Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 23397574
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23397574 sorting nexin 33 [Homo sapiens]
(574 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23397574 sorting nexin 33 [Homo sapiens] 1174 0.0
gi|157057545 sorting nexin 18 isoform a [Homo sapiens] 587 e-168
gi|224177511 sorting nexin 18 isoform c [Homo sapiens] 499 e-141
gi|157057543 sorting nexin 18 isoform b [Homo sapiens] 499 e-141
gi|7706706 sorting nexin 9 [Homo sapiens] 355 5e-98
gi|153791707 sorting nexin family member 30 [Homo sapiens] 72 2e-12
gi|23943858 sorting nexin 8 [Homo sapiens] 64 3e-10
gi|23111036 sorting nexin 1 isoform c [Homo sapiens] 57 5e-08
gi|19224660 protein kinase C and casein kinase substrate in neur... 55 2e-07
gi|23111034 sorting nexin 1 isoform a [Homo sapiens] 54 4e-07
gi|23111055 sorting nexin 7 isoform b [Homo sapiens] 54 4e-07
gi|194294540 sorting nexin 7 isoform a [Homo sapiens] 54 4e-07
gi|23111038 sorting nexin 2 [Homo sapiens] 54 5e-07
gi|23111032 sorting nexin 1 isoform b [Homo sapiens] 53 9e-07
gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 50 4e-06
gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 50 4e-06
gi|24308229 protein kinase C and casein kinase substrate in neur... 50 4e-06
gi|148747351 protein kinase C and casein kinase substrate in neu... 50 6e-06
gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens] 49 1e-05
gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens] 49 1e-05
gi|4885153 v-crk sarcoma virus CT10 oncogene homolog (avian)-lik... 49 2e-05
gi|5453710 LIM and SH3 protein 1 [Homo sapiens] 47 6e-05
gi|5453758 nebulette sarcomeric isoform [Homo sapiens] 46 8e-05
gi|47087157 nebulette non-muscle isoform [Homo sapiens] 46 8e-05
gi|38524622 formin binding protein 1 [Homo sapiens] 45 1e-04
gi|171906575 drebrin-like isoform c [Homo sapiens] 45 1e-04
gi|62198235 drebrin-like isoform b [Homo sapiens] 45 1e-04
gi|21361670 drebrin-like isoform a [Homo sapiens] 45 1e-04
gi|23111026 sorting nexin 11 [Homo sapiens] 45 1e-04
gi|23111028 sorting nexin 11 [Homo sapiens] 45 1e-04
>gi|23397574 sorting nexin 33 [Homo sapiens]
Length = 574
Score = 1174 bits (3036), Expect = 0.0
Identities = 574/574 (100%), Positives = 574/574 (100%)
Query: 1 MALKGRALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEIVR 60
MALKGRALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEIVR
Sbjct: 1 MALKGRALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEIVR 60
Query: 61 SGISTNHADYSSSPAGSPGAQVSLYNSPSVASPARSGGGSGFLSNQGSFEEDDDDDWDDW 120
SGISTNHADYSSSPAGSPGAQVSLYNSPSVASPARSGGGSGFLSNQGSFEEDDDDDWDDW
Sbjct: 61 SGISTNHADYSSSPAGSPGAQVSLYNSPSVASPARSGGGSGFLSNQGSFEEDDDDDWDDW 120
Query: 121 DDGCTVVEEPRAGGLGTNGHPPLNLSYPGAYPSQHMAFRPKPPLERQDSLASAKRGSVVG 180
DDGCTVVEEPRAGGLGTNGHPPLNLSYPGAYPSQHMAFRPKPPLERQDSLASAKRGSVVG
Sbjct: 121 DDGCTVVEEPRAGGLGTNGHPPLNLSYPGAYPSQHMAFRPKPPLERQDSLASAKRGSVVG 180
Query: 181 RNLNRFSCFVRSGVEAFILGDVPMMAKIAETYSIEMGPRGPQWKANPHPFACSVEDPTKQ 240
RNLNRFSCFVRSGVEAFILGDVPMMAKIAETYSIEMGPRGPQWKANPHPFACSVEDPTKQ
Sbjct: 181 RNLNRFSCFVRSGVEAFILGDVPMMAKIAETYSIEMGPRGPQWKANPHPFACSVEDPTKQ 240
Query: 241 TKFKGIKSYISYKLTPTHAASPVYRRYKHFDWLYNRLLHKFTVISVPHLPEKQATGRFEE 300
TKFKGIKSYISYKLTPTHAASPVYRRYKHFDWLYNRLLHKFTVISVPHLPEKQATGRFEE
Sbjct: 241 TKFKGIKSYISYKLTPTHAASPVYRRYKHFDWLYNRLLHKFTVISVPHLPEKQATGRFEE 300
Query: 301 DFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFLSCLDDKQWKMGKRRAEKDEMVGASFLL 360
DFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFLSCLDDKQWKMGKRRAEKDEMVGASFLL
Sbjct: 301 DFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFLSCLDDKQWKMGKRRAEKDEMVGASFLL 360
Query: 361 TFQIPTEHQDLQDVEDRVDTFKAFSKKMDDSVLQLSTVASELVRKHVGGFRKEFQKLGSA 420
TFQIPTEHQDLQDVEDRVDTFKAFSKKMDDSVLQLSTVASELVRKHVGGFRKEFQKLGSA
Sbjct: 361 TFQIPTEHQDLQDVEDRVDTFKAFSKKMDDSVLQLSTVASELVRKHVGGFRKEFQKLGSA 420
Query: 421 FQAISHSFQMDPPFCSEALNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLLS 480
FQAISHSFQMDPPFCSEALNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLLS
Sbjct: 421 FQAISHSFQMDPPFCSEALNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLLS 480
Query: 481 NFPDIIHLQKGAFAKVKESQRMSDEGRMVQDEADGIRRRCRVVGFALQAEMNHFHQRREL 540
NFPDIIHLQKGAFAKVKESQRMSDEGRMVQDEADGIRRRCRVVGFALQAEMNHFHQRREL
Sbjct: 481 NFPDIIHLQKGAFAKVKESQRMSDEGRMVQDEADGIRRRCRVVGFALQAEMNHFHQRREL 540
Query: 541 DFKHMMQNYLRQQILFYQRVGQQLEKTLRMYDNL 574
DFKHMMQNYLRQQILFYQRVGQQLEKTLRMYDNL
Sbjct: 541 DFKHMMQNYLRQQILFYQRVGQQLEKTLRMYDNL 574
>gi|157057545 sorting nexin 18 isoform a [Homo sapiens]
Length = 624
Score = 587 bits (1514), Expect = e-168
Identities = 318/631 (50%), Positives = 412/631 (65%), Gaps = 64/631 (10%)
Query: 1 MALKGRALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEIVR 60
MAL+ RALYDF SEN EIS+++ E L + SE ++GWL+G NSRG+ GLFPASYV+++R
Sbjct: 1 MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIR 60
Query: 61 S--------GISTNHADYSSSPAGS---------------PGAQVSLYNS-----PSVAS 92
+ G A Y++ P G P A +L PS
Sbjct: 61 APEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTFQ 120
Query: 93 PARSG----GGS----------GFLSNQGSFEEDDDDDWDD-WDDGCTVVEEPRAGGLGT 137
P +G GG+ G+ ++QGS DDDWDD WDD TV +EP G LG+
Sbjct: 121 PPGAGFPYGGGALQPSPQQLYGGYQASQGS-----DDDWDDEWDDSSTVADEP--GALGS 173
Query: 138 NGHPPLNLSYP---GAYPSQHMAFRPKPPLER-------QDSLASAKRGSVVGRNLNRFS 187
+P L+ S GA ++ R L Q + K + V RNLNRFS
Sbjct: 174 GAYPDLDGSSSAGVGAAGRYRLSTRSDLSLGSRGGSVPPQHHPSGPKSSATVSRNLNRFS 233
Query: 188 CFVRSGVEAFILGDVPMMAKIAETYSIEMGPRGPQWKANPHPFACSVEDPTKQTKFKGIK 247
FV+SG EAF+LG+ K + + +GP GP+W+ NP+PF C+++DPTKQTKFKG+K
Sbjct: 234 TFVKSGGEAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMK 293
Query: 248 SYISYKLTPTHAASPVYRRYKHFDWLYNRLLHKFTVISVPHLPEKQATGRFEEDFIEKRK 307
SYISYKL PTH PV+RRYKHFDWLY RL KF VISVPHLPEKQATGRFEEDFI KR+
Sbjct: 294 SYISYKLVPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRR 353
Query: 308 RRLILWMDHMTSHPVLSQYEGFQHFLSC---LDDKQWKMGKRRAEKDEMVGASFLLTFQI 364
+ LI WM+HM SHPVL+Q + FQHFL+C D+K WK GKR+AEKDEMVGA+F LT
Sbjct: 354 KGLIWWMNHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLST 413
Query: 365 -PTEHQDLQDVEDRVDTFKAFSKKMDDSVLQLSTVASELVRKHVGGFRKEFQKLGSAFQA 423
P DLQ+VE ++D FK F+KKMDDS LQL+ A+E RK V GF+KE+QK+G +F+
Sbjct: 414 PPAAALDLQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRG 473
Query: 424 ISHSFQMDPPFCSEALNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFP 483
+S +F++D S LN AI+ TG Y+AIGE+FAEQP+ DL ++D L+LYQG L+NFP
Sbjct: 474 LSQAFELDQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFP 533
Query: 484 DIIHLQKGAFAKVKESQRMSDEGRMVQDEADGIRRRCRVVGFALQAEMNHFHQRRELDFK 543
DIIH+QKGA KVKES+R +EG+M +ADGI+ RC + FA AE++HFHQ R DFK
Sbjct: 534 DIIHVQKGALTKVKESRRHVEEGKMEVQKADGIQDRCNTISFATLAEIHHFHQIRVRDFK 593
Query: 544 HMMQNYLRQQILFYQRVGQQLEKTLRMYDNL 574
MQ++L+QQI+F+Q+V Q+LE+ L YD++
Sbjct: 594 SQMQHFLQQQIIFFQKVTQKLEEALHKYDSV 624
>gi|224177511 sorting nexin 18 isoform c [Homo sapiens]
Length = 591
Score = 499 bits (1286), Expect = e-141
Identities = 275/548 (50%), Positives = 351/548 (64%), Gaps = 64/548 (11%)
Query: 1 MALKGRALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEIVR 60
MAL+ RALYDF SEN EIS+++ E L + SE ++GWL+G NSRG+ GLFPASYV+++R
Sbjct: 1 MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIR 60
Query: 61 S--------GISTNHADYSSSPAGS---------------PGAQVSLYNS-----PSVAS 92
+ G A Y++ P G P A +L PS
Sbjct: 61 APEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTFQ 120
Query: 93 PARSG----GGS----------GFLSNQGSFEEDDDDDWDD-WDDGCTVVEEPRAGGLGT 137
P +G GG+ G+ ++QGS DDDWDD WDD TV +EP G LG+
Sbjct: 121 PPGAGFPYGGGALQPSPQQLYGGYQASQGS-----DDDWDDEWDDSSTVADEP--GALGS 173
Query: 138 NGHPPLNLSYP---GAYPSQHMAFRPKPPLER-------QDSLASAKRGSVVGRNLNRFS 187
+P L+ S GA ++ R L Q + K + V RNLNRFS
Sbjct: 174 GAYPDLDGSSSAGVGAAGRYRLSTRSDLSLGSRGGSVPPQHHPSGPKSSATVSRNLNRFS 233
Query: 188 CFVRSGVEAFILGDVPMMAKIAETYSIEMGPRGPQWKANPHPFACSVEDPTKQTKFKGIK 247
FV+SG EAF+LG+ K + + +GP GP+W+ NP+PF C+++DPTKQTKFKG+K
Sbjct: 234 TFVKSGGEAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMK 293
Query: 248 SYISYKLTPTHAASPVYRRYKHFDWLYNRLLHKFTVISVPHLPEKQATGRFEEDFIEKRK 307
SYISYKL PTH PV+RRYKHFDWLY RL KF VISVPHLPEKQATGRFEEDFI KR+
Sbjct: 294 SYISYKLVPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRR 353
Query: 308 RRLILWMDHMTSHPVLSQYEGFQHFLSC---LDDKQWKMGKRRAEKDEMVGASFLLTFQI 364
+ LI WM+HM SHPVL+Q + FQHFL+C D+K WK GKR+AEKDEMVGA+F LT
Sbjct: 354 KGLIWWMNHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLST 413
Query: 365 -PTEHQDLQDVEDRVDTFKAFSKKMDDSVLQLSTVASELVRKHVGGFRKEFQKLGSAFQA 423
P DLQ+VE ++D FK F+KKMDDS LQL+ A+E RK V GF+KE+QK+G +F+
Sbjct: 414 PPAAALDLQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRG 473
Query: 424 ISHSFQMDPPFCSEALNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFP 483
+S +F++D S LN AI+ TG Y+AIGE+FAEQP+ DL ++D L+LYQG L+NFP
Sbjct: 474 LSQAFELDQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFP 533
Query: 484 DIIHLQKG 491
DIIH+QKG
Sbjct: 534 DIIHVQKG 541
>gi|157057543 sorting nexin 18 isoform b [Homo sapiens]
Length = 628
Score = 499 bits (1286), Expect = e-141
Identities = 275/548 (50%), Positives = 351/548 (64%), Gaps = 64/548 (11%)
Query: 1 MALKGRALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEIVR 60
MAL+ RALYDF SEN EIS+++ E L + SE ++GWL+G NSRG+ GLFPASYV+++R
Sbjct: 1 MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIR 60
Query: 61 S--------GISTNHADYSSSPAGS---------------PGAQVSLYNS-----PSVAS 92
+ G A Y++ P G P A +L PS
Sbjct: 61 APEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTFQ 120
Query: 93 PARSG----GGS----------GFLSNQGSFEEDDDDDWDD-WDDGCTVVEEPRAGGLGT 137
P +G GG+ G+ ++QGS DDDWDD WDD TV +EP G LG+
Sbjct: 121 PPGAGFPYGGGALQPSPQQLYGGYQASQGS-----DDDWDDEWDDSSTVADEP--GALGS 173
Query: 138 NGHPPLNLSYP---GAYPSQHMAFRPKPPLER-------QDSLASAKRGSVVGRNLNRFS 187
+P L+ S GA ++ R L Q + K + V RNLNRFS
Sbjct: 174 GAYPDLDGSSSAGVGAAGRYRLSTRSDLSLGSRGGSVPPQHHPSGPKSSATVSRNLNRFS 233
Query: 188 CFVRSGVEAFILGDVPMMAKIAETYSIEMGPRGPQWKANPHPFACSVEDPTKQTKFKGIK 247
FV+SG EAF+LG+ K + + +GP GP+W+ NP+PF C+++DPTKQTKFKG+K
Sbjct: 234 TFVKSGGEAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMK 293
Query: 248 SYISYKLTPTHAASPVYRRYKHFDWLYNRLLHKFTVISVPHLPEKQATGRFEEDFIEKRK 307
SYISYKL PTH PV+RRYKHFDWLY RL KF VISVPHLPEKQATGRFEEDFI KR+
Sbjct: 294 SYISYKLVPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRR 353
Query: 308 RRLILWMDHMTSHPVLSQYEGFQHFLSC---LDDKQWKMGKRRAEKDEMVGASFLLTFQI 364
+ LI WM+HM SHPVL+Q + FQHFL+C D+K WK GKR+AEKDEMVGA+F LT
Sbjct: 354 KGLIWWMNHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLST 413
Query: 365 -PTEHQDLQDVEDRVDTFKAFSKKMDDSVLQLSTVASELVRKHVGGFRKEFQKLGSAFQA 423
P DLQ+VE ++D FK F+KKMDDS LQL+ A+E RK V GF+KE+QK+G +F+
Sbjct: 414 PPAAALDLQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRG 473
Query: 424 ISHSFQMDPPFCSEALNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFP 483
+S +F++D S LN AI+ TG Y+AIGE+FAEQP+ DL ++D L+LYQG L+NFP
Sbjct: 474 LSQAFELDQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFP 533
Query: 484 DIIHLQKG 491
DIIH+QKG
Sbjct: 534 DIIHVQKG 541
>gi|7706706 sorting nexin 9 [Homo sapiens]
Length = 595
Score = 355 bits (912), Expect = 5e-98
Identities = 213/601 (35%), Positives = 310/601 (51%), Gaps = 39/601 (6%)
Query: 1 MALKGRALYDFHSE-NKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEIV 59
MA K R +YDF +E E+++ + E + I + GWL+G+N +GE GL P YVEI+
Sbjct: 1 MATKARVMYDFAAEPGNNELTVNEGEIITITNPDVGGGWLEGRNIKGERGLVPTDYVEIL 60
Query: 60 RSGISTNHADYSSSPAGSPGAQVSLYNSPSVASPARSGGGSGFLSNQGSFEEDDDDDWD- 118
S + G+ A + +S S AS A++ + ++Q D W
Sbjct: 61 PSDGKDQFS------CGNSVADQAFLDSLS-ASTAQASSSAASNNHQVGSGNDPWSAWSA 113
Query: 119 ----DWDDGCTVVEEPRAGGLGTNGHPPLNLSYPGAYPSQHMAFR-------------PK 161
+W+ +P G N + P N +P + PK
Sbjct: 114 SKSGNWESSEGWGAQPEGAGAQRNTNTPNNWDTAFGHPQAYQGPATGDDDDWDEDWDGPK 173
Query: 162 PPLERQDSLASAKRGSVVGRN----------LNRFSCFVRSGVEAFILGDVPMMAKIAET 211
+DS ++ G+ G + LN+F F + G E ++L +AK E
Sbjct: 174 SSSYFKDSESADAGGAQRGNSRASSSSMKIPLNKFPGFAKPGTEQYLLAK--QLAKPKEK 231
Query: 212 YSIEMGPRGPQWKANPHPFACSVEDPTKQTKFKGIKSYISYKLTPTHAASPVYRRYKHFD 271
I +G GP W F C V DP K +K G+KSYI Y+LTPT+ V RYKHFD
Sbjct: 232 IPIIVGDYGPMWVYPTSTFDCVVADPRKGSKMYGLKSYIEYQLTPTNTNRSVNHRYKHFD 291
Query: 272 WLYNRLLHKF-TVISVPHLPEKQATGRFEEDFIEKRKRRLILWMDHMTSHPVLSQYEGFQ 330
WLY RLL KF + I +P LP+KQ TGRFEE+FI+ R RL WM M HPV+S+ E FQ
Sbjct: 292 WLYERLLVKFGSAIPIPSLPDKQVTGRFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQ 351
Query: 331 HFLSCLDDKQWKMGKRRAEKDEMVGASFLLTFQIPTEHQDLQDVEDRVDTFKAFSKKMDD 390
FL+ D+K+WK GKR+AE+DE+ G T + DL ++E + + F+K MDD
Sbjct: 352 QFLNFRDEKEWKTGKRKAERDELAGVMIFSTMEPEAPDLDLVEIEQKCEAVGKFTKAMDD 411
Query: 391 SVLQLSTVASELVRKHVGGFRKEFQKLGSAFQAISHSFQMDPPFCSEALNSAISHTGRTY 450
V +L TV E ++ G KE+QK+G A Q+++ F LN AI+ G+TY
Sbjct: 412 GVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVFSSSGYQGETDLNDAITEAGKTY 471
Query: 451 EAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFPDIIHLQKGAFAKVKESQRMSDEGRMVQ 510
E I + AEQPK DL +++ Y+G L FPDII KGA KVKES ++ ++
Sbjct: 472 EEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGTHKGAIEKVKESDKLVATSKITL 531
Query: 511 DEADGIRRRCRVVGFALQAEMNHFHQRRELDFKHMMQNYLRQQILFYQRVGQQLEKTLRM 570
+ + +R ++ +ALQAEMNHFH R D+ +++ YL QQ+ FY+ + ++L + L
Sbjct: 532 QDKQNMVKRVSIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSR 591
Query: 571 Y 571
+
Sbjct: 592 F 592
>gi|153791707 sorting nexin family member 30 [Homo sapiens]
Length = 437
Score = 71.6 bits (174), Expect = 2e-12
Identities = 75/347 (21%), Positives = 145/347 (41%), Gaps = 44/347 (12%)
Query: 234 VEDPTKQTKFKGIKSYISYKLTPTHAASP-------VYRRYKHFDWLYNRLLHKFTVISV 286
V+DP K +++YI+Y++T V RRY+ FDWL ++L +
Sbjct: 95 VDDPKKHVCT--METYITYRITTKSTRVEFDLPEYSVRRRYQDFDWLRSKLEESQPTHLI 152
Query: 287 PHLPEK----QATGRFEEDFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFLSCLDDKQWK 342
P LPEK RF E+F+E R++ L ++ +T HPVLS E F FL+ D +K
Sbjct: 153 PPLPEKFVVKGVVDRFSEEFVETRRKALDKFLKRITDHPVLSFNEHFNIFLTAKDLNAYK 212
Query: 343 -----MGKRRAEKDEMVGASFLLTFQIPTEHQDLQDVEDRVDTFKAFSKKMDDSVLQLST 397
+ R E + V +++ T + + D +DTF L+L T
Sbjct: 213 KQGIALLTRMGESVKHVTGG----YKLRTRPLEFAAIGDYLDTF----------ALKLGT 258
Query: 398 ---VASELVRKHVGGF--RKEFQKLGSAFQAISHSFQMDPPFCSEALNSAISHTGRTYEA 452
+A ++++ + +E+ + S + A+ +E L + G A
Sbjct: 259 IDRIAQRIIKEEIEYLVELREYGPVYSTWSALEGEL-------AEPLEGVSACIGNCSTA 311
Query: 453 IGEMFAEQPKNDLFQMLDTLSLYQGLLSNFPDIIHLQKGAFAKVKESQRMSDEGRMVQDE 512
+ E+ + ++ L + + + + S +Q AK++ ++ V +
Sbjct: 312 LEELTDDMTEDFLPVLREYILYSDSMKSVLKKRDQVQAEYEAKLEAVALRKEDRPKVPAD 371
Query: 513 ADGIRRRCRVVGFALQAEMNHFHQRRELDFKHMMQNYLRQQILFYQR 559
+ + R L+A+M + + DF+ ++ + I +Y++
Sbjct: 372 VEKCQDRMECFNADLKADMERWQNNKRQDFRQLLMGMADKNIQYYEK 418
>gi|23943858 sorting nexin 8 [Homo sapiens]
Length = 465
Score = 64.3 bits (155), Expect = 3e-10
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 17/257 (6%)
Query: 249 YISYKLTPTHAASPVYRRYKHFDWLYNRLLHKFTVISVPHLPEKQATGRFEEDFIEKRKR 308
++ Y+++ S VYRRY F LLHKF VP LP K+ G + +FIE R+R
Sbjct: 92 HVEYEVSSQRFKSSVYRRYNDFVVFQEMLLHKFPYRMVPALPPKRMLGA-DREFIEARRR 150
Query: 309 RLILWMDHMTSHPVLSQYEGFQHFLSCL-DDKQWKMGKRRAEKDEMVGASFLLTFQIPTE 367
L +++ + HP+ S+ + FLS D Q K+ E + VG F L ++ T
Sbjct: 151 ALKRFVNLVARHPLFSEDVVLKLFLSFSGSDVQNKL----KESAQCVGDEF-LNCKLATR 205
Query: 368 HQDL--QDVEDRVDTFKAFSKKMDDSVLQLSTVASELVRKHVGG------FRKEFQKLGS 419
+D D++ + + + + +S +L A + + + F KE +GS
Sbjct: 206 AKDFLPADIQAQFAISRELIRNIYNSFHKLRDRAERIASRAIDNAADLLIFGKELSAIGS 265
Query: 420 AFQAISHSFQMDPPFCSEALNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLL 479
+ ++ +L A+ + + + A+Q K + +++ L+L+ LL
Sbjct: 266 DTTPLPSWAALNSSTWG-SLKQALKGLSVEFALLADKAAQQGKQEENDVVEKLNLFLDLL 324
Query: 480 SNFPDIIHL-QKGAFAK 495
++ D+ +KG K
Sbjct: 325 QSYKDLCERHEKGVLHK 341
>gi|23111036 sorting nexin 1 isoform c [Homo sapiens]
Length = 474
Score = 57.0 bits (136), Expect = 5e-08
Identities = 104/493 (21%), Positives = 184/493 (37%), Gaps = 97/493 (19%)
Query: 122 DGCTVVEEPRAGGLGTNGHPPLNLSYPGAYPSQHMAFRPKPPLERQDSLASAKRGSVVGR 181
+G EP AG T G ++ A S+H + + L ++ S + G +
Sbjct: 26 EGAAGGSEPEAGDSDTEGE---DIFTGAAVVSKHQSPKITTSLLPINN-GSKENGIHEEQ 81
Query: 182 NLNRFSCFVRSGVEAFILGDVPMMAKIAETYSIEMGPRGPQWKANPHPFACSVEDPTKQT 241
+ F + VE + K+ I + P+ + P P +E+ ++
Sbjct: 82 DQEPQDLFADATVELSLDSTQNNQKKVLAKTLISLPPQEATNSSKPQPTYEELEEEEQED 141
Query: 242 KFK-------------GIKSYISYKLTPTHAASPVYR--------RYKHFDWLYNRLLHK 280
+F G+ +Y++YK+T T + P++R R+ F LY +L K
Sbjct: 142 QFDLTVGITDPEKIGDGMNAYVAYKVT-TQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEK 200
Query: 281 FTV--ISVPHLPEKQATGRFE----------EDFIEKRKRRLILWMDHMTSHPVLSQYEG 328
+ VP PEK G + +F+EKR+ L ++ + +HP + Q
Sbjct: 201 HSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPD 260
Query: 329 FQHFLSCLDDKQWKMGKRRAEKDEMVGASFLLTFQIPTEHQDLQDVE-DRVDTFKAFSKK 387
+ FL + + R + GA L F T+ ++ + D + F +K
Sbjct: 261 VREFL------EKEELPRAVGTQTLSGAGLLKMFNKATDAVSKMTIKMNESDIW--FEEK 312
Query: 388 M------DDSVLQLSTVASELVRK------HVGGFRKEFQKLGSAFQAISHSFQMDPPFC 435
+ + + +L V LV + F K LGS+
Sbjct: 313 LQEVECEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSED------------- 359
Query: 436 SEALNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFPDIIHLQKGAFAK 495
+ AL+ A+S E I ++ EQ ND F + + LS Y LL+ I+
Sbjct: 360 NTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLA----IVRW------- 408
Query: 496 VKESQRMSDEGRMVQDEADGIRRRCRVVGFALQAEMNHFHQRRELDFKHMMQNYLRQQIL 555
E R+ Q E D R + ++ E+ F + + DFK+ + YL +
Sbjct: 409 ---------ESRVTQYERDFER-----ISTVVRKEVIRFEKEKSKDFKNHVIKYLETLLY 454
Query: 556 FYQRVGQQLEKTL 568
Q++ + E L
Sbjct: 455 SQQQLAKYWEAFL 467
>gi|19224660 protein kinase C and casein kinase substrate in neurons
3 [Homo sapiens]
Length = 424
Score = 55.1 bits (131), Expect = 2e-07
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 6 RALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEIV 59
RALYD+ + +E+S + E+L+ SE GW QGQ G GL+PA+YVE V
Sbjct: 369 RALYDYAGQEADELSFRAGEELLKMSEEDEQGWCQGQLQSGRIGLYPANYVECV 422
>gi|23111034 sorting nexin 1 isoform a [Homo sapiens]
Length = 522
Score = 53.9 bits (128), Expect = 4e-07
Identities = 106/516 (20%), Positives = 190/516 (36%), Gaps = 95/516 (18%)
Query: 122 DGCTVVEEPRAGGLGTNGHPPLNLSYPGAYPSQHMAFRPKPPLERQDSLASAKRGSVVGR 181
+G EP AG T G ++ A S+H + + L ++ S + G +
Sbjct: 26 EGAAGGSEPEAGDSDTEGE---DIFTGAAVVSKHQSPKITTSLLPINN-GSKENGIHEEQ 81
Query: 182 NLNRFSCFVRSGVEAFILGDVPMMAKIAETYSIEMGPRGPQWKANPHPFACSVEDPTKQT 241
+ F + VE + K+ I + P+ + P P +E+ ++
Sbjct: 82 DQEPQDLFADATVELSLDSTQNNQKKVLAKTLISLPPQEATNSSKPQPTYEELEEEEQED 141
Query: 242 KFK-------------GIKSYISYKLTPTHAASPVYR--------RYKHFDWLYNRLLHK 280
+F G+ +Y++YK+T T + P++R R+ F LY +L K
Sbjct: 142 QFDLTVGITDPEKIGDGMNAYVAYKVT-TQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEK 200
Query: 281 FTV--ISVPHLPEKQATGRFE----------EDFIEKRKRRLILWMDHMTSHPVLSQYEG 328
+ VP PEK G + +F+EKR+ L ++ + +HP + Q
Sbjct: 201 HSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPD 260
Query: 329 FQHFLSCLDDKQWKMGKRRAEKDEMVGASFLLTFQIPTEHQDLQDVE-DRVDTFKAFSKK 387
+ FL + + R + GA L F T+ ++ + D + F +K
Sbjct: 261 VREFL------EKEELPRAVGTQTLSGAGLLKMFNKATDAVSKMTIKMNESDIW--FEEK 312
Query: 388 M------DDSVLQLSTVASELVRK------HVGGFRKEFQKLGSAFQAISHSFQMDPPFC 435
+ + + +L V LV + F K LGS+
Sbjct: 313 LQEVECEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSED------------- 359
Query: 436 SEALNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLLS--------------N 481
+ AL+ A+S E I ++ EQ ND F + + LS Y LL+
Sbjct: 360 NTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQR 419
Query: 482 FPDI-IHLQKGAFAKVK--------ESQRMSDEGRMVQDEADGIRRRCRVVGFALQAEMN 532
+ D LQK A+ + + Q+ DE + R + ++ E+
Sbjct: 420 WQDAQATLQKKREAEARLLWANKPDKLQQAKDEILEWESRVTQYERDFERISTVVRKEVI 479
Query: 533 HFHQRRELDFKHMMQNYLRQQILFYQRVGQQLEKTL 568
F + + DFK+ + YL + Q++ + E L
Sbjct: 480 RFEKEKSKDFKNHVIKYLETLLYSQQQLAKYWEAFL 515
>gi|23111055 sorting nexin 7 isoform b [Homo sapiens]
Length = 336
Score = 53.9 bits (128), Expect = 4e-07
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 16/128 (12%)
Query: 233 SVEDPTKQTKFKGIKSYISYKL-TPTHAAS------PVYRRYKHFDWLYNRLLHKFTVIS 285
+V++P ++ I+++I+Y++ T T V RRY+ F WL +L +
Sbjct: 35 TVDEP--ESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLI 92
Query: 286 VPHLPEK----QATGRFEEDFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFLSCLDDKQW 341
+P LPEK RF +DFIE R++ L +++ + HP L+ E F+ FL+ + W
Sbjct: 93 IPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTA---QAW 149
Query: 342 KMGKRRAE 349
++ + +
Sbjct: 150 ELSSHKKQ 157
>gi|194294540 sorting nexin 7 isoform a [Homo sapiens]
Length = 451
Score = 53.9 bits (128), Expect = 4e-07
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 16/128 (12%)
Query: 233 SVEDPTKQTKFKGIKSYISYKL-TPTHAAS------PVYRRYKHFDWLYNRLLHKFTVIS 285
+V++P ++ I+++I+Y++ T T V RRY+ F WL +L +
Sbjct: 99 TVDEP--ESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLI 156
Query: 286 VPHLPEK----QATGRFEEDFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFLSCLDDKQW 341
+P LPEK RF +DFIE R++ L +++ + HP L+ E F+ FL+ + W
Sbjct: 157 IPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTA---QAW 213
Query: 342 KMGKRRAE 349
++ + +
Sbjct: 214 ELSSHKKQ 221
>gi|23111038 sorting nexin 2 [Homo sapiens]
Length = 519
Score = 53.5 bits (127), Expect = 5e-07
Identities = 81/381 (21%), Positives = 142/381 (37%), Gaps = 76/381 (19%)
Query: 234 VEDPTKQTKFKGIKSYISYKLTPTHAAS-------PVYRRYKHFDWLYNRLLHKFTVIS- 285
V DP K G+ +Y++Y++T + S V RR+ F L+++L K+ +
Sbjct: 146 VSDPEKVGD--GMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGY 203
Query: 286 -VPHLPEKQATGRFE----------EDFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFLS 334
VP PEK G + +F+EKR+ L ++ HP L Q + FL
Sbjct: 204 IVPPAPEKSIVGMTKVKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLE 263
Query: 335 CLDDKQWKMGKRRAEKDEMVGASFLLTFQIPTEHQDLQDVEDRVDTFKAFSKKMDDS--- 391
+ R + GA L+ V D + KM++S
Sbjct: 264 SSE------LPRAVNTQALSGAGI------------LRMVNKAADAVNKMTIKMNESDAW 305
Query: 392 ----VLQLSTVASELVRKHVG-----GFRKEFQKLGSAFQAISHSFQMDPPFCSEALNSA 442
Q + +L + HV RKE +AF + + AL+ A
Sbjct: 306 FEEKQQQFENLDQQLRKLHVSVEALVCHRKELSANTAAF--AKSAAMLGNSEDHTALSRA 363
Query: 443 ISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFPDIIHLQKGAFAKVKESQ-- 500
+S E I ++ EQ D + + LS Y L++ + + + K +++Q
Sbjct: 364 LSQLAEVEEKIDQLHQEQAFADFYMFSELLSDYIRLIAAVKGVFDHRMKCWQKWEDAQIT 423
Query: 501 ----RMSDEGRMVQDEADGIR-----------------RRCRVVGFALQAEMNHFHQRRE 539
R ++ MV ++ D I+ R + ++ E+ F + R
Sbjct: 424 LLKKREAEAKMMVANKPDKIQQAKNEIREWEAKVQQGERDFEQISKTIRKEVGRFEKERV 483
Query: 540 LDFKHMMQNYLRQQILFYQRV 560
DFK ++ YL + Q++
Sbjct: 484 KDFKTVIIKYLESLVQTQQQL 504
>gi|23111032 sorting nexin 1 isoform b [Homo sapiens]
Length = 457
Score = 52.8 bits (125), Expect = 9e-07
Identities = 83/380 (21%), Positives = 145/380 (38%), Gaps = 78/380 (20%)
Query: 245 GIKSYISYKLTPTHAASPVYR--------RYKHFDWLYNRLLHKFTV--ISVPHLPEKQA 294
G+ +Y++YK+T T + P++R R+ F LY +L K + VP PEK
Sbjct: 93 GMNAYVAYKVT-TQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSL 151
Query: 295 TGRFE----------EDFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFLSCLDDKQWKMG 344
G + +F+EKR+ L ++ + +HP + Q + FL + +
Sbjct: 152 IGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFL------EKEEL 205
Query: 345 KRRAEKDEMVGASFLLTFQIPTEHQDLQDVE-DRVDTFKAFSKKM------DDSVLQLST 397
R + GA L F T+ ++ + D + F +K+ + + +L
Sbjct: 206 PRAVGTQTLSGAGLLKMFNKATDAVSKMTIKMNESDIW--FEEKLQEVECEEQRLRKLHA 263
Query: 398 VASELVRK------HVGGFRKEFQKLGSAFQAISHSFQMDPPFCSEALNSAISHTGRTYE 451
V LV + F K LGS+ + AL+ A+S E
Sbjct: 264 VVETLVNHRKELALNTAQFAKSLAMLGSSED-------------NTALSRALSQLAEVEE 310
Query: 452 AIGEMFAEQPKNDLFQMLDTLSLYQGLLS--------------NFPDI-IHLQKGAFAKV 496
I ++ EQ ND F + + LS Y LL+ + D LQK A+
Sbjct: 311 KIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEA 370
Query: 497 K--------ESQRMSDEGRMVQDEADGIRRRCRVVGFALQAEMNHFHQRRELDFKHMMQN 548
+ + Q+ DE + R + ++ E+ F + + DFK+ +
Sbjct: 371 RLLWANKPDKLQQAKDEILEWESRVTQYERDFERISTVVRKEVIRFEKEKSKDFKNHVIK 430
Query: 549 YLRQQILFYQRVGQQLEKTL 568
YL + Q++ + E L
Sbjct: 431 YLETLLYSQQQLAKYWEAFL 450
>gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1363
Score = 50.4 bits (119), Expect = 4e-06
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 450 YEAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFPDIIHLQKGAFAKVKESQRMSDEGR 507
+ +GE+ A QP +L ++D L L QG N PDIIH+ K A KV ES++ EG+
Sbjct: 1285 FNTVGELXANQPIQELDPVMDLLVLSQGHQVNIPDIIHIHKEALTKVMESRQHVAEGK 1342
>gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1366
Score = 50.4 bits (119), Expect = 4e-06
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 450 YEAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFPDIIHLQKGAFAKVKESQRMSDEGR 507
+ +GE+ A QP +L ++D L L QG N PDIIH+ K A KV ES++ EG+
Sbjct: 1288 FNTVGELXANQPIQELDPVMDLLVLSQGHQVNIPDIIHIHKEALTKVMESRQHVAEGK 1345
>gi|24308229 protein kinase C and casein kinase substrate in neurons
1 [Homo sapiens]
Length = 444
Score = 50.4 bits (119), Expect = 4e-06
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 6 RALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEIV 59
RALYD+ + ++E+S + ++L E GW +G+ G+ GL+PA+YVE +
Sbjct: 391 RALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEAI 444
>gi|148747351 protein kinase C and casein kinase substrate in
neurons 2 [Homo sapiens]
Length = 486
Score = 50.1 bits (118), Expect = 6e-06
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 6 RALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEIVR 60
RALYD+ + +E+S + ++L + GW +G+ G+ GL+PA+YVE ++
Sbjct: 432 RALYDYEGQEHDELSFKAGDELTKMEDEDEQGWCKGRLDNGQVGLYPANYVEAIQ 486
>gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]
Length = 1220
Score = 48.9 bits (115), Expect = 1e-05
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
Query: 6 RALYDFHSENKEEISIQQDEDLVI------FSETSLDGWLQGQNSRGETGLFPASYVEIV 59
RALY F S + +EI+IQ + +++ S+T GWL G+ +G+TG FPA+Y E +
Sbjct: 746 RALYPFESRSHDEITIQPGDIVMVKGEWVDESQTGEPGWLGGE-LKGKTGWFPANYAEKI 804
Query: 60 RSGISTNHADYSSSPAGSPGAQVSLYNSPSVASPARSGGGSGFLSNQGSF---------E 110
+ +P +++L +P+ + S S +N F E
Sbjct: 805 PENEVPAPVKPVTDSTSAPAPKLALRETPAPLA-VTSSEPSTTPNNWADFSSTWPTSTNE 863
Query: 111 EDDDDDWDDW 120
+ + D+WD W
Sbjct: 864 KPETDNWDAW 873
Score = 35.4 bits (80), Expect = 0.14
Identities = 14/51 (27%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 8 LYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEI 58
+YD+ ++N +E++ + + + + ++ D W N G+ GLFP++YV++
Sbjct: 1163 MYDYTAQNDDELAFNKGQIINVLNKEDPDWWKGEVN--GQVGLFPSNYVKL 1211
Score = 35.0 bits (79), Expect = 0.19
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 3 LKGRALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEIVRSG 62
L+ +ALY + ++ ++ +++ + + + D W G+ +G+ G FP SYV+++
Sbjct: 916 LQAQALYPWRAKKDNHLNFNKNDVITVLEQQ--DMWWFGE-VQGQKGWFPKSYVKLISGP 972
Query: 63 ISTNHADYSSSPAGSPGAQVSLYNSPSVASPARSGGGSG 101
I + +S +GS + SL VASPA SG
Sbjct: 973 IRKS----TSMDSGSSESPASL---KRVASPAAKPVVSG 1004
>gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]
Length = 1721
Score = 48.9 bits (115), Expect = 1e-05
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
Query: 6 RALYDFHSENKEEISIQQDEDLVI------FSETSLDGWLQGQNSRGETGLFPASYVEIV 59
RALY F S + +EI+IQ + +++ S+T GWL G+ +G+TG FPA+Y E +
Sbjct: 746 RALYPFESRSHDEITIQPGDIVMVKGEWVDESQTGEPGWLGGE-LKGKTGWFPANYAEKI 804
Query: 60 RSGISTNHADYSSSPAGSPGAQVSLYNSPSVASPARSGGGSGFLSNQGSF---------E 110
+ +P +++L +P+ + S S +N F E
Sbjct: 805 PENEVPAPVKPVTDSTSAPAPKLALRETPAPLA-VTSSEPSTTPNNWADFSSTWPTSTNE 863
Query: 111 EDDDDDWDDW 120
+ + D+WD W
Sbjct: 864 KPETDNWDAW 873
Score = 35.4 bits (80), Expect = 0.14
Identities = 14/51 (27%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 8 LYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEI 58
+YD+ ++N +E++ + + + + ++ D W N G+ GLFP++YV++
Sbjct: 1163 MYDYTAQNDDELAFNKGQIINVLNKEDPDWWKGEVN--GQVGLFPSNYVKL 1211
Score = 35.0 bits (79), Expect = 0.19
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 3 LKGRALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEIVRSG 62
L+ +ALY + ++ ++ +++ + + + D W G+ +G+ G FP SYV+++
Sbjct: 916 LQAQALYPWRAKKDNHLNFNKNDVITVLEQQ--DMWWFGE-VQGQKGWFPKSYVKLISGP 972
Query: 63 ISTNHADYSSSPAGSPGAQVSLYNSPSVASPARSGGGSG 101
I + +S +GS + SL VASPA SG
Sbjct: 973 IRKS----TSMDSGSSESPASL---KRVASPAAKPVVSG 1004
>gi|4885153 v-crk sarcoma virus CT10 oncogene homolog (avian)-like
[Homo sapiens]
Length = 303
Score = 48.5 bits (114), Expect = 2e-05
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 6 RALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVE-IVRSGIS 64
R LYDF + E++ ++ E LVI + + W +N G G+ P YVE +VRS
Sbjct: 129 RTLYDFPGNDAEDLPFKKGEILVIIEKPE-EQWWSARNKDGRVGMIPVPYVEKLVRSSPH 187
Query: 65 TNHADYSSSPAGSPGAQVSLYNSPSVASPARSGGGS 100
H + +S+ G P Y P +P + GS
Sbjct: 188 GKHGNRNSNSYGIP-EPAHAYAQPQTTTPLPAVSGS 222
>gi|5453710 LIM and SH3 protein 1 [Homo sapiens]
Length = 261
Score = 46.6 bits (109), Expect = 6e-05
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 6 RALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSR-GETGLFPASYVEIV 59
RA+YD+ + +++E+S QD D ++ + DGW+ G R G+TG+ PA+YVE +
Sbjct: 208 RAVYDYSAADEDEVSF-QDGDTIVNVQQIDDGWMYGTVERTGDTGMLPANYVEAI 261
>gi|5453758 nebulette sarcomeric isoform [Homo sapiens]
Length = 1014
Score = 46.2 bits (108), Expect = 8e-05
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 6 RALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSR-GETGLFPASYVEIV 59
RA+YD+ +++++E+S +D D ++ + DGW+ G R G TG+ PA+Y+E V
Sbjct: 960 RAMYDYSAQDEDEVSF-RDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFV 1013
>gi|47087157 nebulette non-muscle isoform [Homo sapiens]
Length = 270
Score = 46.2 bits (108), Expect = 8e-05
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 6 RALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSR-GETGLFPASYVEIV 59
RA+YD+ +++++E+S +D D ++ + DGW+ G R G TG+ PA+Y+E V
Sbjct: 216 RAMYDYSAQDEDEVSF-RDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFV 269
>gi|38524622 formin binding protein 1 [Homo sapiens]
Length = 617
Score = 45.4 bits (106), Expect = 1e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 6 RALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEI 58
+ALY F +N+ IS+ + E L + E DGW + + + E G P SYVE+
Sbjct: 556 KALYTFEGQNEGTISVVEGETLYVIEEDKGDGWTRIRRNEDEEGYVPTSYVEV 608
>gi|171906575 drebrin-like isoform c [Homo sapiens]
Length = 439
Score = 45.4 bits (106), Expect = 1e-04
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 3 LKGRALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEIV 59
L RALYD+ + + EIS E+L+ E +GW +G G G+FPA+YVE++
Sbjct: 383 LCARALYDYQAADDTEISFDP-ENLITGIEVIDEGWWRGYGPDGHFGMFPANYVELI 438
>gi|62198235 drebrin-like isoform b [Homo sapiens]
Length = 430
Score = 45.4 bits (106), Expect = 1e-04
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 3 LKGRALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEIV 59
L RALYD+ + + EIS E+L+ E +GW +G G G+FPA+YVE++
Sbjct: 374 LCARALYDYQAADDTEISFDP-ENLITGIEVIDEGWWRGYGPDGHFGMFPANYVELI 429
>gi|21361670 drebrin-like isoform a [Homo sapiens]
Length = 431
Score = 45.4 bits (106), Expect = 1e-04
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 3 LKGRALYDFHSENKEEISIQQDEDLVIFSETSLDGWLQGQNSRGETGLFPASYVEIV 59
L RALYD+ + + EIS E+L+ E +GW +G G G+FPA+YVE++
Sbjct: 375 LCARALYDYQAADDTEISFDP-ENLITGIEVIDEGWWRGYGPDGHFGMFPANYVELI 430
>gi|23111026 sorting nexin 11 [Homo sapiens]
Length = 270
Score = 45.4 bits (106), Expect = 1e-04
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 234 VEDPTKQTKFKGIKSYISYKL-------TPTHAASPVYRRYKHFDWLYNRLLHKFTVISV 286
V+DP Q + SY+ YK+ T S V RRY+ F WL +L ++ V
Sbjct: 21 VQDPRVQNEGSW-NSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPV 79
Query: 287 PHLPEKQATGRFEEDFIEKRKRRLILWMDHMTSHPVL 323
P LP K ++FIEKR++ L +++ + VL
Sbjct: 80 PELPGKSTFFGTSDEFIEKRRQGLQHFLEKVLQSVVL 116
>gi|23111028 sorting nexin 11 [Homo sapiens]
Length = 270
Score = 45.4 bits (106), Expect = 1e-04
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 234 VEDPTKQTKFKGIKSYISYKL-------TPTHAASPVYRRYKHFDWLYNRLLHKFTVISV 286
V+DP Q + SY+ YK+ T S V RRY+ F WL +L ++ V
Sbjct: 21 VQDPRVQNEGSW-NSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPV 79
Query: 287 PHLPEKQATGRFEEDFIEKRKRRLILWMDHMTSHPVL 323
P LP K ++FIEKR++ L +++ + VL
Sbjct: 80 PELPGKSTFFGTSDEFIEKRRQGLQHFLEKVLQSVVL 116
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,408,074
Number of Sequences: 37866
Number of extensions: 1149153
Number of successful extensions: 4493
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 160
Number of HSP's that attempted gapping in prelim test: 4157
Number of HSP's gapped (non-prelim): 394
length of query: 574
length of database: 18,247,518
effective HSP length: 108
effective length of query: 466
effective length of database: 14,157,990
effective search space: 6597623340
effective search space used: 6597623340
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.