Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 23111030
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23111030 sorting nexin 12 [Homo sapiens]
(162 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23111030 sorting nexin 12 [Homo sapiens] 331 1e-91
gi|4507143 sorting nexin 3 isoform a [Homo sapiens] 274 2e-74
gi|23111041 sorting nexin 3 isoform b [Homo sapiens] 201 2e-52
gi|23111026 sorting nexin 11 [Homo sapiens] 77 8e-15
gi|23111028 sorting nexin 11 [Homo sapiens] 77 8e-15
gi|23111036 sorting nexin 1 isoform c [Homo sapiens] 76 1e-14
gi|23111034 sorting nexin 1 isoform a [Homo sapiens] 76 1e-14
gi|23111023 sorting nexin 10 [Homo sapiens] 71 4e-13
gi|23111055 sorting nexin 7 isoform b [Homo sapiens] 71 5e-13
gi|194294540 sorting nexin 7 isoform a [Homo sapiens] 71 5e-13
gi|23111032 sorting nexin 1 isoform b [Homo sapiens] 68 3e-12
gi|153791707 sorting nexin family member 30 [Homo sapiens] 68 3e-12
gi|23111038 sorting nexin 2 [Homo sapiens] 67 7e-12
gi|4507145 sorting nexin 4 [Homo sapiens] 52 3e-07
gi|224177511 sorting nexin 18 isoform c [Homo sapiens] 47 6e-06
gi|157057545 sorting nexin 18 isoform a [Homo sapiens] 47 6e-06
gi|157057543 sorting nexin 18 isoform b [Homo sapiens] 47 6e-06
gi|23111047 sorting nexin 5 [Homo sapiens] 47 7e-06
gi|7657599 sorting nexin 5 [Homo sapiens] 47 7e-06
gi|31563383 serum/glucocorticoid regulated kinase 3 isoform 2 [H... 46 1e-05
gi|31563382 serum/glucocorticoid regulated kinase 3 isoform 1 [H... 46 1e-05
gi|75813626 serum/glucocorticoid regulated kinase 3 isoform 1 [H... 46 1e-05
gi|31543452 PX domain containing serine/threonine kinase [Homo s... 45 3e-05
gi|23397574 sorting nexin 33 [Homo sapiens] 43 1e-04
gi|23943858 sorting nexin 8 [Homo sapiens] 42 2e-04
gi|7706706 sorting nexin 9 [Homo sapiens] 42 3e-04
gi|88703041 sorting nexin 6 isoform b [Homo sapiens] 41 5e-04
gi|23238244 sorting nexin 16 isoform a [Homo sapiens] 37 0.006
gi|23238246 sorting nexin 16 isoform a [Homo sapiens] 37 0.006
gi|72534838 sorting nexin 6B [Homo sapiens] 37 0.010
>gi|23111030 sorting nexin 12 [Homo sapiens]
Length = 162
Score = 331 bits (849), Expect = 1e-91
Identities = 162/162 (100%), Positives = 162/162 (100%)
Query: 1 MSDTAVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPI 60
MSDTAVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPI
Sbjct: 1 MSDTAVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPI 60
Query: 61 FKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERR 120
FKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERR
Sbjct: 61 FKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERR 120
Query: 121 QGLEQFINKIAGHPLAQNERCLHMFLQEEAIDRNYVPGKVRQ 162
QGLEQFINKIAGHPLAQNERCLHMFLQEEAIDRNYVPGKVRQ
Sbjct: 121 QGLEQFINKIAGHPLAQNERCLHMFLQEEAIDRNYVPGKVRQ 162
>gi|4507143 sorting nexin 3 isoform a [Homo sapiens]
Length = 162
Score = 274 bits (701), Expect = 2e-74
Identities = 128/161 (79%), Positives = 150/161 (93%), Gaps = 1/161 (0%)
Query: 1 MSDTAVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPI 60
M++T VADTRRL +KPQ+L DAYGPPSNFLEID+ NPQTVGVGR RFTTYE+R++TNLPI
Sbjct: 1 MAET-VADTRRLITKPQNLNDAYGPPSNFLEIDVSNPQTVGVGRGRFTTYEIRVKTNLPI 59
Query: 61 FKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERR 120
FKLKES VRRRYSDFEWL++ELER+SK+VVPPLPGKA RQLPFRGD+GIF+++FIEER+
Sbjct: 60 FKLKESTVRRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLPFRGDDGIFDDNFIEERK 119
Query: 121 QGLEQFINKIAGHPLAQNERCLHMFLQEEAIDRNYVPGKVR 161
QGLEQFINK+AGHPLAQNERCLHMFLQ+E ID++Y P K+R
Sbjct: 120 QGLEQFINKVAGHPLAQNERCLHMFLQDEIIDKSYTPSKIR 160
>gi|23111041 sorting nexin 3 isoform b [Homo sapiens]
Length = 130
Score = 201 bits (512), Expect = 2e-52
Identities = 101/161 (62%), Positives = 119/161 (73%), Gaps = 33/161 (20%)
Query: 1 MSDTAVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPI 60
M++T VADTRRL +KPQ+L DAYGPPSNFLEID+ NPQTVGVGR RFTTYE+R+
Sbjct: 1 MAET-VADTRRLITKPQNLNDAYGPPSNFLEIDVSNPQTVGVGRGRFTTYEIRV------ 53
Query: 61 FKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERR 120
K+VVPPLPGKA RQLPFRGD+GIF+++FIEER+
Sbjct: 54 --------------------------KVVVPPLPGKAFLRQLPFRGDDGIFDDNFIEERK 87
Query: 121 QGLEQFINKIAGHPLAQNERCLHMFLQEEAIDRNYVPGKVR 161
QGLEQFINK+AGHPLAQNERCLHMFLQ+E ID++Y P K+R
Sbjct: 88 QGLEQFINKVAGHPLAQNERCLHMFLQDEIIDKSYTPSKIR 128
>gi|23111026 sorting nexin 11 [Homo sapiens]
Length = 270
Score = 76.6 bits (187), Expect = 8e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 10/104 (9%)
Query: 47 FTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELERDSKIV-VPPLPGKALKRQLPFR 105
+ Y++ + TN F K SCVRRRY +F WL+ +L+R++ +V VP LPGK+ F
Sbjct: 35 YVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKS-----TFF 89
Query: 106 GDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEE 149
G + FIE+RRQGL+ F+ K+ + ++ LH+FLQ +
Sbjct: 90 GT----SDEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQ 129
>gi|23111028 sorting nexin 11 [Homo sapiens]
Length = 270
Score = 76.6 bits (187), Expect = 8e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 10/104 (9%)
Query: 47 FTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELERDSKIV-VPPLPGKALKRQLPFR 105
+ Y++ + TN F K SCVRRRY +F WL+ +L+R++ +V VP LPGK+ F
Sbjct: 35 YVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKS-----TFF 89
Query: 106 GDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEE 149
G + FIE+RRQGL+ F+ K+ + ++ LH+FLQ +
Sbjct: 90 GT----SDEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQ 129
>gi|23111036 sorting nexin 1 isoform c [Homo sapiens]
Length = 474
Score = 75.9 bits (185), Expect = 1e-14
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 17/155 (10%)
Query: 16 PQDLTDAYGPPSNFLEID-------------IFNPQTVGVGRARFTTYEVRMRTNLPIFK 62
PQ+ T++ P + E++ I +P+ +G G + Y+V +T+LP+F+
Sbjct: 118 PQEATNSSKPQPTYEELEEEEQEDQFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLPLFR 177
Query: 63 LKESCVRRRYSDFEWLKNEL-ERDSK--IVVPPLPGKALKRQLPFR-GDEGIFEESFIEE 118
K+ V+RR+SDF L +L E+ S+ +VPP P K+L + G E F+E+
Sbjct: 178 SKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEK 237
Query: 119 RRQGLEQFINKIAGHPLAQNERCLHMFLQEEAIDR 153
RR LE+++ +I HP + + FL++E + R
Sbjct: 238 RRAALERYLQRIVNHPTMLQDPDVREFLEKEELPR 272
>gi|23111034 sorting nexin 1 isoform a [Homo sapiens]
Length = 522
Score = 75.9 bits (185), Expect = 1e-14
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 17/155 (10%)
Query: 16 PQDLTDAYGPPSNFLEID-------------IFNPQTVGVGRARFTTYEVRMRTNLPIFK 62
PQ+ T++ P + E++ I +P+ +G G + Y+V +T+LP+F+
Sbjct: 118 PQEATNSSKPQPTYEELEEEEQEDQFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLPLFR 177
Query: 63 LKESCVRRRYSDFEWLKNEL-ERDSK--IVVPPLPGKALKRQLPFR-GDEGIFEESFIEE 118
K+ V+RR+SDF L +L E+ S+ +VPP P K+L + G E F+E+
Sbjct: 178 SKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEK 237
Query: 119 RRQGLEQFINKIAGHPLAQNERCLHMFLQEEAIDR 153
RR LE+++ +I HP + + FL++E + R
Sbjct: 238 RRAALERYLQRIVNHPTMLQDPDVREFLEKEELPR 272
>gi|23111023 sorting nexin 10 [Homo sapiens]
Length = 201
Score = 71.2 bits (173), Expect = 4e-13
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 47 FTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELERDSKIV-VPPLPGKALKRQLPFR 105
+ YE+ + TN F +K SCVRRRY +F WL+ L+ ++ +V +P LP K L + R
Sbjct: 29 YIDYEICIHTNSMCFTMKTSCVRRRYREFVWLRQRLQSNALLVQLPELPSKNLFFNMNNR 88
Query: 106 GDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQ 147
+++RRQGLE F+ K+ + L ++ LH+FLQ
Sbjct: 89 --------QHVDQRRQGLEDFLRKVLQNALLLSDSSLHLFLQ 122
>gi|23111055 sorting nexin 7 isoform b [Homo sapiens]
Length = 336
Score = 70.9 bits (172), Expect = 5e-13
Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 25 PPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELER 84
P L I + P++ F TY + +T+ F E VRRRY DF WLK +LE
Sbjct: 27 PDLKDLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEE 86
Query: 85 -DSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLH 143
+++PPLP K + + + R F + FIE RR+ L +F+N+IA HP
Sbjct: 87 AHPTLIIPPLPEKFIVKGMVER-----FNDDFIETRRKALHKFLNRIADHPTLTFNEDFK 141
Query: 144 MFLQEEA 150
+FL +A
Sbjct: 142 IFLTAQA 148
>gi|194294540 sorting nexin 7 isoform a [Homo sapiens]
Length = 451
Score = 70.9 bits (172), Expect = 5e-13
Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 25 PPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELER 84
P L I + P++ F TY + +T+ F E VRRRY DF WLK +LE
Sbjct: 91 PDLKDLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEE 150
Query: 85 -DSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLH 143
+++PPLP K + + + R F + FIE RR+ L +F+N+IA HP
Sbjct: 151 AHPTLIIPPLPEKFIVKGMVER-----FNDDFIETRRKALHKFLNRIADHPTLTFNEDFK 205
Query: 144 MFLQEEA 150
+FL +A
Sbjct: 206 IFLTAQA 212
>gi|23111032 sorting nexin 1 isoform b [Homo sapiens]
Length = 457
Score = 68.2 bits (165), Expect = 3e-12
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
Query: 41 GVGRARFTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNEL-ERDSK--IVVPPLPGKA 97
G G + Y+V +T+LP+F+ K+ V+RR+SDF L +L E+ S+ +VPP P K+
Sbjct: 91 GDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKS 150
Query: 98 LKRQLPFR-GDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEEAIDR 153
L + G E F+E+RR LE+++ +I HP + + FL++E + R
Sbjct: 151 LIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEELPR 207
>gi|153791707 sorting nexin family member 30 [Homo sapiens]
Length = 437
Score = 68.2 bits (165), Expect = 3e-12
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 47 FTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELERDSKI-VVPPLPGKALKRQLPFR 105
+ TY + ++ F L E VRRRY DF+WL+++LE ++PPLP K + + + R
Sbjct: 108 YITYRITTKSTRVEFDLPEYSVRRRYQDFDWLRSKLEESQPTHLIPPLPEKFVVKGVVDR 167
Query: 106 GDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFL 146
F E F+E RR+ L++F+ +I HP+ ++FL
Sbjct: 168 -----FSEEFVETRRKALDKFLKRITDHPVLSFNEHFNIFL 203
>gi|23111038 sorting nexin 2 [Homo sapiens]
Length = 519
Score = 67.0 bits (162), Expect = 7e-12
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 30 LEIDIFNPQTVGVGRARFTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELER---DS 86
+EI + +P+ VG G + Y V +T+L +F E V+RR+SDF L ++L
Sbjct: 142 IEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLHV 201
Query: 87 KIVVPPLPGKALKRQLPFR-GDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMF 145
+VPP P K++ + G E F+E+RR LE+++ + HP + L F
Sbjct: 202 GYIVPPAPEKSIVGMTKVKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQF 261
Query: 146 LQEEAIDR 153
L+ + R
Sbjct: 262 LESSELPR 269
>gi|4507145 sorting nexin 4 [Homo sapiens]
Length = 450
Score = 51.6 bits (122), Expect = 3e-07
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 70 RRYSDFEWLKNEL-ERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFIN 128
RRYS+FE L++ L IVVPPLP K + + + + F+E RR GLE F+
Sbjct: 105 RRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNM-DPDFVERRRIGLENFLL 163
Query: 129 KIAGHPLAQNERCLHMFLQEE 149
+IA HP+ ++ ++FL +E
Sbjct: 164 RIASHPILCRDKIFYLFLTQE 184
>gi|224177511 sorting nexin 18 isoform c [Homo sapiens]
Length = 591
Score = 47.4 bits (111), Expect = 6e-06
Identities = 43/124 (34%), Positives = 56/124 (45%), Gaps = 20/124 (16%)
Query: 32 IDIFNPQTVGVGRARFTTYE-VRMRTNLPIFKLKESCVRRRYSDFEWLKNEL-ERDSKIV 89
ID QT G + +Y+ V T +P V RRY F+WL L E+ I
Sbjct: 280 IDDPTKQTKFKGMKSYISYKLVPTHTQVP--------VHRRYKHFDWLYARLAEKFPVIS 331
Query: 90 VPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFINKIAGHP-LAQNERCLHMFLQE 148
VP LP K G FEE FI +RR+GL ++N +A HP LAQ + H
Sbjct: 332 VPHLPEKQAT---------GRFEEDFISKRRKGLIWWMNHMASHPVLAQCDVFQHFLTCP 382
Query: 149 EAID 152
+ D
Sbjct: 383 SSTD 386
>gi|157057545 sorting nexin 18 isoform a [Homo sapiens]
Length = 624
Score = 47.4 bits (111), Expect = 6e-06
Identities = 43/124 (34%), Positives = 56/124 (45%), Gaps = 20/124 (16%)
Query: 32 IDIFNPQTVGVGRARFTTYE-VRMRTNLPIFKLKESCVRRRYSDFEWLKNEL-ERDSKIV 89
ID QT G + +Y+ V T +P V RRY F+WL L E+ I
Sbjct: 280 IDDPTKQTKFKGMKSYISYKLVPTHTQVP--------VHRRYKHFDWLYARLAEKFPVIS 331
Query: 90 VPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFINKIAGHP-LAQNERCLHMFLQE 148
VP LP K G FEE FI +RR+GL ++N +A HP LAQ + H
Sbjct: 332 VPHLPEKQAT---------GRFEEDFISKRRKGLIWWMNHMASHPVLAQCDVFQHFLTCP 382
Query: 149 EAID 152
+ D
Sbjct: 383 SSTD 386
>gi|157057543 sorting nexin 18 isoform b [Homo sapiens]
Length = 628
Score = 47.4 bits (111), Expect = 6e-06
Identities = 43/124 (34%), Positives = 56/124 (45%), Gaps = 20/124 (16%)
Query: 32 IDIFNPQTVGVGRARFTTYE-VRMRTNLPIFKLKESCVRRRYSDFEWLKNEL-ERDSKIV 89
ID QT G + +Y+ V T +P V RRY F+WL L E+ I
Sbjct: 280 IDDPTKQTKFKGMKSYISYKLVPTHTQVP--------VHRRYKHFDWLYARLAEKFPVIS 331
Query: 90 VPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFINKIAGHP-LAQNERCLHMFLQE 148
VP LP K G FEE FI +RR+GL ++N +A HP LAQ + H
Sbjct: 332 VPHLPEKQAT---------GRFEEDFISKRRKGLIWWMNHMASHPVLAQCDVFQHFLTCP 382
Query: 149 EAID 152
+ D
Sbjct: 383 SSTD 386
>gi|23111047 sorting nexin 5 [Homo sapiens]
Length = 404
Score = 47.0 bits (110), Expect = 7e-06
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 23/121 (19%)
Query: 50 YEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELERDSK---IVVPPLP------GKALKR 100
+ V +T LP F+ E V R++ DF WL + L + +++PP P G K
Sbjct: 47 FTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDTLIETTDYAGLIIPPAPTKPDFDGPREKM 106
Query: 101 QLPFRGDEGIFEESFIEERRQ--------------GLEQFINKIAGHPLAQNERCLHMFL 146
Q G+ + +E F + +++ E F+ +++ HP+ +R H+FL
Sbjct: 107 QKLGEGEGSMTKEEFAKMKQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHVFL 166
Query: 147 Q 147
+
Sbjct: 167 E 167
>gi|7657599 sorting nexin 5 [Homo sapiens]
Length = 404
Score = 47.0 bits (110), Expect = 7e-06
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 23/121 (19%)
Query: 50 YEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELERDSK---IVVPPLP------GKALKR 100
+ V +T LP F+ E V R++ DF WL + L + +++PP P G K
Sbjct: 47 FTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDTLIETTDYAGLIIPPAPTKPDFDGPREKM 106
Query: 101 QLPFRGDEGIFEESFIEERRQ--------------GLEQFINKIAGHPLAQNERCLHMFL 146
Q G+ + +E F + +++ E F+ +++ HP+ +R H+FL
Sbjct: 107 QKLGEGEGSMTKEEFAKMKQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHVFL 166
Query: 147 Q 147
+
Sbjct: 167 E 167
>gi|31563383 serum/glucocorticoid regulated kinase 3 isoform 2 [Homo
sapiens]
Length = 464
Score = 46.2 bits (108), Expect = 1e-05
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 44 RARFTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLP 103
+ RFT Y+V + E V RRY++F+ L N L++ + +P K +
Sbjct: 28 KKRFTVYKVLVSVGR-----SEWFVFRRYAEFDKLYNTLKKQFPAMALKIPAKRIF---- 78
Query: 104 FRGDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEEA 150
GD F+ FI++RR GL +FI + +P N + FLQ ++
Sbjct: 79 --GDN--FDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDS 121
>gi|31563382 serum/glucocorticoid regulated kinase 3 isoform 1 [Homo
sapiens]
Length = 496
Score = 46.2 bits (108), Expect = 1e-05
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 44 RARFTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLP 103
+ RFT Y+V + E V RRY++F+ L N L++ + +P K +
Sbjct: 28 KKRFTVYKVLVSVGR-----SEWFVFRRYAEFDKLYNTLKKQFPAMALKIPAKRIF---- 78
Query: 104 FRGDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEEA 150
GD F+ FI++RR GL +FI + +P N + FLQ ++
Sbjct: 79 --GDN--FDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDS 121
>gi|75813626 serum/glucocorticoid regulated kinase 3 isoform 1 [Homo
sapiens]
Length = 496
Score = 46.2 bits (108), Expect = 1e-05
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 44 RARFTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLP 103
+ RFT Y+V + E V RRY++F+ L N L++ + +P K +
Sbjct: 28 KKRFTVYKVLVSVGR-----SEWFVFRRYAEFDKLYNTLKKQFPAMALKIPAKRIF---- 78
Query: 104 FRGDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEEA 150
GD F+ FI++RR GL +FI + +P N + FLQ ++
Sbjct: 79 --GDN--FDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDS 121
>gi|31543452 PX domain containing serine/threonine kinase [Homo
sapiens]
Length = 578
Score = 45.1 bits (105), Expect = 3e-05
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 17/142 (11%)
Query: 25 PPSNFLEIDIFNPQTVGVGRAR----FTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKN 80
PP+ + +D P T + ++ T Y +R++ + + + + RRYSDF+ L N
Sbjct: 7 PPAGKVLLDDTVPLTAAIEASQSLQSHTEYIIRVQRGISVENSWQ--IVRRYSDFDLLNN 64
Query: 81 ELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFINKIAGHPLAQNER 140
L+ + PLP K L G + FI ER++GL+ ++N I + + N
Sbjct: 65 SLQIAGLSL--PLPPKKLI---------GNMDREFIAERQKGLQNYLNVITTNHILSNCE 113
Query: 141 CLHMFLQEEAIDRNYVPGKVRQ 162
+ FL NY ++Q
Sbjct: 114 LVKKFLDPNNYSANYTEIALQQ 135
>gi|23397574 sorting nexin 33 [Homo sapiens]
Length = 574
Score = 42.7 bits (99), Expect = 1e-04
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 66 SCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQ 125
S V RRY F+WL N L ++ P LP + G FEE FIE+R++ L
Sbjct: 261 SPVYRRYKHFDWLYNRLLHKFTVISVP--------HLPEKQATGRFEEDFIEKRKRRLIL 312
Query: 126 FINKIAGHP-LAQNERCLH 143
+++ + HP L+Q E H
Sbjct: 313 WMDHMTSHPVLSQYEGFQH 331
>gi|23943858 sorting nexin 8 [Homo sapiens]
Length = 465
Score = 42.0 bits (97), Expect = 2e-04
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 65 ESCVRRRYSDFEWLKNEL-ERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGL 123
+S V RRY+DF + L + +VP LP K + + FIE RR+ L
Sbjct: 103 KSSVYRRYNDFVVFQEMLLHKFPYRMVPALPPKRMLGA----------DREFIEARRRAL 152
Query: 124 EQFINKIAGHPLAQNERCLHMFLQEEAID 152
++F+N +A HPL + L +FL D
Sbjct: 153 KRFVNLVARHPLFSEDVVLKLFLSFSGSD 181
>gi|7706706 sorting nexin 9 [Homo sapiens]
Length = 595
Score = 41.6 bits (96), Expect = 3e-04
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 68 VRRRYSDFEWLKNEL--ERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQ 125
V RY F+WL L + S I +P LP K + G FEE FI+ R + L+
Sbjct: 283 VNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVT---------GRFEEEFIKMRMERLQA 333
Query: 126 FINKIAGHPLAQNERCLHMFL 146
++ ++ HP+ FL
Sbjct: 334 WMTRMCRHPVISESEVFQQFL 354
>gi|88703041 sorting nexin 6 isoform b [Homo sapiens]
Length = 418
Score = 40.8 bits (94), Expect = 5e-04
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 23/121 (19%)
Query: 50 YEVRMRTNLPIFKLKESCVRRRYSDFEWLKN---ELERDSKIVVPPLPGK----ALKRQL 102
+ V +++LP FK E V R++ +F WL + E E + ++PP P + A + +L
Sbjct: 60 FTVHTKSSLPNFKQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREKL 119
Query: 103 PFRGD-EGIFEESFIEERRQGLEQ---------------FINKIAGHPLAQNERCLHMFL 146
G+ EG + + +Q LE F+ ++A HP+ + + H+FL
Sbjct: 120 QKLGEGEGSMTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHVFL 179
Query: 147 Q 147
+
Sbjct: 180 E 180
>gi|23238244 sorting nexin 16 isoform a [Homo sapiens]
Length = 344
Score = 37.4 bits (85), Expect = 0.006
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 17/147 (11%)
Query: 4 TAVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVG----RARFTTYEVRMRTNLP 59
T A + +++P+D T+ P + E P +G RA+FT Y++ ++
Sbjct: 78 TGTASSIEYSTRPRD-TEEQNPETVNWEDRPSTPTILGYEVMEERAKFTVYKILVKKTPE 136
Query: 60 IFKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEER 119
+ V RRY+DF L ++L+ PG L P R + + F+E+R
Sbjct: 137 ----ESWVVFRRYTDFSRLNDKLKE-------MFPGFRLALP-PKRWFKDNYNADFLEDR 184
Query: 120 RQGLEQFINKIAGHPLAQNERCLHMFL 146
+ GL+ F+ + H N + FL
Sbjct: 185 QLGLQAFLQNLVAHKDIANCLAVREFL 211
>gi|23238246 sorting nexin 16 isoform a [Homo sapiens]
Length = 344
Score = 37.4 bits (85), Expect = 0.006
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 17/147 (11%)
Query: 4 TAVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVG----RARFTTYEVRMRTNLP 59
T A + +++P+D T+ P + E P +G RA+FT Y++ ++
Sbjct: 78 TGTASSIEYSTRPRD-TEEQNPETVNWEDRPSTPTILGYEVMEERAKFTVYKILVKKTPE 136
Query: 60 IFKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEER 119
+ V RRY+DF L ++L+ PG L P R + + F+E+R
Sbjct: 137 ----ESWVVFRRYTDFSRLNDKLKE-------MFPGFRLALP-PKRWFKDNYNADFLEDR 184
Query: 120 RQGLEQFINKIAGHPLAQNERCLHMFL 146
+ GL+ F+ + H N + FL
Sbjct: 185 QLGLQAFLQNLVAHKDIANCLAVREFL 211
>gi|72534838 sorting nexin 6B [Homo sapiens]
Length = 403
Score = 36.6 bits (83), Expect = 0.010
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 23/121 (19%)
Query: 50 YEVRMRTNLPIFKLKESCVRRRYSDFEWLKN---ELERDSKIVVPPLPGKA------LKR 100
+ V+ ++ LP F E V R++ +F WL + E E + +++PP P + K
Sbjct: 42 FTVQTKSCLPHFAQTEFSVVRQHEEFIWLHDAYVENEEYAGLIIPPAPPRPDFEASREKL 101
Query: 101 QLPFRGDEGIFEESFIEERRQ--------------GLEQFINKIAGHPLAQNERCLHMFL 146
Q GD + E F + +++ E F+ ++A HP + + +FL
Sbjct: 102 QKLGEGDSSVTREEFAKMKQELEAEYLAIFKKTVAMHEVFLQRLAAHPTLRRDHNFFVFL 161
Query: 147 Q 147
+
Sbjct: 162 E 162
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.139 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,629,762
Number of Sequences: 37866
Number of extensions: 276318
Number of successful extensions: 540
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 469
Number of HSP's gapped (non-prelim): 67
length of query: 162
length of database: 18,247,518
effective HSP length: 94
effective length of query: 68
effective length of database: 14,688,114
effective search space: 998791752
effective search space used: 998791752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.