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Search of human proteins with 231573214
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|231573214 zinc finger protein 294 [Homo sapiens]
(1812 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|231573214 zinc finger protein 294 [Homo sapiens] 3612 0.0
gi|13569903 ring finger protein 32 [Homo sapiens] 40 0.016
gi|94721324 non-SMC element 1 homolog [Homo sapiens] 37 0.13
gi|53729334 membrane-associated ring finger (C3HC4) 2 isoform 2 ... 36 0.30
gi|53729332 membrane-associated ring finger (C3HC4) 2 isoform 1 ... 36 0.30
gi|53729330 membrane-associated ring finger (C3HC4) 2 isoform 1 ... 36 0.30
gi|5902122 spectrin, beta, non-erythrocytic 2 [Homo sapiens] 36 0.39
gi|37675277 ring finger protein 148 [Homo sapiens] 36 0.39
gi|7662486 ring finger protein 44 [Homo sapiens] 35 0.51
gi|40807469 TRAF interacting protein [Homo sapiens] 35 0.66
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 35 0.87
gi|39995084 integrator complex subunit 3 [Homo sapiens] 34 1.1
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 33 1.9
gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens] 33 1.9
gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens] 33 1.9
gi|5032285 dystrophin Dp427l isoform [Homo sapiens] 33 1.9
gi|5032283 dystrophin Dp427m isoform [Homo sapiens] 33 1.9
gi|21040269 ring finger protein 133 [Homo sapiens] 33 1.9
gi|19923981 IQ motif containing D [Homo sapiens] 33 1.9
gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo ... 33 2.5
gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo ... 33 2.5
gi|40805104 topoisomerase I binding, arginine/serine-rich [Homo ... 33 2.5
gi|7706039 ring finger protein 181 [Homo sapiens] 33 2.5
gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens] 33 2.5
gi|157785668 coiled-coil domain containing 39 [Homo sapiens] 33 2.5
gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens] 33 2.5
gi|22212927 nuclear transcription factor, X-box binding 1 isofor... 33 3.3
gi|22212925 nuclear transcription factor, X-box binding 1 isofor... 33 3.3
gi|21361137 nuclear transcription factor, X-box binding 1 isofor... 33 3.3
gi|125628636 keratin 80 isoform a [Homo sapiens] 33 3.3
>gi|231573214 zinc finger protein 294 [Homo sapiens]
Length = 1812
Score = 3612 bits (9367), Expect = 0.0
Identities = 1812/1812 (100%), Positives = 1812/1812 (100%)
Query: 1 MDRVGGGKGPGGSYYRVSSSAARSRKLCPGRVNRGLSAQSTAATATMGGKNKQRTKGNLR 60
MDRVGGGKGPGGSYYRVSSSAARSRKLCPGRVNRGLSAQSTAATATMGGKNKQRTKGNLR
Sbjct: 1 MDRVGGGKGPGGSYYRVSSSAARSRKLCPGRVNRGLSAQSTAATATMGGKNKQRTKGNLR 60
Query: 61 PSNSGRAAELLAKEQGTVPGFIGFGTSQSDLGYVPAIQGAEEIDSLVDSDFRMVLRKLSK 120
PSNSGRAAELLAKEQGTVPGFIGFGTSQSDLGYVPAIQGAEEIDSLVDSDFRMVLRKLSK
Sbjct: 61 PSNSGRAAELLAKEQGTVPGFIGFGTSQSDLGYVPAIQGAEEIDSLVDSDFRMVLRKLSK 120
Query: 121 KDVTTKLKAMQEFGTMCTERDTETVKGVLPYWPRIFCKISLDHDRRVREATQQAFEKLIL 180
KDVTTKLKAMQEFGTMCTERDTETVKGVLPYWPRIFCKISLDHDRRVREATQQAFEKLIL
Sbjct: 121 KDVTTKLKAMQEFGTMCTERDTETVKGVLPYWPRIFCKISLDHDRRVREATQQAFEKLIL 180
Query: 181 KVKKQLAPYLKSLMGYWLMAQCDTYTPAAFAAKDAFEAAFPPSKQPEAIAFCKDEITSVL 240
KVKKQLAPYLKSLMGYWLMAQCDTYTPAAFAAKDAFEAAFPPSKQPEAIAFCKDEITSVL
Sbjct: 181 KVKKQLAPYLKSLMGYWLMAQCDTYTPAAFAAKDAFEAAFPPSKQPEAIAFCKDEITSVL 240
Query: 241 QDHLIKETPDTLSDPQTVPEEEREAKFYRVVTCSLLALKRLLCLLPDNELDSLEEKFKSL 300
QDHLIKETPDTLSDPQTVPEEEREAKFYRVVTCSLLALKRLLCLLPDNELDSLEEKFKSL
Sbjct: 241 QDHLIKETPDTLSDPQTVPEEEREAKFYRVVTCSLLALKRLLCLLPDNELDSLEEKFKSL 300
Query: 301 LSQNKFWKYGKHSVPQIRSAYFELVSALCQRIPQLMKEEASKVSPSVLLSIDDSDPIVCP 360
LSQNKFWKYGKHSVPQIRSAYFELVSALCQRIPQLMKEEASKVSPSVLLSIDDSDPIVCP
Sbjct: 301 LSQNKFWKYGKHSVPQIRSAYFELVSALCQRIPQLMKEEASKVSPSVLLSIDDSDPIVCP 360
Query: 361 ALWEAVLYTLTTIEDCWLHVNAKKSVFPKLSTVIREGGRGLATVIYPYLLPFISKLPQSI 420
ALWEAVLYTLTTIEDCWLHVNAKKSVFPKLSTVIREGGRGLATVIYPYLLPFISKLPQSI
Sbjct: 361 ALWEAVLYTLTTIEDCWLHVNAKKSVFPKLSTVIREGGRGLATVIYPYLLPFISKLPQSI 420
Query: 421 TNPKLDFFKNFLTSLVAGLSTERTKTSSLESSAVISAFFECLRFIMQQNLGEEEIEQMLV 480
TNPKLDFFKNFLTSLVAGLSTERTKTSSLESSAVISAFFECLRFIMQQNLGEEEIEQMLV
Sbjct: 421 TNPKLDFFKNFLTSLVAGLSTERTKTSSLESSAVISAFFECLRFIMQQNLGEEEIEQMLV 480
Query: 481 NDQLIPFIDAVLKDPGLQHGQLFNHLAETLSSWEAKADTEKDEKTAHNLENVLIHFWERL 540
NDQLIPFIDAVLKDPGLQHGQLFNHLAETLSSWEAKADTEKDEKTAHNLENVLIHFWERL
Sbjct: 481 NDQLIPFIDAVLKDPGLQHGQLFNHLAETLSSWEAKADTEKDEKTAHNLENVLIHFWERL 540
Query: 541 SEICVAKISEPEADVESVLGVSNLLQVLQKPKSSLKSSKKKNGKVRFADEILESNKENEK 600
SEICVAKISEPEADVESVLGVSNLLQVLQKPKSSLKSSKKKNGKVRFADEILESNKENEK
Sbjct: 541 SEICVAKISEPEADVESVLGVSNLLQVLQKPKSSLKSSKKKNGKVRFADEILESNKENEK 600
Query: 601 CVSSEGEKIEGWELTTEPSLTHNSSGLLSPLRKKPLEDLVCKLADISINYVNERKSEQHL 660
CVSSEGEKIEGWELTTEPSLTHNSSGLLSPLRKKPLEDLVCKLADISINYVNERKSEQHL
Sbjct: 601 CVSSEGEKIEGWELTTEPSLTHNSSGLLSPLRKKPLEDLVCKLADISINYVNERKSEQHL 660
Query: 661 RFLSTLLDSFSSSRVFKMLLGDEKQSIVQAKPLEIAKLVQKNPAVQFLYQKLIGWLNEDQ 720
RFLSTLLDSFSSSRVFKMLLGDEKQSIVQAKPLEIAKLVQKNPAVQFLYQKLIGWLNEDQ
Sbjct: 661 RFLSTLLDSFSSSRVFKMLLGDEKQSIVQAKPLEIAKLVQKNPAVQFLYQKLIGWLNEDQ 720
Query: 721 RKDFGFLVDILYSALRCCDNDMERKKVLDDLTKVDLKWNSLLKIIEKACPSSDKHALVTP 780
RKDFGFLVDILYSALRCCDNDMERKKVLDDLTKVDLKWNSLLKIIEKACPSSDKHALVTP
Sbjct: 721 RKDFGFLVDILYSALRCCDNDMERKKVLDDLTKVDLKWNSLLKIIEKACPSSDKHALVTP 780
Query: 781 WLKGDILGEKLVNLADCLCNEDLESRVSSESHFSERWTLLSLVLSQHVKNDYLIGDVYVE 840
WLKGDILGEKLVNLADCLCNEDLESRVSSESHFSERWTLLSLVLSQHVKNDYLIGDVYVE
Sbjct: 781 WLKGDILGEKLVNLADCLCNEDLESRVSSESHFSERWTLLSLVLSQHVKNDYLIGDVYVE 840
Query: 841 RIIVRLHETLFKTKKLSEAESSDSSVSFICDVAYNYFSSAKGCLLMPSSEDLLLTLFQLC 900
RIIVRLHETLFKTKKLSEAESSDSSVSFICDVAYNYFSSAKGCLLMPSSEDLLLTLFQLC
Sbjct: 841 RIIVRLHETLFKTKKLSEAESSDSSVSFICDVAYNYFSSAKGCLLMPSSEDLLLTLFQLC 900
Query: 901 AQSKEKTHLPDFLICKLKNTWLSGVNLLVHQTDSSYKESTFLHLSALWLKNQVQASSLDI 960
AQSKEKTHLPDFLICKLKNTWLSGVNLLVHQTDSSYKESTFLHLSALWLKNQVQASSLDI
Sbjct: 901 AQSKEKTHLPDFLICKLKNTWLSGVNLLVHQTDSSYKESTFLHLSALWLKNQVQASSLDI 960
Query: 961 NSLQVLLSAVDDLLNTLLESEDSYLMGVYIGSVMPNDSEWEKMRQSLPMQWLHRPLLEGR 1020
NSLQVLLSAVDDLLNTLLESEDSYLMGVYIGSVMPNDSEWEKMRQSLPMQWLHRPLLEGR
Sbjct: 961 NSLQVLLSAVDDLLNTLLESEDSYLMGVYIGSVMPNDSEWEKMRQSLPMQWLHRPLLEGR 1020
Query: 1021 LSLNYECFKTDFKEQDIKTLPSHLCTSALLSKMVLIALRKETVLENNELEKIIAELLYSL 1080
LSLNYECFKTDFKEQDIKTLPSHLCTSALLSKMVLIALRKETVLENNELEKIIAELLYSL
Sbjct: 1021 LSLNYECFKTDFKEQDIKTLPSHLCTSALLSKMVLIALRKETVLENNELEKIIAELLYSL 1080
Query: 1081 QWCEELDNPPIFLIGFCEILQKMNITYDNLRVLGNTSGLLQLLFNRSREHGTLWSLIIAK 1140
QWCEELDNPPIFLIGFCEILQKMNITYDNLRVLGNTSGLLQLLFNRSREHGTLWSLIIAK
Sbjct: 1081 QWCEELDNPPIFLIGFCEILQKMNITYDNLRVLGNTSGLLQLLFNRSREHGTLWSLIIAK 1140
Query: 1141 LILSRSISSDEVKPHYKRKESFFPLTEGNLHTIQSLCPFLSKEEKKEFSAQCIPALLGWT 1200
LILSRSISSDEVKPHYKRKESFFPLTEGNLHTIQSLCPFLSKEEKKEFSAQCIPALLGWT
Sbjct: 1141 LILSRSISSDEVKPHYKRKESFFPLTEGNLHTIQSLCPFLSKEEKKEFSAQCIPALLGWT 1200
Query: 1201 KKDLCSTNGGFGHLAIFNSCLQTKSIDDGELLHGILKIIISWKKEHEDIFLFSCNLSEAS 1260
KKDLCSTNGGFGHLAIFNSCLQTKSIDDGELLHGILKIIISWKKEHEDIFLFSCNLSEAS
Sbjct: 1201 KKDLCSTNGGFGHLAIFNSCLQTKSIDDGELLHGILKIIISWKKEHEDIFLFSCNLSEAS 1260
Query: 1261 PEVLGVNIEIIRFLSLFLKYCSSPLAESEWDFIMCSMLAWLETTSENQALYSIPLVQLFA 1320
PEVLGVNIEIIRFLSLFLKYCSSPLAESEWDFIMCSMLAWLETTSENQALYSIPLVQLFA
Sbjct: 1261 PEVLGVNIEIIRFLSLFLKYCSSPLAESEWDFIMCSMLAWLETTSENQALYSIPLVQLFA 1320
Query: 1321 CVSCDLACDLSAFFDSTTLDTIGNLPVNLISEWKEFFSQGIHSLLLPILVTVTGENKDVS 1380
CVSCDLACDLSAFFDSTTLDTIGNLPVNLISEWKEFFSQGIHSLLLPILVTVTGENKDVS
Sbjct: 1321 CVSCDLACDLSAFFDSTTLDTIGNLPVNLISEWKEFFSQGIHSLLLPILVTVTGENKDVS 1380
Query: 1381 ETSFQNAMLKPMCETLTYISKEQLLSHKLPARLVADQKTNLPEYLQTLLNTLAPLLLFRA 1440
ETSFQNAMLKPMCETLTYISKEQLLSHKLPARLVADQKTNLPEYLQTLLNTLAPLLLFRA
Sbjct: 1381 ETSFQNAMLKPMCETLTYISKEQLLSHKLPARLVADQKTNLPEYLQTLLNTLAPLLLFRA 1440
Query: 1441 RPVQIAVYHMLYKLMPELPQYDQDNLKSYGDEEEEPALSPPAALMSLLSIQEDLLENVLG 1500
RPVQIAVYHMLYKLMPELPQYDQDNLKSYGDEEEEPALSPPAALMSLLSIQEDLLENVLG
Sbjct: 1441 RPVQIAVYHMLYKLMPELPQYDQDNLKSYGDEEEEPALSPPAALMSLLSIQEDLLENVLG 1500
Query: 1501 CIPVGQIVTIKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALYSMYLRKTKSLNKLLY 1560
CIPVGQIVTIKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALYSMYLRKTKSLNKLLY
Sbjct: 1501 CIPVGQIVTIKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALYSMYLRKTKSLNKLLY 1560
Query: 1561 HLFRLMPENPTYAETAVEVPNKDPKTFFTEELQLSIRETTMLPYHIPHLACSVYHMTLKD 1620
HLFRLMPENPTYAETAVEVPNKDPKTFFTEELQLSIRETTMLPYHIPHLACSVYHMTLKD
Sbjct: 1561 HLFRLMPENPTYAETAVEVPNKDPKTFFTEELQLSIRETTMLPYHIPHLACSVYHMTLKD 1620
Query: 1621 LPAMVRLWWNSSEKRVFNIVDRFTSKYVSSVLSFQEISSVQTSTQLFNGMTVKARATTRE 1680
LPAMVRLWWNSSEKRVFNIVDRFTSKYVSSVLSFQEISSVQTSTQLFNGMTVKARATTRE
Sbjct: 1621 LPAMVRLWWNSSEKRVFNIVDRFTSKYVSSVLSFQEISSVQTSTQLFNGMTVKARATTRE 1680
Query: 1681 VMATYTIEDIVIELIIQLPSNYPLGSIIVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSI 1740
VMATYTIEDIVIELIIQLPSNYPLGSIIVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSI
Sbjct: 1681 VMATYTIEDIVIELIIQLPSNYPLGSIIVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSI 1740
Query: 1741 MEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSN 1800
MEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSN
Sbjct: 1741 MEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSN 1800
Query: 1801 KSTCPLCRETFF 1812
KSTCPLCRETFF
Sbjct: 1801 KSTCPLCRETFF 1812
>gi|13569903 ring finger protein 32 [Homo sapiens]
Length = 362
Score = 40.4 bits (93), Expect = 0.016
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 1756 EGVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRE 1809
+ V+ C IC + L + +C FH ACL + +NK TCPLCR+
Sbjct: 122 DSVQPCPICKE-----EFELRPQVLLSCSHVFHKACLQAFEKFTNKKTCPLCRK 170
>gi|94721324 non-SMC element 1 homolog [Homo sapiens]
Length = 266
Score = 37.4 bits (85), Expect = 0.13
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 1756 EGVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRE 1809
+ V+ C IC S++ + ++C TC + H C+ K+F S+ + CP C +
Sbjct: 186 DAVKICNICHSLL------IQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCND 233
>gi|53729334 membrane-associated ring finger (C3HC4) 2 isoform 2 [Homo
sapiens]
Length = 176
Score = 36.2 bits (82), Expect = 0.30
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 1761 CMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETF 1811
C IC +G L C H +CL KW +SSN S C LC F
Sbjct: 64 CRICHEGANG-ECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 113
>gi|53729332 membrane-associated ring finger (C3HC4) 2 isoform 1 [Homo
sapiens]
Length = 246
Score = 36.2 bits (82), Expect = 0.30
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 1761 CMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETF 1811
C IC +G L C H +CL KW +SSN S C LC F
Sbjct: 64 CRICHEGANG-ECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 113
>gi|53729330 membrane-associated ring finger (C3HC4) 2 isoform 1 [Homo
sapiens]
Length = 246
Score = 36.2 bits (82), Expect = 0.30
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 1761 CMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETF 1811
C IC +G L C H +CL KW +SSN S C LC F
Sbjct: 64 CRICHEGANG-ECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 113
>gi|5902122 spectrin, beta, non-erythrocytic 2 [Homo sapiens]
Length = 2390
Score = 35.8 bits (81), Expect = 0.39
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 1055 LIALRKETVLENNELEKIIAELLYSLQWCEEL 1086
++A R+E +L N EL+K+ +LLY + W EE+
Sbjct: 519 MVAARRERLLLNLELQKVFQDLLYLMDWMEEM 550
>gi|37675277 ring finger protein 148 [Homo sapiens]
Length = 305
Score = 35.8 bits (81), Expect = 0.39
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 10/52 (19%)
Query: 1759 EDCMICFSVIHGFNYSLPKKACR--TCKKKFHSACLYKWFTSSNKSTCPLCR 1808
++C++CF P+ R TCK FH AC+ W + TCP+C+
Sbjct: 256 DNCVVCFDTYK------PQDVVRILTCKHFFHKACIDPWLLAHR--TCPMCK 299
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 35.4 bits (80), Expect = 0.51
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 1741 MEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRT--CKKKFHSACLYKWFTS 1798
+E L ++ N D C++CFS ++ R C +FH+ C+ KW +
Sbjct: 360 IEQLPSYRFNPDSHQSEQTLCVVCFSDFEA------RQLLRVLPCNHEFHTKCVDKWLKA 413
Query: 1799 SNKSTCPLCR 1808
+ TCP+CR
Sbjct: 414 NR--TCPICR 421
>gi|40807469 TRAF interacting protein [Homo sapiens]
Length = 469
Score = 35.0 bits (79), Expect = 0.66
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 1761 CMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCR 1808
C IC F++S A C FH CL +WF ++ TCP CR
Sbjct: 7 CTICSDF---FDHSRDVAAIH-CGHTFHLQCLIQWFETAPSRTCPQCR 50
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 34.7 bits (78), Expect = 0.87
Identities = 39/187 (20%), Positives = 76/187 (40%), Gaps = 24/187 (12%)
Query: 925 VNLLVHQTDSSYKESTFLHLSALWLKNQVQASSLDINSLQVLLSAVDDLLN--------- 975
V L + D ++ LH ++ Q+Q +NSLQ L+ V D LN
Sbjct: 1831 VRKLQQELDQLNRDKLSLHNDISAMQQQLQEKREAVNSLQEELANVQDHLNLAKQDLLHT 1890
Query: 976 -----TLLESEDSYLMGVYIGSVMPNDSEWEKMRQSLPMQWLHRPLLEGRLSLNYECFKT 1030
LL + + + D + E+ + +Q L + E +L L +
Sbjct: 1891 TKHQDVLLSEQTRLQKDISEWANRFEDCQKEEETKQQQLQVLQNEIEENKLKLVQQEMMF 1950
Query: 1031 DFKEQDIKTLPSHLCTSALLSKMVLIALRKETVLENNELEKIIAELLYSLQ--------- 1081
+++ ++ S L TS + K L KE + ++L+++++++L + +
Sbjct: 1951 QRLQKERESEESKLETSKVTLKEQQHQLEKELTDQKSKLDQVLSKVLAAEERVRTLQEEE 2010
Query: 1082 -WCEELD 1087
WCE L+
Sbjct: 2011 RWCESLE 2017
>gi|39995084 integrator complex subunit 3 [Homo sapiens]
Length = 1042
Score = 34.3 bits (77), Expect = 1.1
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 34/237 (14%)
Query: 778 VTPWLK--GDILGEKLVNL-------ADCLCNEDLESRVSSESHFSERWTLLSLVLSQHV 828
+TP+L + L +K++ L A C +++ +V E SE+ ++L+ L +
Sbjct: 567 ITPYLDQLDESLRDKVLQLQKGSDTEAQCEVMQEIVDQVLEEDFDSEQLSVLASCLQELF 626
Query: 829 KNDYLIGDVYVERIIVR-LHETLFKT-----KKLSEAESSDSSVSFICDVAYNYFSSAKG 882
K + G+V E I L E++ K + L + + +SS S + D+ +
Sbjct: 627 KAHFR-GEVLPEEITEESLEESVGKPLYLIFRNLCQMQEDNSSFSLLLDLLSELYQKQPK 685
Query: 883 C-------LLMPSSEDLLLTLFQLCAQSKEKTHLPDFLICKLKNTWLSGVNLLVHQTDSS 935
L + + L++ AQ+ + L L+ +K V LL H T S
Sbjct: 686 IGYHLLYYLRASKAAAGKMNLYESFAQATQLGDLHTCLMMDMKACQEDDVRLLCHLTPSI 745
Query: 936 YKESTFLHLSALWLKNQVQASSLDINSLQVLLSAV----------DDLLNTLLESED 982
Y E L + L N + A +D LQ L+ V D +LN L++S D
Sbjct: 746 YTEFPDETLRSGELLNMIVA-VIDSAQLQELVCHVMMGNLVMFRKDSVLNILIQSLD 801
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 33.5 bits (75), Expect = 1.9
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 710 QKLIGWLNEDQRKDFGFLVDILYSALRCCDNDMERKKVL-DDLTKVDLKWNSLLKIIEKA 768
++L WL + + + + L L +++ KVL +DL + ++ NSL ++
Sbjct: 450 KELNDWLTKTEERTRKMEEEPLGPDLEDLKRQVQQHKVLQEDLEQEQVRVNSLTHMVVVV 509
Query: 769 CPSSDKHALVTPWLKGDILGEKLVNLADCLCNEDLESRVSSESHFSERWTLLSLVLS--Q 826
SS HA + +LG++ N+ C ED RW LL +L Q
Sbjct: 510 DESSGDHATAALEEQLKVLGDRWANI--CRWTED-------------RWVLLQDILLKWQ 554
Query: 827 HVKNDYLIGDVYV---ERIIVRLHETLFKTKKLSEAESSDSSVSFI-CDVAYNYFSSAKG 882
+ + + ++ E + ++H T FK + +E SS ++ + D+ S K
Sbjct: 555 RLTEEQCLFSAWLSEKEDAVNKIHTTGFKDQ--NEMLSSLQKLAVLKADLEKKKQSMGK- 611
Query: 883 CLLMPSSEDLLLTLFQLCAQSKEKTHLPDFLIC 915
L +DLL TL K + L +F C
Sbjct: 612 --LYSLKQDLLSTLKNKSVTQKTEAWLDNFARC 642
>gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]
Length = 3562
Score = 33.5 bits (75), Expect = 1.9
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 710 QKLIGWLNEDQRKDFGFLVDILYSALRCCDNDMERKKVL-DDLTKVDLKWNSLLKIIEKA 768
++L WL + + + + L L +++ KVL +DL + ++ NSL ++
Sbjct: 335 KELNDWLTKTEERTRKMEEEPLGPDLEDLKRQVQQHKVLQEDLEQEQVRVNSLTHMVVVV 394
Query: 769 CPSSDKHALVTPWLKGDILGEKLVNLADCLCNEDLESRVSSESHFSERWTLLSLVLS--Q 826
SS HA + +LG++ N+ C ED RW LL +L Q
Sbjct: 395 DESSGDHATAALEEQLKVLGDRWANI--CRWTED-------------RWVLLQDILLKWQ 439
Query: 827 HVKNDYLIGDVYV---ERIIVRLHETLFKTKKLSEAESSDSSVSFI-CDVAYNYFSSAKG 882
+ + + ++ E + ++H T FK + +E SS ++ + D+ S K
Sbjct: 440 RLTEEQCLFSAWLSEKEDAVNKIHTTGFKDQ--NEMLSSLQKLAVLKADLEKKKQSMGK- 496
Query: 883 CLLMPSSEDLLLTLFQLCAQSKEKTHLPDFLIC 915
L +DLL TL K + L +F C
Sbjct: 497 --LYSLKQDLLSTLKNKSVTQKTEAWLDNFARC 527
>gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]
Length = 3681
Score = 33.5 bits (75), Expect = 1.9
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 710 QKLIGWLNEDQRKDFGFLVDILYSALRCCDNDMERKKVL-DDLTKVDLKWNSLLKIIEKA 768
++L WL + + + + L L +++ KVL +DL + ++ NSL ++
Sbjct: 454 KELNDWLTKTEERTRKMEEEPLGPDLEDLKRQVQQHKVLQEDLEQEQVRVNSLTHMVVVV 513
Query: 769 CPSSDKHALVTPWLKGDILGEKLVNLADCLCNEDLESRVSSESHFSERWTLLSLVLS--Q 826
SS HA + +LG++ N+ C ED RW LL +L Q
Sbjct: 514 DESSGDHATAALEEQLKVLGDRWANI--CRWTED-------------RWVLLQDILLKWQ 558
Query: 827 HVKNDYLIGDVYV---ERIIVRLHETLFKTKKLSEAESSDSSVSFI-CDVAYNYFSSAKG 882
+ + + ++ E + ++H T FK + +E SS ++ + D+ S K
Sbjct: 559 RLTEEQCLFSAWLSEKEDAVNKIHTTGFKDQ--NEMLSSLQKLAVLKADLEKKKQSMGK- 615
Query: 883 CLLMPSSEDLLLTLFQLCAQSKEKTHLPDFLIC 915
L +DLL TL K + L +F C
Sbjct: 616 --LYSLKQDLLSTLKNKSVTQKTEAWLDNFARC 646
>gi|5032285 dystrophin Dp427l isoform [Homo sapiens]
Length = 3562
Score = 33.5 bits (75), Expect = 1.9
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 710 QKLIGWLNEDQRKDFGFLVDILYSALRCCDNDMERKKVL-DDLTKVDLKWNSLLKIIEKA 768
++L WL + + + + L L +++ KVL +DL + ++ NSL ++
Sbjct: 335 KELNDWLTKTEERTRKMEEEPLGPDLEDLKRQVQQHKVLQEDLEQEQVRVNSLTHMVVVV 394
Query: 769 CPSSDKHALVTPWLKGDILGEKLVNLADCLCNEDLESRVSSESHFSERWTLLSLVLS--Q 826
SS HA + +LG++ N+ C ED RW LL +L Q
Sbjct: 395 DESSGDHATAALEEQLKVLGDRWANI--CRWTED-------------RWVLLQDILLKWQ 439
Query: 827 HVKNDYLIGDVYV---ERIIVRLHETLFKTKKLSEAESSDSSVSFI-CDVAYNYFSSAKG 882
+ + + ++ E + ++H T FK + +E SS ++ + D+ S K
Sbjct: 440 RLTEEQCLFSAWLSEKEDAVNKIHTTGFKDQ--NEMLSSLQKLAVLKADLEKKKQSMGK- 496
Query: 883 CLLMPSSEDLLLTLFQLCAQSKEKTHLPDFLIC 915
L +DLL TL K + L +F C
Sbjct: 497 --LYSLKQDLLSTLKNKSVTQKTEAWLDNFARC 527
>gi|5032283 dystrophin Dp427m isoform [Homo sapiens]
Length = 3685
Score = 33.5 bits (75), Expect = 1.9
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 710 QKLIGWLNEDQRKDFGFLVDILYSALRCCDNDMERKKVL-DDLTKVDLKWNSLLKIIEKA 768
++L WL + + + + L L +++ KVL +DL + ++ NSL ++
Sbjct: 458 KELNDWLTKTEERTRKMEEEPLGPDLEDLKRQVQQHKVLQEDLEQEQVRVNSLTHMVVVV 517
Query: 769 CPSSDKHALVTPWLKGDILGEKLVNLADCLCNEDLESRVSSESHFSERWTLLSLVLS--Q 826
SS HA + +LG++ N+ C ED RW LL +L Q
Sbjct: 518 DESSGDHATAALEEQLKVLGDRWANI--CRWTED-------------RWVLLQDILLKWQ 562
Query: 827 HVKNDYLIGDVYV---ERIIVRLHETLFKTKKLSEAESSDSSVSFI-CDVAYNYFSSAKG 882
+ + + ++ E + ++H T FK + +E SS ++ + D+ S K
Sbjct: 563 RLTEEQCLFSAWLSEKEDAVNKIHTTGFKDQ--NEMLSSLQKLAVLKADLEKKKQSMGK- 619
Query: 883 CLLMPSSEDLLLTLFQLCAQSKEKTHLPDFLIC 915
L +DLL TL K + L +F C
Sbjct: 620 --LYSLKQDLLSTLKNKSVTQKTEAWLDNFARC 650
>gi|21040269 ring finger protein 133 [Homo sapiens]
Length = 376
Score = 33.5 bits (75), Expect = 1.9
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 1714 RVGVAVQQWRNWMLQLSTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNY 1773
R+ +A Q R W +L+T L + G + L + K ++ + C+ICF Y
Sbjct: 212 RLCLARIQNRRWQ-RLTTDLQNTFGQLQ--LRVVKEGDEEINPNGDSCVICFE-----RY 263
Query: 1774 SLPKKACR--TCKKKFHSACLYKWFTSSNKSTCPLCR 1808
P R TCK FH C+ W TCP+C+
Sbjct: 264 K-PNDIVRILTCKHFFHKNCIDPWILP--HGTCPICK 297
>gi|19923981 IQ motif containing D [Homo sapiens]
Length = 347
Score = 33.5 bits (75), Expect = 1.9
Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 48/246 (19%)
Query: 373 IEDCWLHVNAKKSVFPKLSTVIREGGRGLATVIYPYLLPFISKLPQSITNPKLDFFKNFL 432
+ D L + +KS L I++ + + ++ P ++L Q T + +NF+
Sbjct: 127 LRDRLLSIELQKSSLSPLMQQIKDSTKNVLRLLLSN--PQAARLLQMQTQGRSAEAQNFI 184
Query: 433 TSLVA--GLSTERTKTSSLESSAVISAFFECLRFIMQQNLGEEEIEQMLVNDQLIPFIDA 490
SL+ G E+ TS +E+ + L+ I +QN ++I ID
Sbjct: 185 DSLIELRGFLFEKLLTSPMEARDKA----QFLQDISRQNSNNQQI------------IDT 228
Query: 491 VLKDPGLQHGQLFNHLAETLSSWEAKADTEKDEKTAHNLENVLIHFWERLSEICVAKIS- 549
+ K+ LAE + + A+ + E D H E + + R ++ V + +
Sbjct: 229 LEKE-----------LAERMKNRNAEEELE-DLDAVHREEKISLEELRRRHKVLVGEFAQ 276
Query: 550 -------------EPEADVESVLGVSNLLQVLQKPK--SSLKSSKKKNGKVRFADEILES 594
E E ++ ++ + L+Q L K SL SKKK GK + D+
Sbjct: 277 IREEREINSKKRMEAEQEMVRMVRAATLIQALWKGYLVRSLLRSKKKRGKGKAKDKEKGK 336
Query: 595 NKENEK 600
K EK
Sbjct: 337 QKGKEK 342
>gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo
sapiens]
Length = 183
Score = 33.1 bits (74), Expect = 2.5
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 1752 DKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCR 1808
DK E + +C+IC + F P + C CK FH C+ W S TCP CR
Sbjct: 79 DKSEEEMPECVIC---LLEFVCGDPIR-CLPCKHFFHLDCIDTWLLRS--FTCPYCR 129
>gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo
sapiens]
Length = 183
Score = 33.1 bits (74), Expect = 2.5
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 1752 DKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCR 1808
DK E + +C+IC + F P + C CK FH C+ W S TCP CR
Sbjct: 79 DKSEEEMPECVIC---LLEFVCGDPIR-CLPCKHFFHLDCIDTWLLRS--FTCPYCR 129
>gi|40805104 topoisomerase I binding, arginine/serine-rich [Homo
sapiens]
Length = 1045
Score = 33.1 bits (74), Expect = 2.5
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
Query: 1761 CMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETF 1811
C IC +Y C KF C+ +W S NK+ CPLC++ F
Sbjct: 103 CPICLDRFDNVSY------LDRCLHKFCFRCVQEW--SKNKAECPLCKQPF 145
>gi|7706039 ring finger protein 181 [Homo sapiens]
Length = 153
Score = 33.1 bits (74), Expect = 2.5
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 1783 CKKKFHSACLYKWFTSSNKSTCPLCR 1808
C FHS+C+ W + +N +CPLCR
Sbjct: 94 CHHLFHSSCILPWLSKTN--SCPLCR 117
>gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 33.1 bits (74), Expect = 2.5
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Query: 1757 GVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCR 1808
G C IC V N + K C K+H C +W +S CP C+
Sbjct: 1953 GASSCEICHEVFKSKNVRVLK-----CGHKYHKGCFKQWL--KGQSACPACQ 1997
>gi|157785668 coiled-coil domain containing 39 [Homo sapiens]
Length = 941
Score = 33.1 bits (74), Expect = 2.5
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 502 LFNHLAETLSSWEAKADTEKDEKTAHNLENVLIHFWERLSEICVAKISEPEADVES-VLG 560
L N L ET+S+ +D + HN LI WE E ++ + + D+++ L
Sbjct: 192 LDNELTETISAQLELDKAAQDFRKIHNERQELIKQWENTIE----QMQKRDGDIDNCALE 247
Query: 561 VSNLLQVLQKPKSSLKSSKKKNGKVRFADEILESNKENEKCVSSEGEKI 609
++ + Q ++ ++ +K K++F + + +N E EK +S K+
Sbjct: 248 LARIKQETREKENLVKE------KIKFLESEIGNNTEFEKRISVADRKL 290
>gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 33.1 bits (74), Expect = 2.5
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Query: 1757 GVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCR 1808
G C IC V N + K C K+H C +W +S CP C+
Sbjct: 1953 GASSCEICHEVFKSKNVRVLK-----CGHKYHKGCFKQWL--KGQSACPACQ 1997
>gi|22212927 nuclear transcription factor, X-box binding 1 isoform 3
[Homo sapiens]
Length = 833
Score = 32.7 bits (73), Expect = 3.3
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 1760 DCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKST-------CPLCR 1808
+CM+C ++ + P +C++C FH C+ KW S CP C+
Sbjct: 357 ECMVCCELVR---VTAPVWSCQSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQ 409
>gi|22212925 nuclear transcription factor, X-box binding 1 isoform 2
[Homo sapiens]
Length = 1024
Score = 32.7 bits (73), Expect = 3.3
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 1760 DCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKST-------CPLCR 1808
+CM+C ++ + P +C++C FH C+ KW S CP C+
Sbjct: 357 ECMVCCELVR---VTAPVWSCQSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQ 409
>gi|21361137 nuclear transcription factor, X-box binding 1 isoform 1
[Homo sapiens]
Length = 1120
Score = 32.7 bits (73), Expect = 3.3
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 1760 DCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKST-------CPLCR 1808
+CM+C ++ + P +C++C FH C+ KW S CP C+
Sbjct: 357 ECMVCCELVR---VTAPVWSCQSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQ 409
>gi|125628636 keratin 80 isoform a [Homo sapiens]
Length = 452
Score = 32.7 bits (73), Expect = 3.3
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 30/187 (16%)
Query: 466 MQQNLGEEEIEQMLVNDQLIPFIDAVLKDPGLQHGQLFNHLAETLSSWEAKADTEKDEKT 525
+QQ +E+ E +ND+ I V Q + N L ET S+ + +
Sbjct: 76 VQQLKNQEKEEMKALNDKFASLIGKV------QALEQRNQLLETRWSF-----LQGQDSA 124
Query: 526 AHNLENVLIHFWERLSEICVAKISEPEADVESVLGVSNLLQVLQKPKSSLKSSKKKNGKV 585
+L ++ + RL E + K+S+ +E+ NLLQVL+K + ++
Sbjct: 125 IFDLGHLYEEYQGRLQEE-LRKVSQERGQLEA-----NLLQVLEKVEEF---------RI 169
Query: 586 RFADEILESNKENEKCVSS----EGEKIEGWELTTEPSLTHNSSGLLSPLRKKPLEDLVC 641
R+ DEI + V + E + EL T+ + L+ + ++ L+DL
Sbjct: 170 RYEDEISKRTDMEFTFVQLKKDLDAECLHRTELETKLKSLESFVELMKTIYEQELKDLAA 229
Query: 642 KLADISI 648
++ D+S+
Sbjct: 230 QVKDVSV 236
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,226,515
Number of Sequences: 37866
Number of extensions: 2888476
Number of successful extensions: 8034
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 7967
Number of HSP's gapped (non-prelim): 140
length of query: 1812
length of database: 18,247,518
effective HSP length: 117
effective length of query: 1695
effective length of database: 13,817,196
effective search space: 23420147220
effective search space used: 23420147220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.