BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|22907039 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C [Homo sapiens] (190 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|22907039 apolipoprotein B mRNA editing enzyme, catalytic poly... 417 e-117 gi|22907044 apolipoprotein B mRNA editing enzyme, catalytic poly... 323 4e-89 gi|187608816 apolipoprotein B mRNA editing enzyme, catalytic pol... 311 2e-85 gi|22907025 apolipoprotein B mRNA editing enzyme, catalytic poly... 210 7e-55 gi|13399304 apolipoprotein B mRNA editing enzyme, catalytic poly... 152 2e-37 gi|10190700 activation-induced cytidine deaminase [Homo sapiens] 144 5e-35 gi|21955158 phorbolin 1 [Homo sapiens] 118 3e-27 gi|5802978 apolipoprotein B mRNA editing enzyme, catalytic polyp... 110 6e-25 gi|33147089 apolipoprotein B mRNA editing enzyme, catalytic poly... 107 8e-24 gi|61743957 apolipoprotein B mRNA editing enzyme [Homo sapiens] 83 2e-16 gi|54873619 apolipoprotein B mRNA editing enzyme, catalytic poly... 39 0.004 gi|38201667 inhibitor of growth family, member 1 isoform A [Homo... 28 3.6 gi|38201665 inhibitor of growth family, member 1 isoform B [Homo... 28 3.6 gi|38201663 inhibitor of growth family, member 1 isoform C [Homo... 28 3.6 gi|38201661 inhibitor of growth family, member 1 isoform D [Homo... 28 3.6 gi|4504695 inhibitor of growth family, member 2 [Homo sapiens] 28 4.8 gi|105990535 coagulation factor V precursor [Homo sapiens] 28 6.2 >gi|22907039 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C [Homo sapiens] Length = 190 Score = 417 bits (1072), Expect = e-117 Identities = 190/190 (100%), Positives = 190/190 (100%) Query: 1 MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60 MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD Sbjct: 1 MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60 Query: 61 SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT 120 SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT Sbjct: 61 SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT 120 Query: 121 ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL 180 ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL Sbjct: 121 ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL 180 Query: 181 LKRRLRESLQ 190 LKRRLRESLQ Sbjct: 181 LKRRLRESLQ 190 >gi|22907044 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F isoform a [Homo sapiens] Length = 373 Score = 323 bits (829), Expect = 4e-89 Identities = 147/186 (79%), Positives = 161/186 (86%) Query: 5 IRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVDSETH 64 +RNPM+AMYP FYF FKNL +A RNE+WLCFT+E +K S VSWK GVFRNQVD ETH Sbjct: 188 LRNPMEAMYPHIFYFHFKNLRKAYGRNESWLCFTMEVVKHHSPVSWKRGVFRNQVDPETH 247 Query: 65 CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLY 124 CHAERCFLSWFCDDILSPNT Y+VTWYTSWSPCP+CAGEVAEFLARHSNVNLTIFTARLY Sbjct: 248 CHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLY 307 Query: 125 YFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRLLKRR 184 YF YQEGLRSLSQEG +VEIM Y+DFKYCWENFVYND+EPFKPWKGLK NF L + Sbjct: 308 YFWDTDYQEGLRSLSQEGASVEIMGYKDFKYCWENFVYNDDEPFKPWKGLKYNFLFLDSK 367 Query: 185 LRESLQ 190 L+E L+ Sbjct: 368 LQEILE 373 Score = 185 bits (470), Expect = 2e-47 Identities = 90/190 (47%), Positives = 115/190 (60%), Gaps = 1/190 (0%) Query: 1 MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60 M P RN ++ MY TF + F N + RN WLC+ V+ K S +FR QV Sbjct: 1 MKPHFRNTVERMYRDTFSYNFYNRPILSRRNTVWLCYEVK-TKGPSRPRLDAKIFRGQVY 59 Query: 61 SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT 120 S+ HAE CFLSWFC + L +Q+TW+ SW+PCPDC ++AEFLA H NV LTI Sbjct: 60 SQPEHHAEMCFLSWFCGNQLPAYKCFQITWFVSWTPCPDCVAKLAEFLAEHPNVTLTISA 119 Query: 121 ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL 180 ARLYY+ Y+ L LSQ G V+IMD E+F YCWENFVY++ +PF PW N+ Sbjct: 120 ARLYYYWERDYRRALCRLSQAGARVKIMDDEEFAYCWENFVYSEGQPFMPWYKFDDNYAF 179 Query: 181 LKRRLRESLQ 190 L R L+E L+ Sbjct: 180 LHRTLKEILR 189 >gi|187608816 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D [Homo sapiens] Length = 386 Score = 311 bits (797), Expect = 2e-85 Identities = 145/186 (77%), Positives = 159/186 (85%) Query: 5 IRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVDSETH 64 +RNPM+AMYP FYF FKNL +A RNE+WLCFT+E K S V K GVFRNQVD ETH Sbjct: 201 LRNPMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVFRKRGVFRNQVDPETH 260 Query: 65 CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLY 124 CHAERCFLSWFCDDILSPNT Y+VTWYTSWSPCP+CAGEVAEFLARHSNVNLTIFTARL Sbjct: 261 CHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLC 320 Query: 125 YFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRLLKRR 184 YF YQEGL SLSQEG +V+IM Y+DF CW+NFVY+D+EPFKPWKGL+TNFRLLKRR Sbjct: 321 YFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNFRLLKRR 380 Query: 185 LRESLQ 190 LRE LQ Sbjct: 381 LREILQ 386 Score = 190 bits (483), Expect = 6e-49 Identities = 95/202 (47%), Positives = 122/202 (60%), Gaps = 12/202 (5%) Query: 1 MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60 MNPQIRNPM+ MY TFY F+N R+ TWLC+ V+ + RS + W TGVFR V Sbjct: 1 MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVL 60 Query: 61 SETHC------------HAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFL 108 + HAE CFLSWFC + L N ++Q+TW+ SW+PC C +V +FL Sbjct: 61 PKRQSNHRQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFL 120 Query: 109 ARHSNVNLTIFTARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPF 168 A H NV LTI ARLYY++ ++ L L + G V+IMDYEDF YCWENFV N+ +PF Sbjct: 121 AEHPNVTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPF 180 Query: 169 KPWKGLKTNFRLLKRRLRESLQ 190 PW N+ L R L+E L+ Sbjct: 181 MPWYKFDDNYASLHRTLKEILR 202 >gi|22907025 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B [Homo sapiens] Length = 382 Score = 210 bits (534), Expect = 7e-55 Identities = 99/190 (52%), Positives = 123/190 (64%) Query: 1 MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60 MNPQIRNPM+ MY TFY F+N R+ TWLC+ V+ + RS + W TGVFR QV Sbjct: 1 MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGQVY 60 Query: 61 SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT 120 + HAE CFLSWFC + L +Q+TW+ SW+PCPDC ++AEFL+ H NV LTI Sbjct: 61 FKPQYHAEMCFLSWFCGNQLPAYKCFQITWFVSWTPCPDCVAKLAEFLSEHPNVTLTISA 120 Query: 121 ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL 180 ARLYY+ Y+ L LSQ G V IMDYE+F YCWENFVYN+ + F PW N+ Sbjct: 121 ARLYYYWERDYRRALCRLSQAGARVTIMDYEEFAYCWENFVYNEGQQFMPWYKFDENYAF 180 Query: 181 LKRRLRESLQ 190 L R L+E L+ Sbjct: 181 LHRTLKEILR 190 Score = 125 bits (314), Expect = 2e-29 Identities = 74/187 (39%), Positives = 99/187 (52%), Gaps = 9/187 (4%) Query: 12 MYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVV------SWKTGVFRNQVDSETHC 65 M P TF F F N R +T+LC+ VE + + V + +N + Sbjct: 193 MDPDTFTFNFNNDPLVLRRRQTYLCYEVERLDNGTWVLMDQHMGFLCNEAKNLLCGFYGR 252 Query: 66 HAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPD--CAGEVAEFLARHSNVNLTIFTARL 123 HAE FL L P Y+VTW+ SWSPC CAGEV FL +++V L IF AR+ Sbjct: 253 HAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARI 312 Query: 124 YYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRLLKR 183 Y + P Y+E L+ L G V IM Y++F+YCW+ FVY PF+PW GL+ + + L Sbjct: 313 YDYD-PLYKEALQMLRDAGAQVSIMTYDEFEYCWDTFVYRQGCPFQPWDGLEEHSQALSG 371 Query: 184 RLRESLQ 190 RLR LQ Sbjct: 372 RLRAILQ 378 >gi|13399304 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G [Homo sapiens] Length = 384 Score = 152 bits (383), Expect = 2e-37 Identities = 84/195 (43%), Positives = 108/195 (55%), Gaps = 6/195 (3%) Query: 1 MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60 M P RN ++ MY TF + F N + RN WLC+ V+ K S +FR QV Sbjct: 1 MKPHFRNTVERMYRDTFSYNFYNRPILSRRNTVWLCYEVK-TKGPSRPPLDAKIFRGQVY 59 Query: 61 SETHCHAERCFLSWFCD-DILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIF 119 SE H E F WF L + +Y+VTWY SWSPC C ++A FLA V LTIF Sbjct: 60 SELKYHPEMRFFHWFSKWRKLHRDQEYEVTWYISWSPCTKCTRDMATFLAEDPKVTLTIF 119 Query: 120 TARLYYFQYPCYQEGLRSLSQE----GVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLK 175 ARLYYF P YQE LRSL Q+ ++IM+Y++F++CW FVY+ E F+PW L Sbjct: 120 VARLYYFWDPDYQEALRSLCQKRDGPRATMKIMNYDEFQHCWSKFVYSQRELFEPWNNLP 179 Query: 176 TNFRLLKRRLRESLQ 190 + LL L E L+ Sbjct: 180 KYYILLHIMLGEILR 194 Score = 133 bits (335), Expect = 8e-32 Identities = 76/186 (40%), Positives = 110/186 (59%), Gaps = 7/186 (3%) Query: 11 AMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRS--VVSWKTGVFRNQVDSETHC--- 65 +M P TF F F N R+ET+LC+ VE + + +++ + G NQ + Sbjct: 196 SMDPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVLLNQRRGFLCNQAPHKHGFLEG 255 Query: 66 -HAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLY 124 HAE CFL L + Y+VT +TSWSPC CA E+A+F++++ +V+L IFTAR+Y Sbjct: 256 RHAELCFLDVIPFWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIFTARIY 315 Query: 125 YFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRLLKRR 184 Q C QEGLR+L++ G + IM Y +FK+CW+ FV + PF+PW GL + + L R Sbjct: 316 DDQGRC-QEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGCPFQPWDGLDEHSQDLSGR 374 Query: 185 LRESLQ 190 LR LQ Sbjct: 375 LRAILQ 380 >gi|10190700 activation-induced cytidine deaminase [Homo sapiens] Length = 198 Score = 144 bits (363), Expect = 5e-35 Identities = 77/174 (44%), Positives = 100/174 (57%), Gaps = 5/174 (2%) Query: 17 FYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVDSETHCHAERCFLSWFC 76 F +QFKN+ A R ET+LC+ V+ + S G RN+ CH E FL + Sbjct: 11 FLYQFKNVRWAKGRRETYLCYVVKRRDSATSFSLDFGYLRNK----NGCHVELLFLRYIS 66 Query: 77 DDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLYYFQ-YPCYQEGL 135 D L P Y+VTW+TSWSPC DCA VA+FL + N++L IFTARLY+ + EGL Sbjct: 67 DWDLDPGRCYRVTWFTSWSPCYDCARHVADFLRGNPNLSLRIFTARLYFCEDRKAEPEGL 126 Query: 136 RSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRLLKRRLRESL 189 R L + GV + IM ++D+ YCW FV N FK W+GL N L R+LR L Sbjct: 127 RRLHRAGVQIAIMTFKDYFYCWNTFVENHERTFKAWEGLHENSVRLSRQLRRIL 180 >gi|21955158 phorbolin 1 [Homo sapiens] Length = 199 Score = 118 bits (296), Expect = 3e-27 Identities = 75/192 (39%), Positives = 99/192 (51%), Gaps = 14/192 (7%) Query: 8 PMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKT--GVFRNQVDSETHC 65 P M P F F N R++T+LC+ VE + + V G NQ + C Sbjct: 9 PRHLMDPHIFTSNFNN---GIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLL-C 64 Query: 66 -----HAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPD--CAGEVAEFLARHSNVNLTI 118 HAE FL L P Y+VTW+ SWSPC CAGEV FL +++V L I Sbjct: 65 GFYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRI 124 Query: 119 FTARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNF 178 F AR+Y + P Y+E L+ L G V IM Y++FK+CW+ FV + PF+PW GL + Sbjct: 125 FAARIYDYD-PLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLDEHS 183 Query: 179 RLLKRRLRESLQ 190 + L RLR LQ Sbjct: 184 QALSGRLRAILQ 195 >gi|5802978 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2 [Homo sapiens] Length = 224 Score = 110 bits (276), Expect = 6e-25 Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 7/177 (3%) Query: 17 FYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVDSETHCHAERCFLSWFC 76 F FQF+N+ ++ RN+T+LC+ VE + V G D HAE F + Sbjct: 52 FKFQFRNVEYSSGRNKTFLCYVVEAQGKGGQVQASRGYLE---DEHAAAHAEEAFFNTIL 108 Query: 77 DDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLYYFQYPCYQEGLR 136 P +Y VTWY S SPC CA + + L++ N+ L I RL+ ++ P Q L+ Sbjct: 109 P-AFDPALRYNVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLFMWEEPEIQAALK 167 Query: 137 SLSQEGVAVEIMDYEDFKYCWENFV---YNDNEPFKPWKGLKTNFRLLKRRLRESLQ 190 L + G + IM +DF+Y W+NFV +++ F+PW+ ++ NF + +L + L+ Sbjct: 168 KLKEAGCKLRIMKPQDFEYVWQNFVEQEEGESKAFQPWEDIQENFLYYEEKLADILK 224 >gi|33147089 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H [Homo sapiens] Length = 183 Score = 107 bits (266), Expect = 8e-24 Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 4/139 (2%) Query: 56 RNQVDSETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVN 115 R +++ CHAE CF++ L YQVT Y +WSPC CA E+ +F+ H ++N Sbjct: 44 RGYFENKKKCHAEICFINEIKSMGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAHDHLN 103 Query: 116 LTIFTARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDN----EPFKPW 171 L IF +RLYY Q+GLR L V VE+M + +F CWENFV ++ P+K Sbjct: 104 LGIFASRLYYHWCKPQQKGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKML 163 Query: 172 KGLKTNFRLLKRRLRESLQ 190 + L N R +KRRL Q Sbjct: 164 EELDKNSRAIKRRLERIKQ 182 >gi|61743957 apolipoprotein B mRNA editing enzyme [Homo sapiens] Length = 236 Score = 82.8 bits (203), Expect = 2e-16 Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 1/97 (1%) Query: 66 HAERCFLSWFCDDI-LSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLY 124 H E F+ F + P+ +TW+ SWSPC +C+ + EFL+RH V L I+ ARL+ Sbjct: 61 HVEVNFIKKFTSERDFHPSMSCSITWFLSWSPCWECSQAIREFLSRHPGVTLVIYVARLF 120 Query: 125 YFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFV 161 + ++GLR L GV ++IM ++ +CW NFV Sbjct: 121 WHMDQQNRQGLRDLVNSGVTIQIMRASEYYHCWRNFV 157 >gi|54873619 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F isoform b [Homo sapiens] Length = 101 Score = 38.5 bits (88), Expect = 0.004 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 1 MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQV 59 M P RN ++ MY TF + F N + RN WLC+ V+ K S +FR QV Sbjct: 1 MKPHFRNTVERMYRDTFSYNFYNRPILSRRNTVWLCYEVK-TKGPSRPRLDAKIFRGQV 58 >gi|38201667 inhibitor of growth family, member 1 isoform A [Homo sapiens] Length = 279 Score = 28.5 bits (62), Expect = 3.6 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 5/39 (12%) Query: 65 CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGE 103 C + C + WF + N K + WY CP C GE Sbjct: 226 CDNDECPIEWFHFSCVGLNHKPKGKWY-----CPKCRGE 259 >gi|38201665 inhibitor of growth family, member 1 isoform B [Homo sapiens] Length = 210 Score = 28.5 bits (62), Expect = 3.6 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 5/39 (12%) Query: 65 CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGE 103 C + C + WF + N K + WY CP C GE Sbjct: 157 CDNDECPIEWFHFSCVGLNHKPKGKWY-----CPKCRGE 190 >gi|38201663 inhibitor of growth family, member 1 isoform C [Homo sapiens] Length = 235 Score = 28.5 bits (62), Expect = 3.6 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 5/39 (12%) Query: 65 CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGE 103 C + C + WF + N K + WY CP C GE Sbjct: 182 CDNDECPIEWFHFSCVGLNHKPKGKWY-----CPKCRGE 215 >gi|38201661 inhibitor of growth family, member 1 isoform D [Homo sapiens] Length = 422 Score = 28.5 bits (62), Expect = 3.6 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 5/39 (12%) Query: 65 CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGE 103 C + C + WF + N K + WY CP C GE Sbjct: 369 CDNDECPIEWFHFSCVGLNHKPKGKWY-----CPKCRGE 402 >gi|4504695 inhibitor of growth family, member 2 [Homo sapiens] Length = 280 Score = 28.1 bits (61), Expect = 4.8 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 5/39 (12%) Query: 65 CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGE 103 C E+C + WF +S K + WY CP C G+ Sbjct: 228 CDNEQCPIEWFHFSCVSLTYKPKGKWY-----CPKCRGD 261 >gi|105990535 coagulation factor V precursor [Homo sapiens] Length = 2224 Score = 27.7 bits (60), Expect = 6.2 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%) Query: 74 WFCDD-ILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVN 115 WF +D + PN+ Y W+ + P+ G A +S VN Sbjct: 1693 WFKEDNAVQPNSSYTYVWHATERSGPESPGSACRAWAYYSAVN 1735 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.324 0.137 0.468 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,593,960 Number of Sequences: 37866 Number of extensions: 307605 Number of successful extensions: 832 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 800 Number of HSP's gapped (non-prelim): 21 length of query: 190 length of database: 18,247,518 effective HSP length: 96 effective length of query: 94 effective length of database: 14,612,382 effective search space: 1373563908 effective search space used: 1373563908 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.