFPNSGLYGSYPQGQAPP-LSQAQGHPGIQTPQRSAPSQASSFTPPASG------- 219
Query: 171 HQYVSSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSS 230
GP +P + P LP G P PP +AL P T
Sbjct: 220 ------------------GPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPP-QALPPGTQM 260
Query: 231 YRDV-PQPLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVG 289
+ P P +S Q+ NGS G PQ P
Sbjct: 261 TGPLGPLPPMHSP--QQPGYQPQQNGSF------------GPARGPQSNYGGP------- 299
Query: 290 YSYPSLPPGYQNTTPPGATGVPPSSLNYPSGPQAFTQTPLGANHLTTS--MSGLSLQPEG 347
YP+ P PP +PP L+ + P N+ T ++G+ Q
Sbjct: 300 --YPAAPTFGSQPGPPQP--LPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVTGVRGQVPP 355
Query: 348 LRVVNLLQERNMLPSTPLKPPVPNLHEDIQKLNCNPELFRCTLTSIPQTQALLNKAKLPL 407
L N L + + N +P RCT +IP T + +A++PL
Sbjct: 356 LVTTNFLVK--------------------DQGNASPRYIRCTSYNIPCTSDMAKQAQVPL 395
Query: 408 GLLLHPFKDLVQLPVVTSSTIV---------RCRSCRTYINPFVSFLDQ-RRWKCNLCYR 457
++ P L +LP +S V RC C+ Y+ PF+ F++ RR++C C
Sbjct: 396 AAVIKP---LARLPPEEASPYVVDHGESGPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSC 452
Query: 458 VNDVPEEFLYN-PLTRVYGEPHRRPEVQNATIEFMAPSEYMLRP--PQPPVYLFVFDVSH 514
+NDVP ++ + T + + RPE+ + EF+A +Y P PP ++F+ DVS+
Sbjct: 453 INDVPPQYFQHLDHTGKRVDAYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSY 512
Query: 515 NAVETGYLNSVCQSLLDNLDLLPGN-----TRTKIGFITFDSTIHFYGLQESLSQPQMLI 569
NA+ TG + +C+ L LD LP + ++GF+T++ +HFY ++ SL+QPQM++
Sbjct: 513 NAIRTGLVRLLCEELKSLLDFLPREGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMV 572
Query: 570 VSDIEDVFIPMPENLLVNLNESKELVQDLLKTLPQMFTKTLETQSALGPALQAAFKLM-- 627
VSD+ D+F+P+ + LVN+NES+ ++ LL +P+MF T ET++ P +QA + +
Sbjct: 573 VSDVADMFVPLLDGFLVNVNESRAVITSLLDQIPEMFADTRETETVFVPVIQAGMEALKA 632
Query: 628 SPTGGRMSVFQTQLPTL-GVGALKPREEPNHRSSAKDIHM-TPSTDFYKKLALDCSGQQV 685
+ G++ +F T LP G LK R++ ++ K+ + P T Y+ LA +C Q
Sbjct: 633 AECAGKLFLFHTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTGAYQTLAKECVAQGC 692
Query: 686 AVDLFLLSGQYSDLASLGCISRYSAGSVYYYPSYHHQHNPVQVQKLQKELQRYLTRKIGF 745
VDLFL QY D+A+L + + + GSVY Y S+ +++ ++ +L+R + + +GF
Sbjct: 693 CVDLFLFPNQYVDVATLSVVPQLTGGSVYKYASFQVENDQ---ERFLSDLRRDVQKVVGF 749
Query: 746 EAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQS 805
+AVMR+R + G+ F G F++ +T + L ++ D V+ ++ L + Q
Sbjct: 750 DAVMRVRTSTGIRAVDFFGAFYMSNTTDVELAGLDGDKTVTVEFKHDDRLNEESGALLQC 809
Query: 806 ALLYTSSKGERRIRVHTLCLPVVSTLNDVFLGADVQAISGLLANMAVDRSMTASLSDARD 865
ALLYTS G+RR+R+H L L + L D++ + + +A A + + + RD
Sbjct: 810 ALLYTSCAGQRRLRIHNLALNCCTQLADLYRNCETDTLINYMAKFAYRGVLNSPVKAVRD 869
Query: 866 ALVNAVIDSLSAYRSSVLSNQQPG-LMVPFSLRLFPLFVLALLKQKSFQTGTNARLDERI 924
L+ L+ YR + S G L++P ++L P+++ +LK Q G D+R
Sbjct: 870 TLITQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGAEVTTDDRA 929
Query: 925 FAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQLSVEKLSRDGAF 984
+ V + + + +P L + E + +PP ++ S E+LS +
Sbjct: 930 YVRQLVTSMDVTETNVFFYPRLLPLTKSPVE--------STTEPPAVRASEERLSNGDIY 981
Query: 985 LMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLRE 1044
L++ G L LWVG + Q + + V +++ I ++ LP LD P S ++ I LR
Sbjct: 982 LLENGLNLFLWVGASVQQGVVQSLFSVSSFSQITSGLSVLPVLDNPLSKKVRGLIDSLRA 1041
Query: 1045 QRPFFPILYVIRDESPMKANFLQNMIEDRTES-ALSYYEFLLHIQQQVNK 1093
QR + L V++ E M+ F ++ED++ S SY +FL H+ +++ +
Sbjct: 1042 QRSRYMKLTVVKQEDKMEMLFKHFLVEDKSLSGGASYVDFLCHMHKEIRQ 1091
Score = 42.4 bits (98), Expect = 0.002
Identities = 52/171 (30%), Positives = 71/171 (41%), Gaps = 26/171 (15%)
Query: 4 PGIPASG---GAPASLQAQNGAALASG--SPYTNG---PVQNA-----LLSSQESV-SQG 49
P P+SG G P SL + +G+ SG Y G P+ A + + Q S SQ
Sbjct: 151 PAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQA 210
Query: 50 YNFQLPGSYPHPIPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGP-APRM 108
+F P S +P+ T + GQS G S ++ PP A P T +GP P
Sbjct: 211 SSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQM--TGPLGPLP 268
Query: 109 PLPASQNPATTPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQP 159
P+ + Q P P + SF P P N+ YP+ P SQP
Sbjct: 269 PMHSPQQPGYQPQQNGSFGPARG--PQSNYGGPYPA-------APTFGSQP 310
>gi|190343021 Sec24-related protein D [Homo sapiens]
Length = 1032
Score = 357 bits (917), Expect = 3e-98
Identities = 258/983 (26%), Positives = 453/983 (46%), Gaps = 95/983 (9%)
Query: 192 VPPLVNPPLPTTFQPGAPH--GPPPAG--GPPPVRALTPLTSSYRDVPQPLFNSAVNQEG 247
+PP PP P F H G PP GPPPV + + Y+ Q + ++
Sbjct: 57 LPPGPPPPGPHQFGQNGAHATGHPPQRFPGPPPVNNVASSHAPYQPSAQSSYPGPISTSS 116
Query: 248 ITSNTNNGSMVVHSSY-------DEIEGGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQ 300
+T + S + +SY + G L AT T P + LPP
Sbjct: 117 VTQLGSQLSAMQINSYGSGMAPPSQGPPGPLSATSLQTPPRPPQPSILQPGSQVLPPPPT 176
Query: 301 NTTPPGATGVP-----PSSLNYPSGPQAFTQTP------LGANHLTTS------MSGLSL 343
PGA+ +P P L+ P P A Q P LGA + M+G L
Sbjct: 177 TLNGPGASPLPLPMYRPDGLSGPPPPNAQYQPPPLPGQTLGAGYPPQQANSGPQMAGAQL 236
Query: 344 QPEG------LRVVNLLQERNMLPSTPLKPPVPNLHED---------------------- 375
G ++ Q + L + P+ + D
Sbjct: 237 SYPGGFPGGPAQMAGPPQPQKKLDPDSIPSPIQVIENDRASRGGQVYATNTRGQIPPLVT 296
Query: 376 ----IQKL-NCNPELFRCTLTSIPQTQALLNKAKLPLGLLLHPFKDL------VQLPVVT 424
IQ N +P RCT P T + +A++PL ++ PF + + L
Sbjct: 297 TDCMIQDQGNASPRFIRCTTYCFPCTSDMAKQAQIPLAAVIKPFATIPSNESPLYLVNHG 356
Query: 425 SSTIVRCRSCRTYINPFVSFLDQ-RRWKCNLCYRVNDVPEEFLYNPLTRVYG--EPHRRP 481
S VRC C+ Y+ PF+ F++ RR++C C VNDVP F + L + + + +P
Sbjct: 357 ESGPVRCNRCKAYMCPFMQFIEGGRRYQCGFCNCVNDVPP-FYFQHLDHIGRRLDHYEKP 415
Query: 482 EVQNATIEFMAPSEYMLR--PPQPPVYLFVFDVSHNAVETGYLNSVCQSLLDNLDLLPGN 539
E+ + E++A +Y + PP PP ++F+ DVS++ ++ G + +C+ L L+ +P
Sbjct: 416 ELSLGSYEYVATLDYCRKSKPPNPPAFIFMIDVSYSNIKNGLVKLICEELKTMLEKIPKE 475
Query: 540 TRT-----KIGFITFDSTIHFYGLQESLSQPQMLIVSDIEDVFIPMPENLLVNLNESKEL 594
+ ++GFIT++ +HF+ ++ +L+QPQM++V+D+ +VF+P+ + LVN ES+ +
Sbjct: 476 EQEETSAIRVGFITYNKVLHFFNVKSNLAQPQMMVVTDVGEVFVPLLDGFLVNYQESQSV 535
Query: 595 VQDLLKTLPQMFTKTLETQSALGPALQAAFKLMSPTG--GRMSVFQTQLPTLGV-GALKP 651
+ +LL +P MF + E ++ P +QA + + G++ +F + LPT G LK
Sbjct: 536 IHNLLDQIPDMFADSNENETVFAPVIQAGMEALKAADCPGKLFIFHSSLPTAEAPGKLKN 595
Query: 652 REEPNHRSSAKD-IHMTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYSA 710
R++ ++ K+ I P T+ Y LA DC +V LFL QY D+ASLG + + +
Sbjct: 596 RDDKKLVNTDKEKILFQPQTNVYDSLAKDCVAHGCSVTLFLFPSQYVDVASLGLVPQLTG 655
Query: 711 GSVYYYPSYHHQHNPVQVQKLQKELQRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRS 770
G++Y Y ++ + Q+ +L+ + +KIGF+A+MR+R + G F G + +
Sbjct: 656 GTLYKYNNFQMH---LDRQQFLNDLRNDIEKKIGFDAIMRVRTSTGFRATDFFGGILMNN 712
Query: 771 TDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQSALLYTSSKGERRIRVHTLCLPVVST 830
T + + ++ D V+ ++ L++ Q A+LYT+ G+RR+R+H L L S
Sbjct: 713 TTDVEMAAIDCDKAVTVEFKHDDKLSEDSGALIQCAVLYTTISGQRRLRIHNLGLNCSSQ 772
Query: 831 LNDVFLGADVQAISGLLANMAVDRSMTASLSDARDALVNAVIDSLSAYRSSVLS-NQQPG 889
L D++ + A+ A A + L R+ LVN L+ YR + S +
Sbjct: 773 LADLYKSCETDALINFFAKSAFKAVLHQPLKVIREILVNQTAHMLACYRKNCASPSAASQ 832
Query: 890 LMVPFSLRLFPLFVLALLKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRV 949
L++P S+++ P+++ LLK + DER + V + L +P L +
Sbjct: 833 LILPDSMKVLPVYMNCLLKNCVLLSRPEISTDERAYQRQLVMTMGVADSQLFFYPQLLPI 892
Query: 950 DNLSDEGALNISDRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVL 1009
L + + P ++ S +LS +G FL+ G + LW+G + + +
Sbjct: 893 HTLDVKSTM--------LPAAVRCSESRLSEEGIFLLANGLHMFLWLGVSSPPELIQGIF 944
Query: 1010 GVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMKANFLQNM 1069
V ++A I MT LPE+ P S ++ + ++++RP+ L +++ + F Q +
Sbjct: 945 NVPSFAHINTDMTLLPEVGNPYSQQLRMIMGIIQQKRPYSMKLTIVKQREQPEMVFRQFL 1004
Query: 1070 IEDR-TESALSYYEFLLHIQQQV 1091
+ED+ SY +FL + +++
Sbjct: 1005 VEDKGLYGGSSYVDFLCCVHKEI 1027
>gi|14591924 Sec23 homolog B [Homo sapiens]
Length = 767
Score = 75.1 bits (183), Expect = 3e-13
Identities = 147/681 (21%), Positives = 255/681 (37%), Gaps = 109/681 (16%)
Query: 394 PQTQALLNKAKLPLGLLLHPFKDLVQLPVVTSSTIVRCR-SCRTYINPFVSFLDQRR--W 450
P ++ + +PL LL P K+ LP V ++ R +C+ +NP +D R W
Sbjct: 25 PSSRLEATRMVVPLACLLTPLKERPDLPPVQYEPVLCSRPTCKAVLNPLCQ-VDYRAKLW 83
Query: 451 KCNLCYRVNDVPEEFLYNPLTRVYGEPHRRPEVQNATIEFMAPSEYMLRPPQPP-VYLFV 509
CN C++ N P Y ++ V P Q +TIE++ + R Q P ++L+V
Sbjct: 84 ACNFCFQRNQFPP--AYGGISEVNQPAELMP--QFSTIEYV-----IQRGAQSPLIFLYV 134
Query: 510 FDVSHNAVETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDSTIHFYGLQ-ESLSQPQM- 567
D +E L ++ +SL +L LLP + +G ITF + + L E +S+ +
Sbjct: 135 VD---TCLEEDDLQALKESLQMSLSLLPPD--ALVGLITFGRMVQVHELSCEGISKSYVF 189
Query: 568 -----LIVSDIEDVF------IPMPE--------------NLLVNLNESKELVQDLLKTL 602
L I+D+ +PM + L +++ + DLL L
Sbjct: 190 RGTKDLTAKQIQDMLGLTKPAMPMQQARPAQPQEHPFASSRFLQPVHKIDMNLTDLLGEL 249
Query: 603 ---PQMFTKTLETQSALGPALQAAFKLMS----PTGGRMSVFQTQLPTLGVGALKPREEP 655
P T+ + G AL A L+ TG R+ +F PT G G + E
Sbjct: 250 QRDPWPVTQGKRPLRSTGVALSIAVGLLEGTFPNTGARIMLFTGGPPTQGPGMVVGDELK 309
Query: 656 NHRSSAKDIH------MTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYS 709
S DI M +T Y+ LA + +D++ + + L + C + +
Sbjct: 310 IPIRSWHDIEKDNARFMKKATKHYEMLANRTAANGHCIDIYACALDQTGLLEMKCCANLT 369
Query: 710 AGSVYYYPSYHHQHNPVQVQKLQKELQRYLTR------KIGFEAVMRIRCTKGLSIHTFH 763
G + S++ ++ QR T+ ++ F A + ++ ++ L I
Sbjct: 370 GGYMVMGDSFN-------TSLFKQTFQRIFTKDFNGDFRMAFGATLDVKTSRELKIAGAI 422
Query: 764 G---------------NFFVRSTDLLSLPNVNPDAGYAVQMSV----EESLTDTQLVSFQ 804
G V T + ++P + + V + + Q
Sbjct: 423 GPCVSLNVKGPCVSENELGVGGTSQWKICGLDPTSTLGIYFEVVNQHNTPIPQGGRGAIQ 482
Query: 805 SALLYTSSKGERRIRVHTLC---LPVVSTLNDVFLGADVQAISGLLANMAVDRSMTASLS 861
Y S +RRIRV T+ V S L + D +A + L+A + V R+ +
Sbjct: 483 FVTHYQHSSTQRRIRVTTIARNWADVQSQLRHIEAAFDQEAAAVLMARLGVFRAESEEGP 542
Query: 862 DARDALVNAVIDSLSAYRSSVLSNQQPGLMVPFSLRLFPLFVLALLKQKSFQTGTNARLD 921
D L +I + + S L+P F+ L + Q N+ D
Sbjct: 543 DVLRWLDRQLIRLCQKF-GQYNKEDPTSFRLSDSFSLYPQFMFHLRRSPFLQVFNNSP-D 600
Query: 922 ERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQLSVEKLSRD 981
E + Q L ++ P LY + S P+P +L S + D
Sbjct: 601 ESSYYRHHFARQDLTQSLIMIQPILY-----------SYSFHGPPEPVLLDSS--SILAD 647
Query: 982 GAFLMDAGSVLMLWVGKNCTQ 1002
LMD +++++G+ Q
Sbjct: 648 RILLMDTFFQIVIYLGETIAQ 668
>gi|14591926 Sec23 homolog B [Homo sapiens]
Length = 767
Score = 75.1 bits (183), Expect = 3e-13
Identities = 147/681 (21%), Positives = 255/681 (37%), Gaps = 109/681 (16%)
Query: 394 PQTQALLNKAKLPLGLLLHPFKDLVQLPVVTSSTIVRCR-SCRTYINPFVSFLDQRR--W 450
P ++ + +PL LL P K+ LP V ++ R +C+ +NP +D R W
Sbjct: 25 PSSRLEATRMVVPLACLLTPLKERPDLPPVQYEPVLCSRPTCKAVLNPLCQ-VDYRAKLW 83
Query: 451 KCNLCYRVNDVPEEFLYNPLTRVYGEPHRRPEVQNATIEFMAPSEYMLRPPQPP-VYLFV 509
CN C++ N P Y ++ V P Q +TIE++ + R Q P ++L+V
Sbjct: 84 ACNFCFQRNQFPP--AYGGISEVNQPAELMP--QFSTIEYV-----IQRGAQSPLIFLYV 134
Query: 510 FDVSHNAVETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDSTIHFYGLQ-ESLSQPQM- 567
D +E L ++ +SL +L LLP + +G ITF + + L E +S+ +
Sbjct: 135 VD---TCLEEDDLQALKESLQMSLSLLPPD--ALVGLITFGRMVQVHELSCEGISKSYVF 189
Query: 568 -----LIVSDIEDVF------IPMPE--------------NLLVNLNESKELVQDLLKTL 602
L I+D+ +PM + L +++ + DLL L
Sbjct: 190 RGTKDLTAKQIQDMLGLTKPAMPMQQARPAQPQEHPFASSRFLQPVHKIDMNLTDLLGEL 249
Query: 603 ---PQMFTKTLETQSALGPALQAAFKLMS----PTGGRMSVFQTQLPTLGVGALKPREEP 655
P T+ + G AL A L+ TG R+ +F PT G G + E
Sbjct: 250 QRDPWPVTQGKRPLRSTGVALSIAVGLLEGTFPNTGARIMLFTGGPPTQGPGMVVGDELK 309
Query: 656 NHRSSAKDIH------MTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYS 709
S DI M +T Y+ LA + +D++ + + L + C + +
Sbjct: 310 IPIRSWHDIEKDNARFMKKATKHYEMLANRTAANGHCIDIYACALDQTGLLEMKCCANLT 369
Query: 710 AGSVYYYPSYHHQHNPVQVQKLQKELQRYLTR------KIGFEAVMRIRCTKGLSIHTFH 763
G + S++ ++ QR T+ ++ F A + ++ ++ L I
Sbjct: 370 GGYMVMGDSFN-------TSLFKQTFQRIFTKDFNGDFRMAFGATLDVKTSRELKIAGAI 422
Query: 764 G---------------NFFVRSTDLLSLPNVNPDAGYAVQMSV----EESLTDTQLVSFQ 804
G V T + ++P + + V + + Q
Sbjct: 423 GPCVSLNVKGPCVSENELGVGGTSQWKICGLDPTSTLGIYFEVVNQHNTPIPQGGRGAIQ 482
Query: 805 SALLYTSSKGERRIRVHTLC---LPVVSTLNDVFLGADVQAISGLLANMAVDRSMTASLS 861
Y S +RRIRV T+ V S L + D +A + L+A + V R+ +
Sbjct: 483 FVTHYQHSSTQRRIRVTTIARNWADVQSQLRHIEAAFDQEAAAVLMARLGVFRAESEEGP 542
Query: 862 DARDALVNAVIDSLSAYRSSVLSNQQPGLMVPFSLRLFPLFVLALLKQKSFQTGTNARLD 921
D L +I + + S L+P F+ L + Q N+ D
Sbjct: 543 DVLRWLDRQLIRLCQKF-GQYNKEDPTSFRLSDSFSLYPQFMFHLRRSPFLQVFNNSP-D 600
Query: 922 ERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQLSVEKLSRD 981
E + Q L ++ P LY + S P+P +L S + D
Sbjct: 601 ESSYYRHHFARQDLTQSLIMIQPILY-----------SYSFHGPPEPVLLDSS--SILAD 647
Query: 982 GAFLMDAGSVLMLWVGKNCTQ 1002
LMD +++++G+ Q
Sbjct: 648 RILLMDTFFQIVIYLGETIAQ 668
>gi|14591928 Sec23 homolog B [Homo sapiens]
Length = 767
Score = 75.1 bits (183), Expect = 3e-13
Identities = 147/681 (21%), Positives = 255/681 (37%), Gaps = 109/681 (16%)
Query: 394 PQTQALLNKAKLPLGLLLHPFKDLVQLPVVTSSTIVRCR-SCRTYINPFVSFLDQRR--W 450
P ++ + +PL LL P K+ LP V ++ R +C+ +NP +D R W
Sbjct: 25 PSSRLEATRMVVPLACLLTPLKERPDLPPVQYEPVLCSRPTCKAVLNPLCQ-VDYRAKLW 83
Query: 451 KCNLCYRVNDVPEEFLYNPLTRVYGEPHRRPEVQNATIEFMAPSEYMLRPPQPP-VYLFV 509
CN C++ N P Y ++ V P Q +TIE++ + R Q P ++L+V
Sbjct: 84 ACNFCFQRNQFPP--AYGGISEVNQPAELMP--QFSTIEYV-----IQRGAQSPLIFLYV 134
Query: 510 FDVSHNAVETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDSTIHFYGLQ-ESLSQPQM- 567
D +E L ++ +SL +L LLP + +G ITF + + L E +S+ +
Sbjct: 135 VD---TCLEEDDLQALKESLQMSLSLLPPD--ALVGLITFGRMVQVHELSCEGISKSYVF 189
Query: 568 -----LIVSDIEDVF------IPMPE--------------NLLVNLNESKELVQDLLKTL 602
L I+D+ +PM + L +++ + DLL L
Sbjct: 190 RGTKDLTAKQIQDMLGLTKPAMPMQQARPAQPQEHPFASSRFLQPVHKIDMNLTDLLGEL 249
Query: 603 ---PQMFTKTLETQSALGPALQAAFKLMS----PTGGRMSVFQTQLPTLGVGALKPREEP 655
P T+ + G AL A L+ TG R+ +F PT G G + E
Sbjct: 250 QRDPWPVTQGKRPLRSTGVALSIAVGLLEGTFPNTGARIMLFTGGPPTQGPGMVVGDELK 309
Query: 656 NHRSSAKDIH------MTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYS 709
S DI M +T Y+ LA + +D++ + + L + C + +
Sbjct: 310 IPIRSWHDIEKDNARFMKKATKHYEMLANRTAANGHCIDIYACALDQTGLLEMKCCANLT 369
Query: 710 AGSVYYYPSYHHQHNPVQVQKLQKELQRYLTR------KIGFEAVMRIRCTKGLSIHTFH 763
G + S++ ++ QR T+ ++ F A + ++ ++ L I
Sbjct: 370 GGYMVMGDSFN-------TSLFKQTFQRIFTKDFNGDFRMAFGATLDVKTSRELKIAGAI 422
Query: 764 G---------------NFFVRSTDLLSLPNVNPDAGYAVQMSV----EESLTDTQLVSFQ 804
G V T + ++P + + V + + Q
Sbjct: 423 GPCVSLNVKGPCVSENELGVGGTSQWKICGLDPTSTLGIYFEVVNQHNTPIPQGGRGAIQ 482
Query: 805 SALLYTSSKGERRIRVHTLC---LPVVSTLNDVFLGADVQAISGLLANMAVDRSMTASLS 861
Y S +RRIRV T+ V S L + D +A + L+A + V R+ +
Sbjct: 483 FVTHYQHSSTQRRIRVTTIARNWADVQSQLRHIEAAFDQEAAAVLMARLGVFRAESEEGP 542
Query: 862 DARDALVNAVIDSLSAYRSSVLSNQQPGLMVPFSLRLFPLFVLALLKQKSFQTGTNARLD 921
D L +I + + S L+P F+ L + Q N+ D
Sbjct: 543 DVLRWLDRQLIRLCQKF-GQYNKEDPTSFRLSDSFSLYPQFMFHLRRSPFLQVFNNSP-D 600
Query: 922 ERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQLSVEKLSRD 981
E + Q L ++ P LY + S P+P +L S + D
Sbjct: 601 ESSYYRHHFARQDLTQSLIMIQPILY-----------SYSFHGPPEPVLLDSS--SILAD 647
Query: 982 GAFLMDAGSVLMLWVGKNCTQ 1002
LMD +++++G+ Q
Sbjct: 648 RILLMDTFFQIVIYLGETIAQ 668
>gi|38202214 SEC23-related protein A [Homo sapiens]
Length = 765
Score = 67.0 bits (162), Expect = 9e-11
Identities = 143/679 (21%), Positives = 253/679 (37%), Gaps = 107/679 (15%)
Query: 394 PQTQALLNKAKLPLGLLLHPFKDLVQLPVVTSSTIVRCRS-CRTYINPFVSFLDQRR--W 450
P ++ + +P+ L P K+ LP + ++ R+ CR +NP +D R W
Sbjct: 25 PSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLCSRTTCRAVLNPLCQ-VDYRAKLW 83
Query: 451 KCNLCYRVNDVPEEFLYNPLTRVYGEPHRRPEVQNATIEFMAPSEYMLRPPQPP-VYLFV 509
CN CY+ N P Y ++ + P Q ++IE++ +LR PQ P ++L+V
Sbjct: 84 ACNFCYQRNQFPPS--YAGISELNQPAELLP--QFSSIEYV-----VLRGPQMPLIFLYV 134
Query: 510 FDVSHNAVETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDSTIHFYGLQ-ESLSQ---- 564
D +E L ++ +S+ +L LLP +G ITF + + L E +S+
Sbjct: 135 VD---TCMEDEDLQALKESMQMSLSLLP--PTALVGLITFGRMVQVHELGCEGISKSYVF 189
Query: 565 -----------PQMLIVSDI--------EDVFIPMPENLLVNLNESKEL-VQDLLKTL-- 602
+ML +S + V P P N + + ++ + DLL L
Sbjct: 190 RGTKDLSAKQLQEMLGLSKVPLTQATRGPQVQQPPPSNRFLQPVQKIDMNLTDLLGELQR 249
Query: 603 -PQMFTKTLETQSALGPALQAAFKLMS----PTGGRMSVFQTQLPTLGVGALKPREEPNH 657
P + + G AL A L+ TG R+ +F T G G + E
Sbjct: 250 DPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGMVVGDELKTP 309
Query: 658 RSSAKDI------HMTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYSAG 711
S DI ++ T ++ LA + +D++ + + L + C + G
Sbjct: 310 IRSWHDIDKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEMKCCPNLTGG 369
Query: 712 SVYYYPSYHHQHNPVQVQKLQKELQRYLTR------KIGFEAVMRIRCTKGLSIHTFHG- 764
+ S++ ++ QR T+ K+GF + I+ ++ + I G
Sbjct: 370 YMVMGDSFN-------TSLFKQTFQRVFTKDMHGQFKMGFGGTLEIKTSREIKISGAIGP 422
Query: 765 --------------NFFVRSTDLLSLPNVNPDAGYAVQMSV----EESLTDTQLVSFQSA 806
T + ++P A+ V + + Q
Sbjct: 423 CVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQHNAPIPQGGRGAIQFV 482
Query: 807 LLYTSSKGERRIRVHTLC---LPVVSTLNDVFLGADVQAISGLLANMAVDRSMTASLSDA 863
Y S G+RRIRV T+ + + ++ D +A + L+A +A+ R+ T D
Sbjct: 483 TQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARLAIYRAETEEGPDV 542
Query: 864 RDALVNAVIDSLSAYRSSVLSNQQPGLMVPFSLRLFPLFVLALLKQKSFQTGTNARLDER 923
L +I + + + L+P F+ L++ SF N DE
Sbjct: 543 LRWLDRQLIRLCQKF-GEYHKDDPSSFRFSETFSLYPQFMFH-LRRSSFLQVFNNSPDES 600
Query: 924 IFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQLSVEKLSRDGA 983
+ Q L ++ P LY A + S P P+L L + D
Sbjct: 601 SYYRHHFMRQDLTQSLIMIQPILY---------AYSFSG---PPEPVL-LDSSSILADRI 647
Query: 984 FLMDAGSVLMLWVGKNCTQ 1002
LMD ++++ G+ Q
Sbjct: 648 LLMDTFFQILIYHGETIAQ 666
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 65.5 bits (158), Expect = 3e-10
Identities = 76/266 (28%), Positives = 98/266 (36%), Gaps = 30/266 (11%)
Query: 3 QPGIPASGGAPASLQAQNGAALASGSPYTNGPVQNALLSSQESVSQGYNFQLPGSY---- 58
+P P S PA +N + +ASG N P Q A S Q S+ Q +N P +
Sbjct: 578 KPKDPVSAAVPAP--GRNNSQIASGQ---NQP-QAAAGSHQLSMGQPHNAAGPSPHTLRR 631
Query: 59 ----PHPIPAKTLNPVSGQSNYGGSQGSGQ---TLNRPPVASNPVTPSLHSGPAPRMPLP 111
P P P K NP G S G+ Q +L+ P +P P+ H+G P P
Sbjct: 632 AVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSA 691
Query: 112 ASQNPATTPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNH 171
SQ + P SS L P N+P T P ++P G +
Sbjct: 692 PSQ--LSAPRRYSSSLSPIQAP-------NHPPPQPPTQATPLMHTKPNSQGPPNPMALP 742
Query: 172 QYVSSGYPSLQNSFIKSGPSVPPL--VNP--PLPTTFQPGAPHGPPPAGGPPPVRALTPL 227
PS + PS PPL NP P P T G P P G P P
Sbjct: 743 SEHGLEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVPK 802
Query: 228 TSSYRDVPQPLFNSAVNQEGITSNTN 253
+ VP P V+ G +S TN
Sbjct: 803 PRNRPSVPPPPQPPGVHSAGDSSLTN 828
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 65.5 bits (158), Expect = 3e-10
Identities = 76/266 (28%), Positives = 98/266 (36%), Gaps = 30/266 (11%)
Query: 3 QPGIPASGGAPASLQAQNGAALASGSPYTNGPVQNALLSSQESVSQGYNFQLPGSY---- 58
+P P S PA +N + +ASG N P Q A S Q S+ Q +N P +
Sbjct: 500 KPKDPVSAAVPAP--GRNNSQIASGQ---NQP-QAAAGSHQLSMGQPHNAAGPSPHTLRR 553
Query: 59 ----PHPIPAKTLNPVSGQSNYGGSQGSGQ---TLNRPPVASNPVTPSLHSGPAPRMPLP 111
P P P K NP G S G+ Q +L+ P +P P+ H+G P P
Sbjct: 554 AVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSA 613
Query: 112 ASQNPATTPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNH 171
SQ + P SS L P N+P T P ++P G +
Sbjct: 614 PSQ--LSAPRRYSSSLSPIQAP-------NHPPPQPPTQATPLMHTKPNSQGPPNPMALP 664
Query: 172 QYVSSGYPSLQNSFIKSGPSVPPL--VNP--PLPTTFQPGAPHGPPPAGGPPPVRALTPL 227
PS + PS PPL NP P P T G P P G P P
Sbjct: 665 SEHGLEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVPK 724
Query: 228 TSSYRDVPQPLFNSAVNQEGITSNTN 253
+ VP P V+ G +S TN
Sbjct: 725 PRNRPSVPPPPQPPGVHSAGDSSLTN 750
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 62.0 bits (149), Expect = 3e-09
Identities = 53/163 (32%), Positives = 70/163 (42%), Gaps = 24/163 (14%)
Query: 93 SNPVTPSLHSGPAPRMPLPASQNPATTPMP-SSSFLPEANLPPPLNWQYNYPSTASQTNH 151
++P P H P + PL A+ A P P ++ LP+ +PPP +P+ Q
Sbjct: 361 THPPLPPAHPPPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPPA-----HPAPVHQPPP 415
Query: 152 CP-RASSQPTVSGNTSLTTNHQYVSS-GYPSLQNSFIKSGPS---VPPLVNPPLPTTFQP 206
P R P S T ++T Y+S GY SLQ+ GPS +PP PP P
Sbjct: 416 LPHRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGPP---AHLP 472
Query: 207 GAPHGPPPAGGPPPV---------RALTPLTSSYRDVPQPLFN 240
PH PP PPPV A+ P T Y P P +N
Sbjct: 473 YHPHVYPPNPPPPPVPPPPASFPPPAIPPPTPGY-PPPPPTYN 514
Score = 42.4 bits (98), Expect = 0.002
Identities = 50/172 (29%), Positives = 63/172 (36%), Gaps = 24/172 (13%)
Query: 54 LPGSYPHPIPAKTLNPVSGQSNYGGSQG--SGQTLNRPPVASNPVTPSLHSGPA--PRMP 109
LP P P P+ + +S S+Y +G S Q++ + S P + PA P P
Sbjct: 416 LPHRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGPPAHLPYHP 475
Query: 110 --LPASQNPATTPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSL 167
P + P P P +SF P A +PPP YP N P P T
Sbjct: 476 HVYPPNPPPPPVPPPPASFPPPA-IPPPTP---GYPPPPPTYN--PNFPPPPPRLPPTHA 529
Query: 168 TTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPP 219
H G P S PP P +P QP P PP G PP
Sbjct: 530 VPPHPPPGLGLPPA---------SYPP---PAVPPGGQPPVPPPIPPPGMPP 569
Score = 39.3 bits (90), Expect = 0.021
Identities = 76/348 (21%), Positives = 106/348 (30%), Gaps = 65/348 (18%)
Query: 62 IPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPM 121
+P L + Q SQG Q + P PSL P P++P P+ +
Sbjct: 242 VPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQ-PPSLQ--PTPQVPQVQQSQPSQSSE 298
Query: 122 PSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSL 181
PS + P P S PR + V + P +
Sbjct: 299 PSQPQQKDPQQPAQQQQPAQQPKKPSPQPSSPRQVKRAVVVSPKEENKAAEPPPPKIPKI 358
Query: 182 QNSFIKSGPSVPPLVN-PPLPTTFQPGAPHGP-----------PPAGGPPPVRALTPLTS 229
+ + P+ PP PPL P GP PP P PV PL
Sbjct: 359 ETTHPPLPPAHPPPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVHQPPPLP- 417
Query: 230 SYRDVPQPLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVG 289
+R P P ++ M SSY EG L + M ++ G
Sbjct: 418 -HRPPPPP------------PSSYMTGMSTTSSYMSGEGYQSLQS---------MMKTEG 455
Query: 290 YSYPSLPPGY--------------QNTTPPGA---------TGVPPSSLNYPSGPQAFTQ 326
SY +LPP Y N PP +PP + YP P +
Sbjct: 456 PSYGALPPAYGPPAHLPYHPHVYPPNPPPPPVPPPPASFPPPAIPPPTPGYPPPPPTYNP 515
Query: 327 T-PLGANHLTTSMSGLSLQPEGLRVVNLLQERNMLP---STPLKPPVP 370
P L + + P GL + +P P+ PP+P
Sbjct: 516 NFPPPPPRLPPTHAVPPHPPPGLGLPPASYPPPAVPPGGQPPVPPPIP 563
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 62.0 bits (149), Expect = 3e-09
Identities = 91/347 (26%), Positives = 125/347 (36%), Gaps = 71/347 (20%)
Query: 4 PGIPASGGAPASLQAQNGAALASGSPYTNGPVQNALLSSQESVSQGYNFQLPGSYPHPIP 63
P PA APA + A +P G +P S P P
Sbjct: 900 PATPAPKQAPALSMTSSSPKKARATPAPKG--------------------IPAS-PSPKG 938
Query: 64 AKTLNPVSGQSNYGG-SQGSGQTLNRPPVAS------NPVTPSLHSGPAPRMPLPAS-QN 115
A T + S GG + S + PP A+ P TPS P P P S +
Sbjct: 939 APTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKG 998
Query: 116 PATTPMPSSSFLPEANLPPPLNWQ---YNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQ 172
TP P + P A PP +P AS P A++ P+ G+ + T
Sbjct: 999 GPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGAST----PPAATPPSPKGSPAATP--- 1051
Query: 173 YVSSGYPSLQNSFI---KSGPSVPPLVNPPLPTTFQPGAPHG----PPPAGGPPPVRALT 225
+ G P+ + + K GP+ P L P P P +P G P P G P P A T
Sbjct: 1052 -LPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMP-PAAT 1109
Query: 226 PLTSSYRDVPQPLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMS 285
P P P + G+ + + G+ ++ GGL P PK +
Sbjct: 1110 P--------PSP-------KGGLATPPHKGAPTTPAATPPSPKGGLATPP------PKGA 1148
Query: 286 RSVGYSYPSLPPGYQNTTPP-GATGVPPSSLNYPSGPQAFTQTPLGA 331
+ + P P G T PP GA P ++ P G A T +P GA
Sbjct: 1149 PTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLA-TPSPKGA 1194
Score = 50.1 bits (118), Expect = 1e-05
Identities = 64/260 (24%), Positives = 80/260 (30%), Gaps = 29/260 (11%)
Query: 89 PPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSSSFLPEANLPPPLNWQYNYPSTASQ 148
P +P PS P P P S T P + NLP P P+T
Sbjct: 850 PATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEG----PAT--- 902
Query: 149 TNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQPGA 208
P P +S TS + + + S G PP PP P G
Sbjct: 903 ----PAPKQAPALS-MTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSP----KGG 953
Query: 209 PHGPPPAGGPPPVRALTPLTSSYRDVPQPLFNSAVNQEGITSNTNNGSMVVHSSYDEIEG 268
P P P P P A P P P A T + G S
Sbjct: 954 PATPSPKWAPTPPAATPPSPKGGPATPSP--KGAPTPPAATPPSPKGGPATPSP------ 1005
Query: 269 GGLLATPQLTNKNPKMSRSVGYSYP---SLPPGYQNTTPPGATGVPPSSLNYPSGPQAFT 325
G P +T +PK S +P S PP +P G+ P P+ P A
Sbjct: 1006 KGAPTPPAVTPPSPKGS-PAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATL 1064
Query: 326 QTPLGANHLTTSMSGLSLQP 345
+P G T S+ G P
Sbjct: 1065 PSPKG-GPATPSLKGAPTPP 1083
Score = 47.8 bits (112), Expect = 6e-05
Identities = 77/291 (26%), Positives = 98/291 (33%), Gaps = 53/291 (18%)
Query: 59 PHPIPAKTLNPVSGQSNYGGSQGSGQT-----LNRPPVASNPVTPSLHSGPAPRM----P 109
P P A T + V+ S G + +T +N P P TP+ PA M P
Sbjct: 859 PSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSP 918
Query: 110 LPASQNPA-----TTPMPSSSFLPEANLPPPLNWQYNYPSTAS-QTNHCPRASSQPTVSG 163
A PA +P P + P A PP P+T S + P A++ P+ G
Sbjct: 919 KKARATPAPKGIPASPSPKGAPTPPAATPPS---PKGGPATPSPKWAPTPPAATPPSPKG 975
Query: 164 NTSLTTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRA 223
+ + G PP PP P G P P P G P P A
Sbjct: 976 GPATPS-----------------PKGAPTPPAATPPSP----KGGPATPSPKGAPTP-PA 1013
Query: 224 LTPLTSSYRDVPQPLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPK 283
+TP + P A T + GS G TP T +PK
Sbjct: 1014 VTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPL-----PKGAPTTPAATLPSPK 1068
Query: 284 MSRSVGYSYPSL--PPGYQNTTPPGATGVP--PSSLNYPSGPQAFTQTPLG 330
G + PSL P TPP G P PS P P A +P G
Sbjct: 1069 ----GGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKG 1115
Score = 47.0 bits (110), Expect = 1e-04
Identities = 72/327 (22%), Positives = 102/327 (31%), Gaps = 23/327 (7%)
Query: 59 PHPIPAKTLNPVSGQSNYGG-SQGSGQTLNRPPVASNP------VTPSLHSGPA-PRMPL 110
P P A T + S GG + S + P A+ P TPS P P
Sbjct: 1189 PSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATP 1248
Query: 111 PASQNPATTPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTN 170
P+ + TP P + P A PP L P N P + P+ G + T+
Sbjct: 1249 PSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPN--PAVVTPPSPKGGPA--TS 1304
Query: 171 HQYVSSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSS 230
+ P+ K P PP P P P +P G P P P T S
Sbjct: 1305 PPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPS 1364
Query: 231 YRDVPQPLFNSAVNQEG---ITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRS 287
++ P P + ++ G + G + D + +P+ P
Sbjct: 1365 SKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREG 1424
Query: 288 VGYSYPSLPPGYQNTTPPGATGVPPSSLNYPSGPQAFTQTP--LGANHLTTSMSGLSLQP 345
+ P + TPP T V S P+ TP G L +P
Sbjct: 1425 ------AATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEP 1478
Query: 346 EGLRVVNLLQERNMLPSTPLKPPVPNL 372
+ V P+TP P L
Sbjct: 1479 PAPKQVATSSSPKKAPATPAPMGAPTL 1505
Score = 44.7 bits (104), Expect = 5e-04
Identities = 74/320 (23%), Positives = 106/320 (33%), Gaps = 42/320 (13%)
Query: 95 PVTPSLHSGP-APRMPLPASQNPATTPMPSSSFLPEANLPPPLNWQ-YNYPSTASQTNHC 152
P TPS P AP L + + PAT + P +P P P A T
Sbjct: 1517 PATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSS 1576
Query: 153 PRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGP 212
ASS P V+ +T G PS + I + P P P P +P
Sbjct: 1577 KEASSPPAVTPSTY---------KGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKG 1627
Query: 213 PPAGGPPPVRALTPLT-SSYRDVPQPLFNSAVNQEGITSNTNNG--SMVVHSSYDEI--- 266
P P P+T SS +D P + + G + ++ E+
Sbjct: 1628 PATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVA 1687
Query: 267 ---EGGGLLATPQLTNKNPKMSRSVGYSYPSLP-PGYQNTTPPGATGVPPSSL------- 315
E ++ P T K P+ +S S P P P +N + + V P+ L
Sbjct: 1688 PAPESTPIITAP--TRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDS 1745
Query: 316 ----------NYPSGPQAFTQTPLGANHLTTSMSGLSLQPEGLRVVNLLQERNMLPSTPL 365
+ P GP A ++ + + +PE V LP P
Sbjct: 1746 SKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAP- 1804
Query: 366 KPPVPNLHEDIQKLNCNPEL 385
PVP L Q L +P L
Sbjct: 1805 -SPVPTLPPKQQFLPSSPGL 1823
Score = 38.9 bits (89), Expect = 0.027
Identities = 83/376 (22%), Positives = 139/376 (36%), Gaps = 54/376 (14%)
Query: 19 QNGAALASGSPYTNGPVQNALLSSQESVSQGYNFQLPGS-YPHPIPAKTLNPVSGQSNYG 77
+N + S S P+ +++S+ + P S P+ + V +Y
Sbjct: 568 KNSPSFQSTSSSPEIPLSPEATLAKKSLGEPLPIGKPASSMTSPLGVNSSASVIKTDSYA 627
Query: 78 GSQGSGQTLNR----PPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSSSFLP-EANL 132
G +G L P VA+ P+ + +G AP ++ +T +S FL +L
Sbjct: 628 GPDSAGPLLKSSLITPTVAAFPLESADPAGVAPT----TAKGTSTYTTTASPFLEGTVSL 683
Query: 133 PPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPSV 192
P N+P P PT S N + + Q + +L + P +
Sbjct: 684 APK-----NHPVKEGTLTTLPLV---PTASENCPVAPSPQNTCAPLATLVLA-----PEI 730
Query: 193 PPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQPLFNSAVNQEGITSNT 252
P V P P+ G P G G AL P+ SS ++ P G ++
Sbjct: 731 PKSV--PSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECP-------TEDSGASATA 781
Query: 253 NNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQNT--TPPGATGV 310
++ + + + D G+ +PQ T + P S G P P G ++ +P A+ +
Sbjct: 782 SSKGTLTYLA-DSPSPLGVSVSPQ-TKRPPTKKGSAG---PDTPIGNLSSPVSPVEASFL 836
Query: 311 PPSSLNY----PSGPQAFTQTPLGANHLTTSMSGLSLQPEGL----------RVVNLLQE 356
P +SL++ S + TP T + L P+G+ VVNL
Sbjct: 837 PENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFP 896
Query: 357 RNMLPSTPLKPPVPNL 372
+ P+TP P L
Sbjct: 897 KEG-PATPAPKQAPAL 911
Score = 34.3 bits (77), Expect = 0.66
Identities = 43/182 (23%), Positives = 67/182 (36%), Gaps = 11/182 (6%)
Query: 63 PAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGP----APRMPLPASQNPAT 118
PA P+ G Q + PP+ +P + GP AP LP ++ +
Sbjct: 1688 PAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSK 1747
Query: 119 TPM-PSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSG 177
T +S P+ L PP + + + P TA+ +VS S + S
Sbjct: 1748 TAKGKDASHSPKGPLAPPES-KASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSP 1806
Query: 178 YPSL--QNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVP 235
P+L + F+ S P + L +P P P P P P+ P S ++P
Sbjct: 1807 VPTLPPKQQFLPSSPGL-VLESPSKP--LAPADEDELLPLIPPEPISGGVPFQSVLVNMP 1863
Query: 236 QP 237
P
Sbjct: 1864 TP 1865
Score = 33.5 bits (75), Expect = 1.1
Identities = 94/447 (21%), Positives = 155/447 (34%), Gaps = 89/447 (19%)
Query: 80 QGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNP---------ATTPMPSSSFLPEA 130
Q +T P ++ VT +L P P +P P S P +P PS S + A
Sbjct: 18 QPQAETAVLPMSSALSVTAALGQ-PGPTLPPPCSPAPQQCPLSAANQASPFPSPSTI--A 74
Query: 131 NLPPPLNWQYNYPSTASQTNHCPRASS----------------------QPTVSGNTSLT 168
+ P + + + TA P A + PT+ G S +
Sbjct: 75 STPLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLKGTPSSS 134
Query: 169 TNHQYVSSGYPSLQNS------FIKSGPSVPPLVNPPLPTTFQPGAPHGPP--------- 213
V+ S+Q S + S PSV + + T P AP P
Sbjct: 135 APLALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAPIAPSEPKTNLNKVPSE 194
Query: 214 ----PAGGPPP-----------VRALTPLTSSYRDVPQ--PLFNSAVNQEGITSNTNNGS 256
P G P P V + + S +PQ P A+ + T +
Sbjct: 195 VVPNPKGTPSPPCIVSTVPYHCVTPMASIQSGVASLPQTTPTTTLAIASPQVKDTTISSV 254
Query: 257 MVVHSSYDEIEGGGLLATPQL----TNKNPKMSRSVGYSYPSLPPGY-----QNTTPPGA 307
++ + + G ++ P T P ++ S + P+ PP + + P
Sbjct: 255 LISPQNPGSLSLKGPVSPPAALSLSTQSLPVVTSSQKTAGPNTPPDFPISLGSHLAPLHQ 314
Query: 308 TGVPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQPEGLRVVNLLQERN-MLPST--- 363
+ L +GP A + + + S +G S P V+ L RN ++P+T
Sbjct: 315 SSFGSVQLLGQTGPSALSDPTVKTISVDHSSTGAS-YPSQRSVIPPLPSRNEVVPATVAA 373
Query: 364 --PLKPPVPNLHEDIQKLNCNP--ELFRCTLTSIPQTQALLNKAKLPLGLLLHPFKDLVQ 419
+ P V I + C+P L T S+ T +L+ K+ P +P + Q
Sbjct: 374 FPVVAPSVDKGPSTISSITCSPSGSLNVATSFSLSPTTSLILKSS-PNATYHYPL--VAQ 430
Query: 420 LPV--VTSSTIVRCRSCRTYINPFVSF 444
+PV V ++ +V C P +F
Sbjct: 431 MPVSSVGTTPLVVTNPCTIAAAPTTTF 457
Score = 33.1 bits (74), Expect = 1.5
Identities = 85/376 (22%), Positives = 129/376 (34%), Gaps = 64/376 (17%)
Query: 4 PGIPASGGAPASLQAQNGAALASGSPYTNGPVQNALLSSQESVSQGYNF--QLPGSYPHP 61
P + +S+ +L + ++ P + +L S + + Y Q+P S
Sbjct: 379 PSVDKGPSTISSITCSPSGSLNVATSFSLSPTTSLILKSSPNATYHYPLVAQMPVSSVGT 438
Query: 62 IPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGP-----APRMPL-PASQN 115
P NP + + + T PP++S P++ + P AP P P++Q
Sbjct: 439 TPLVVTNPCTIAAA-PTTTFEVATCVSPPMSSGPISNIEPTSPAALVMAPVAPKEPSTQV 497
Query: 116 PATTPMPSSSFLPE----ANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNH 171
T +P S LP+ NLP + +P+ P LTT
Sbjct: 498 ATTLRIPVSPPLPDPEDLKNLPSSV--LVKFPTQKDLQTVPASLEGAPFSPAQAGLTTKK 555
Query: 172 --------QYVSSGYPSLQNSFIKSGPSVP--PLVNPPLPTTFQPGAPHGPPPAGGPPPV 221
Q PS Q++ S P +P P + +P P G P + P+
Sbjct: 556 DPTVLPLVQAAPKNSPSFQST--SSSPEIPLSPEATLAKKSLGEP-LPIGKPASSMTSPL 612
Query: 222 ----RALTPLTSSYR--DVPQPLFNSAV-------------NQEGITSNTNNGSMVVHSS 262
A T SY D PL S++ + G+ T G+ S+
Sbjct: 613 GVNSSASVIKTDSYAGPDSAGPLLKSSLITPTVAAFPLESADPAGVAPTTAKGT----ST 668
Query: 263 YDEIEGGGLLATPQLTNKNPKMSRSVGYSYPSLP---------PGYQNTTPPGATGV--- 310
Y L T L KN + + P +P P QNT P AT V
Sbjct: 669 YTTTASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSPQNTCAPLATLVLAP 728
Query: 311 -PPSSLNYPSGPQAFT 325
P S+ PS P A T
Sbjct: 729 EIPKSVPSPSLPPAGT 744
Score = 32.7 bits (73), Expect = 1.9
Identities = 87/347 (25%), Positives = 118/347 (34%), Gaps = 54/347 (15%)
Query: 22 AALASGSPYTNGPVQNALLSSQESVSQGYNFQLPGSYPHPIPAKTLNP----VSGQSNYG 77
AALA SP P SS ++ L PH + + P S S
Sbjct: 114 AALALASPMI-APTLKGTPSSSAPLA------LVALAPHSVQKSSAFPPNLLTSPPSVAV 166
Query: 78 GSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSS--SFLPEANLPPP 135
GS TL+ P S P T +L+ P+ +P NP TP P S +P + P
Sbjct: 167 AESGSVITLSAPIAPSEPKT-NLNKVPSEVVP-----NPKGTPSPPCIVSTVPYHCVTPM 220
Query: 136 LNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQN--SFIKSGPSVP 193
+ Q S T A + P V T +SS S QN S GP P
Sbjct: 221 ASIQSGVASLPQTTPTTTLAIASPQVKDTT--------ISSVLISPQNPGSLSLKGPVSP 272
Query: 194 PLV------NPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQPLFNSAVNQEG 247
P + P+ T+ Q A PP L PL S Q L
Sbjct: 273 PAALSLSTQSLPVVTSSQKTAGPNTPPDFPISLGSHLAPLHQSSFGSVQLL--GQTGPSA 330
Query: 248 ITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQ------- 300
++ T V HSS P L ++N + +V ++P + P
Sbjct: 331 LSDPTVKTISVDHSSTGASYPSQRSVIPPLPSRNEVVPATVA-AFPVVAPSVDKGPSTIS 389
Query: 301 --NTTPPGATGV-------PPSSLNYPSGPQAFTQTPLGANHLTTSM 338
+P G+ V P +SL S P A PL A +S+
Sbjct: 390 SITCSPSGSLNVATSFSLSPTTSLILKSSPNATYHYPLVAQMPVSSV 436
Score = 32.0 bits (71), Expect = 3.3
Identities = 69/304 (22%), Positives = 98/304 (32%), Gaps = 33/304 (10%)
Query: 89 PPVASNPVTPSLHSGPAPRMPLPASQNPATTPMP-SSSFLPEANLPPPLNWQYNYPSTAS 147
P P P+ PA AS PA TP + P+ L PP T+
Sbjct: 1556 PSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPP-------AVTSP 1608
Query: 148 QTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQPG 207
P + S T + P + S +K P+ P V + T P
Sbjct: 1609 SPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATV-PQ 1667
Query: 208 APHGPPPAGGP--------PPVRALTP-LTSSYRDVPQPLFNSAVNQEGITS-NTNNGSM 257
A G P GP P TP +T+ R PQ +SA + + NGS
Sbjct: 1668 ASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGS- 1726
Query: 258 VVHSSYDEIEGGGLLATPQLTNKNPK-MSRSVGYSYPSLPPGYQNTTPPGATGV-----P 311
+ LL + ++K K S P PP + +TP A
Sbjct: 1727 --KGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPK 1784
Query: 312 PSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQPEGLRVVNLLQERNMLPS-----TPLK 366
P S + + P PL + + T P +V + + P+ PL
Sbjct: 1785 PESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADEDELLPLI 1844
Query: 367 PPVP 370
PP P
Sbjct: 1845 PPEP 1848
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 59.7 bits (143), Expect = 1e-08
Identities = 74/332 (22%), Positives = 117/332 (35%), Gaps = 48/332 (14%)
Query: 13 PASLQAQNGAALASGSPYTNGPVQN-----------ALLSSQESVSQGYNFQLPGSY--- 58
P QA A ++ SP T Q+ A + ++ + N +LPG+
Sbjct: 1299 PTVTQATTRATASTASPATTSTAQSTTRTTMTLPTPATSGTSPTLPKSTNQELPGTTATQ 1358
Query: 59 ---PHPIPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQN 115
P P PA T P + Q + +T + H+ +P P S
Sbjct: 1359 TTGPRPTPASTTGPTTPQPGQPTRPTATETTQTRTTTEYTTPQTPHTTHSP--PTAGSPV 1416
Query: 116 PATTPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVS 175
P+T P+ ++SF P P ++P T T+ P ++S T S +T +T H ++
Sbjct: 1417 PSTGPVTATSFHATTTYPTP-----SHPETTLPTHVPPFSTSLVTPSTHTVITPTHAQMA 1471
Query: 176 SGYPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVP 235
+ S S P PP T G+ H PP +TP TS
Sbjct: 1472 TS---------ASNHSAPTGTIPPPTTLKATGSTHTAPP---------ITPTTSG----T 1509
Query: 236 QPLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYPSL 295
+S + TS ++ S H + P T ++ + +
Sbjct: 1510 SQAHSSFSTNKTPTSLHSHTSSTHHPEVTPTSTTTITPNPTSTRTRTPVAHTNSATSSRP 1569
Query: 296 PPGYQNTTPPGATGVPPSSLNYPSGPQAFTQT 327
PP + +PP TG P S P +F T
Sbjct: 1570 PPPFTTHSPP--TGSSPFSSTGPMTATSFKTT 1599
Score = 46.2 bits (108), Expect = 2e-04
Identities = 77/327 (23%), Positives = 124/327 (37%), Gaps = 40/327 (12%)
Query: 25 ASGSPYTNGPVQNALLSSQESVSQGYNFQLPGSYPHPIPAKTLNP-VSGQSNYGGSQGSG 83
A+GS +T P+ + ++ S + P S H + T +P V+ S +
Sbjct: 1492 ATGSTHTAPPITPTTSGTSQAHSSFSTNKTPTSL-HSHTSSTHHPEVTPTSTTTITPNPT 1550
Query: 84 QTLNRPPVA-SNPVTPSLHSGPAPRMPLPASQNP--ATTPMPSSSFLPEANLPPPLNWQY 140
T R PVA +N T S P P +P +T PM ++SF P P
Sbjct: 1551 STRTRTPVAHTNSATSSRPPPPFTTHSPPTGSSPFSSTGPMTATSFKTTTTYPTP----- 1605
Query: 141 NYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPPL 200
++P T T+ P ++S T S +T +T H +++ S S+P PP
Sbjct: 1606 SHPQTTLPTHVPPFSTSLVTPSTHTVITPTHAQMATS---------ASIHSMPTGTIPPP 1656
Query: 201 PTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQPLFNSAVNQEGI---TSNTNNGSM 257
T G+ H P LT+S N+A + TS+T++
Sbjct: 1657 TTLKATGSTHTAP----------TMTLTTSGTSQALSSLNTAKTSTSLHSHTSSTHHAEA 1706
Query: 258 VVHSSYDEIEGGGLLATPQLT-----NKNPKMSRSVGYSYPSLPPGYQNTTPPGATGVPP 312
S+ + TP +T + S S + SL +T P T
Sbjct: 1707 TSTSTTNITPNPTSTGTPPMTVTTSGTSQSRSSFSTAKTSTSLHSHTSSTHHPEVTSTST 1766
Query: 313 SSLNYPSGPQAFTQTPLGANHLTTSMS 339
+S+ P+ T+TP+ H T++ S
Sbjct: 1767 TSIT-PNHTSTGTRTPVA--HTTSATS 1790
Score = 46.2 bits (108), Expect = 2e-04
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 69 PVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPAS-QNPATTPMPSSSFL 127
PV + GS S T P AS +P S PA + A+ + ++P S+ L
Sbjct: 2169 PVHSTTLSSGSHSSLST--HPTTASVSASPLFPSSPAASTTIRATLPHTISSPFTLSALL 2226
Query: 128 PEANL---PPPLNWQYNY-------PSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSG 177
P + + P P + + P T + T+ P SSQ T S +TSLTT + +SG
Sbjct: 2227 PISTVTVSPTPSSHLASSTIAFPSTPRTTASTHTAPAFSSQSTTSRSTSLTT--RVPTSG 2284
Query: 178 YPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQP 237
+ SL + +G P+ N TT PG P R LT +++ P
Sbjct: 2285 FVSLTSGV--TGIPTSPVTN---LTTRHPGPTLS-------PTTRFLTSSLTAHGSTPA- 2331
Query: 238 LFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLT 278
++ V+ G + T+ G V +EI G +A +T
Sbjct: 2332 --SAPVSSLGTPTPTSPGVCSVREQQEEITFKGCMANVTVT 2370
Score = 43.5 bits (101), Expect = 0.001
Identities = 81/354 (22%), Positives = 123/354 (34%), Gaps = 50/354 (14%)
Query: 25 ASGSPYTNGPVQNALLSSQESVSQGYNFQLPGSYPHPIPAKTLNPVSGQSNYGGSQGSGQ 84
A+GS +T P+ + +S S + S P+ + V+ S +
Sbjct: 1885 ATGSTHTAPPMTPTTSGTSQSPSSFSTAKTSTSLPYHTSSTHHPEVTPTSTTNITPKHTS 1944
Query: 85 TLNRPPVASN--------PVTPSLHSGPAPRMPLPASQNPATTPMPSSSFLPEANLPPPL 136
T R PVA P + HS P P + T PM ++SF P P
Sbjct: 1945 TGTRTPVAHTTSASSSRLPTPFTTHSPPTGSSPFSS-----TGPMTATSFQTTTTYPTP- 1998
Query: 137 NWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPSVPPLV 196
++P T T+ P ++S T S +T + T H +++ S S P
Sbjct: 1999 ----SHPQTTLPTHVPPFSTSLVTPSTHTVIITTHTQMATS---------ASIHSTPTGT 2045
Query: 197 NPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQPLFNSAVNQEGITSNT---N 253
PP T G+ H PP +T TS + + I+S++
Sbjct: 2046 VPPPTTLKATGSTHTAPP---------MTVTTSGTSQTHSSFSTATASSSFISSSSWLPQ 2096
Query: 254 NGSMVVHSS--YDEIEGGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQNTTPPGATGVP 311
N S SS ++ TP T S S S PS Y P + P
Sbjct: 2097 NSSSRPPSSPITTQLPHLSSATTPVSTTNQLSSSFSPSPSAPSTVSSY----VPSSHSSP 2152
Query: 312 PSSLNYPSGPQAFTQTPLGANHLTT-SMSGLSLQPEGLRVVNLLQERNMLPSTP 364
+S +F P+ + L++ S S LS P V + PS+P
Sbjct: 2153 QTSSPSVGTSSSFVSAPVHSTTLSSGSHSSLSTHPTTASV----SASPLFPSSP 2202
Score = 37.7 bits (86), Expect = 0.060
Identities = 56/229 (24%), Positives = 73/229 (31%), Gaps = 47/229 (20%)
Query: 53 QLPGSYPHPIPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPA 112
QLP + P + S S G + N P AS TP L + P +
Sbjct: 1209 QLPTTGSRPTQVWPMTGTSTTIGLLSSTGPSPSSNHTP-ASPTQTPLLPATLTSSKPTAS 1267
Query: 113 SQNP-----ATTPMPSSSFLPEANL----PPPLNWQYNYPSTASQTNHCPRASSQPTVSG 163
S P A TP +S P A L P Q +TAS + +++Q T
Sbjct: 1268 SGEPPRPTTAVTPQATSGLPPTATLRSTATKPTVTQATTRATASTASPATTSTAQSTT-- 1325
Query: 164 NTSLTTNHQYVSSGYPSLQNSFIKSGPSV---------PPLVNPPLPTTFQPGAP----- 209
T++T S P+L S + P P + PTT QPG P
Sbjct: 1326 RTTMTLPTPATSGTSPTLPKSTNQELPGTTATQTTGPRPTPASTTGPTTPQPGQPTRPTA 1385
Query: 210 ---------------------HGPPPAGGPPPVRALTPLTSSYRDVPQP 237
H PP AG P P TS + P
Sbjct: 1386 TETTQTRTTTEYTTPQTPHTTHSPPTAGSPVPSTGPVTATSFHATTTYP 1434
Score = 30.8 bits (68), Expect = 7.3
Identities = 60/337 (17%), Positives = 112/337 (33%), Gaps = 38/337 (11%)
Query: 60 HPIPAKTLNPVSGQSNYGGSQ----------GSGQTLNRPPVASNPVTPSLHSGPAPRMP 109
H +P T+ P + G + G+ Q L+ A + H+
Sbjct: 1646 HSMPTGTIPPPTTLKATGSTHTAPTMTLTTSGTSQALSSLNTAKTSTSLHSHTSSTHHAE 1705
Query: 110 LPASQNPATTPMPSSSFLPEANLPPPLNWQYNYPSTASQTN---HCPRASS---QPTVSG 163
++ TP P+S+ P + Q + ++T+ H +S+ + T +
Sbjct: 1706 ATSTSTTNITPNPTSTGTPPMTVTTSGTSQSRSSFSTAKTSTSLHSHTSSTHHPEVTSTS 1765
Query: 164 NTSLTTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRA 223
TS+T NH + P + S P TT P P G P PV A
Sbjct: 1766 TTSITPNHTSTGTRTPVAHTTSATSSRLPTPF------TTHSP--PTGTTPISSTGPVTA 1817
Query: 224 LTPLTSSYRDVPQ------PLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQL 277
+ T++ P P + + +T +T+ ++++ + + + P
Sbjct: 1818 TSFQTTTTYPTPSHPHTTLPTHVPSFSTSLVTPSTH--TVIIPTHTQMATSASIHSMPTG 1875
Query: 278 TNKNPKMSRSVGYSY---PSLPPGYQNTTPPGATGVPPSSLNYP---SGPQAFTQTPLGA 331
T P ++ G ++ P P + P + +S + P S TP
Sbjct: 1876 TIPPPTTIKATGSTHTAPPMTPTTSGTSQSPSSFSTAKTSTSLPYHTSSTHHPEVTPTST 1935
Query: 332 NHLTTSMSGLSLQPEGLRVVNLLQERNMLPSTPLKPP 368
++T + + + R P T PP
Sbjct: 1936 TNITPKHTSTGTRTPVAHTTSASSSRLPTPFTTHSPP 1972
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 59.3 bits (142), Expect = 2e-08
Identities = 74/289 (25%), Positives = 100/289 (34%), Gaps = 70/289 (24%)
Query: 3 QPGIPASGGAPASLQAQNGAALASGSPYTN-GPVQNALLSSQESVSQGYNFQLPGSYPHP 61
+P PA+ P SL + S P+ N GP ++ G P S+PHP
Sbjct: 345 RPAAPANNPPPPSLMSTT----QSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHP 400
Query: 62 IPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAP---RMPLPASQNPAT 118
+P+ T +GG PP P P ++ GP P P P Q +
Sbjct: 401 LPSLT-------GGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGS 453
Query: 119 TPMPSSSFL----------------------PEANLPPPLN-----WQYNY-------PS 144
TP+ S + P PPP + WQ P
Sbjct: 454 TPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPP 513
Query: 145 TASQTNHCPRASSQPTVSGNTSLTTNH----------QYVSSGYPSLQNSFIKSGPSVPP 194
++S + P Q T + TS T S G P +Q + + +PP
Sbjct: 514 SSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGN--PTMVPLPP 571
Query: 195 LVNPPLPTTFQPGAPHGPPP-----AGGPPPVRALTPLTSSYRDVPQPL 238
V PPLP PGAP PPP AG P R + D P+PL
Sbjct: 572 GVQPPLP----PGAPPPPPPPPPGSAGMMIPPRGGDGPSHESEDFPRPL 616
Score = 33.9 bits (76), Expect = 0.86
Identities = 47/186 (25%), Positives = 60/186 (32%), Gaps = 39/186 (20%)
Query: 188 SGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQPLFNSAVNQEG 247
SGP+ PL + P P PA PPP P S P NS ++
Sbjct: 333 SGPATTPLASAPRPAA----------PANNPPP-----PSLMSTTQSRPPWMNSGPSES- 376
Query: 248 ITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQ-NTTPPG 306
Y + GGG P P S + PSL G+ +
Sbjct: 377 -------------RPYHGMHGGG----PGGPGGGP---HSFPHPLPSLTGGHGGHPMQHN 416
Query: 307 ATGVPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQPEGLRVVNLLQERNMLPSTP-- 364
G PP + P P P G + L P G V L Q + M+P P
Sbjct: 417 PNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMG 476
Query: 365 LKPPVP 370
+ PP P
Sbjct: 477 MMPPPP 482
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 58.9 bits (141), Expect = 3e-08
Identities = 69/266 (25%), Positives = 93/266 (34%), Gaps = 68/266 (25%)
Query: 3 QPGIPASGGAPASLQAQNGAALASGSPYTN-GPVQNALLSSQESVSQGYNFQLPGSYPHP 61
+P PA+ P SL + S P+ N GP ++ G P S+PHP
Sbjct: 345 RPAAPANNPPPPSLMSTT----QSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHP 400
Query: 62 IPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAP---RMPLPASQNPAT 118
+P+ T +GG PP P P ++ GP P P P Q +
Sbjct: 401 LPSLT-------GGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGS 453
Query: 119 TPMPSSSFL----------------------PEANLPPPLN-----WQYNY-------PS 144
TP+ S + P PPP + WQ P
Sbjct: 454 TPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPP 513
Query: 145 TASQTNHCPRASSQPTVSGNTSLTTNH----------QYVSSGYPSLQNSFIKSGPSVPP 194
++S + P Q T + TS T S G P +Q + + +PP
Sbjct: 514 SSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGN--PTMVPLPP 571
Query: 195 LVNPPLPTTFQPGAPHGPPPAGGPPP 220
V PPLP PGAP PPP PPP
Sbjct: 572 GVQPPLP----PGAPPPPPP---PPP 590
>gi|188497758 ubiquitin associated protein 2-like isoform a [Homo
sapiens]
Length = 1087
Score = 58.9 bits (141), Expect = 3e-08
Identities = 85/345 (24%), Positives = 133/345 (38%), Gaps = 52/345 (15%)
Query: 15 SLQAQNGAALASGSPYTNG-PVQNALLSSQE--SVSQGYNFQLPG-SYPHPIPAKTLNPV 70
S++ G+A+ S SP T+ P N +S+ + + ++ L G S+ IP T
Sbjct: 634 SVEGATGSAVKSDSPSTSSIPPLNETVSAASLLTTTNQHSSSLGGLSHSEEIPNTTTTQH 693
Query: 71 SG-----QSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSSS 125
S Q+ S SG+T + LH+ L +S + +T + S
Sbjct: 694 SSTLSTQQNTLSSSTSSGRT---------STSTLLHTSVESEANLHSSSSTFSTTSSTVS 744
Query: 126 FLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNT---SLTTNHQYVSSGYPSLQ 182
PPP+ S +S N SG++ SL +N +S S+
Sbjct: 745 ------APPPV------VSVSSSLN-----------SGSSLGLSLGSNSTVTASTRSSVA 781
Query: 183 NSFIKSGPSVPPLVNPPLPTTF--QPGAPHG-PPPAGGPPPVRAL-TPLTSSYRDVPQPL 238
+ K+ P++PP V P LP + PG H PP G ++ L T Y +P P
Sbjct: 782 TTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPT 841
Query: 239 FNSAVNQE--GITSNTNNGSMVVHSSYDEIEGGGL--LATPQLTNKNPKMSRSVGYSYPS 294
+ + + SN +G + D LA PQ + + P+
Sbjct: 842 PTTPLTGRDGSLASNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQTHHTTQQTFLNPA 901
Query: 295 LPPGYQNTTPPGATGVPPSSLNYPSGPQAFTQTPLGANHLTTSMS 339
LPPGY T+ P TGVP + GP F P + ++S
Sbjct: 902 LPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVS 946
Score = 33.1 bits (74), Expect = 1.5
Identities = 55/230 (23%), Positives = 75/230 (32%), Gaps = 41/230 (17%)
Query: 57 SYPHPIPAKTL---------NPVSGQ-SNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAP 106
S P P P L NP SG + +G S P A+ P +
Sbjct: 836 SIPFPTPTTPLTGRDGSLASNPYSGDLTKFGRGDASS-----PAPATTLAQPQQNQTQTH 890
Query: 107 RMPLPASQNPATTPMPSSSFLPEANLPPPLNWQYNY--------PSTASQ------TNHC 152
NPA P S + LP P L + Y P+++ Q N
Sbjct: 891 HTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNAS 950
Query: 153 PRASSQPTVSGNTSLTTNHQYVSSG----------YPSLQNSFIKSG-PSVPPLVNPPLP 201
QP+ G+ T SS Y Q SF K G S P + LP
Sbjct: 951 ATPFQQPSGYGSHGYNTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHSGTPAASFNLP 1010
Query: 202 TTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQPLFNSAVNQEGITSN 251
+ G P P A PP + LT + Q + + + Q+G T +
Sbjct: 1011 SALGSGGPINPATAAAYPPAPFMHILTPHQQPHSQ-ILHHHLQQDGQTGS 1059
>gi|188497756 ubiquitin associated protein 2-like isoform b [Homo
sapiens]
Length = 983
Score = 58.9 bits (141), Expect = 3e-08
Identities = 85/345 (24%), Positives = 133/345 (38%), Gaps = 52/345 (15%)
Query: 15 SLQAQNGAALASGSPYTNG-PVQNALLSSQE--SVSQGYNFQLPG-SYPHPIPAKTLNPV 70
S++ G+A+ S SP T+ P N +S+ + + ++ L G S+ IP T
Sbjct: 634 SVEGATGSAVKSDSPSTSSIPPLNETVSAASLLTTTNQHSSSLGGLSHSEEIPNTTTTQH 693
Query: 71 SG-----QSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSSS 125
S Q+ S SG+T + LH+ L +S + +T + S
Sbjct: 694 SSTLSTQQNTLSSSTSSGRT---------STSTLLHTSVESEANLHSSSSTFSTTSSTVS 744
Query: 126 FLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNT---SLTTNHQYVSSGYPSLQ 182
PPP+ S +S N SG++ SL +N +S S+
Sbjct: 745 ------APPPV------VSVSSSLN-----------SGSSLGLSLGSNSTVTASTRSSVA 781
Query: 183 NSFIKSGPSVPPLVNPPLPTTF--QPGAPHG-PPPAGGPPPVRAL-TPLTSSYRDVPQPL 238
+ K+ P++PP V P LP + PG H PP G ++ L T Y +P P
Sbjct: 782 TTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPT 841
Query: 239 FNSAVNQE--GITSNTNNGSMVVHSSYDEIEGGGL--LATPQLTNKNPKMSRSVGYSYPS 294
+ + + SN +G + D LA PQ + + P+
Sbjct: 842 PTTPLTGRDGSLASNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQTHHTTQQTFLNPA 901
Query: 295 LPPGYQNTTPPGATGVPPSSLNYPSGPQAFTQTPLGANHLTTSMS 339
LPPGY T+ P TGVP + GP F P + ++S
Sbjct: 902 LPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVS 946
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 58.2 bits (139), Expect = 4e-08
Identities = 97/366 (26%), Positives = 134/366 (36%), Gaps = 58/366 (15%)
Query: 4 PGIPASGGAPASLQAQNGAALASGSPYTNGPVQNALLSSQESVSQGYNFQLP-GSYPH-P 61
P P + GA QA + A S +P P L S S Q P G PH P
Sbjct: 735 PATPVAKGAGLGPQAPDSQA--SPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLGDSPHLP 792
Query: 62 IPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMP--LPAS---QNP 116
P T P S Q+++RPP P LH P P+ P LP QN
Sbjct: 793 SPHPTRPPSRPPSR-------PQSVSRPPSE-----PPLHPCPPPQAPPTLPGIFVIQNQ 840
Query: 117 ATTPMPSSSFLPEANLPP--PLNWQYNYPS-TASQTNHCPRASSQPTVSGNTSLTTNHQY 173
P P+S+ P A PP PL Q P H P +S+ V+ ++ ++
Sbjct: 841 LGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPA 900
Query: 174 VSSGYPSLQNSFIKSGPSVPPLVNP-PLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYR 232
P+ + ++ PS P +P P PT P PPP PP R +T+ +
Sbjct: 901 -----PTPSDFQLQFPPSQGPHKSPTPPPTLHLVPEPAAPPP----PPPRTFQMVTTPFP 951
Query: 233 DVPQPLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQL-TNKNPKMSRSVGY- 290
+PQP + V + + GG A PQ T+ P S +
Sbjct: 952 ALPQP-----------KALLERFHQVPSGIILQNKAGGAPAAPQTSTSLGPLTSPAASVL 1000
Query: 291 -------SYPSLPPGYQNTTPPGATGVPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSL 343
P+ P P ATG+PP P+ +AF N + SG
Sbjct: 1001 VSGQAPSGTPTAPSHAPAPAPMAATGLPPL---LPAENKAFASNLPTLNVAKAASSGPG- 1056
Query: 344 QPEGLR 349
+P GL+
Sbjct: 1057 KPSGLQ 1062
Score = 49.7 bits (117), Expect = 2e-05
Identities = 103/415 (24%), Positives = 143/415 (34%), Gaps = 81/415 (19%)
Query: 4 PGIPASGGAPASLQAQ----NGAALASGSPYTNGP-VQNALLSSQESVSQGYNFQLPGSY 58
PG PA P L A G LA+ +P+T G + N +L++Q N P S
Sbjct: 475 PGAPAVQ-LPQQLSALPANVGGQILAAAAPHTGGQLIANPILTNQ-------NLAGPLSL 526
Query: 59 PHPIPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPAT 118
L P SG + + + +P + PV SL +G P PA PA
Sbjct: 527 -----GPVLAPHSGAHSAHILSAAPIQVGQPALFQMPV--SLAAGSLPTQSQPAPAGPAA 579
Query: 119 TPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGY 178
T + L LPP N P Q P + T LT
Sbjct: 580 TTV-----LQGVTLPPSAVAMLNTPDGLVQ----PATPAAATGEAAPVLT---------- 620
Query: 179 PSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQPL 238
++ P PP V+ PLP Q PP A P P A P ++ PQP
Sbjct: 621 -------VQPAPQAPPAVSTPLPLGLQQPQAQQPPQA--PTPQAAAPPQATT----PQPS 667
Query: 239 FNSAVNQEGIT-SNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYP---- 293
A + E I + + + D ++ + PQ ++ P + S P
Sbjct: 668 PGLASSPEKIVLGQPPSATPTAILTQDSLQ----MFLPQERSQQPLSAEGPHLSVPASVI 723
Query: 294 -SLPPGYQNTTP--PGATG------VPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQ 344
S PP Q+ P P A G P S + PQ PL ++S S
Sbjct: 724 VSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQA 783
Query: 345 PEGLRVVNLLQERNMLPST-PLKPP--VPNLHEDIQKLNCNPELFRCTLTSIPQT 396
P G + LPS P +PP P+ + + + P L C P T
Sbjct: 784 PLG--------DSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQAPPT 830
Score = 36.6 bits (83), Expect = 0.13
Identities = 66/251 (26%), Positives = 91/251 (36%), Gaps = 49/251 (19%)
Query: 7 PASGGAPASLQAQNGAALASGSPYT-----------NGP----VQNALLSSQESVSQGYN 51
PA GGA + GAA + P GP AL+ Q+ V++ +
Sbjct: 136 PADGGAGPT--GAGGAAAVAAGPQALFPGSTDLLGLQGPPTVLTHQALVPPQDVVNKALS 193
Query: 52 FQLPGSYPHPIPAKTLNPVSG-QSNYGGSQG--SGQTLNRPPVASNPVTPSLHSGPAPRM 108
Q P P + TL P+ G Q GS G + TL P+ + P +
Sbjct: 194 VQ-PFLQPVGLGNVTLQPIPGLQGLPNGSPGGATAATLGLAPI-------QVVGQPVMAL 245
Query: 109 PLPASQNPATTPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASS---QPTVSGNT 165
P SQ A +P S +L A P + P T + P+ + Q +S
Sbjct: 246 NTPTSQLLAKQ-VPVSGYLASAAGP-------SEPVTLASAGVSPQGAGLVIQKNLSAAV 297
Query: 166 SLTTNHQYV---------SSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAG 216
+ T N V +G PS Q + G PLV P + P P PAG
Sbjct: 298 ATTLNGNSVFGGAGAASAPTGTPSGQPLAVAPGLGSSPLVPAPNVILHRTPTPIQPKPAG 357
Query: 217 G-PPPVRALTP 226
PP + LTP
Sbjct: 358 VLPPKLYQLTP 368
Score = 35.8 bits (81), Expect = 0.23
Identities = 39/158 (24%), Positives = 56/158 (35%), Gaps = 12/158 (7%)
Query: 13 PASLQAQNGAALASGSPYTNGPVQNALLSSQESVSQGYNFQLPGSYPHPIPAKTLNPVS- 71
P L ++G A GSP ++ LSS S S + L P+P++ P+
Sbjct: 1243 PTKLVIRHGGA--GGSPSVTWARASSSLSSSSSSSSAAS-SLDADEDGPMPSRNRPPIKT 1299
Query: 72 --GQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQ---NPATTPMPSSSF 126
+S G Q V N +H P P L ++ P P P+
Sbjct: 1300 YEARSRIGLKLKIKQEAGLSKVVHNTALDPVHQPPPPPATLKVAEPPPRPPPPPPPTGQM 1359
Query: 127 LPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGN 164
+ PPP + TA HCPR + T N
Sbjct: 1360 NGTVDHPPPAAPERKPLGTAP---HCPRLPLRKTYREN 1394
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 57.0 bits (136), Expect = 1e-07
Identities = 64/260 (24%), Positives = 93/260 (35%), Gaps = 21/260 (8%)
Query: 89 PPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSSSFLPEANLPPPLNWQYNYPSTASQ 148
P +P T + + P P P + P T P +++ P PP P T +
Sbjct: 1519 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTP 1578
Query: 149 TNHCPRASSQPTVSGNT-SLTTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQPG 207
+ S PT++ T TT ++ + + S P+ P+ P TT P
Sbjct: 1579 SPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPT 1638
Query: 208 APHGPPP--AGGPPPVRALTPLTSSYRDVPQPLFNSAVNQEGITSNTNNGSMVVHSSYDE 265
PPP PPP +P T++ P P IT+ T SS
Sbjct: 1639 TTPSPPPTTTTTPPPTTTPSPPTTT---TPSP---------PITTTTTPPPTTTPSS--P 1684
Query: 266 IEGGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQNTTPPGATGVPPSSLNYPSGPQAFT 325
I T +T +P + S + + P +PP T PS PS P T
Sbjct: 1685 ITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPS-PPTTT 1743
Query: 326 QTPLGANHLTTSMSGLSLQP 345
T L TT+ S L+ P
Sbjct: 1744 MTTLPP---TTTSSPLTTTP 1760
Score = 55.5 bits (132), Expect = 3e-07
Identities = 72/316 (22%), Positives = 101/316 (31%), Gaps = 23/316 (7%)
Query: 59 PHPIPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQ-NPA 117
P P TL P + S T PP + P P + P P+ +
Sbjct: 1408 PPPTSTTTLPPTTTPSP------PTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTT 1461
Query: 118 TTPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSG 177
TTP P+++ P P P + P+T + T S PT + T + +
Sbjct: 1462 TTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTT 1521
Query: 178 YPSLQNSFIKSGPSV----PPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRD 233
PS + + P PP P P T P P PPP TP ++
Sbjct: 1522 TPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLP--PTTTPSPPPTTTTTPPPTT--- 1576
Query: 234 VPQPLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYP 293
P P + + IT+ T + TP P + + P
Sbjct: 1577 TPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLP 1636
Query: 294 SL----PPGYQNTTPPGATGVPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQPEGLR 349
PP TTPP T P + PS P T TP TT S ++ P
Sbjct: 1637 PTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTP---PPTTTPSSPITTTPSPPT 1693
Query: 350 VVNLLQERNMLPSTPL 365
PS+P+
Sbjct: 1694 TTMTTPSPTTTPSSPI 1709
Score = 42.7 bits (99), Expect = 0.002
Identities = 54/248 (21%), Positives = 82/248 (33%), Gaps = 20/248 (8%)
Query: 109 PLPASQNPATTPMPSSSFLPEANLPPPLNWQYNYPST-------ASQTNHCPRASSQPTV 161
P P + P+ P +++ P PP P T + T P + P +
Sbjct: 1399 PSPPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPI 1458
Query: 162 SGNT----SLTTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGG 217
S T + T + + P+ S + + PP P P T P P P
Sbjct: 1459 STTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP--PASTTT 1516
Query: 218 PPPVRALTPLTSSYRDVPQPLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQL 277
PP +P T++ P S IT T+ ++ ++ P
Sbjct: 1517 LPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTT 1576
Query: 278 TNKNPKMSRSVGYSYPSLPPGYQNTTPPGATGVPPSSLNYPSGPQAFTQTPLGANHLTTS 337
T P + PS PP TTPP T P + + P T +P +T
Sbjct: 1577 TPSPPTTTT------PS-PPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPP 1629
Query: 338 MSGLSLQP 345
S +L P
Sbjct: 1630 TSTTTLPP 1637
Score = 40.8 bits (94), Expect = 0.007
Identities = 68/304 (22%), Positives = 104/304 (34%), Gaps = 35/304 (11%)
Query: 85 TLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPM--------PSSSFLPEANLPPPL 136
T PP + P +P + + P+P + +P TTP PSS+ P PPP
Sbjct: 1671 TTTTPPPTTTPSSP-ITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPS---PPPT 1726
Query: 137 NWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPSVP--P 194
P+T + PT + + TT S P + F + P+ P P
Sbjct: 1727 TMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTT--PLPPSITPPTFSPFSTTTPTTPCVP 1784
Query: 195 LVNPPLPTTFQPGAPHGPPPAG---------GPPPVRALTPLTSSYRDVPQPLFNSAVNQ 245
L N G P+ P G GP ++ + Y DVP + Q
Sbjct: 1785 LCN--WTGWLDSGKPNFHKPGGDTELIGDVCGPGWAANISCRATMYPDVP-------IGQ 1835
Query: 246 EGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNK-NPKMSRSVGYSYPSLPPGYQNTTP 304
G T + ++ + D+ GG + L + N + V +N TP
Sbjct: 1836 LGQTVVCDVSVGLICKNEDQKPGGVIPMAFCLNYEINVQCCECVTQPTTMTTTTTENPTP 1895
Query: 305 PGATGVPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQPEGLRVVNLLQERNMLPSTP 364
P T + ++ P+ TQTP TT+ + P G + TP
Sbjct: 1896 PTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTP 1955
Query: 365 LKPP 368
P
Sbjct: 1956 TPTP 1959
Score = 36.6 bits (83), Expect = 0.13
Identities = 62/317 (19%), Positives = 106/317 (33%), Gaps = 38/317 (11%)
Query: 59 PHPIPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPAT 118
P P T V+ G+Q T P + VTP+ P P +Q P T
Sbjct: 4035 PTTTPITTTTTVTPTPTPTGTQTPTTT---PITTTTTVTPT----PTPT----GTQTPTT 4083
Query: 119 TPMPSSSFLPEANLPPPLNWQYNYPSTASQT---NHCPRASSQPTVSGNTSLTT-NHQYV 174
TP+ +++ + P P T + T P + PT + T+ TT
Sbjct: 4084 TPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPT 4143
Query: 175 SSGYPSLQNSFIKSGPSVPPLVNPP-------LPTTFQPGAPHGPPPAG---GPPPVRAL 224
+G + + I + +V P P P T P P G GPP +
Sbjct: 4144 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTGPPTHTST 4203
Query: 225 TPLTSSYRDVPQPLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKM 284
P+ P P ++ +S + ++ + IE +T+ P
Sbjct: 4204 APIAELTTSNPPPESSTPQTSRSTSSPLTESTTLLSTLPPAIE---------MTSTAPPS 4254
Query: 285 SRSVGYSYPSLPPGYQNTTPPGATGVPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQ 344
+ + P+ G +PP +T P + P + TT+ S +
Sbjct: 4255 TPTA----PTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTTTTSAWTPT 4310
Query: 345 PEGLRVVNLLQERNMLP 361
P L ++++ + P
Sbjct: 4311 PTPLSTPSIIRTTGLRP 4327
Score = 32.7 bits (73), Expect = 1.9
Identities = 55/237 (23%), Positives = 81/237 (34%), Gaps = 37/237 (15%)
Query: 2 SQPGIPA-SGGAPASLQAQNGAALASGSPYTNGPVQNALLSSQESVSQGYNFQLPGSYPH 60
+Q G P + AP + + S +P T+ + L S +S LP +
Sbjct: 4193 TQTGPPTHTSTAPIAELTTSNPPPESSTPQTSRSTSSPLTESTTLLST-----LPPAIEM 4247
Query: 61 PIPAKTLNPVSGQSNYGGSQGSGQTLNRPP--VASNPVTPSL------HSGPAP---RMP 109
A P + + GG TL+ PP S P TP+ S P P +
Sbjct: 4248 TSTAPPSTPTAPTTTSGG-----HTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTT 4302
Query: 110 LPASQNPATTPMPSSSFLPEANLPPPLNWQYNYPSTA------SQTNHCPRASSQPTVSG 163
++ P TP+ + S + L P YPS+ + T + P G
Sbjct: 4303 TTSAWTPTPTPLSTPSIIRTTGLRP-------YPSSVLICCVLNDTYYAPGEEVYNGTYG 4355
Query: 164 NTSLTTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPP 220
+T N S N S PS P + PT +P + P G PP
Sbjct: 4356 DTCYFVNCSL--SCTLEFYNWSCPSTPSPTPTPSKSTPTPSKPSSTPSKPTPGTKPP 4410
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 56.2 bits (134), Expect = 2e-07
Identities = 70/298 (23%), Positives = 106/298 (35%), Gaps = 51/298 (17%)
Query: 2 SQPGIPASGGAPASLQAQNGAALASGSPYTNGPVQNALLSSQESVSQGYNFQLPGSYPHP 61
S PG P S G P S G+P + GP+ + P +P P
Sbjct: 805 SSPGTPLSPGNPFS----------PGTPISPGPI--------------FPITSPPCHPSP 840
Query: 62 IPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPM 121
P +P+S SQ S P + P + S P P P S P T+P
Sbjct: 841 SP---FSPIS-------SQVSSNPSPHPTSSPLPFSSSTPEFPVPLSQCPWSSLPTTSPP 890
Query: 122 PSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSL 181
S + L P +P S T+ P ++ P +S ++ + V+ S
Sbjct: 891 TFSPTCSQVTLSSPF-----FPPCPS-TSSFPSTTAAPLLSLASAFSLAVMTVAQSLLSP 944
Query: 182 QNSFIKSGPSVP--PLVNPPLPTTFQPGAPHGPPP-------AGGPPPVRALTPLTSSYR 232
+ P P PL + PLP PG P P PPP R L P +
Sbjct: 945 SPGLLSQSPPAPPSPLPSLPLPPPVAPGGQESPSPHTAEVESEASPPPARPL-PGEARLA 1003
Query: 233 DVPQPLFNSAVNQEGITSNTNNGS-MVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVG 289
+ + V + +TS+ + + + + G +TPQLT+++ S G
Sbjct: 1004 PISEEGKPQLVGRFQVTSSKEPAEPLPLQPTSPTLSGSPKPSTPQLTSESSDTEDSAG 1061
>gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens]
Length = 922
Score = 54.7 bits (130), Expect = 5e-07
Identities = 92/339 (27%), Positives = 124/339 (36%), Gaps = 50/339 (14%)
Query: 29 PYTNGPV--QNALLSSQESVSQGYNFQLPGSY-----------PHPIPAKTLNPVSGQSN 75
PYT PV +N LS+ Q F P S P P T +PV ++
Sbjct: 213 PYTPNPVGTENEDLSNPSKPIQNQTFSTPASQLFSPHGSNPSTPAATPVPTASPVKAINH 272
Query: 76 YGGSQG---SGQTLNRP--PVASNPVTPSLHSGPAPRMPLP--------------ASQNP 116
S SG L PV V+ ++H+ P P +P P + +
Sbjct: 273 PSASAAATVSGMNLLNTVLPVFPGQVSSAVHT-PQPSIPNPTVIRTPSLPTAPVTSIHST 331
Query: 117 ATTPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSS 176
TTP+PS F +LP P T T SS+ S + T+ SS
Sbjct: 332 TTTPVPSI-FSGLVSLPGPSATPTAATPTPGPTPRSTLGSSEAFASTSAPFTSLPFSTSS 390
Query: 177 GYPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQ 236
S N S SV + PLP T Q + P AGG TP + V
Sbjct: 391 SAASTSNPNSASLSSVFAGLPLPLPPTSQGLSNPTPVIAGGS------TPSVAGPLGVNS 444
Query: 237 PLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYS--YPS 294
PL ++ + +TSN N ++ S+ GL + LT +N S S PS
Sbjct: 445 PLLSAL--KGFLTSNDTN--LINSSALSSAVTSGLASLSSLTLQNSDSSASAPNKCYAPS 500
Query: 295 LPPGYQNTTPPGAT---GVPPSSLNYPSGPQAF-TQTPL 329
P Q T+ PG G+P N S P Q+PL
Sbjct: 501 AIPTPQRTSTPGLALFPGLPSPVANSTSTPLTLPVQSPL 539
>gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens]
Length = 944
Score = 54.7 bits (130), Expect = 5e-07
Identities = 92/339 (27%), Positives = 124/339 (36%), Gaps = 50/339 (14%)
Query: 29 PYTNGPV--QNALLSSQESVSQGYNFQLPGSY-----------PHPIPAKTLNPVSGQSN 75
PYT PV +N LS+ Q F P S P P T +PV ++
Sbjct: 235 PYTPNPVGTENEDLSNPSKPIQNQTFSTPASQLFSPHGSNPSTPAATPVPTASPVKAINH 294
Query: 76 YGGSQG---SGQTLNRP--PVASNPVTPSLHSGPAPRMPLP--------------ASQNP 116
S SG L PV V+ ++H+ P P +P P + +
Sbjct: 295 PSASAAATVSGMNLLNTVLPVFPGQVSSAVHT-PQPSIPNPTVIRTPSLPTAPVTSIHST 353
Query: 117 ATTPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSS 176
TTP+PS F +LP P T T SS+ S + T+ SS
Sbjct: 354 TTTPVPSI-FSGLVSLPGPSATPTAATPTPGPTPRSTLGSSEAFASTSAPFTSLPFSTSS 412
Query: 177 GYPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQ 236
S N S SV + PLP T Q + P AGG TP + V
Sbjct: 413 SAASTSNPNSASLSSVFAGLPLPLPPTSQGLSNPTPVIAGGS------TPSVAGPLGVNS 466
Query: 237 PLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYS--YPS 294
PL ++ + +TSN N ++ S+ GL + LT +N S S PS
Sbjct: 467 PLLSAL--KGFLTSNDTN--LINSSALSSAVTSGLASLSSLTLQNSDSSASAPNKCYAPS 522
Query: 295 LPPGYQNTTPPGAT---GVPPSSLNYPSGPQAF-TQTPL 329
P Q T+ PG G+P N S P Q+PL
Sbjct: 523 AIPTPQRTSTPGLALFPGLPSPVANSTSTPLTLPVQSPL 561
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 53.5 bits (127), Expect = 1e-06
Identities = 93/351 (26%), Positives = 119/351 (33%), Gaps = 102/351 (29%)
Query: 55 PGSYPHPIPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQ 114
P S P P+P+ T P+ + GS PPV P PS GP P P P ++
Sbjct: 180 PDSIPPPVPS-TPRPIQSSPHNRGS---------PPVPGGPRQPS--PGPTPP-PFPGNR 226
Query: 115 NPAT-------TPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSL 167
A +P+ SSS P +N PP P T S+ P V
Sbjct: 227 GTALGGGSIRQSPLSSSS--PFSNRPP-------LPPTPSRALDDKPPPPPPPVGNR--- 274
Query: 168 TTNHQYVSSGYPSLQNSFIKSGPSVPPLVN-PPLPTTFQPGAPHGPPPAGGPPPVRALTP 226
PS+ + P PP N PP+P+T +P A PP PP
Sbjct: 275 -----------PSIHREAV---PPPPPQNNKPPVPSTPRPSASSQAPPPPPPPS------ 314
Query: 227 LTSSYRDVPQPLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSR 286
R P PL S+ S DE TP+L +N +S
Sbjct: 315 -----RPGPPPLPPSS------------------SGNDE--------TPRLPQRNLSLSS 343
Query: 287 SVGYSYPSLP-PGYQNTTPPGATGVPPSSLNYP---SGP---------QAFTQTPLGANH 333
S P LP PG PP + PP + P SGP T L A
Sbjct: 344 ST----PPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATP 399
Query: 334 LTTSMSGLSLQPEGLRVVNLLQERNMLPSTPLKPPVPNLHEDIQKLNCNPE 384
S SG+ G R L +R + P PP ++ Q C E
Sbjct: 400 QLPSRSGVDSPRSGPR-PPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCEDE 449
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 53.5 bits (127), Expect = 1e-06
Identities = 93/351 (26%), Positives = 119/351 (33%), Gaps = 102/351 (29%)
Query: 55 PGSYPHPIPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQ 114
P S P P+P+ T P+ + GS PPV P PS GP P P P ++
Sbjct: 180 PDSIPPPVPS-TPRPIQSSPHNRGS---------PPVPGGPRQPS--PGPTPP-PFPGNR 226
Query: 115 NPAT-------TPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSL 167
A +P+ SSS P +N PP P T S+ P V
Sbjct: 227 GTALGGGSIRQSPLSSSS--PFSNRPP-------LPPTPSRALDDKPPPPPPPVGNR--- 274
Query: 168 TTNHQYVSSGYPSLQNSFIKSGPSVPPLVN-PPLPTTFQPGAPHGPPPAGGPPPVRALTP 226
PS+ + P PP N PP+P+T +P A PP PP
Sbjct: 275 -----------PSIHREAV---PPPPPQNNKPPVPSTPRPSASSQAPPPPPPPS------ 314
Query: 227 LTSSYRDVPQPLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSR 286
R P PL S+ S DE TP+L +N +S
Sbjct: 315 -----RPGPPPLPPSS------------------SGNDE--------TPRLPQRNLSLSS 343
Query: 287 SVGYSYPSLP-PGYQNTTPPGATGVPPSSLNYP---SGP---------QAFTQTPLGANH 333
S P LP PG PP + PP + P SGP T L A
Sbjct: 344 ST----PPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATP 399
Query: 334 LTTSMSGLSLQPEGLRVVNLLQERNMLPSTPLKPPVPNLHEDIQKLNCNPE 384
S SG+ G R L +R + P PP ++ Q C E
Sbjct: 400 QLPSRSGVDSPRSGPR-PPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCEDE 449
>gi|31543543 retinoic acid induced 17 [Homo sapiens]
Length = 1067
Score = 53.1 bits (126), Expect = 1e-06
Identities = 67/235 (28%), Positives = 87/235 (37%), Gaps = 32/235 (13%)
Query: 1 MSQPGI--PASGGA---PASLQAQNGAALASGSPYTNGPVQNALLSSQESVSQGYNFQL- 54
M+QPG PAS G PAS+ A + SG P + +S + Q Q
Sbjct: 331 MNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTY 390
Query: 55 PGSYPHPIPAKTLN-PVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPAS 113
PG P +P + + P G+ NYG Q P + P P + P P PL +
Sbjct: 391 PGPRPQSLPIQNIKRPYPGEPNYGNQQYG-------PNSQFPTQPGQYPAPNPPRPLTSP 443
Query: 114 QNPATT--PMPSSSFLPEANLPPPLNW-QYNYPSTASQTNHCPRASSQPTVS-GNTSLTT 169
P PSS P PP +N QY P + N+ SS S GN +
Sbjct: 444 NYPGQRMPSQPSSGQYP----PPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPP 499
Query: 170 NH----QYVSSGYPSLQNSFIKSGPSVPPL------VNPPLPTTFQPGAPHGPPP 214
Y S P + G S+PP V PP P +P PPP
Sbjct: 500 RPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPP 554
Score = 32.0 bits (71), Expect = 3.3
Identities = 77/360 (21%), Positives = 118/360 (32%), Gaps = 50/360 (13%)
Query: 27 GSPYTNG-PVQNALLSSQESVSQGYNFQLPGSYPHPIPAKTLNPVSGQSNYGGSQGSGQT 85
G+P +G N L+S + Q F P +++ G+ NY GS G G +
Sbjct: 197 GNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMY---GRPNYPGSGGFGAS 253
Query: 86 LNRPPVASNPVTPSLHSGPAPRMPLPASQ------NPATTPMPSSSFLPEANLPPPLNWQ 139
P A + H+ P PA+ A +++ A L N
Sbjct: 254 YPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKD 313
Query: 140 YN-YPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPSVPPL-VN 197
N Y + + +QP G S+ S S+ SG S PP+ +N
Sbjct: 314 INQYGPMGPTQAYNSQFMNQPGPRGPASMGG-----SMNPASMAAGMTPSGMSGPPMGMN 368
Query: 198 PPLPTTFQPGAPHGP--PPAGGPPPVRALTPLTSSYRDVPQPLFNSAVNQEGITSNTNNG 255
P P P HG P P P P+ + R P N N
Sbjct: 369 QPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPG------------EPNYGNQ 416
Query: 256 SMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQNTTPPGATGVPPSSL 315
+S + G P P+ S Y PG + + P + PP ++
Sbjct: 417 QYGPNSQFPTQPGQYPAPNP------PRPLTSPNY------PGQRMPSQPSSGQYPPPTV 464
Query: 316 NYPS--GPQAF---TQTPLGANHLTTSMSGLSLQPEGLRVVNLLQERNMLPSTPLKPPVP 370
N P+ F T G+++ S ++ P + V N + +P P P P
Sbjct: 465 NMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVAN--YPHSPVPGNPTPPMTP 522
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 52.0 bits (123), Expect = 3e-06
Identities = 76/305 (24%), Positives = 108/305 (35%), Gaps = 28/305 (9%)
Query: 62 IPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPM 121
+P + S G+ T P V S+ TP S P LPA ++ ATTP
Sbjct: 3736 VPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATP--FSSPGTATALPALRSTATTPT 3793
Query: 122 PSS-SFLPEANLPPPLNW-QYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYP 179
+S + +P ++L W + + +T + T SS P + +++ T +
Sbjct: 3794 ATSFTAIPSSSL--GTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATG 3851
Query: 180 SLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPV---RALTPLTSSYRDVPQ 236
S+ G + V P TT P P PPV TP TS P
Sbjct: 3852 SVATPSSTPGTAHTTKV-PTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPS 3910
Query: 237 PLFNSAVNQEGITSNTN---NGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYP 293
+ + +T+ T GSM SS + G P L ++ + + P
Sbjct: 3911 SVPGTTHTPTVLTTTTTTVATGSMATPSSSTQTSG----TPPSLITTATTITATGSTTNP 3966
Query: 294 SLPPGYQNTTP-------PGATGVPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQPE 346
S PG TTP T SS PS T TP N T + G SL P
Sbjct: 3967 SSTPG---TTPIPPVLTTTATTPAATSSTVTPSSALGTTHTPPVPN-TTATTHGRSLSPS 4022
Query: 347 GLRVV 351
V
Sbjct: 4023 SPHTV 4027
Score = 51.2 bits (121), Expect = 5e-06
Identities = 73/282 (25%), Positives = 104/282 (36%), Gaps = 28/282 (9%)
Query: 85 TLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSS-SFLPEANLPPPLNW-QYNY 142
T P V S+ TPS S P LPA ++ ATTP +S + +P ++L W + +
Sbjct: 1945 TATTPTVTSSKATPS--SSPGTATALPALRSTATTPTATSVTPIPSSSL--GTTWTRLSQ 2000
Query: 143 PSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPPLPT 202
+T + T SS P + +++ T + S+ G + V P T
Sbjct: 2001 TTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGSVATPSSTPGTAHTTKV-PTTTT 2059
Query: 203 TFQPGAPHGPPPAGGPPPV---RALTPLTSSYRDVPQPLFNSAVNQEGITSNTN---NGS 256
T P P PPV TP T P + + +T+ T GS
Sbjct: 2060 TGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPGTTHTATVLTTTTTTVATGS 2119
Query: 257 MVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQNTTP-------PGATG 309
M SS + G P LT ++ + + PS PG TTP T
Sbjct: 2120 MATPSSSTQTSG----TPPSLTTTATTITATGSTTNPSSTPG---TTPIPPVLTTTATTP 2172
Query: 310 VPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQPEGLRVV 351
S+ PS T TP N + T+ G SL P V
Sbjct: 2173 AATSNTVTPSSALGTTHTPPVPNTMATT-HGRSLPPSSPHTV 2213
Score = 50.8 bits (120), Expect = 7e-06
Identities = 76/283 (26%), Positives = 104/283 (36%), Gaps = 30/283 (10%)
Query: 85 TLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSS-SFLPEANLPPPLNWQYNYP 143
T P V S+ TPS S P LPA ++ ATTP +S + +P ++L + +
Sbjct: 3202 TATTPTVISSRATPS--SSPGTATALPALRSTATTPTATSVTAIPSSSLGTAWT-RLSQT 3258
Query: 144 STASQTNHCPRASSQP-TVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPP-LP 201
+T + T SS P TV +T LTT + + + S P + +P
Sbjct: 3259 TTPTATMSTATPSSTPETVHTSTVLTTTTTTTRA------TGSVATPSSTPGTAHTTKVP 3312
Query: 202 TTFQPG---APHGPPPAGGPPPV---RALTPLTSSYRDVPQPLFNSAVNQEGITSNTNN- 254
TT G P P PPV TP T P + + +T+ T
Sbjct: 3313 TTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPGTTHTATVLTTTTTTV 3372
Query: 255 --GSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQNTTP----PGAT 308
GSM SS + G P LT ++ + + PS PG P T
Sbjct: 3373 ATGSMATPSSSTQTSG----TPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATT 3428
Query: 309 GVPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQPEGLRVV 351
SS PS T TP N T + G SL P V
Sbjct: 3429 PAATSSTVTPSSALGTTHTPPVPN-TTATTHGRSLPPSSPHTV 3470
Score = 50.8 bits (120), Expect = 7e-06
Identities = 72/297 (24%), Positives = 105/297 (35%), Gaps = 33/297 (11%)
Query: 62 IPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPM 121
+P + S G+ T P V S+ TPS S P LPA ++ ATTP
Sbjct: 4464 VPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPS--SSPGTATALPALRSTATTPT 4521
Query: 122 PSS-SFLPEANLPPPLNW-QYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYP 179
+S + +P ++L W + + +T + T SS P +++ T +
Sbjct: 4522 ATSFTAIPSSSL--GTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTATATTTGATG 4579
Query: 180 SLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPV--------RALTPLTSSY 231
S+ G + V P TT P P PPV TP TS
Sbjct: 4580 SVATPSSTPGTAHTTKV-PTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTTTPTTSGS 4638
Query: 232 RDVPQPLFNSAVNQEGITSNTN---NGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSV 288
P + + +T+ T GSM SS + G P LT ++ +
Sbjct: 4639 TVTPSSIPGTTHTARVLTTTTTTVATGSMATPSSSTQTSG----TPPSLTTTATTITATG 4694
Query: 289 GYSYPSLPPGYQNTTP--------PGATGVPPSSLNYPSGPQAFTQTPLGANHLTTS 337
+ PS PG TP P AT S S P+ T P+ + T S
Sbjct: 4695 STTNPSSTPGTTPITPVLTSTATTPAATS---SKATSSSSPRTATTLPVLTSTATKS 4748
Score = 47.8 bits (112), Expect = 6e-05
Identities = 77/304 (25%), Positives = 109/304 (35%), Gaps = 26/304 (8%)
Query: 62 IPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPM 121
+P + S G+ T P V S+ TP S P LPA ++ ATTP
Sbjct: 2479 VPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATP--FSSPGTATALPALRSTATTPT 2536
Query: 122 PSS-SFLPEANLPPPLNW-QYNYPSTASQTNHCPRASSQP-TVSGNTSLTTNHQYV-SSG 177
+S + +P ++L W + + +T + T SS P TV +T LTT ++G
Sbjct: 2537 ATSFTAIPSSSLGT--TWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTATTTGATG 2594
Query: 178 YPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPV---RALTPLTSSYRDV 234
+ +S + + L TT P P PV TP T
Sbjct: 2595 SVATPSSTPGTAHTTKVLTTT---TTGFTATPSSSPGTARTLPVWISTTTTPTTRGSTVT 2651
Query: 235 PQPLFNSAVNQEGITSNTNN---GSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYS 291
P + + +T+ T GSM SS + G P LT ++ + +
Sbjct: 2652 PSSIPGTTHTPTVLTTTTTTVATGSMATPSSSTQTSG----TPPSLTTTATTITATGSTT 2707
Query: 292 YPSLPPGYQNTTP----PGATGVPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQPEG 347
PS PG P T SS PS T TP N T + G SL P
Sbjct: 2708 NPSSTPGTTPIPPVLTTTATTPAATSSTVTPSSALGTTHTPPVPN-TTATTHGRSLSPSS 2766
Query: 348 LRVV 351
V
Sbjct: 2767 PHTV 2770
Score = 44.7 bits (104), Expect = 5e-04
Identities = 74/330 (22%), Positives = 108/330 (32%), Gaps = 48/330 (14%)
Query: 64 AKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPS 123
A T + + G+ T P + T + S P P + TTP S
Sbjct: 3844 ATTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTS 3903
Query: 124 SSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQN 183
S + PS+ T H P T LTT V++G + +
Sbjct: 3904 GSTVT--------------PSSVPGTTHTP-----------TVLTTTTTTVATGSMATPS 3938
Query: 184 SFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPV------RALTPLTSSYRDVP-Q 236
S ++ + P L+ T G+ P G P+ A TP +S P
Sbjct: 3939 SSTQTSGTPPSLITTATTIT-ATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSS 3997
Query: 237 PLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSY-PSL 295
L + T+ T +G + SS + AT S G S+ P+
Sbjct: 3998 ALGTTHTPPVPNTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAA 4057
Query: 296 PPGYQNTTPPGATGVPPSSLNYPSGPQAFTQTPLGANHLT-TSMSGLSLQPEGLRVVNLL 354
G + P + PSS S P T TP H T TS + + P R L
Sbjct: 4058 TTGTTQHSTPALSSPHPSSRTTESPPSPGTTTP---GHTTATSRTTATATPSKTRTSTL- 4113
Query: 355 QERNMLPSTPLKPPVPNLHEDIQKLNCNPE 384
LPS+P P+ + C P+
Sbjct: 4114 -----LPSSPTSAPITT----VVTTGCEPQ 4134
Score = 38.9 bits (89), Expect = 0.027
Identities = 69/335 (20%), Positives = 109/335 (32%), Gaps = 58/335 (17%)
Query: 64 AKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPS 123
A T + + G+ T P + T + S P + P + TTP
Sbjct: 2030 ATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTR 2089
Query: 124 SSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQN 183
S + +++P T T LTT V++G + +
Sbjct: 2090 GSTVTPSSIP-------------------------GTTHTATVLTTTTTTVATGSMATPS 2124
Query: 184 SFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPV------RALTPLTSSYRDVP-Q 236
S ++ PP + T G+ P G P+ A TP +S P
Sbjct: 2125 SSTQTS-GTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSNTVTPSS 2183
Query: 237 PLFNSAVNQEGITSNTNNGSMVVHSSYDEIE------GGGLLATPQLTNKNPKMSRSVGY 290
L + T T +G + SS + G+L T +T + S ++
Sbjct: 2184 ALGTTHTPPVPNTMATTHGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTSHTL-- 2241
Query: 291 SYPSLPPGYQNTTPPGATGVPPSSLNYPSGPQAFTQTPLGANHLT-TSMSGLSLQPEGLR 349
+ G + P + PSS S P T TP H T TS + + P R
Sbjct: 2242 ---AATTGTTQHSTPALSSPHPSSRTTESPPSPGTTTP---GHTTATSRTTATATPSKTR 2295
Query: 350 VVNLLQERNMLPSTPLKPPVPNLHEDIQKLNCNPE 384
L LPS+P P+ + + C P+
Sbjct: 2296 TSTL------LPSSPTSAPITT----VVTMGCEPQ 2320
Score = 36.2 bits (82), Expect = 0.17
Identities = 65/317 (20%), Positives = 103/317 (32%), Gaps = 56/317 (17%)
Query: 81 GSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSSSFLPEANLPPPLNWQY 140
G+ T P + T + S P + P + TTP S + +++P
Sbjct: 3304 GTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIP------- 3356
Query: 141 NYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPPL 200
T T LTT V++G + +S ++ PP +
Sbjct: 3357 ------------------GTTHTATVLTTTTTTVATGSMATPSSSTQTS-GTPPSLTTTA 3397
Query: 201 PTTFQPGAPHGPPPAGGPPPV------RALTPLTSSYRDVP-QPLFNSAVNQEGITSNTN 253
T G+ P G P+ A TP +S P L + T+ T
Sbjct: 3398 TTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSSALGTTHTPPVPNTTATT 3457
Query: 254 NGSMVVHSSYDEIE------GGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQNTTPPGA 307
+G + SS + G+L T +T + S + P+ + P
Sbjct: 3458 HGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTSHT-----PAATTSTTQHSTPAL 3512
Query: 308 TGVPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQPEGLRVVNLLQERNMLPSTPLKP 367
+ PSS S P T TP + TS + + P R L LPS+P
Sbjct: 3513 SSPHPSSRTTESPPSPGTTTP--GHTRGTSRTTATATPSKTRTSTL------LPSSPTSA 3564
Query: 368 PVPNLHEDIQKLNCNPE 384
P+ + C P+
Sbjct: 3565 PITT----VVTTGCEPQ 3577
Score = 35.0 bits (79), Expect = 0.39
Identities = 51/227 (22%), Positives = 85/227 (37%), Gaps = 12/227 (5%)
Query: 118 TTPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSG 177
+TP SS+ P + P W P+T + T +++ PT + T+ ++
Sbjct: 1890 STPATSSTATPSST--PGTTWILTKPTTTATTTASTGSTATPTSTLRTAPPPKVLTTTAT 1947
Query: 178 YPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQP 237
P++ +S K+ PS P LP + A + P P +L + P
Sbjct: 1948 TPTVTSS--KATPSSSPGTATALP-ALRSTATTPTATSVTPIPSSSLGTTWTRLSQTTTP 2004
Query: 238 LFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQL------TNKNPKMSRSVGYS 291
+ T T + S V+ ++ G +ATP T K P + + +
Sbjct: 2005 TATMSTATPSSTPETAHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTA 2064
Query: 292 YPSLPPGYQNTTPPG-ATGVPPSSLNYPSGPQAFTQTPLGANHLTTS 337
PS PG T P +T P++ P + T A LTT+
Sbjct: 2065 TPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPGTTHTATVLTTT 2111
Score = 30.8 bits (68), Expect = 7.3
Identities = 68/324 (20%), Positives = 107/324 (33%), Gaps = 27/324 (8%)
Query: 118 TTPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSG 177
TT S+ P + P W PST + T P S+ S + T H ++
Sbjct: 4433 TTASTGSTATPSST--PGTTWILTEPSTTA-TVTVPTGSTATASSTQATAGTPHVSTTAT 4489
Query: 178 YPSLQNSFIKSGPSVPPLVNPPLPTTFQPGA-PHGPPPAGGPPPVRALTPLTSSYRDVPQ 236
P++ +S K+ PS P LP P P T S P
Sbjct: 4490 TPTVTSS--KATPSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTTTPT 4547
Query: 237 PLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTN---KNPKMSRSVGYSYP 293
++A T T + S V+ ++ G +ATP T K+ + +
Sbjct: 4548 ATMSTATPSS--TPETVHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFT 4605
Query: 294 SLPPGYQNTTPPGATGVPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQPEGLRVVNL 353
+ P ++ PG PP ++ + P T T G+ +S+ G + L
Sbjct: 4606 ATP-----SSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGTTHTARVLTTTTT 4660
Query: 354 LQERNMLPSTPLKPPVPNLHEDIQKLNCNPELFRCTLTSIPQTQALLNKAKLPLGLLLHP 413
+ +TP + + P T T+I T + N + P + P
Sbjct: 4661 TVATGSM-ATP---------SSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPITP 4710
Query: 414 -FKDLVQLPVVTSSTIVRCRSCRT 436
P TSS S RT
Sbjct: 4711 VLTSTATTPAATSSKATSSSSPRT 4734
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 51.6 bits (122), Expect = 4e-06
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 9/155 (5%)
Query: 90 PVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSSSFLPEANLPPPLNWQYNYPSTASQT 149
P+ +P++P S P+P + P S P +P+ S F PPP + P AS+
Sbjct: 514 PLEESPLSPPEESPPSPALETPLSPPPEASPL-SPPFEESPLSPPPEELPTSPPPEASRL 572
Query: 150 NHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQP--- 206
+ P S + ++ + S +P + S + P PL PP + P
Sbjct: 573 SPPPEESPMSPPPEESPMSPPPE-ASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPE 631
Query: 207 GAPHGPPPAGGP----PPVRALTPLTSSYRDVPQP 237
+P PPP P P V L+PL R P P
Sbjct: 632 DSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPP 666
Score = 38.5 bits (88), Expect = 0.035
Identities = 46/163 (28%), Positives = 60/163 (36%), Gaps = 35/163 (21%)
Query: 2 SQPGIPASGGAPA--SLQAQNGAALASG------SPYTNGPVQNALLSSQESVSQGYNFQ 53
S G+P G P L+AQ LA SP +Q L+ Q SQ Q
Sbjct: 4181 SGQGLPGVGIMPTVGQLRAQLQGVLAKNPQLRHLSPQQQQQLQALLMQRQLQQSQAVR-Q 4239
Query: 54 LPGSYPHPIPAKTLNPVSG----QSNYGG----------SQGSGQTLNRPP--------V 91
P P+ P +P+ G Q GG G+G PP +
Sbjct: 4240 TP---PYQEPGTQTSPLQGLLGCQPQLGGFPGPQTGPLQELGAGPRPQGPPRLPAPPGAL 4296
Query: 92 ASNPVTPSLHSGPAPRMPLPASQNPATTPMPSSSFLPEANLPP 134
++ PV +H P P P + P+ P PSS EA LPP
Sbjct: 4297 STGPVLGPVHPTPPPSSP-QEPKRPSQLPSPSSQLPTEAQLPP 4338
Score = 35.0 bits (79), Expect = 0.39
Identities = 38/140 (27%), Positives = 49/140 (35%), Gaps = 20/140 (14%)
Query: 89 PPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSSSFLPEANLPPPLNWQYNYPSTASQ 148
P ++ P P L P P S+ P +P P S L PPL+ + P +
Sbjct: 813 PHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRPEESHLSPELEKPPLSPRPEKP--PEE 870
Query: 149 TNHCPRASSQPTV--SGNTSLTTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQP 206
CP P G SL+ G P+L S P PPL P P
Sbjct: 871 PGQCPAPEELPLFPPPGEPSLSP-----LLGEPAL------SEPGEPPLSPLPEELPLSP 919
Query: 207 G-----APHGPPPAGGPPPV 221
+P PP PPP+
Sbjct: 920 SGEPSLSPQLMPPDPLPPPL 939
Score = 32.7 bits (73), Expect = 1.9
Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 24/157 (15%)
Query: 89 PPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSSSFLPEA-----------NLPPPLN 137
PP +P++P P P + +P +P+S LPEA PPP
Sbjct: 442 PPPEESPLSPPPEESPTSPPPEASRLSPPPEELPASP-LPEALHLSRPLEESPLSPPPEE 500
Query: 138 WQYNYPSTAS------QTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPS 191
+ P +S ++ P S P+ + T L+ + S P + S + P
Sbjct: 501 SPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPE-ASPLSPPFEESPLSPPPE 559
Query: 192 VPPLVNPPLPTTFQP---GAPHGPPPAGGP--PPVRA 223
P PP + P +P PPP P PP A
Sbjct: 560 ELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEA 596
Score = 32.7 bits (73), Expect = 1.9
Identities = 69/317 (21%), Positives = 102/317 (32%), Gaps = 49/317 (15%)
Query: 90 PVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSSSFLPEANLPPPLN------------ 137
P S P P L P +PL S P+ +P +P LPPPL+
Sbjct: 898 PALSEPGEPPLSPLPE-ELPLSPSGEPSLSPQ----LMPPDPLPPPLSPIITAAAPPALS 952
Query: 138 --WQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPSVP-- 193
+ YP A + + P + T ++ + + + + P P
Sbjct: 953 PLGELEYPFGAKGDSDPESPLAAPIL--ETPISPPPEANCTDPEPVPPMILPPSPGSPVG 1010
Query: 194 ---PLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQPLFNSAVNQEGITS 250
P++ PLP P H P PP + L S VP PL S + + S
Sbjct: 1011 PASPILMEPLPPQCSPLLQHSLVPQNSPPSQCSPPALPLS---VPSPL--SPIGKVVGVS 1065
Query: 251 NTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQNTTPPGATGV 310
+ + E E L P T+ P + PS P + + G
Sbjct: 1066 DEAELHEMETEKVSEPECPAL--EPSATSPLPSPMGDLSCPAPSPAPALDDFSGLGEDTA 1123
Query: 311 PPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQPEGLRVVNLLQ--------------- 355
P ++ P QTP G+ S + L PE L V ++
Sbjct: 1124 PLDGIDAPGSQPEPGQTP-GSLASELKGSPVLLDPEELAPVTPMEVYPECKQTAGQGSPC 1182
Query: 356 ERNMLPSTPLKPPVPNL 372
E P P+ P P L
Sbjct: 1183 EEQEEPRAPVAPTPPTL 1199
Score = 30.4 bits (67), Expect = 9.6
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 69 PVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTP 120
PV+GQS G+ GSG P S +T + S P P P S P T P
Sbjct: 4584 PVNGQSQLRGAFGSGALPTGPDYYSQLLTKNNLSNP----PTPPSSLPPTPP 4631
>gi|31543535 R3H domain containing 1 [Homo sapiens]
Length = 1099
Score = 51.6 bits (122), Expect = 4e-06
Identities = 73/307 (23%), Positives = 106/307 (34%), Gaps = 59/307 (19%)
Query: 26 SGSPYTNGPVQNALLSSQESVSQGYNFQLPGSYPHPIPAKTLNPVSG----QSNYGGSQG 81
+G P+ N P + ++ + Q Q+PG P+PA P + Q N G SQ
Sbjct: 491 TGQPFIN-PDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQDNLG-SQF 548
Query: 82 SGQTLNRPPVA--SNPVTPSLHSGPAPRMPLPASQNPATTPMPSSSFLPEANLPPPLNWQ 139
S +L R P A S+P S + P + P P P PPP
Sbjct: 549 SHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPP---- 604
Query: 140 YNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPP 199
P QP + Y +SG+P Q + G P +P
Sbjct: 605 -------------PLPPGQPVPTAG--------YPASGHPVSQPVLQQQGYIQQP--SPQ 641
Query: 200 LPTTF-QPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQPLFNSAVNQEGITSNTNNGSMV 258
+P + PG H P YR VP +NS +NQ G V
Sbjct: 642 MPACYCAPGHYHSSQP---------------QYRPVPSVHYNSHLNQPLPQPAQQTGYQV 686
Query: 259 VHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYS-------YPSLPPGYQNTTPPGATGVP 311
+ + +G + PQ + S+G Y S+P YQ + P G+ G+P
Sbjct: 687 IPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPT-YQVSLPQGSQGIP 745
Query: 312 PSSLNYP 318
+ P
Sbjct: 746 HQTYQQP 752
Score = 38.9 bits (89), Expect = 0.027
Identities = 85/376 (22%), Positives = 133/376 (35%), Gaps = 55/376 (14%)
Query: 8 ASGGAPASLQA--QNGAALASGSPYTNGPVQNALLSSQESVSQGYNFQLPGSYPHPIPAK 65
ASG + S Q+ +N + P+++ ++L + + +V++ +F I
Sbjct: 336 ASGRSTNSHQSSTENELKYSEPRPWSSTDSDSSLRNLKPAVTKASSFS-------GISVL 388
Query: 66 TLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSSS 125
T SG S G + + V S+ + S P P L S + A P+ S
Sbjct: 389 TRGDSSGSSKSIGRLSKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVS 448
Query: 126 FLPEANLPPPLNWQYNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSF 185
+ LN Q PST+ A P S+ N Q +G P F
Sbjct: 449 THSSLSFDGGLNGQVASPSTSFFLLPLEAAGIPPG-----SILINPQ---TGQP-----F 495
Query: 186 IKSGPSVPPLVNPPL---PTTFQ-PGAPHGPPPAGGPPPVRALTPLTSSYRDVPQPLFNS 241
I S P + NPP+ P Q PG P P PA PP QP N
Sbjct: 496 INPDGS-PVVYNPPMTQQPVRSQVPGPPQPPLPA---PP--------------QQPAANH 537
Query: 242 AVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQN 301
+Q+ + S ++ S+ S D + + + ++P+ S + + P P
Sbjct: 538 IFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPP 597
Query: 302 TTPPGATGVPPS----SLNYPSGPQAFTQTPLGANHLTTSMSGLSLQPEGLRVVNLLQER 357
PP +PP + YP+ +Q L G QP
Sbjct: 598 PPPPPPPPLPPGQPVPTAGYPASGHPVSQPVL-------QQQGYIQQPSPQMPACYCAPG 650
Query: 358 NMLPSTPLKPPVPNLH 373
+ S P PVP++H
Sbjct: 651 HYHSSQPQYRPVPSVH 666
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,546,129
Number of Sequences: 37866
Number of extensions: 2662689
Number of successful extensions: 19573
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 859
Number of HSP's that attempted gapping in prelim test: 13239
Number of HSP's gapped (non-prelim): 4612
length of query: 1093
length of database: 18,247,518
effective HSP length: 113
effective length of query: 980
effective length of database: 13,968,660
effective search space: 13689286800
effective search space used: 13689286800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.