Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 22749539
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22749539 hypothetical protein LOC257169 [Homo sapiens]
(461 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22749539 hypothetical protein LOC257169 [Homo sapiens] 941 0.0
gi|33286444 mastermind-like 2 [Homo sapiens] 43 7e-04
gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens] 39 0.010
gi|38787904 BMP-2 inducible kinase isoform b [Homo sapiens] 39 0.010
gi|187171277 DNA-directed DNA polymerase gamma [Homo sapiens] 38 0.017
gi|4505937 DNA-directed DNA polymerase gamma [Homo sapiens] 38 0.017
gi|17017963 forkhead box P2 isoform I [Homo sapiens] 38 0.017
gi|22538413 forkhead box P2 isoform III [Homo sapiens] 38 0.017
gi|149999352 forkhead box P2 isoform II [Homo sapiens] 38 0.017
gi|226246533 TOX high mobility group box family member 3 isoform... 38 0.017
gi|226054295 TOX high mobility group box family member 3 isoform... 38 0.017
gi|71725360 zinc finger protein 609 [Homo sapiens] 38 0.017
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 38 0.022
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 38 0.022
gi|104526627 triadin [Homo sapiens] 38 0.022
gi|114431248 hypothetical protein LOC205717 [Homo sapiens] 37 0.029
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 37 0.029
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 37 0.049
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 37 0.049
gi|118421089 chromodomain helicase DNA binding protein 2 isoform... 36 0.064
gi|110611184 chromodomain helicase DNA binding protein 2 isoform... 36 0.064
gi|56549694 enabled homolog isoform a [Homo sapiens] 36 0.084
gi|39930375 enabled homolog isoform b [Homo sapiens] 36 0.084
gi|40354197 THAP domain containing 11 [Homo sapiens] 36 0.084
gi|148277037 AP2 associated kinase 1 [Homo sapiens] 36 0.084
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 35 0.11
gi|110347429 mediator complex subunit 12 [Homo sapiens] 35 0.11
gi|215820630 MON1 homolog A isoform a [Homo sapiens] 35 0.11
gi|4507379 TATA box binding protein [Homo sapiens] 35 0.14
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 35 0.14
>gi|22749539 hypothetical protein LOC257169 [Homo sapiens]
Length = 461
Score = 941 bits (2433), Expect = 0.0
Identities = 461/461 (100%), Positives = 461/461 (100%)
Query: 1 MDLPDESQWDETTCGLAVCQHPQCWATIRRIERGHPRILGSSCKTPLDAEDKLPVLTVVD 60
MDLPDESQWDETTCGLAVCQHPQCWATIRRIERGHPRILGSSCKTPLDAEDKLPVLTVVD
Sbjct: 1 MDLPDESQWDETTCGLAVCQHPQCWATIRRIERGHPRILGSSCKTPLDAEDKLPVLTVVD 60
Query: 61 ILDSGFAAHHLPECTFTKAHSLLSQSSKFYSKFHGRPPKGLPDKSLINCTNRLPKFPVLN 120
ILDSGFAAHHLPECTFTKAHSLLSQSSKFYSKFHGRPPKGLPDKSLINCTNRLPKFPVLN
Sbjct: 61 ILDSGFAAHHLPECTFTKAHSLLSQSSKFYSKFHGRPPKGLPDKSLINCTNRLPKFPVLN 120
Query: 121 LNETQLPCPEDVRNMVVLWIPEETEIHVSQHGKKKRKNSAVKSKSFLGLSGNQSAGTRVG 180
LNETQLPCPEDVRNMVVLWIPEETEIHVSQHGKKKRKNSAVKSKSFLGLSGNQSAGTRVG
Sbjct: 121 LNETQLPCPEDVRNMVVLWIPEETEIHVSQHGKKKRKNSAVKSKSFLGLSGNQSAGTRVG 180
Query: 181 TPGMIVPPPTPVQLSEQFSSDFLPLWAQSEALPQDLLKELLPGGKQTMLCPEMKIKLAMM 240
TPGMIVPPPTPVQLSEQFSSDFLPLWAQSEALPQDLLKELLPGGKQTMLCPEMKIKLAMM
Sbjct: 181 TPGMIVPPPTPVQLSEQFSSDFLPLWAQSEALPQDLLKELLPGGKQTMLCPEMKIKLAMM 240
Query: 241 KKNLPLEKNRPDSVISSKMFLSIHRLTLERPALRYPERLKKLHNLKTEGYRKQQQRQQQQ 300
KKNLPLEKNRPDSVISSKMFLSIHRLTLERPALRYPERLKKLHNLKTEGYRKQQQRQQQQ
Sbjct: 241 KKNLPLEKNRPDSVISSKMFLSIHRLTLERPALRYPERLKKLHNLKTEGYRKQQQRQQQQ 300
Query: 301 QQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYGYRTLPGQNSDMKQQQQ 360
QQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYGYRTLPGQNSDMKQQQQ
Sbjct: 301 QQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYGYRTLPGQNSDMKQQQQ 360
Query: 361 MEKGTTSKQDSTERPKMNYYDHADFHHSVKSPELYETEPTNKDISAPVDAVPEAQAARQK 420
MEKGTTSKQDSTERPKMNYYDHADFHHSVKSPELYETEPTNKDISAPVDAVPEAQAARQK
Sbjct: 361 MEKGTTSKQDSTERPKMNYYDHADFHHSVKSPELYETEPTNKDISAPVDAVPEAQAARQK 420
Query: 421 KISFNFSEIMASTGWNSELKLLRILQDTDDEDEEDQSSGAE 461
KISFNFSEIMASTGWNSELKLLRILQDTDDEDEEDQSSGAE
Sbjct: 421 KISFNFSEIMASTGWNSELKLLRILQDTDDEDEEDQSSGAE 461
>gi|33286444 mastermind-like 2 [Homo sapiens]
Length = 1156
Score = 42.7 bits (99), Expect = 7e-04
Identities = 23/89 (25%), Positives = 45/89 (50%)
Query: 287 TEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYGYR 346
T+ ++QQQ+QQQQQQQQ++ + ++Q+ +++ +S Q + + + +
Sbjct: 587 TQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQ 646
Query: 347 TLPGQNSDMKQQQQMEKGTTSKQDSTERP 375
Q +QQQQ ++ S Q + P
Sbjct: 647 QQQQQQQQQQQQQQQQQQQPSSQPAQSLP 675
Score = 38.9 bits (89), Expect = 0.010
Identities = 22/100 (22%), Positives = 50/100 (50%)
Query: 269 ERPALRYPERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQS 328
+ P++ + L + + ++QQQ+QQQQQQQQ++ + ++Q+ +++ S Q
Sbjct: 570 QMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQ 629
Query: 329 TSHKHPVTTVHDRLYGYRTLPGQNSDMKQQQQMEKGTTSK 368
+ ++ + + Q +QQQQ ++ +S+
Sbjct: 630 QQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQ 669
Score = 35.0 bits (79), Expect = 0.14
Identities = 23/111 (20%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 269 ERPALRYPERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQS 328
++ ++ ++ ++ ++ + ++QQQ+QQQQQQQQ++ + ++Q + + A+S P
Sbjct: 620 QQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPL 679
Query: 329 TSHKHPV-TTVHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDSTERPKMN 378
P+ + + + + G + QQQ+ ++ + Q++ P N
Sbjct: 680 LRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQRQDQHSVVGQNTGPSPSPN 730
Score = 29.6 bits (65), Expect = 6.0
Identities = 33/168 (19%), Positives = 65/168 (38%), Gaps = 28/168 (16%)
Query: 213 PQDLLKELLPGGKQTMLCPEMKIKLAMMKKNLPLEKNRPDSVISSKMFLSIHRLTLERPA 272
PQDL + + M P + N + SV+ S+ S+ T ++
Sbjct: 534 PQDLSRSFINNPHPAME-PRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQ 592
Query: 273 LRYPERLKKLHNLKTEGYRKQQQRQQQQQ-----QQQKKVKTPIKKQEAKKKAKSDPGIQ 327
+ ++ ++ + + ++QQQ+QQQQQ QQQ++ ++ I Q+ +++ + Q
Sbjct: 593 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQ 652
Query: 328 STSHKHPVTTVHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDSTERP 375
Q +QQQQ + + Q +P
Sbjct: 653 Q----------------------QQQQQQQQQQQQPSSQPAQSLPSQP 678
>gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens]
Length = 1161
Score = 38.9 bits (89), Expect = 0.010
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 278 RLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTT 337
RL++LH +++QQQ+QQQQQQQQ +Q+ +++ + H H +
Sbjct: 447 RLQQLHLQHRHPHQQQQQQQQQQQQQQ--------QQQQQQQQQQQQQHHHHHHHHLLQD 498
Query: 338 VHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDSTER--PKMNYYDHADFHHSVKSPELY 395
+ + Y + T Q M QQQ + Q S + M Y A F + L
Sbjct: 499 AYMQQYQHAT---QQQQMLQQQFLMHSVYQPQPSASQYPTMMPQYQQAFFQQQM----LA 551
Query: 396 ETEPTNKDIS 405
+ +P+ + S
Sbjct: 552 QHQPSQQQAS 561
Score = 30.8 bits (68), Expect = 2.7
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 274 RYPERLKKLHNLKTEGYRKQQQRQQQQQQQQ 304
R+P + ++ + + ++QQQ+QQQQQQQQ
Sbjct: 456 RHPHQQQQQQQQQQQQQQQQQQQQQQQQQQQ 486
>gi|38787904 BMP-2 inducible kinase isoform b [Homo sapiens]
Length = 662
Score = 38.9 bits (89), Expect = 0.010
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 278 RLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTT 337
RL++LH +++QQQ+QQQQQQQQ +Q+ +++ + H H +
Sbjct: 447 RLQQLHLQHRHPHQQQQQQQQQQQQQQ--------QQQQQQQQQQQQQHHHHHHHHLLQD 498
Query: 338 VHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDSTER--PKMNYYDHADFHHSVKSPELY 395
+ + Y + T Q M QQQ + Q S + M Y A F + L
Sbjct: 499 AYMQQYQHAT---QQQQMLQQQFLMHSVYQPQPSASQYPTMMPQYQQAFFQQQM----LA 551
Query: 396 ETEPTNKDIS 405
+ +P+ + S
Sbjct: 552 QHQPSQQQAS 561
Score = 30.8 bits (68), Expect = 2.7
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 274 RYPERLKKLHNLKTEGYRKQQQRQQQQQQQQ 304
R+P + ++ + + ++QQQ+QQQQQQQQ
Sbjct: 456 RHPHQQQQQQQQQQQQQQQQQQQQQQQQQQQ 486
>gi|187171277 DNA-directed DNA polymerase gamma [Homo sapiens]
Length = 1239
Score = 38.1 bits (87), Expect = 0.017
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 15/140 (10%)
Query: 287 TEGYRKQQQRQQQQQQQQKKVKTP-IKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYGY 345
++G R++QQ+QQQQQQQQ++ + P + E + + IQ S +H++++G
Sbjct: 36 SDGQRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSR-----GLHEQIFGQ 90
Query: 346 -RTLPGQNSDMKQQQQMEKGTTSKQDSTERPKMN------YYDHADFHHSV--KSPELYE 396
+PG+ + + + ++K Q + P + Y D+ D H + + L
Sbjct: 91 GGEMPGEAAVRRSVEHLQKHGLWGQPAVPLPDVELRLPPLYGDNLDQHFRLLAQKQSLPY 150
Query: 397 TEPTNKDISAPVDAVPEAQA 416
E N + A + P A A
Sbjct: 151 LEAANLLLQAQLPPKPPAWA 170
>gi|4505937 DNA-directed DNA polymerase gamma [Homo sapiens]
Length = 1239
Score = 38.1 bits (87), Expect = 0.017
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 15/140 (10%)
Query: 287 TEGYRKQQQRQQQQQQQQKKVKTP-IKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYGY 345
++G R++QQ+QQQQQQQQ++ + P + E + + IQ S +H++++G
Sbjct: 36 SDGQRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSR-----GLHEQIFGQ 90
Query: 346 -RTLPGQNSDMKQQQQMEKGTTSKQDSTERPKMN------YYDHADFHHSV--KSPELYE 396
+PG+ + + + ++K Q + P + Y D+ D H + + L
Sbjct: 91 GGEMPGEAAVRRSVEHLQKHGLWGQPAVPLPDVELRLPPLYGDNLDQHFRLLAQKQSLPY 150
Query: 397 TEPTNKDISAPVDAVPEAQA 416
E N + A + P A A
Sbjct: 151 LEAANLLLQAQLPPKPPAWA 170
>gi|17017963 forkhead box P2 isoform I [Homo sapiens]
Length = 715
Score = 38.1 bits (87), Expect = 0.017
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 19/140 (13%)
Query: 275 YPERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHP 334
Y ++ ++LH + ++QQQ+QQQQQQQQ++ ++Q+ +++ + Q +HP
Sbjct: 139 YKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQ-----QQQQQQQQQQQQQQQQQQQQQHP 193
Query: 335 VTTVHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDSTERPKMNYYDHADFHHSVKSPEL 394
G + Q +QQQ + +Q + ++ H S++ L
Sbjct: 194 ---------GKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHL---LSLQRQGL 241
Query: 395 YETEPTNKDISAPVDAVPEA 414
P + PV ++P+A
Sbjct: 242 ISIPP--GQAALPVQSLPQA 259
Score = 34.3 bits (77), Expect = 0.24
Identities = 21/95 (22%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 225 KQTMLCPEMKIKLAMMKKNLPLEKNRPDSVISSKMFLSIHRLTLERPALRYPERLKKLHN 284
+Q +L P+ L ++ + L++ + K +H L++ + ++ ++
Sbjct: 109 QQQVLSPQQLQALLQQQQAVMLQQQQLQEFYK-KQQEQLHLQLLQQQQQQQQQQQQQQQQ 167
Query: 285 LKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKK 319
+ + ++QQQ+QQQQQQQQ++ + P K+ + +++
Sbjct: 168 QQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQ 202
>gi|22538413 forkhead box P2 isoform III [Homo sapiens]
Length = 623
Score = 38.1 bits (87), Expect = 0.017
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 19/140 (13%)
Query: 275 YPERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHP 334
Y ++ ++LH + ++QQQ+QQQQQQQQ++ ++Q+ +++ + Q +HP
Sbjct: 47 YKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQ-----QQQQQQQQQQQQQQQQQQQQQHP 101
Query: 335 VTTVHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDSTERPKMNYYDHADFHHSVKSPEL 394
G + Q +QQQ + +Q + ++ H S++ L
Sbjct: 102 ---------GKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHL---LSLQRQGL 149
Query: 395 YETEPTNKDISAPVDAVPEA 414
P + PV ++P+A
Sbjct: 150 ISIPP--GQAALPVQSLPQA 167
Score = 34.3 bits (77), Expect = 0.24
Identities = 21/95 (22%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 225 KQTMLCPEMKIKLAMMKKNLPLEKNRPDSVISSKMFLSIHRLTLERPALRYPERLKKLHN 284
+Q +L P+ L ++ + L++ + K +H L++ + ++ ++
Sbjct: 17 QQQVLSPQQLQALLQQQQAVMLQQQQLQEFYK-KQQEQLHLQLLQQQQQQQQQQQQQQQQ 75
Query: 285 LKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKK 319
+ + ++QQQ+QQQQQQQQ++ + P K+ + +++
Sbjct: 76 QQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQ 110
>gi|149999352 forkhead box P2 isoform II [Homo sapiens]
Length = 740
Score = 38.1 bits (87), Expect = 0.017
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 19/140 (13%)
Query: 275 YPERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHP 334
Y ++ ++LH + ++QQQ+QQQQQQQQ++ ++Q+ +++ + Q +HP
Sbjct: 164 YKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQ-----QQQQQQQQQQQQQQQQQQQQQHP 218
Query: 335 VTTVHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDSTERPKMNYYDHADFHHSVKSPEL 394
G + Q +QQQ + +Q + ++ H S++ L
Sbjct: 219 ---------GKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHL---LSLQRQGL 266
Query: 395 YETEPTNKDISAPVDAVPEA 414
P + PV ++P+A
Sbjct: 267 ISIPP--GQAALPVQSLPQA 284
Score = 34.3 bits (77), Expect = 0.24
Identities = 21/95 (22%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 225 KQTMLCPEMKIKLAMMKKNLPLEKNRPDSVISSKMFLSIHRLTLERPALRYPERLKKLHN 284
+Q +L P+ L ++ + L++ + K +H L++ + ++ ++
Sbjct: 134 QQQVLSPQQLQALLQQQQAVMLQQQQLQEFYK-KQQEQLHLQLLQQQQQQQQQQQQQQQQ 192
Query: 285 LKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKK 319
+ + ++QQQ+QQQQQQQQ++ + P K+ + +++
Sbjct: 193 QQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQ 227
>gi|226246533 TOX high mobility group box family member 3 isoform 2
[Homo sapiens]
Length = 571
Score = 38.1 bits (87), Expect = 0.017
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 15/137 (10%)
Query: 284 NLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLY 343
+++T+ ++ Q Q+QQQQQQQQ + + Q+ + + +Q +H +
Sbjct: 430 SVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQHFQH---------H 480
Query: 344 GYRTLPGQNSDMKQQQQMEKGTTSKQDSTERPKMNYYDHADFHHSVKSPELYETEPTNKD 403
+ L Q ++QQ ++ +Q +R ++ H H S SP + P
Sbjct: 481 MQQHLQQQQQHLQQQINQQQ---LQQQLQQRLQLQQLQHMQ-HQSQPSPR--QHSPVASQ 534
Query: 404 ISAPVDAVPEAQAARQK 420
I++P+ A+ Q A Q+
Sbjct: 535 ITSPIPAIGSPQPASQQ 551
>gi|226054295 TOX high mobility group box family member 3 isoform 1
[Homo sapiens]
Length = 576
Score = 38.1 bits (87), Expect = 0.017
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 15/137 (10%)
Query: 284 NLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLY 343
+++T+ ++ Q Q+QQQQQQQQ + + Q+ + + +Q +H +
Sbjct: 435 SVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQHFQH---------H 485
Query: 344 GYRTLPGQNSDMKQQQQMEKGTTSKQDSTERPKMNYYDHADFHHSVKSPELYETEPTNKD 403
+ L Q ++QQ ++ +Q +R ++ H H S SP + P
Sbjct: 486 MQQHLQQQQQHLQQQINQQQ---LQQQLQQRLQLQQLQHMQ-HQSQPSPR--QHSPVASQ 539
Query: 404 ISAPVDAVPEAQAARQK 420
I++P+ A+ Q A Q+
Sbjct: 540 ITSPIPAIGSPQPASQQ 556
>gi|71725360 zinc finger protein 609 [Homo sapiens]
Length = 1411
Score = 38.1 bits (87), Expect = 0.017
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 16/142 (11%)
Query: 208 QSEALP--QDLLKELLPGGKQTMLCPEMKIKLAMMKKNLPLEKNRPDSVISSKMFLSIHR 265
+S+AL +D E + G + +C E K +L+ + + + RP+ + S +
Sbjct: 920 ESQALKTKRDEEPESIEGKVKNDICEEKKPELSSSSQQPSVIQQRPNMYMQSLYYNQYAY 979
Query: 266 LTLERPALRYPERLKKLHNLKT-----EGYRKQQQR---QQQQQQQQKKVKTPIKKQEA- 316
+ P Y ++ H L T + Y +QQ+R +QQQ+ KK + +K++EA
Sbjct: 980 V----PPYGYSDQSYHTHLLSTNTAYRQQYEEQQKRQSLEQQQRGVDKKAEMGLKEREAA 1035
Query: 317 -KKKAKSDPGIQSTSHKHPVTT 337
K++ K P I T K P T
Sbjct: 1036 LKEEWKQKPSIPPTLTKAPSLT 1057
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 37.7 bits (86), Expect = 0.022
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 291 RKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYGYRT--L 348
++QQQ+QQQQQQQQ++ P QE K + + + + K V + L +T
Sbjct: 494 QQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDDT 553
Query: 349 PGQNSDMKQ 357
G+++D K+
Sbjct: 554 SGEDNDEKE 562
Score = 34.3 bits (77), Expect = 0.24
Identities = 15/36 (41%), Positives = 27/36 (75%)
Query: 286 KTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAK 321
K++ ++QQQ+QQQQQQQQ ++ ++++ K+K K
Sbjct: 492 KSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEK 527
Score = 30.4 bits (67), Expect = 3.5
Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 13/135 (9%)
Query: 290 YRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYGYRTLP 349
Y+K+Q + QQ + K++ K++ A++K K P S P V D +
Sbjct: 656 YKKRQNLDEILQQHKLKME---KERNARRKKKKAPAAASEEAAFP-PVVEDEEMEASGVS 711
Query: 350 GQNSDMKQQQQMEKGTTSKQDSTERPKMNYYDHADFHHSVKSPELYETE--------PTN 401
G +M ++ + +S +S P + K P + P
Sbjct: 712 GNEEEMVEEAEATVNNSSDTESIPSPHTEAAKDTG-QNGPKPPATLGADGPPPGPPTPPP 770
Query: 402 KDISAPVDAVPEAQA 416
+DI AP + P ++A
Sbjct: 771 EDIPAPTEPTPASEA 785
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
sapiens]
Length = 2524
Score = 37.7 bits (86), Expect = 0.022
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 291 RKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYGYRT--L 348
++QQQ+QQQQQQQQ++ P QE K + + + + K V + L +T
Sbjct: 494 QQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDDT 553
Query: 349 PGQNSDMKQ 357
G+++D K+
Sbjct: 554 SGEDNDEKE 562
Score = 34.3 bits (77), Expect = 0.24
Identities = 15/36 (41%), Positives = 27/36 (75%)
Query: 286 KTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAK 321
K++ ++QQQ+QQQQQQQQ ++ ++++ K+K K
Sbjct: 492 KSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEK 527
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 37.7 bits (86), Expect = 0.022
Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 294 QQRQQQQQQQQKKVKTPIKKQEA---KKKAKSDPGIQSTSHKHPVTTVHDRLYGYRTLPG 350
++++ ++++ +KKV + KK+E KKK++ + I K P + G +
Sbjct: 310 EEKEGEKKKAEKKVTSETKKKEKEDIKKKSEKETAID-VEKKEPGKASETK-QGTVKIAA 367
Query: 351 QNSDMKQQQQMEKGTTSKQDSTERPKMNYYDHADFH-HSVKSPELYETEPTNKDISAPVD 409
Q + K +++ + T K E+PK + + H KSP+ + P++K + A +
Sbjct: 368 QAAAKKDEKKEDSKKTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPSDKQVKAKTE 427
Query: 410 AVPE 413
E
Sbjct: 428 RAKE 431
Score = 30.0 bits (66), Expect = 4.6
Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 18/165 (10%)
Query: 276 PERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPV 335
P R K++H KTE K +++ Q + ++K K K +E +K K + K
Sbjct: 137 PLRKKEIHKDKTEKQEKPERKIQTKVTHKEKEKGKEKVREKEKPEKKATHKEKIEKKEKP 196
Query: 336 TTVHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDSTERPKMNYYDHADFHHSVKSPELY 395
T +TL + K ++ E+ T + ++ K+ VK +
Sbjct: 197 ET--------KTLAKEQKKAKTAEKSEEKTKKEVKGGKQEKVK-----QTAAKVKEVQKT 243
Query: 396 ETEPTNKDISAPVDAVPEAQAARQKKISFNFSEIMASTGWNSELK 440
++P K+ D A + ++K + F M + +LK
Sbjct: 244 PSKPKEKE-----DKEKAAVSKHEQKDQYAFCRYMIDIFVHGDLK 283
>gi|114431248 hypothetical protein LOC205717 [Homo sapiens]
Length = 2245
Score = 37.4 bits (85), Expect = 0.029
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 291 RKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYGYRTLPG 350
++QQQ+QQQQQQQQ++ ++ + P +S+ H P VH + RTL
Sbjct: 1463 QQQQQQQQQQQQQQQQAGQLRERHHLYQMQHHVPHAESSVHSQP-HNVHQQ----RTLQ- 1516
Query: 351 QNSDMKQQQQMEKGTTSKQDSTERPKMNYYDHA 383
Q M++++ + +GT + Q S + PK + D +
Sbjct: 1517 QEVQMQKKRNLVQGTQTSQLSLQ-PKHHGTDQS 1548
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 37.4 bits (85), Expect = 0.029
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 269 ERPALRYPERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAK 321
ER ER+K+L L E RK+++R +Q+++++KK K +K+ KK+ K
Sbjct: 356 ERQKREEEERIKRLEEL--EAKRKEEERLEQEKRERKKQKEKERKERLKKEGK 406
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 36.6 bits (83), Expect = 0.049
Identities = 38/163 (23%), Positives = 61/163 (37%), Gaps = 18/163 (11%)
Query: 183 GMIVPPPTPVQLSEQFSSDFLPLWAQSEALPQDLLKELLPGGKQTMLCPEMKIKLAMMKK 242
G + P P+P+ E SS +P L+PG Q M P
Sbjct: 119 GYMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQP----------- 167
Query: 243 NLPLEKNRPDSVISSKMFLSIHRLTLERPALRYPERLKKLHNLKTEGYRKQQQ-RQQQQQ 301
NR S S + L L + L + L +G R +QQQQQ
Sbjct: 168 ------NRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQ 221
Query: 302 QQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYG 344
QQQ++ + ++Q+ ++ + P Q+ + P ++R G
Sbjct: 222 QQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSG 264
Score = 30.0 bits (66), Expect = 4.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 337 TVHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDSTERPK 376
T+ + G RTLPG +QQQQ ++ +Q ++P+
Sbjct: 201 TLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQ 240
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 36.6 bits (83), Expect = 0.049
Identities = 38/163 (23%), Positives = 61/163 (37%), Gaps = 18/163 (11%)
Query: 183 GMIVPPPTPVQLSEQFSSDFLPLWAQSEALPQDLLKELLPGGKQTMLCPEMKIKLAMMKK 242
G + P P+P+ E SS +P L+PG Q M P
Sbjct: 119 GYMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQP----------- 167
Query: 243 NLPLEKNRPDSVISSKMFLSIHRLTLERPALRYPERLKKLHNLKTEGYRKQQQ-RQQQQQ 301
NR S S + L L + L + L +G R +QQQQQ
Sbjct: 168 ------NRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQ 221
Query: 302 QQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYG 344
QQQ++ + ++Q+ ++ + P Q+ + P ++R G
Sbjct: 222 QQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSG 264
Score = 30.0 bits (66), Expect = 4.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 337 TVHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDSTERPK 376
T+ + G RTLPG +QQQQ ++ +Q ++P+
Sbjct: 201 TLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQ 240
>gi|118421089 chromodomain helicase DNA binding protein 2 isoform 1
[Homo sapiens]
Length = 1828
Score = 36.2 bits (82), Expect = 0.064
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 34/190 (17%)
Query: 223 GGKQTMLCPEMKIKLAMMKKNLPLEKNRPDSVISSKMFLSIHRLTLERPALRYPERLKKL 282
G K + PE K K A K+ + K + + ++ + + + P R
Sbjct: 72 GSKSQPVLPEAKEKPASKKERIADVKKMWEE------YPDVYGVRRSNRSRQEPSRF--- 122
Query: 283 HNLKTE-------GYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPV 335
N+K E G K++ ++Q ++Q++ K + +QE A+S+P + + PV
Sbjct: 123 -NIKEEASSGSESGSPKRRGQRQLKKQEKWKQEPSEDEQEQGTSAESEPEQKKVKARRPV 181
Query: 336 TTVHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDST-------ERPKMNYYDHADFHHS 388
RT+P +K+Q + ++G KQDS+ E PK A + S
Sbjct: 182 PR--------RTVP--KPRVKKQPKTQRGKRKKQDSSDEDDDDDEAPKRQTRRRAAKNVS 231
Query: 389 VKSPELYETE 398
K + +ET+
Sbjct: 232 YKEDDDFETD 241
>gi|110611184 chromodomain helicase DNA binding protein 2 isoform 2
[Homo sapiens]
Length = 501
Score = 36.2 bits (82), Expect = 0.064
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 34/190 (17%)
Query: 223 GGKQTMLCPEMKIKLAMMKKNLPLEKNRPDSVISSKMFLSIHRLTLERPALRYPERLKKL 282
G K + PE K K A K+ + K + + ++ + + + P R
Sbjct: 72 GSKSQPVLPEAKEKPASKKERIADVKKMWEE------YPDVYGVRRSNRSRQEPSRF--- 122
Query: 283 HNLKTE-------GYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPV 335
N+K E G K++ ++Q ++Q++ K + +QE A+S+P + + PV
Sbjct: 123 -NIKEEASSGSESGSPKRRGQRQLKKQEKWKQEPSEDEQEQGTSAESEPEQKKVKARRPV 181
Query: 336 TTVHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDST-------ERPKMNYYDHADFHHS 388
RT+P +K+Q + ++G KQDS+ E PK A + S
Sbjct: 182 PR--------RTVP--KPRVKKQPKTQRGKRKKQDSSDEDDDDDEAPKRQTRRRAAKNVS 231
Query: 389 VKSPELYETE 398
K + +ET+
Sbjct: 232 YKEDDDFETD 241
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 35.8 bits (81), Expect = 0.084
Identities = 31/163 (19%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 262 SIHRLTLERPALRYPERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAK 321
S L ++R L+ +R K+L + E R +++R ++++ ++++++ +QE ++ +
Sbjct: 136 SQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERER 195
Query: 322 SDPGIQSTSHKHPVTTVHDRLYGYRTLPGQNSDMKQQQQM-----EKGTTSKQDSTERPK 376
+ Q + +RL L + + ++++++ E+ +Q+ ER +
Sbjct: 196 QERERQERLERQERLERQERLERQERLDRERQERQERERLERLERERQERERQEQLEREQ 255
Query: 377 MNYYDHADFHHSVKSPELYETEPTNKDISAPVDAVPEAQAARQ 419
+ ++ S +P ET P N + + P QAA Q
Sbjct: 256 LE-WERERRISSAAAPASVET-PLNSVLGDSSASEPGLQAASQ 296
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 35.8 bits (81), Expect = 0.084
Identities = 31/163 (19%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 262 SIHRLTLERPALRYPERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAK 321
S L ++R L+ +R K+L + E R +++R ++++ ++++++ +QE ++ +
Sbjct: 136 SQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERER 195
Query: 322 SDPGIQSTSHKHPVTTVHDRLYGYRTLPGQNSDMKQQQQM-----EKGTTSKQDSTERPK 376
+ Q + +RL L + + ++++++ E+ +Q+ ER +
Sbjct: 196 QERERQERLERQERLERQERLERQERLDRERQERQERERLERLERERQERERQEQLEREQ 255
Query: 377 MNYYDHADFHHSVKSPELYETEPTNKDISAPVDAVPEAQAARQ 419
+ ++ S +P ET P N + + P QAA Q
Sbjct: 256 LE-WERERRISSAAAPASVET-PLNSVLGDSSASEPGLQAASQ 296
>gi|40354197 THAP domain containing 11 [Homo sapiens]
Length = 314
Score = 35.8 bits (81), Expect = 0.084
Identities = 15/34 (44%), Positives = 27/34 (79%)
Query: 291 RKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDP 324
R+QQQ+QQQQQQQQ++ + ++Q+ +++ +S P
Sbjct: 102 RRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSP 135
Score = 35.4 bits (80), Expect = 0.11
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 265 RLTLERPALRYPERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDP 324
R RPA R ++ + + ++QQQ+QQQQQQQQ++ + + A+ P
Sbjct: 88 RKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQP 147
Query: 325 GIQSTS 330
+ S S
Sbjct: 148 NLVSAS 153
Score = 32.7 bits (73), Expect = 0.71
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 291 RKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHP 334
++QQQ+QQQQQQQQ++ + ++Q+ ++++ T+ P
Sbjct: 104 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQP 147
>gi|148277037 AP2 associated kinase 1 [Homo sapiens]
Length = 961
Score = 35.8 bits (81), Expect = 0.084
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 188 PPTPVQLSEQFSSDFLPLWAQSEALPQDLLKELLPGGKQTMLCPEMKIKLAMMKKNLPLE 247
PPTP Q S+ L AQ++A PQ + L +Q P + + P
Sbjct: 439 PPTPQQTP---STQAQGLPAQAQATPQHQQQLFLKQQQQQQQPPPAQQQ--------PAG 487
Query: 248 KNRPDSVISSKMFLSIHRLTLERPALRYPERLKKLHNLKTEGYRKQQQRQQQQQQQQKKV 307
++ F ++H T + ++P + + QQQ+QQQQQQQQ+++
Sbjct: 488 TFYQQQQAQTQQFQAVHPATQQPAIAQFPVVSQGGSQQQLMQNFYQQQQQQQQQQQQQQL 547
Query: 308 KTPIKKQE 315
T + +Q+
Sbjct: 548 ATALHQQQ 555
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 35.4 bits (80), Expect = 0.11
Identities = 18/64 (28%), Positives = 39/64 (60%)
Query: 269 ERPALRYPERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQS 328
+R R ER ++ + +G RK+++R++++++++K+ K +K++ KKK K + G S
Sbjct: 68 KRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTS 127
Query: 329 TSHK 332
K
Sbjct: 128 KEGK 131
Score = 29.6 bits (65), Expect = 6.0
Identities = 11/38 (28%), Positives = 28/38 (73%)
Query: 286 KTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSD 323
K E RK++++++++++++++ K KK+E KK+ + D
Sbjct: 188 KRERNRKERKKERERKERRERKKERKKKEERKKERQKD 225
>gi|110347429 mediator complex subunit 12 [Homo sapiens]
Length = 2177
Score = 35.4 bits (80), Expect = 0.11
Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 276 PERLKKLHNLKTEGYRKQQQRQQQQQQQ----QKKVKTPIKKQEAKKKAKSDPGIQSTSH 331
PE+ ++ + + ++QQQ+QQQQQQQ Q++ + +++Q+ +++ + Q
Sbjct: 2049 PEQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQ 2108
Query: 332 KHPVTTVHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDSTE 373
+ H + + P Q Q Q +G Q +
Sbjct: 2109 QQQQQQQHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQ 2150
Score = 33.5 bits (75), Expect = 0.42
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 16/86 (18%)
Query: 291 RKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYGYRTLPG 350
++QQQ+QQQQQQQQ++ + I++Q+ ++ + Q +
Sbjct: 2059 QQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQ---------------- 2102
Query: 351 QNSDMKQQQQMEKGTTSKQDSTERPK 376
Q +QQQQ ++ +Q P+
Sbjct: 2103 QQQQQQQQQQQQQHQQQQQQQAAPPQ 2128
Score = 32.7 bits (73), Expect = 0.71
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 17/82 (20%)
Query: 291 RKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYGYRTLPG 350
++QQQ+QQQ QQQQ++ P + Q + G+Q T +
Sbjct: 2107 QQQQQQQQQHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQ----------------- 2149
Query: 351 QNSDMKQQQQMEKGTTSKQDST 372
Q + + +Q Q + T Q ST
Sbjct: 2150 QTAALVRQLQQQLSNTQPQPST 2171
Score = 31.6 bits (70), Expect = 1.6
Identities = 14/51 (27%), Positives = 33/51 (64%)
Query: 274 RYPERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDP 324
+Y R ++ + + ++QQQ+QQQQQQQQ++ + ++ + +++ ++ P
Sbjct: 2076 QYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQAAP 2126
>gi|215820630 MON1 homolog A isoform a [Homo sapiens]
Length = 652
Score = 35.4 bits (80), Expect = 0.11
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 180 GTPGMIVPPPTPVQLSEQFSSDFLPLWAQSEALPQDLLKELLPGGKQTMLCP 231
GT G PPP P + Q S DF L Q + +DL +E+LPG + L P
Sbjct: 173 GTRG---PPPLPTDM-RQISQDFSELSTQLTGVARDLQEEMLPGSSEDWLEP 220
>gi|4507379 TATA box binding protein [Homo sapiens]
Length = 339
Score = 35.0 bits (79), Expect = 0.14
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 20/148 (13%)
Query: 203 LPLWAQSEALPQDLLKELLPGGKQTMLCPEMKIKLAMMKKNLPLEKNRPDSVISSKMFLS 262
LP +AQ A PQ + +P + P M + + P++ S++
Sbjct: 7 LPPYAQGLASPQGAMTPGIP-----IFSPMMPYGTGLTPQ--PIQNTNSLSILE------ 53
Query: 263 IHRLTLERPALRYPERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKS 322
E+ + ++ ++ + + ++QQQ+QQQQQQQQ++ + A +++ S
Sbjct: 54 ------EQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTS 107
Query: 323 DPGIQSTSHKHPVTTVHDRLYGYRTLPG 350
Q TS + P H + LPG
Sbjct: 108 QQATQGTSGQAP-QLFHSQTLTTAPLPG 134
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 35.0 bits (79), Expect = 0.14
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 259 MFLSIHRLTLERPALRYPERLKK-------LHNLKTEGYRKQQQRQQQQQQQQKKVKTPI 311
+F S+ R ++ P R+PE L + + ++QQQ+QQQQQQQQ++ +T
Sbjct: 26 LFQSV-REVIQNPGPRHPEAASAAPPGASLLLLQQQQQQQQQQQQQQQQQQQQQQQETSP 84
Query: 312 KKQEAKKKAKSDPGIQSTSHKHPVTTVHDRLYGYRTLPGQNSDMKQQQQME 362
++Q+ ++ P +H+ T GY L + + Q +E
Sbjct: 85 RQQQQQQGEDGSP----QAHRRGPT-------GYLVLDEEQQPSQPQSALE 124
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,943,108
Number of Sequences: 37866
Number of extensions: 974459
Number of successful extensions: 8217
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 164
Number of HSP's that attempted gapping in prelim test: 5269
Number of HSP's gapped (non-prelim): 1573
length of query: 461
length of database: 18,247,518
effective HSP length: 106
effective length of query: 355
effective length of database: 14,233,722
effective search space: 5052971310
effective search space used: 5052971310
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.