Guide to the Human Genome
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Search of human proteins with 22907039

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|22907039 apolipoprotein B mRNA editing enzyme, catalytic
polypeptide-like 3C [Homo sapiens]
         (190 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22907039 apolipoprotein B mRNA editing enzyme, catalytic poly...   417   e-117
gi|22907044 apolipoprotein B mRNA editing enzyme, catalytic poly...   323   4e-89
gi|187608816 apolipoprotein B mRNA editing enzyme, catalytic pol...   311   2e-85
gi|22907025 apolipoprotein B mRNA editing enzyme, catalytic poly...   210   7e-55
gi|13399304 apolipoprotein B mRNA editing enzyme, catalytic poly...   152   2e-37
gi|10190700 activation-induced cytidine deaminase [Homo sapiens]      144   5e-35
gi|21955158 phorbolin 1 [Homo sapiens]                                118   3e-27
gi|5802978 apolipoprotein B mRNA editing enzyme, catalytic polyp...   110   6e-25
gi|33147089 apolipoprotein B mRNA editing enzyme, catalytic poly...   107   8e-24
gi|61743957 apolipoprotein B mRNA editing enzyme [Homo sapiens]        83   2e-16
gi|54873619 apolipoprotein B mRNA editing enzyme, catalytic poly...    39   0.004
gi|38201667 inhibitor of growth family, member 1 isoform A [Homo...    28   3.6  
gi|38201665 inhibitor of growth family, member 1 isoform B [Homo...    28   3.6  
gi|38201663 inhibitor of growth family, member 1 isoform C [Homo...    28   3.6  
gi|38201661 inhibitor of growth family, member 1 isoform D [Homo...    28   3.6  
gi|4504695 inhibitor of growth family, member 2 [Homo sapiens]         28   4.8  
gi|105990535 coagulation factor V precursor [Homo sapiens]             28   6.2  

>gi|22907039 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3C [Homo sapiens]
          Length = 190

 Score =  417 bits (1072), Expect = e-117
 Identities = 190/190 (100%), Positives = 190/190 (100%)

Query: 1   MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60
           MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD
Sbjct: 1   MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60

Query: 61  SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT 120
           SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT
Sbjct: 61  SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT 120

Query: 121 ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL 180
           ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL
Sbjct: 121 ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL 180

Query: 181 LKRRLRESLQ 190
           LKRRLRESLQ
Sbjct: 181 LKRRLRESLQ 190


>gi|22907044 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3F isoform a [Homo sapiens]
          Length = 373

 Score =  323 bits (829), Expect = 4e-89
 Identities = 147/186 (79%), Positives = 161/186 (86%)

Query: 5   IRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVDSETH 64
           +RNPM+AMYP  FYF FKNL +A  RNE+WLCFT+E +K  S VSWK GVFRNQVD ETH
Sbjct: 188 LRNPMEAMYPHIFYFHFKNLRKAYGRNESWLCFTMEVVKHHSPVSWKRGVFRNQVDPETH 247

Query: 65  CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLY 124
           CHAERCFLSWFCDDILSPNT Y+VTWYTSWSPCP+CAGEVAEFLARHSNVNLTIFTARLY
Sbjct: 248 CHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLY 307

Query: 125 YFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRLLKRR 184
           YF    YQEGLRSLSQEG +VEIM Y+DFKYCWENFVYND+EPFKPWKGLK NF  L  +
Sbjct: 308 YFWDTDYQEGLRSLSQEGASVEIMGYKDFKYCWENFVYNDDEPFKPWKGLKYNFLFLDSK 367

Query: 185 LRESLQ 190
           L+E L+
Sbjct: 368 LQEILE 373



 Score =  185 bits (470), Expect = 2e-47
 Identities = 90/190 (47%), Positives = 115/190 (60%), Gaps = 1/190 (0%)

Query: 1   MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60
           M P  RN ++ MY  TF + F N    + RN  WLC+ V+  K  S       +FR QV 
Sbjct: 1   MKPHFRNTVERMYRDTFSYNFYNRPILSRRNTVWLCYEVK-TKGPSRPRLDAKIFRGQVY 59

Query: 61  SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT 120
           S+   HAE CFLSWFC + L     +Q+TW+ SW+PCPDC  ++AEFLA H NV LTI  
Sbjct: 60  SQPEHHAEMCFLSWFCGNQLPAYKCFQITWFVSWTPCPDCVAKLAEFLAEHPNVTLTISA 119

Query: 121 ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL 180
           ARLYY+    Y+  L  LSQ G  V+IMD E+F YCWENFVY++ +PF PW     N+  
Sbjct: 120 ARLYYYWERDYRRALCRLSQAGARVKIMDDEEFAYCWENFVYSEGQPFMPWYKFDDNYAF 179

Query: 181 LKRRLRESLQ 190
           L R L+E L+
Sbjct: 180 LHRTLKEILR 189


>gi|187608816 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3D [Homo sapiens]
          Length = 386

 Score =  311 bits (797), Expect = 2e-85
 Identities = 145/186 (77%), Positives = 159/186 (85%)

Query: 5   IRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVDSETH 64
           +RNPM+AMYP  FYF FKNL +A  RNE+WLCFT+E  K  S V  K GVFRNQVD ETH
Sbjct: 201 LRNPMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVFRKRGVFRNQVDPETH 260

Query: 65  CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLY 124
           CHAERCFLSWFCDDILSPNT Y+VTWYTSWSPCP+CAGEVAEFLARHSNVNLTIFTARL 
Sbjct: 261 CHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLC 320

Query: 125 YFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRLLKRR 184
           YF    YQEGL SLSQEG +V+IM Y+DF  CW+NFVY+D+EPFKPWKGL+TNFRLLKRR
Sbjct: 321 YFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNFRLLKRR 380

Query: 185 LRESLQ 190
           LRE LQ
Sbjct: 381 LREILQ 386



 Score =  190 bits (483), Expect = 6e-49
 Identities = 95/202 (47%), Positives = 122/202 (60%), Gaps = 12/202 (5%)

Query: 1   MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60
           MNPQIRNPM+ MY  TFY  F+N      R+ TWLC+ V+  + RS + W TGVFR  V 
Sbjct: 1   MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVL 60

Query: 61  SETHC------------HAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFL 108
            +               HAE CFLSWFC + L  N ++Q+TW+ SW+PC  C  +V +FL
Sbjct: 61  PKRQSNHRQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFL 120

Query: 109 ARHSNVNLTIFTARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPF 168
           A H NV LTI  ARLYY++   ++  L  L + G  V+IMDYEDF YCWENFV N+ +PF
Sbjct: 121 AEHPNVTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPF 180

Query: 169 KPWKGLKTNFRLLKRRLRESLQ 190
            PW     N+  L R L+E L+
Sbjct: 181 MPWYKFDDNYASLHRTLKEILR 202


>gi|22907025 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3B [Homo sapiens]
          Length = 382

 Score =  210 bits (534), Expect = 7e-55
 Identities = 99/190 (52%), Positives = 123/190 (64%)

Query: 1   MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60
           MNPQIRNPM+ MY  TFY  F+N      R+ TWLC+ V+  + RS + W TGVFR QV 
Sbjct: 1   MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGQVY 60

Query: 61  SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT 120
            +   HAE CFLSWFC + L     +Q+TW+ SW+PCPDC  ++AEFL+ H NV LTI  
Sbjct: 61  FKPQYHAEMCFLSWFCGNQLPAYKCFQITWFVSWTPCPDCVAKLAEFLSEHPNVTLTISA 120

Query: 121 ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL 180
           ARLYY+    Y+  L  LSQ G  V IMDYE+F YCWENFVYN+ + F PW     N+  
Sbjct: 121 ARLYYYWERDYRRALCRLSQAGARVTIMDYEEFAYCWENFVYNEGQQFMPWYKFDENYAF 180

Query: 181 LKRRLRESLQ 190
           L R L+E L+
Sbjct: 181 LHRTLKEILR 190



 Score =  125 bits (314), Expect = 2e-29
 Identities = 74/187 (39%), Positives = 99/187 (52%), Gaps = 9/187 (4%)

Query: 12  MYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVV------SWKTGVFRNQVDSETHC 65
           M P TF F F N      R +T+LC+ VE +   + V       +     +N +      
Sbjct: 193 MDPDTFTFNFNNDPLVLRRRQTYLCYEVERLDNGTWVLMDQHMGFLCNEAKNLLCGFYGR 252

Query: 66  HAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPD--CAGEVAEFLARHSNVNLTIFTARL 123
           HAE  FL       L P   Y+VTW+ SWSPC    CAGEV  FL  +++V L IF AR+
Sbjct: 253 HAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARI 312

Query: 124 YYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRLLKR 183
           Y +  P Y+E L+ L   G  V IM Y++F+YCW+ FVY    PF+PW GL+ + + L  
Sbjct: 313 YDYD-PLYKEALQMLRDAGAQVSIMTYDEFEYCWDTFVYRQGCPFQPWDGLEEHSQALSG 371

Query: 184 RLRESLQ 190
           RLR  LQ
Sbjct: 372 RLRAILQ 378


>gi|13399304 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3G [Homo sapiens]
          Length = 384

 Score =  152 bits (383), Expect = 2e-37
 Identities = 84/195 (43%), Positives = 108/195 (55%), Gaps = 6/195 (3%)

Query: 1   MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60
           M P  RN ++ MY  TF + F N    + RN  WLC+ V+  K  S       +FR QV 
Sbjct: 1   MKPHFRNTVERMYRDTFSYNFYNRPILSRRNTVWLCYEVK-TKGPSRPPLDAKIFRGQVY 59

Query: 61  SETHCHAERCFLSWFCD-DILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIF 119
           SE   H E  F  WF     L  + +Y+VTWY SWSPC  C  ++A FLA    V LTIF
Sbjct: 60  SELKYHPEMRFFHWFSKWRKLHRDQEYEVTWYISWSPCTKCTRDMATFLAEDPKVTLTIF 119

Query: 120 TARLYYFQYPCYQEGLRSLSQE----GVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLK 175
            ARLYYF  P YQE LRSL Q+       ++IM+Y++F++CW  FVY+  E F+PW  L 
Sbjct: 120 VARLYYFWDPDYQEALRSLCQKRDGPRATMKIMNYDEFQHCWSKFVYSQRELFEPWNNLP 179

Query: 176 TNFRLLKRRLRESLQ 190
             + LL   L E L+
Sbjct: 180 KYYILLHIMLGEILR 194



 Score =  133 bits (335), Expect = 8e-32
 Identities = 76/186 (40%), Positives = 110/186 (59%), Gaps = 7/186 (3%)

Query: 11  AMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRS--VVSWKTGVFRNQVDSETHC--- 65
           +M P TF F F N      R+ET+LC+ VE +   +  +++ + G   NQ   +      
Sbjct: 196 SMDPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVLLNQRRGFLCNQAPHKHGFLEG 255

Query: 66  -HAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLY 124
            HAE CFL       L  +  Y+VT +TSWSPC  CA E+A+F++++ +V+L IFTAR+Y
Sbjct: 256 RHAELCFLDVIPFWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIFTARIY 315

Query: 125 YFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRLLKRR 184
             Q  C QEGLR+L++ G  + IM Y +FK+CW+ FV +   PF+PW GL  + + L  R
Sbjct: 316 DDQGRC-QEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGCPFQPWDGLDEHSQDLSGR 374

Query: 185 LRESLQ 190
           LR  LQ
Sbjct: 375 LRAILQ 380


>gi|10190700 activation-induced cytidine deaminase [Homo sapiens]
          Length = 198

 Score =  144 bits (363), Expect = 5e-35
 Identities = 77/174 (44%), Positives = 100/174 (57%), Gaps = 5/174 (2%)

Query: 17  FYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVDSETHCHAERCFLSWFC 76
           F +QFKN+  A  R ET+LC+ V+     +  S   G  RN+      CH E  FL +  
Sbjct: 11  FLYQFKNVRWAKGRRETYLCYVVKRRDSATSFSLDFGYLRNK----NGCHVELLFLRYIS 66

Query: 77  DDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLYYFQ-YPCYQEGL 135
           D  L P   Y+VTW+TSWSPC DCA  VA+FL  + N++L IFTARLY+ +      EGL
Sbjct: 67  DWDLDPGRCYRVTWFTSWSPCYDCARHVADFLRGNPNLSLRIFTARLYFCEDRKAEPEGL 126

Query: 136 RSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRLLKRRLRESL 189
           R L + GV + IM ++D+ YCW  FV N    FK W+GL  N   L R+LR  L
Sbjct: 127 RRLHRAGVQIAIMTFKDYFYCWNTFVENHERTFKAWEGLHENSVRLSRQLRRIL 180


>gi|21955158 phorbolin 1 [Homo sapiens]
          Length = 199

 Score =  118 bits (296), Expect = 3e-27
 Identities = 75/192 (39%), Positives = 99/192 (51%), Gaps = 14/192 (7%)

Query: 8   PMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKT--GVFRNQVDSETHC 65
           P   M P  F   F N      R++T+LC+ VE +   + V      G   NQ  +   C
Sbjct: 9   PRHLMDPHIFTSNFNN---GIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLL-C 64

Query: 66  -----HAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPD--CAGEVAEFLARHSNVNLTI 118
                HAE  FL       L P   Y+VTW+ SWSPC    CAGEV  FL  +++V L I
Sbjct: 65  GFYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRI 124

Query: 119 FTARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNF 178
           F AR+Y +  P Y+E L+ L   G  V IM Y++FK+CW+ FV +   PF+PW GL  + 
Sbjct: 125 FAARIYDYD-PLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLDEHS 183

Query: 179 RLLKRRLRESLQ 190
           + L  RLR  LQ
Sbjct: 184 QALSGRLRAILQ 195


>gi|5802978 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 2 [Homo sapiens]
          Length = 224

 Score =  110 bits (276), Expect = 6e-25
 Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 7/177 (3%)

Query: 17  FYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVDSETHCHAERCFLSWFC 76
           F FQF+N+  ++ RN+T+LC+ VE   +   V    G      D     HAE  F +   
Sbjct: 52  FKFQFRNVEYSSGRNKTFLCYVVEAQGKGGQVQASRGYLE---DEHAAAHAEEAFFNTIL 108

Query: 77  DDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLYYFQYPCYQEGLR 136
                P  +Y VTWY S SPC  CA  + + L++  N+ L I   RL+ ++ P  Q  L+
Sbjct: 109 P-AFDPALRYNVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLFMWEEPEIQAALK 167

Query: 137 SLSQEGVAVEIMDYEDFKYCWENFV---YNDNEPFKPWKGLKTNFRLLKRRLRESLQ 190
            L + G  + IM  +DF+Y W+NFV     +++ F+PW+ ++ NF   + +L + L+
Sbjct: 168 KLKEAGCKLRIMKPQDFEYVWQNFVEQEEGESKAFQPWEDIQENFLYYEEKLADILK 224


>gi|33147089 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3H [Homo sapiens]
          Length = 183

 Score =  107 bits (266), Expect = 8e-24
 Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 4/139 (2%)

Query: 56  RNQVDSETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVN 115
           R   +++  CHAE CF++      L     YQVT Y +WSPC  CA E+ +F+  H ++N
Sbjct: 44  RGYFENKKKCHAEICFINEIKSMGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAHDHLN 103

Query: 116 LTIFTARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDN----EPFKPW 171
           L IF +RLYY      Q+GLR L    V VE+M + +F  CWENFV ++      P+K  
Sbjct: 104 LGIFASRLYYHWCKPQQKGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKML 163

Query: 172 KGLKTNFRLLKRRLRESLQ 190
           + L  N R +KRRL    Q
Sbjct: 164 EELDKNSRAIKRRLERIKQ 182


>gi|61743957 apolipoprotein B mRNA editing enzyme [Homo sapiens]
          Length = 236

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 66  HAERCFLSWFCDDI-LSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLY 124
           H E  F+  F  +    P+    +TW+ SWSPC +C+  + EFL+RH  V L I+ ARL+
Sbjct: 61  HVEVNFIKKFTSERDFHPSMSCSITWFLSWSPCWECSQAIREFLSRHPGVTLVIYVARLF 120

Query: 125 YFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFV 161
           +      ++GLR L   GV ++IM   ++ +CW NFV
Sbjct: 121 WHMDQQNRQGLRDLVNSGVTIQIMRASEYYHCWRNFV 157


>gi|54873619 apolipoprotein B mRNA editing enzyme, catalytic
          polypeptide-like 3F isoform b [Homo sapiens]
          Length = 101

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 1  MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQV 59
          M P  RN ++ MY  TF + F N    + RN  WLC+ V+  K  S       +FR QV
Sbjct: 1  MKPHFRNTVERMYRDTFSYNFYNRPILSRRNTVWLCYEVK-TKGPSRPRLDAKIFRGQV 58


>gi|38201667 inhibitor of growth family, member 1 isoform A [Homo
           sapiens]
          Length = 279

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 5/39 (12%)

Query: 65  CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGE 103
           C  + C + WF    +  N K +  WY     CP C GE
Sbjct: 226 CDNDECPIEWFHFSCVGLNHKPKGKWY-----CPKCRGE 259


>gi|38201665 inhibitor of growth family, member 1 isoform B [Homo
           sapiens]
          Length = 210

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 5/39 (12%)

Query: 65  CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGE 103
           C  + C + WF    +  N K +  WY     CP C GE
Sbjct: 157 CDNDECPIEWFHFSCVGLNHKPKGKWY-----CPKCRGE 190


>gi|38201663 inhibitor of growth family, member 1 isoform C [Homo
           sapiens]
          Length = 235

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 5/39 (12%)

Query: 65  CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGE 103
           C  + C + WF    +  N K +  WY     CP C GE
Sbjct: 182 CDNDECPIEWFHFSCVGLNHKPKGKWY-----CPKCRGE 215


>gi|38201661 inhibitor of growth family, member 1 isoform D [Homo
           sapiens]
          Length = 422

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 5/39 (12%)

Query: 65  CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGE 103
           C  + C + WF    +  N K +  WY     CP C GE
Sbjct: 369 CDNDECPIEWFHFSCVGLNHKPKGKWY-----CPKCRGE 402


>gi|4504695 inhibitor of growth family, member 2 [Homo sapiens]
          Length = 280

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 5/39 (12%)

Query: 65  CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGE 103
           C  E+C + WF    +S   K +  WY     CP C G+
Sbjct: 228 CDNEQCPIEWFHFSCVSLTYKPKGKWY-----CPKCRGD 261


>gi|105990535 coagulation factor V precursor [Homo sapiens]
          Length = 2224

 Score = 27.7 bits (60), Expect = 6.2
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 74   WFCDD-ILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVN 115
            WF +D  + PN+ Y   W+ +    P+  G      A +S VN
Sbjct: 1693 WFKEDNAVQPNSSYTYVWHATERSGPESPGSACRAWAYYSAVN 1735


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.137    0.468 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,593,960
Number of Sequences: 37866
Number of extensions: 307605
Number of successful extensions: 832
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 800
Number of HSP's gapped (non-prelim): 21
length of query: 190
length of database: 18,247,518
effective HSP length: 96
effective length of query: 94
effective length of database: 14,612,382
effective search space: 1373563908
effective search space used: 1373563908
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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