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Search of human proteins with 229576894
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|229576894 F-box and WD repeat domain containing 12 isoform 2
[Homo sapiens]
(394 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|229576894 F-box and WD repeat domain containing 12 isoform 2 ... 816 0.0
gi|229576873 F-box and WD repeat domain containing 12 isoform 1 ... 746 0.0
gi|229576906 F-box and WD repeat domain containing 12 isoform 3 ... 692 0.0
gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens] 41 0.002
gi|27312027 F-box only protein 16 [Homo sapiens] 40 0.003
gi|16306595 S-phase kinase-associated protein 2 isoform 1 [Homo ... 39 0.006
gi|14249170 S-phase kinase-associated protein 2 isoform 2 [Homo ... 39 0.006
gi|16306582 F-box and leucine-rich repeat protein 2 [Homo sapiens] 38 0.014
gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens] 37 0.031
gi|30795121 F-box and WD repeat domain containing 8 isoform 2 [H... 36 0.069
gi|30795123 F-box and WD repeat domain containing 8 isoform 1 [H... 36 0.069
gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens] 35 0.090
gi|157743247 F-box protein 45 [Homo sapiens] 35 0.12
gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [H... 32 1.00
gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [H... 32 1.00
gi|161333854 F-box and leucine-rich repeat protein 13 isoform 2 ... 32 1.3
gi|161333852 F-box and leucine-rich repeat protein 13 isoform 1 ... 32 1.3
gi|111185922 F-box protein 36 [Homo sapiens] 32 1.3
gi|11545739 F-box and WD repeat domain containing 4 [Homo sapiens] 32 1.3
gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [H... 31 1.7
gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [H... 31 1.7
gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [H... 31 1.7
gi|24308129 F-box and WD repeat domain containing 5 [Homo sapiens] 31 1.7
gi|193211598 pleckstrin homology domain containing, family G (wi... 31 2.2
gi|193211596 pleckstrin homology domain containing, family G (wi... 31 2.2
gi|193211594 pleckstrin homology domain containing, family G (wi... 31 2.2
gi|55742734 pleckstrin homology domain containing, family G (wit... 31 2.2
gi|72198346 B-cell lymphoma protein 2 beta isoform [Homo sapiens] 30 2.9
gi|72198189 B-cell lymphoma protein 2 alpha isoform [Homo sapiens] 30 2.9
gi|39812106 tumor differentially expressed protein 1 [Homo sapiens] 30 2.9
>gi|229576894 F-box and WD repeat domain containing 12 isoform 2
[Homo sapiens]
Length = 394
Score = 816 bits (2109), Expect = 0.0
Identities = 394/394 (100%), Positives = 394/394 (100%)
Query: 1 MEIRLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHL 60
MEIRLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHL
Sbjct: 1 MEIRLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHL 60
Query: 61 GTHTWKQFFLHQRRKELRLALAQPHNFIYKVTKNIAFETELAYLSGNRLTVDEQEKSIIC 120
GTHTWKQFFLHQRRKELRLALAQPHNFIYKVTKNIAFETELAYLSGNRLTVDEQEKSIIC
Sbjct: 61 GTHTWKQFFLHQRRKELRLALAQPHNFIYKVTKNIAFETELAYLSGNRLTVDEQEKSIIC 120
Query: 121 SVSPKQELCAWDVQEVGDAAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACG 180
SVSPKQELCAWDVQEVGDAAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACG
Sbjct: 121 SVSPKQELCAWDVQEVGDAAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACG 180
Query: 181 TYSRTLPQVFLTESLLRPSEGSVPLSTFLPHKLCASACWTPKVKNRITLMSQSSTGKKTE 240
TYSRTLPQVFLTESLLRPSEGSVPLSTFLPHKLCASACWTPKVKNRITLMSQSSTGKKTE
Sbjct: 181 TYSRTLPQVFLTESLLRPSEGSVPLSTFLPHKLCASACWTPKVKNRITLMSQSSTGKKTE 240
Query: 241 FITFDLTTKKTGGQTVIQAYEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITG 300
FITFDLTTKKTGGQTVIQAYEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITG
Sbjct: 241 FITFDLTTKKTGGQTVIQAYEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITG 300
Query: 301 FLLQRFEDHQAAINNFWVDPCYVLTTSENSVHVYMWEEGGRHPYLRSCCHLENTWHDHTT 360
FLLQRFEDHQAAINNFWVDPCYVLTTSENSVHVYMWEEGGRHPYLRSCCHLENTWHDHTT
Sbjct: 301 FLLQRFEDHQAAINNFWVDPCYVLTTSENSVHVYMWEEGGRHPYLRSCCHLENTWHDHTT 360
Query: 361 DSCISSVMCDNASIVLRVRKVSDSSILVMYSLNT 394
DSCISSVMCDNASIVLRVRKVSDSSILVMYSLNT
Sbjct: 361 DSCISSVMCDNASIVLRVRKVSDSSILVMYSLNT 394
>gi|229576873 F-box and WD repeat domain containing 12 isoform 1
[Homo sapiens]
Length = 464
Score = 746 bits (1927), Expect = 0.0
Identities = 382/465 (82%), Positives = 387/465 (83%), Gaps = 72/465 (15%)
Query: 1 MEIRLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHL 60
MEIRLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHL
Sbjct: 1 MEIRLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHL 60
Query: 61 GTHTWKQFFLHQRRKELRLALAQPHNFIYKVTKNIAFETELAYLSGNRLTVDE------- 113
GTHTWKQFFLHQRRKELRLALAQPHNFIYKVTKNIAFETELAYLSGNRLTVDE
Sbjct: 61 GTHTWKQFFLHQRRKELRLALAQPHNFIYKVTKNIAFETELAYLSGNRLTVDEQEKSIIC 120
Query: 114 -------------QEKSIICSVSPKQE-----------------------LCAWDVQE-- 135
QE ++I S SP QE + W+ Q+
Sbjct: 121 SVSPKQELCAWDVQEGTMIWS-SPVQEFHFSNLVTLPQMHLAITMDRKKTIKVWNCQDRD 179
Query: 136 --------------------------VGDAAGDIYTFTLPGLRDVSKVTAFQYGIVLLHC 169
VGDAAGDIYTFTLPGLRDVSKVTAFQYGIVLLHC
Sbjct: 180 ALAVLPMPQPCYCMEAYLTKDGPFLMVGDAAGDIYTFTLPGLRDVSKVTAFQYGIVLLHC 239
Query: 170 SPDKKWVFACGTYSRTLPQVFLTESLLRPSEGSVPLSTFLPHKLCASACWTPKVKNRITL 229
SPDKKWVFACGTYSRTLPQVFLTESLLRPSEGSVPLSTFLPHKLCASACWTPKVKNRITL
Sbjct: 240 SPDKKWVFACGTYSRTLPQVFLTESLLRPSEGSVPLSTFLPHKLCASACWTPKVKNRITL 299
Query: 230 MSQSSTGKKTEFITFDLTTKKTGGQTVIQAYEIASFQVAAHLKCPIWMGASDGYMIVFTS 289
MSQSSTGKKTEFITFDLTTKKTGGQTVIQAYEIASFQVAAHLKCPIWMGASDGYMIVFTS
Sbjct: 300 MSQSSTGKKTEFITFDLTTKKTGGQTVIQAYEIASFQVAAHLKCPIWMGASDGYMIVFTS 359
Query: 290 GPYLLLFSITGFLLQRFEDHQAAINNFWVDPCYVLTTSENSVHVYMWEEGGRHPYLRSCC 349
GPYLLLFSITGFLLQRFEDHQAAINNFWVDPCYVLTTSENSVHVYMWEEGGRHPYLRSCC
Sbjct: 360 GPYLLLFSITGFLLQRFEDHQAAINNFWVDPCYVLTTSENSVHVYMWEEGGRHPYLRSCC 419
Query: 350 HLENTWHDHTTDSCISSVMCDNASIVLRVRKVSDSSILVMYSLNT 394
HLENTWHDHTTDSCISSVMCDNASIVLRVRKVSDSSILVMYSLNT
Sbjct: 420 HLENTWHDHTTDSCISSVMCDNASIVLRVRKVSDSSILVMYSLNT 464
>gi|229576906 F-box and WD repeat domain containing 12 isoform 3
[Homo sapiens]
Length = 445
Score = 692 bits (1787), Expect = 0.0
Identities = 353/436 (80%), Positives = 358/436 (82%), Gaps = 72/436 (16%)
Query: 30 KHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHTWKQFFLHQRRKELRLALAQPHNFIY 89
KHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHTWKQFFLHQRRKELRLALAQPHNFIY
Sbjct: 11 KHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHTWKQFFLHQRRKELRLALAQPHNFIY 70
Query: 90 KVTKNIAFETELAYLSGNRLTVDE--------------------QEKSIICSVSPKQE-- 127
KVTKNIAFETELAYLSGNRLTVDE QE ++I S SP QE
Sbjct: 71 KVTKNIAFETELAYLSGNRLTVDEQEKSIICSVSPKQELCAWDVQEGTMIWS-SPVQEFH 129
Query: 128 ---------------------LCAWDVQE----------------------------VGD 138
+ W+ Q+ VGD
Sbjct: 130 FSNLVTLPQMHLAITMDRKKTIKVWNCQDRDALAVLPMPQPCYCMEAYLTKDGPFLMVGD 189
Query: 139 AAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRP 198
AAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRP
Sbjct: 190 AAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRP 249
Query: 199 SEGSVPLSTFLPHKLCASACWTPKVKNRITLMSQSSTGKKTEFITFDLTTKKTGGQTVIQ 258
SEGSVPLSTFLPHKLCASACWTPKVKNRITLMSQSSTGKKTEFITFDLTTKKTGGQTVIQ
Sbjct: 250 SEGSVPLSTFLPHKLCASACWTPKVKNRITLMSQSSTGKKTEFITFDLTTKKTGGQTVIQ 309
Query: 259 AYEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDHQAAINNFWV 318
AYEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDHQAAINNFWV
Sbjct: 310 AYEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDHQAAINNFWV 369
Query: 319 DPCYVLTTSENSVHVYMWEEGGRHPYLRSCCHLENTWHDHTTDSCISSVMCDNASIVLRV 378
DPCYVLTTSENSVHVYMWEEGGRHPYLRSCCHLENTWHDHTTDSCISSVMCDNASIVLRV
Sbjct: 370 DPCYVLTTSENSVHVYMWEEGGRHPYLRSCCHLENTWHDHTTDSCISSVMCDNASIVLRV 429
Query: 379 RKVSDSSILVMYSLNT 394
RKVSDSSILVMYSLNT
Sbjct: 430 RKVSDSSILVMYSLNT 445
>gi|8923179 F-box and leucine-rich repeat protein 12 [Homo
sapiens]
Length = 326
Score = 40.8 bits (94), Expect = 0.002
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 3 IRLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSL 47
+ LPD L IFS+L + +++S+V W R+ D +LWR + L
Sbjct: 5 VELPDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDDRWLWRHVDL 49
>gi|27312027 F-box only protein 16 [Homo sapiens]
Length = 292
Score = 40.4 bits (93), Expect = 0.003
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 4 RLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTH 63
+LP + IFSFLD L + +QV HW +A+ D LW L+ NF+
Sbjct: 91 KLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLWMLKCLRFNWYINFSPTPFEQG 150
Query: 64 TWKQFFLHQRRKELRL 79
WK+ ++ Q KEL +
Sbjct: 151 IWKKHYI-QMVKELHI 165
>gi|16306595 S-phase kinase-associated protein 2 isoform 1 [Homo
sapiens]
Length = 424
Score = 39.3 bits (90), Expect = 0.006
Identities = 22/43 (51%), Positives = 27/43 (62%)
Query: 5 LPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSL 47
LPD L IFS L L LL+VS V K W R+A + LW++L L
Sbjct: 100 LPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDL 142
>gi|14249170 S-phase kinase-associated protein 2 isoform 2 [Homo
sapiens]
Length = 410
Score = 39.3 bits (90), Expect = 0.006
Identities = 22/43 (51%), Positives = 27/43 (62%)
Query: 5 LPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSL 47
LPD L IFS L L LL+VS V K W R+A + LW++L L
Sbjct: 100 LPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDL 142
>gi|16306582 F-box and leucine-rich repeat protein 2 [Homo
sapiens]
Length = 423
Score = 38.1 bits (87), Expect = 0.014
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 4 RLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSL 47
+LP L RIFSFLD+ L + +Q++K WN +A W+ + L
Sbjct: 14 KLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDL 57
>gi|27734755 F-box and leucine-rich repeat protein 20 [Homo
sapiens]
Length = 436
Score = 37.0 bits (84), Expect = 0.031
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 4 RLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSL 47
+LP L RIFSFLD+ L + +QV++ WN +A W+ + L
Sbjct: 27 KLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDL 70
>gi|30795121 F-box and WD repeat domain containing 8 isoform 2 [Homo
sapiens]
Length = 532
Score = 35.8 bits (81), Expect = 0.069
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 2 EIRLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHLG 61
+I+LP IF +LD L + +QV+K W IA+ + LW L Q + + +
Sbjct: 50 DIQLPYELAINIFQYLDRKELGRCAQVSKTWKVIAEDEVLWYRLCQQE---GHLPDSSIS 106
Query: 62 THT-WKQFFLHQRRKE 76
++ WK F R KE
Sbjct: 107 DYSCWKLIFQECRAKE 122
>gi|30795123 F-box and WD repeat domain containing 8 isoform 1 [Homo
sapiens]
Length = 598
Score = 35.8 bits (81), Expect = 0.069
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 2 EIRLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHLG 61
+I+LP IF +LD L + +QV+K W IA+ + LW L Q + + +
Sbjct: 116 DIQLPYELAINIFQYLDRKELGRCAQVSKTWKVIAEDEVLWYRLCQQE---GHLPDSSIS 172
Query: 62 THT-WKQFFLHQRRKE 76
++ WK F R KE
Sbjct: 173 DYSCWKLIFQECRAKE 188
>gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens]
Length = 491
Score = 35.4 bits (80), Expect = 0.090
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 4 RLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSL 47
RLPD ++ +IFSFL L + ++V + W +A LWR++ L
Sbjct: 116 RLPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLWRTIRL 159
>gi|157743247 F-box protein 45 [Homo sapiens]
Length = 286
Score = 35.0 bits (79), Expect = 0.12
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 4 RLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSD---YLWRSL 45
RLP L+ +FS+L+L L + V KHW R D +WRSL
Sbjct: 38 RLPSRVLELVFSYLELSELRSCALVCKHWYRCLHGDENSEVWRSL 82
>gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [Homo
sapiens]
Length = 565
Score = 32.0 bits (71), Expect = 1.00
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 5 LPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRW 50
LP + IFS+L+ L + SQV+ W+++ + LW+ L W
Sbjct: 82 LPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHLYPVHW 127
>gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [Homo
sapiens]
Length = 691
Score = 32.0 bits (71), Expect = 1.00
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 5 LPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRW 50
LP + IFS+L+ L + SQV+ W+++ + LW+ L W
Sbjct: 208 LPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHLYPVHW 253
>gi|161333854 F-box and leucine-rich repeat protein 13 isoform 2
[Homo sapiens]
Length = 690
Score = 31.6 bits (70), Expect = 1.3
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 5 LPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHT 64
LP+ A+ +IF +L L ++ QVN W + + LW ++ N T
Sbjct: 158 LPERAILQIFFYLSLKDVIICGQVNHAWMLMTQLNSLWNAIDFS--SVKNVIPDKYIVST 215
Query: 65 WKQFFLHQRRKELRLALAQPHNF 87
+++ L+ R R L +P F
Sbjct: 216 LQRWRLNVLRLNFRGCLLRPKTF 238
>gi|161333852 F-box and leucine-rich repeat protein 13 isoform 1
[Homo sapiens]
Length = 735
Score = 31.6 bits (70), Expect = 1.3
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 5 LPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHT 64
LP+ A+ +IF +L L ++ QVN W + + LW ++ N T
Sbjct: 158 LPERAILQIFFYLSLKDVIICGQVNHAWMLMTQLNSLWNAIDFS--SVKNVIPDKYIVST 215
Query: 65 WKQFFLHQRRKELRLALAQPHNF 87
+++ L+ R R L +P F
Sbjct: 216 LQRWRLNVLRLNFRGCLLRPKTF 238
>gi|111185922 F-box protein 36 [Homo sapiens]
Length = 188
Score = 31.6 bits (70), Expect = 1.3
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 4 RLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTH 63
RL D L I S+LDL + ++ Q + + ++ SD LW + D + L
Sbjct: 96 RLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAED 155
Query: 64 T-WKQFFLH---QRRKELR 78
T W+Q F Q +++LR
Sbjct: 156 TGWRQLFFTNKLQLQRQLR 174
>gi|11545739 F-box and WD repeat domain containing 4 [Homo
sapiens]
Length = 412
Score = 31.6 bits (70), Expect = 1.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 RLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLS 46
RLP+ L I S+LD+ L +++QV + R D LWR ++
Sbjct: 30 RLPEELLLLICSYLDMRALGRLAQVCRWLRRFTSCDLLWRRIA 72
>gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [Homo
sapiens]
Length = 589
Score = 31.2 bits (69), Expect = 1.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 5 LPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWR 43
LP + SFL+ LLQ +Q ++W +A+ + LWR
Sbjct: 166 LPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWR 204
>gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [Homo
sapiens]
Length = 707
Score = 31.2 bits (69), Expect = 1.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 5 LPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWR 43
LP + SFL+ LLQ +Q ++W +A+ + LWR
Sbjct: 284 LPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWR 322
>gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [Homo
sapiens]
Length = 627
Score = 31.2 bits (69), Expect = 1.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 5 LPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWR 43
LP + SFL+ LLQ +Q ++W +A+ + LWR
Sbjct: 204 LPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWR 242
>gi|24308129 F-box and WD repeat domain containing 5 [Homo
sapiens]
Length = 566
Score = 31.2 bits (69), Expect = 1.7
Identities = 15/65 (23%), Positives = 29/65 (44%)
Query: 5 LPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHT 64
LPD + +IF L +L V + W ++ ++LWR + + + +H +
Sbjct: 9 LPDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWREQFYRYYQVARDVPRHPAAMS 68
Query: 65 WKQFF 69
W + F
Sbjct: 69 WYEEF 73
>gi|193211598 pleckstrin homology domain containing, family G (with
RhoGef domain) member 4 isoform 1 [Homo sapiens]
Length = 1191
Score = 30.8 bits (68), Expect = 2.2
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 126 QELCAWDVQEVGDAAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRT 185
Q+LC W++ G A TLPG RDV Q VLL C+ W+ + +
Sbjct: 183 QDLC-WELLASGMA-------TLPGTRDV------QGRAVLLLCAHSPAWLQSECSSQEL 228
Query: 186 LPQVFLTESLLRPSEGSVPLSTFLPHKLCA 215
+ + S+ RP ++ L+ + ++CA
Sbjct: 229 IRLLLYLRSIPRPEVQALGLTVLVDARICA 258
>gi|193211596 pleckstrin homology domain containing, family G (with
RhoGef domain) member 4 isoform 1 [Homo sapiens]
Length = 1191
Score = 30.8 bits (68), Expect = 2.2
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 126 QELCAWDVQEVGDAAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRT 185
Q+LC W++ G A TLPG RDV Q VLL C+ W+ + +
Sbjct: 183 QDLC-WELLASGMA-------TLPGTRDV------QGRAVLLLCAHSPAWLQSECSSQEL 228
Query: 186 LPQVFLTESLLRPSEGSVPLSTFLPHKLCA 215
+ + S+ RP ++ L+ + ++CA
Sbjct: 229 IRLLLYLRSIPRPEVQALGLTVLVDARICA 258
>gi|193211594 pleckstrin homology domain containing, family G (with
RhoGef domain) member 4 isoform 1 [Homo sapiens]
Length = 1191
Score = 30.8 bits (68), Expect = 2.2
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 126 QELCAWDVQEVGDAAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRT 185
Q+LC W++ G A TLPG RDV Q VLL C+ W+ + +
Sbjct: 183 QDLC-WELLASGMA-------TLPGTRDV------QGRAVLLLCAHSPAWLQSECSSQEL 228
Query: 186 LPQVFLTESLLRPSEGSVPLSTFLPHKLCA 215
+ + S+ RP ++ L+ + ++CA
Sbjct: 229 IRLLLYLRSIPRPEVQALGLTVLVDARICA 258
>gi|55742734 pleckstrin homology domain containing, family G (with
RhoGef domain) member 4 isoform 1 [Homo sapiens]
Length = 1191
Score = 30.8 bits (68), Expect = 2.2
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 126 QELCAWDVQEVGDAAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRT 185
Q+LC W++ G A TLPG RDV Q VLL C+ W+ + +
Sbjct: 183 QDLC-WELLASGMA-------TLPGTRDV------QGRAVLLLCAHSPAWLQSECSSQEL 228
Query: 186 LPQVFLTESLLRPSEGSVPLSTFLPHKLCA 215
+ + S+ RP ++ L+ + ++CA
Sbjct: 229 IRLLLYLRSIPRPEVQALGLTVLVDARICA 258
>gi|72198346 B-cell lymphoma protein 2 beta isoform [Homo sapiens]
Length = 205
Score = 30.4 bits (67), Expect = 2.9
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 11/56 (19%)
Query: 12 RIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHTWKQ 67
RI +F + G++ V VN+ + + D+ LW + + N+HL HTW Q
Sbjct: 146 RIVAFFEFGGVMCVESVNREMSPLVDNIALW---------MTEYLNRHL--HTWIQ 190
>gi|72198189 B-cell lymphoma protein 2 alpha isoform [Homo sapiens]
Length = 239
Score = 30.4 bits (67), Expect = 2.9
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 11/56 (19%)
Query: 12 RIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHTWKQ 67
RI +F + G++ V VN+ + + D+ LW + + N+HL HTW Q
Sbjct: 146 RIVAFFEFGGVMCVESVNREMSPLVDNIALW---------MTEYLNRHL--HTWIQ 190
>gi|39812106 tumor differentially expressed protein 1 [Homo sapiens]
Length = 473
Score = 30.4 bits (67), Expect = 2.9
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 260 YEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDHQAAINN-FW 317
++I + A C + +G Y I F + +FS+ F ++ +D +AA++N FW
Sbjct: 76 FKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDLRAAVHNGFW 134
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.135 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,680,806
Number of Sequences: 37866
Number of extensions: 621770
Number of successful extensions: 1752
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1716
Number of HSP's gapped (non-prelim): 49
length of query: 394
length of database: 18,247,518
effective HSP length: 104
effective length of query: 290
effective length of database: 14,309,454
effective search space: 4149741660
effective search space used: 4149741660
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.