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Search of human proteins with 22907039
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22907039 apolipoprotein B mRNA editing enzyme, catalytic
polypeptide-like 3C [Homo sapiens]
(190 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22907039 apolipoprotein B mRNA editing enzyme, catalytic poly... 417 e-117
gi|22907044 apolipoprotein B mRNA editing enzyme, catalytic poly... 323 4e-89
gi|187608816 apolipoprotein B mRNA editing enzyme, catalytic pol... 311 2e-85
gi|22907025 apolipoprotein B mRNA editing enzyme, catalytic poly... 210 7e-55
gi|13399304 apolipoprotein B mRNA editing enzyme, catalytic poly... 152 2e-37
gi|10190700 activation-induced cytidine deaminase [Homo sapiens] 144 5e-35
gi|21955158 phorbolin 1 [Homo sapiens] 118 3e-27
gi|5802978 apolipoprotein B mRNA editing enzyme, catalytic polyp... 110 6e-25
gi|33147089 apolipoprotein B mRNA editing enzyme, catalytic poly... 107 8e-24
gi|61743957 apolipoprotein B mRNA editing enzyme [Homo sapiens] 83 2e-16
gi|54873619 apolipoprotein B mRNA editing enzyme, catalytic poly... 39 0.004
gi|38201667 inhibitor of growth family, member 1 isoform A [Homo... 28 3.6
gi|38201665 inhibitor of growth family, member 1 isoform B [Homo... 28 3.6
gi|38201663 inhibitor of growth family, member 1 isoform C [Homo... 28 3.6
gi|38201661 inhibitor of growth family, member 1 isoform D [Homo... 28 3.6
gi|4504695 inhibitor of growth family, member 2 [Homo sapiens] 28 4.8
gi|105990535 coagulation factor V precursor [Homo sapiens] 28 6.2
>gi|22907039 apolipoprotein B mRNA editing enzyme, catalytic
polypeptide-like 3C [Homo sapiens]
Length = 190
Score = 417 bits (1072), Expect = e-117
Identities = 190/190 (100%), Positives = 190/190 (100%)
Query: 1 MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60
MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD
Sbjct: 1 MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60
Query: 61 SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT 120
SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT
Sbjct: 61 SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT 120
Query: 121 ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL 180
ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL
Sbjct: 121 ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL 180
Query: 181 LKRRLRESLQ 190
LKRRLRESLQ
Sbjct: 181 LKRRLRESLQ 190
>gi|22907044 apolipoprotein B mRNA editing enzyme, catalytic
polypeptide-like 3F isoform a [Homo sapiens]
Length = 373
Score = 323 bits (829), Expect = 4e-89
Identities = 147/186 (79%), Positives = 161/186 (86%)
Query: 5 IRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVDSETH 64
+RNPM+AMYP FYF FKNL +A RNE+WLCFT+E +K S VSWK GVFRNQVD ETH
Sbjct: 188 LRNPMEAMYPHIFYFHFKNLRKAYGRNESWLCFTMEVVKHHSPVSWKRGVFRNQVDPETH 247
Query: 65 CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLY 124
CHAERCFLSWFCDDILSPNT Y+VTWYTSWSPCP+CAGEVAEFLARHSNVNLTIFTARLY
Sbjct: 248 CHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLY 307
Query: 125 YFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRLLKRR 184
YF YQEGLRSLSQEG +VEIM Y+DFKYCWENFVYND+EPFKPWKGLK NF L +
Sbjct: 308 YFWDTDYQEGLRSLSQEGASVEIMGYKDFKYCWENFVYNDDEPFKPWKGLKYNFLFLDSK 367
Query: 185 LRESLQ 190
L+E L+
Sbjct: 368 LQEILE 373
Score = 185 bits (470), Expect = 2e-47
Identities = 90/190 (47%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Query: 1 MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60
M P RN ++ MY TF + F N + RN WLC+ V+ K S +FR QV
Sbjct: 1 MKPHFRNTVERMYRDTFSYNFYNRPILSRRNTVWLCYEVK-TKGPSRPRLDAKIFRGQVY 59
Query: 61 SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT 120
S+ HAE CFLSWFC + L +Q+TW+ SW+PCPDC ++AEFLA H NV LTI
Sbjct: 60 SQPEHHAEMCFLSWFCGNQLPAYKCFQITWFVSWTPCPDCVAKLAEFLAEHPNVTLTISA 119
Query: 121 ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL 180
ARLYY+ Y+ L LSQ G V+IMD E+F YCWENFVY++ +PF PW N+
Sbjct: 120 ARLYYYWERDYRRALCRLSQAGARVKIMDDEEFAYCWENFVYSEGQPFMPWYKFDDNYAF 179
Query: 181 LKRRLRESLQ 190
L R L+E L+
Sbjct: 180 LHRTLKEILR 189
>gi|187608816 apolipoprotein B mRNA editing enzyme, catalytic
polypeptide-like 3D [Homo sapiens]
Length = 386
Score = 311 bits (797), Expect = 2e-85
Identities = 145/186 (77%), Positives = 159/186 (85%)
Query: 5 IRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVDSETH 64
+RNPM+AMYP FYF FKNL +A RNE+WLCFT+E K S V K GVFRNQVD ETH
Sbjct: 201 LRNPMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVFRKRGVFRNQVDPETH 260
Query: 65 CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLY 124
CHAERCFLSWFCDDILSPNT Y+VTWYTSWSPCP+CAGEVAEFLARHSNVNLTIFTARL
Sbjct: 261 CHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLC 320
Query: 125 YFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRLLKRR 184
YF YQEGL SLSQEG +V+IM Y+DF CW+NFVY+D+EPFKPWKGL+TNFRLLKRR
Sbjct: 321 YFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNFRLLKRR 380
Query: 185 LRESLQ 190
LRE LQ
Sbjct: 381 LREILQ 386
Score = 190 bits (483), Expect = 6e-49
Identities = 95/202 (47%), Positives = 122/202 (60%), Gaps = 12/202 (5%)
Query: 1 MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60
MNPQIRNPM+ MY TFY F+N R+ TWLC+ V+ + RS + W TGVFR V
Sbjct: 1 MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVL 60
Query: 61 SETHC------------HAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFL 108
+ HAE CFLSWFC + L N ++Q+TW+ SW+PC C +V +FL
Sbjct: 61 PKRQSNHRQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFL 120
Query: 109 ARHSNVNLTIFTARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPF 168
A H NV LTI ARLYY++ ++ L L + G V+IMDYEDF YCWENFV N+ +PF
Sbjct: 121 AEHPNVTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPF 180
Query: 169 KPWKGLKTNFRLLKRRLRESLQ 190
PW N+ L R L+E L+
Sbjct: 181 MPWYKFDDNYASLHRTLKEILR 202
>gi|22907025 apolipoprotein B mRNA editing enzyme, catalytic
polypeptide-like 3B [Homo sapiens]
Length = 382
Score = 210 bits (534), Expect = 7e-55
Identities = 99/190 (52%), Positives = 123/190 (64%)
Query: 1 MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60
MNPQIRNPM+ MY TFY F+N R+ TWLC+ V+ + RS + W TGVFR QV
Sbjct: 1 MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGQVY 60
Query: 61 SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT 120
+ HAE CFLSWFC + L +Q+TW+ SW+PCPDC ++AEFL+ H NV LTI
Sbjct: 61 FKPQYHAEMCFLSWFCGNQLPAYKCFQITWFVSWTPCPDCVAKLAEFLSEHPNVTLTISA 120
Query: 121 ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL 180
ARLYY+ Y+ L LSQ G V IMDYE+F YCWENFVYN+ + F PW N+
Sbjct: 121 ARLYYYWERDYRRALCRLSQAGARVTIMDYEEFAYCWENFVYNEGQQFMPWYKFDENYAF 180
Query: 181 LKRRLRESLQ 190
L R L+E L+
Sbjct: 181 LHRTLKEILR 190
Score = 125 bits (314), Expect = 2e-29
Identities = 74/187 (39%), Positives = 99/187 (52%), Gaps = 9/187 (4%)
Query: 12 MYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVV------SWKTGVFRNQVDSETHC 65
M P TF F F N R +T+LC+ VE + + V + +N +
Sbjct: 193 MDPDTFTFNFNNDPLVLRRRQTYLCYEVERLDNGTWVLMDQHMGFLCNEAKNLLCGFYGR 252
Query: 66 HAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPD--CAGEVAEFLARHSNVNLTIFTARL 123
HAE FL L P Y+VTW+ SWSPC CAGEV FL +++V L IF AR+
Sbjct: 253 HAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARI 312
Query: 124 YYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRLLKR 183
Y + P Y+E L+ L G V IM Y++F+YCW+ FVY PF+PW GL+ + + L
Sbjct: 313 YDYD-PLYKEALQMLRDAGAQVSIMTYDEFEYCWDTFVYRQGCPFQPWDGLEEHSQALSG 371
Query: 184 RLRESLQ 190
RLR LQ
Sbjct: 372 RLRAILQ 378
>gi|13399304 apolipoprotein B mRNA editing enzyme, catalytic
polypeptide-like 3G [Homo sapiens]
Length = 384
Score = 152 bits (383), Expect = 2e-37
Identities = 84/195 (43%), Positives = 108/195 (55%), Gaps = 6/195 (3%)
Query: 1 MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD 60
M P RN ++ MY TF + F N + RN WLC+ V+ K S +FR QV
Sbjct: 1 MKPHFRNTVERMYRDTFSYNFYNRPILSRRNTVWLCYEVK-TKGPSRPPLDAKIFRGQVY 59
Query: 61 SETHCHAERCFLSWFCD-DILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIF 119
SE H E F WF L + +Y+VTWY SWSPC C ++A FLA V LTIF
Sbjct: 60 SELKYHPEMRFFHWFSKWRKLHRDQEYEVTWYISWSPCTKCTRDMATFLAEDPKVTLTIF 119
Query: 120 TARLYYFQYPCYQEGLRSLSQE----GVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLK 175
ARLYYF P YQE LRSL Q+ ++IM+Y++F++CW FVY+ E F+PW L
Sbjct: 120 VARLYYFWDPDYQEALRSLCQKRDGPRATMKIMNYDEFQHCWSKFVYSQRELFEPWNNLP 179
Query: 176 TNFRLLKRRLRESLQ 190
+ LL L E L+
Sbjct: 180 KYYILLHIMLGEILR 194
Score = 133 bits (335), Expect = 8e-32
Identities = 76/186 (40%), Positives = 110/186 (59%), Gaps = 7/186 (3%)
Query: 11 AMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRS--VVSWKTGVFRNQVDSETHC--- 65
+M P TF F F N R+ET+LC+ VE + + +++ + G NQ +
Sbjct: 196 SMDPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVLLNQRRGFLCNQAPHKHGFLEG 255
Query: 66 -HAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLY 124
HAE CFL L + Y+VT +TSWSPC CA E+A+F++++ +V+L IFTAR+Y
Sbjct: 256 RHAELCFLDVIPFWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIFTARIY 315
Query: 125 YFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRLLKRR 184
Q C QEGLR+L++ G + IM Y +FK+CW+ FV + PF+PW GL + + L R
Sbjct: 316 DDQGRC-QEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGCPFQPWDGLDEHSQDLSGR 374
Query: 185 LRESLQ 190
LR LQ
Sbjct: 375 LRAILQ 380
>gi|10190700 activation-induced cytidine deaminase [Homo sapiens]
Length = 198
Score = 144 bits (363), Expect = 5e-35
Identities = 77/174 (44%), Positives = 100/174 (57%), Gaps = 5/174 (2%)
Query: 17 FYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVDSETHCHAERCFLSWFC 76
F +QFKN+ A R ET+LC+ V+ + S G RN+ CH E FL +
Sbjct: 11 FLYQFKNVRWAKGRRETYLCYVVKRRDSATSFSLDFGYLRNK----NGCHVELLFLRYIS 66
Query: 77 DDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLYYFQ-YPCYQEGL 135
D L P Y+VTW+TSWSPC DCA VA+FL + N++L IFTARLY+ + EGL
Sbjct: 67 DWDLDPGRCYRVTWFTSWSPCYDCARHVADFLRGNPNLSLRIFTARLYFCEDRKAEPEGL 126
Query: 136 RSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRLLKRRLRESL 189
R L + GV + IM ++D+ YCW FV N FK W+GL N L R+LR L
Sbjct: 127 RRLHRAGVQIAIMTFKDYFYCWNTFVENHERTFKAWEGLHENSVRLSRQLRRIL 180
>gi|21955158 phorbolin 1 [Homo sapiens]
Length = 199
Score = 118 bits (296), Expect = 3e-27
Identities = 75/192 (39%), Positives = 99/192 (51%), Gaps = 14/192 (7%)
Query: 8 PMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKT--GVFRNQVDSETHC 65
P M P F F N R++T+LC+ VE + + V G NQ + C
Sbjct: 9 PRHLMDPHIFTSNFNN---GIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLL-C 64
Query: 66 -----HAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPD--CAGEVAEFLARHSNVNLTI 118
HAE FL L P Y+VTW+ SWSPC CAGEV FL +++V L I
Sbjct: 65 GFYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRI 124
Query: 119 FTARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNF 178
F AR+Y + P Y+E L+ L G V IM Y++FK+CW+ FV + PF+PW GL +
Sbjct: 125 FAARIYDYD-PLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLDEHS 183
Query: 179 RLLKRRLRESLQ 190
+ L RLR LQ
Sbjct: 184 QALSGRLRAILQ 195
>gi|5802978 apolipoprotein B mRNA editing enzyme, catalytic
polypeptide-like 2 [Homo sapiens]
Length = 224
Score = 110 bits (276), Expect = 6e-25
Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 7/177 (3%)
Query: 17 FYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVDSETHCHAERCFLSWFC 76
F FQF+N+ ++ RN+T+LC+ VE + V G D HAE F +
Sbjct: 52 FKFQFRNVEYSSGRNKTFLCYVVEAQGKGGQVQASRGYLE---DEHAAAHAEEAFFNTIL 108
Query: 77 DDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLYYFQYPCYQEGLR 136
P +Y VTWY S SPC CA + + L++ N+ L I RL+ ++ P Q L+
Sbjct: 109 P-AFDPALRYNVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLFMWEEPEIQAALK 167
Query: 137 SLSQEGVAVEIMDYEDFKYCWENFV---YNDNEPFKPWKGLKTNFRLLKRRLRESLQ 190
L + G + IM +DF+Y W+NFV +++ F+PW+ ++ NF + +L + L+
Sbjct: 168 KLKEAGCKLRIMKPQDFEYVWQNFVEQEEGESKAFQPWEDIQENFLYYEEKLADILK 224
>gi|33147089 apolipoprotein B mRNA editing enzyme, catalytic
polypeptide-like 3H [Homo sapiens]
Length = 183
Score = 107 bits (266), Expect = 8e-24
Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 4/139 (2%)
Query: 56 RNQVDSETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVN 115
R +++ CHAE CF++ L YQVT Y +WSPC CA E+ +F+ H ++N
Sbjct: 44 RGYFENKKKCHAEICFINEIKSMGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAHDHLN 103
Query: 116 LTIFTARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDN----EPFKPW 171
L IF +RLYY Q+GLR L V VE+M + +F CWENFV ++ P+K
Sbjct: 104 LGIFASRLYYHWCKPQQKGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKML 163
Query: 172 KGLKTNFRLLKRRLRESLQ 190
+ L N R +KRRL Q
Sbjct: 164 EELDKNSRAIKRRLERIKQ 182
>gi|61743957 apolipoprotein B mRNA editing enzyme [Homo sapiens]
Length = 236
Score = 82.8 bits (203), Expect = 2e-16
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 66 HAERCFLSWFCDDI-LSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTARLY 124
H E F+ F + P+ +TW+ SWSPC +C+ + EFL+RH V L I+ ARL+
Sbjct: 61 HVEVNFIKKFTSERDFHPSMSCSITWFLSWSPCWECSQAIREFLSRHPGVTLVIYVARLF 120
Query: 125 YFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFV 161
+ ++GLR L GV ++IM ++ +CW NFV
Sbjct: 121 WHMDQQNRQGLRDLVNSGVTIQIMRASEYYHCWRNFV 157
>gi|54873619 apolipoprotein B mRNA editing enzyme, catalytic
polypeptide-like 3F isoform b [Homo sapiens]
Length = 101
Score = 38.5 bits (88), Expect = 0.004
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 1 MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQV 59
M P RN ++ MY TF + F N + RN WLC+ V+ K S +FR QV
Sbjct: 1 MKPHFRNTVERMYRDTFSYNFYNRPILSRRNTVWLCYEVK-TKGPSRPRLDAKIFRGQV 58
>gi|38201667 inhibitor of growth family, member 1 isoform A [Homo
sapiens]
Length = 279
Score = 28.5 bits (62), Expect = 3.6
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 5/39 (12%)
Query: 65 CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGE 103
C + C + WF + N K + WY CP C GE
Sbjct: 226 CDNDECPIEWFHFSCVGLNHKPKGKWY-----CPKCRGE 259
>gi|38201665 inhibitor of growth family, member 1 isoform B [Homo
sapiens]
Length = 210
Score = 28.5 bits (62), Expect = 3.6
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 5/39 (12%)
Query: 65 CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGE 103
C + C + WF + N K + WY CP C GE
Sbjct: 157 CDNDECPIEWFHFSCVGLNHKPKGKWY-----CPKCRGE 190
>gi|38201663 inhibitor of growth family, member 1 isoform C [Homo
sapiens]
Length = 235
Score = 28.5 bits (62), Expect = 3.6
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 5/39 (12%)
Query: 65 CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGE 103
C + C + WF + N K + WY CP C GE
Sbjct: 182 CDNDECPIEWFHFSCVGLNHKPKGKWY-----CPKCRGE 215
>gi|38201661 inhibitor of growth family, member 1 isoform D [Homo
sapiens]
Length = 422
Score = 28.5 bits (62), Expect = 3.6
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 5/39 (12%)
Query: 65 CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGE 103
C + C + WF + N K + WY CP C GE
Sbjct: 369 CDNDECPIEWFHFSCVGLNHKPKGKWY-----CPKCRGE 402
>gi|4504695 inhibitor of growth family, member 2 [Homo sapiens]
Length = 280
Score = 28.1 bits (61), Expect = 4.8
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Query: 65 CHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGE 103
C E+C + WF +S K + WY CP C G+
Sbjct: 228 CDNEQCPIEWFHFSCVSLTYKPKGKWY-----CPKCRGD 261
>gi|105990535 coagulation factor V precursor [Homo sapiens]
Length = 2224
Score = 27.7 bits (60), Expect = 6.2
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 74 WFCDD-ILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVN 115
WF +D + PN+ Y W+ + P+ G A +S VN
Sbjct: 1693 WFKEDNAVQPNSSYTYVWHATERSGPESPGSACRAWAYYSAVN 1735
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.137 0.468
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,593,960
Number of Sequences: 37866
Number of extensions: 307605
Number of successful extensions: 832
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 800
Number of HSP's gapped (non-prelim): 21
length of query: 190
length of database: 18,247,518
effective HSP length: 96
effective length of query: 94
effective length of database: 14,612,382
effective search space: 1373563908
effective search space used: 1373563908
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.