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Search of human proteins with 22749483
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22749483 hypothetical protein LOC253868 [Homo sapiens]
(134 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22749483 hypothetical protein LOC253868 [Homo sapiens] 288 9e-79
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 39 0.001
gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens] 37 0.006
gi|57864582 hornerin [Homo sapiens] 36 0.011
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 35 0.018
gi|206597556 kelch domain containing 7B [Homo sapiens] 35 0.018
gi|38683851 round spermatid basic protein 1 [Homo sapiens] 35 0.018
gi|4758216 dishevelled 2 [Homo sapiens] 35 0.024
gi|46249414 latent transforming growth factor beta binding prote... 34 0.031
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] 34 0.031
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 34 0.031
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 34 0.031
gi|239748415 PREDICTED: hypothetical protein [Homo sapiens] 34 0.040
gi|239742343 PREDICTED: hypothetical protein XP_002342497 [Homo ... 34 0.040
gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens] 33 0.052
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho... 33 0.052
gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Ho... 33 0.052
gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Ho... 33 0.052
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 33 0.069
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 33 0.069
gi|239753856 PREDICTED: hypothetical protein [Homo sapiens] 33 0.069
gi|239753407 PREDICTED: hypothetical protein [Homo sapiens] 33 0.069
gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isof... 33 0.089
gi|239049540 FCH domain only 1 isoform c [Homo sapiens] 32 0.12
gi|239049457 FCH domain only 1 isoform b [Homo sapiens] 32 0.12
gi|29789054 FCH domain only 1 isoform b [Homo sapiens] 32 0.12
gi|239049440 FCH domain only 1 isoform a [Homo sapiens] 32 0.12
gi|189491748 ataxin 1 [Homo sapiens] 32 0.12
gi|51479158 ataxin 1 [Homo sapiens] 32 0.12
gi|14149904 anthrax toxin receptor 1 isoform 1 precursor [Homo s... 32 0.12
>gi|22749483 hypothetical protein LOC253868 [Homo sapiens]
Length = 134
Score = 288 bits (737), Expect = 9e-79
Identities = 134/134 (100%), Positives = 134/134 (100%)
Query: 1 MQTLATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPRHSASHGATPSGLRRGLHCR 60
MQTLATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPRHSASHGATPSGLRRGLHCR
Sbjct: 1 MQTLATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPRHSASHGATPSGLRRGLHCR 60
Query: 61 EGPSDSGFQPHPGPPLSVPSGPLAPRARRHPNPLGMSVLRMWHTRPGRAILLLLHPPQPW 120
EGPSDSGFQPHPGPPLSVPSGPLAPRARRHPNPLGMSVLRMWHTRPGRAILLLLHPPQPW
Sbjct: 61 EGPSDSGFQPHPGPPLSVPSGPLAPRARRHPNPLGMSVLRMWHTRPGRAILLLLHPPQPW 120
Query: 121 IRGLYRGQKFTQSR 134
IRGLYRGQKFTQSR
Sbjct: 121 IRGLYRGQKFTQSR 134
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 38.9 bits (89), Expect = 0.001
Identities = 43/134 (32%), Positives = 51/134 (38%), Gaps = 23/134 (17%)
Query: 3 TLATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPRHSASHGATPSGLRRGLHCREG 62
T GH H S PH G G S+ + H HG P GL H G
Sbjct: 280 TPGAGHPGHGHSHPHPFPPGGMPHP-GMSQMQLAH--------HG--PHGLG---HPHAG 325
Query: 63 PSDSGFQPHPGPPLSVP-SGP----LAPRARRHPNPLGMSVLRMWHTRPGRAILLLLH-- 115
P SG QP P PP +P GP + PR +P+G H G L+ H
Sbjct: 326 PPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGY 385
Query: 116 --PPQPWIRGLYRG 127
PP+P G RG
Sbjct: 386 TGPPRPPPYGYQRG 399
>gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens]
Length = 1597
Score = 36.6 bits (83), Expect = 0.006
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 8 HLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPRHSASHGATPSGLRRGLHCREGPSDS- 66
HL S PH+ GR S GA +H G + GLRR EG SDS
Sbjct: 998 HLEKASSWPHRRDSGRPPGDSSGQAVAPSEGANKHK---GWSRQGLRRPSILPEGSSDSR 1054
Query: 67 --GFQPHPGP 74
+ HPGP
Sbjct: 1055 GPAVEKHPGP 1064
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 35.8 bits (81), Expect = 0.011
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPR-HSASHGATPSGLRRGLHCREGP 63
++G+ H SS H + G+ +SG S + G HGA S+SHG SG + +
Sbjct: 594 SSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGATSGQSSSHGQHGSGSSQSSRYGQQG 653
Query: 64 SDSGFQPHPG 73
S SG P G
Sbjct: 654 SGSGQSPSRG 663
Score = 34.3 bits (77), Expect = 0.031
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHG-APRHSASHGATPSGLRRGLHCREGP 63
++G+ H S H S G+ +SG + + G HG + R S+S+G S R G
Sbjct: 358 SSGYSKHGSGSGHSSSQGQHGSTSGQASSSGQHGSSSRQSSSYGQHESASRHS--SGRGQ 415
Query: 64 SDSGFQPHPGPPLSVPSGPLAPRARRHPNPLGMS 97
SG PG +P + +H G S
Sbjct: 416 HSSGSGQSPGHGQRGSGSGQSPSSGQHGTGFGRS 449
Score = 33.9 bits (76), Expect = 0.040
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGA-PRHSASHGATPSGLRRG-LHCREG 62
++G+ H S G R + SSG S + G HG+ R S HG SG R+ H R G
Sbjct: 254 SSGYGQHGSRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQGSGSRQSPSHVRHG 313
Query: 63 PSDSGFQPH 71
H
Sbjct: 314 SGSGHSSSH 322
Score = 33.9 bits (76), Expect = 0.040
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPR-HSASHGATPSGLRRGLHCREGP 63
++G+ H SS H + G+ +SG S + G HGA S+SHG SG +
Sbjct: 1060 SSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQG 1119
Query: 64 SDSGFQPHPG 73
S SG P G
Sbjct: 1120 SGSGQSPGHG 1129
Score = 33.9 bits (76), Expect = 0.040
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPR-HSASHGATPSGLRRGLHCREGP 63
++G+ H SS H + G+ +SG S + G HGA S+SHG SG +
Sbjct: 1530 SSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQG 1589
Query: 64 SDSGFQPHPG 73
S SG P G
Sbjct: 1590 SGSGQSPGHG 1599
Score = 33.9 bits (76), Expect = 0.040
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPR-HSASHGATPSGLRRGLHCREGP 63
++G+ H SS H + G+ +SG S + G HGA S+SHG SG +
Sbjct: 2000 SSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQG 2059
Query: 64 SDSGFQPHPG 73
S SG P G
Sbjct: 2060 SGSGQSPGHG 2069
Score = 33.9 bits (76), Expect = 0.040
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPR-HSASHGATPSGLRRGLHCREGP 63
++G+ H SS H + G+ +SG S + G HGA S+SHG SG +
Sbjct: 2470 SSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQG 2529
Query: 64 SDSGFQPHPG 73
S SG P G
Sbjct: 2530 SGSGQSPGHG 2539
Score = 33.5 bits (75), Expect = 0.052
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGA--------PRHSASHGATPSGLRRG 56
++GH H S G R S+G S + G HG+ RH + G +PS RG
Sbjct: 488 SSGHGQHGSRSGQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQSPSP-SRG 546
Query: 57 LHCREGPSDSGFQPH 71
H S + PH
Sbjct: 547 RHESGSRQSSSYGPH 561
Score = 32.0 bits (71), Expect = 0.15
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGA-PRHSASHGATPSGL----RRGLH- 58
++G+ H S G R SSG S G HG+ R S+ HG SG RG H
Sbjct: 2130 SSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHG 2189
Query: 59 CREGPSDSGFQPHPGPPLSVPSGPLAPRA 87
G S S Q G S GP R+
Sbjct: 2190 SGSGHSSSHGQHGSGSGRSSSRGPYESRS 2218
Score = 31.6 bits (70), Expect = 0.20
Identities = 32/83 (38%), Positives = 36/83 (43%), Gaps = 22/83 (26%)
Query: 7 GHLAHEGSSPHKLSGGRTQESSG--FSEAKGGHG--------------APRHSASHGATP 50
GH HE SS H S G TQ SG S G HG + S+S+G
Sbjct: 466 GH--HESSSEH--SSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAGSSSSYGQHG 521
Query: 51 SGLRRGL-HCREGPSDSGFQPHP 72
SG R+ L H R G S SG P P
Sbjct: 522 SGSRQSLGHSRHG-SGSGQSPSP 543
Score = 31.6 bits (70), Expect = 0.20
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAP---RHSASHGATPSGLRRGLHCRE 61
++GH S H S R SSG S + G HG+ S H + SG G E
Sbjct: 762 SSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCSSSCGHYESGSGQASGFGQHE 821
Query: 62 GPSDSGFQPH 71
S G+ H
Sbjct: 822 SGSGQGYSQH 831
Score = 31.6 bits (70), Expect = 0.20
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 12/72 (16%)
Query: 5 ATGHLAHEG----SSPHKLSGGRTQESSGFSEAKGGH--------GAPRHSASHGATPSG 52
A+GH + +G +S S G+ SSG S + G H G RH + G +P
Sbjct: 834 ASGHFSSQGRHGSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGH 893
Query: 53 LRRGLHCREGPS 64
+RG + PS
Sbjct: 894 GQRGSGSGQSPS 905
Score = 30.8 bits (68), Expect = 0.34
Identities = 28/92 (30%), Positives = 37/92 (40%), Gaps = 5/92 (5%)
Query: 3 TLATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPRHSASHGATPSGLRRGLHCR-- 60
T +G G S HK S G +SSG+S+ G G HG+ RG R
Sbjct: 220 THGSGSGQSSGFSQHKSSSG---QSSGYSQHGSGSGHSSGYGQHGSRSGQSSRGERHRSS 276
Query: 61 EGPSDSGFQPHPGPPLSVPSGPLAPRARRHPN 92
G S S Q G S+ G +R+ P+
Sbjct: 277 SGSSSSYGQHGSGSRQSLGHGRQGSGSRQSPS 308
Score = 30.4 bits (67), Expect = 0.44
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPR-HSASHGATPSGLRRGLHCREGP 63
++G+ H S H S + SG S HG+ S+S+G SG R+ L +
Sbjct: 941 SSGYTQHGSGSGHSSSYEQHGSRSGQSSRSEQHGSSSGSSSSYGQHGSGSRQSLGHGQHG 1000
Query: 64 SDSGFQPHP 72
S SG P P
Sbjct: 1001 SGSGQSPSP 1009
Score = 30.4 bits (67), Expect = 0.44
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGA-PRHSASHGATPSGL----RRGLH- 58
++G+ H S G R SSG S G HG+ R S+ HG SG RG H
Sbjct: 1190 SSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHG 1249
Query: 59 CREGPSDSGFQPHPGPPLSVPSGPLAPRA 87
G S S Q G S GP R+
Sbjct: 1250 SGLGHSSSHGQHGSGSGRSSSRGPYESRS 1278
Score = 30.4 bits (67), Expect = 0.44
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 11 HEGSSPHKLSGGRTQESSGFSEAKGGHGAPR-HSASHGATPSGLRRGLHCREGPSDSG 67
+E S H G + SG S G HG+ HS++HG S + C + + SG
Sbjct: 1510 YESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSG 1567
Score = 30.0 bits (66), Expect = 0.58
Identities = 27/91 (29%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Query: 7 GHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPRHSASHGATPSGLRRGLHCREGPSDS 66
GH HE SS S + SG S G HG+ +S G R R G S
Sbjct: 1638 GH--HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSRS-SSRYGQHGS 1694
Query: 67 GFQPHPGPPLSVPSGPLAPRARRHPNPLGMS 97
G + G +P RH + LG S
Sbjct: 1695 GSRQSSGHGRQGSGSGQSPSRGRHGSGLGHS 1725
Score = 30.0 bits (66), Expect = 0.58
Identities = 27/91 (29%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Query: 7 GHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPRHSASHGATPSGLRRGLHCREGPSDS 66
GH HE SS S + SG S G HG+ +S G G G G S
Sbjct: 2578 GH--HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGER-HGSSSGSSSHYGQHGS 2634
Query: 67 GFQPHPGPPLSVPSGPLAPRARRHPNPLGMS 97
G + G +P RH + LG S
Sbjct: 2635 GSRQSSGHGRQGSGSGQSPSRGRHGSGLGHS 2665
Score = 30.0 bits (66), Expect = 0.58
Identities = 30/88 (34%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGA-PRHSASHGATPSGL----RRGLH- 58
++G+ H S G R SSG S G HG+ R S+ HG SG RG H
Sbjct: 2600 SSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHG 2659
Query: 59 CREGPSDSGFQPHPGPPLSVPSGPLAPR 86
G S S Q G S GP R
Sbjct: 2660 SGLGHSSSHGQHGSGSGRSSSRGPYESR 2687
Score = 29.6 bits (65), Expect = 0.76
Identities = 27/91 (29%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Query: 7 GHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPRHSASHGATPSGLRRGLHCREGPSDS 66
GH HE SS S + SG S G HG+ +S G G G G S
Sbjct: 1168 GH--HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGER-HGSSSGSSSHYGQHGS 1224
Query: 67 GFQPHPGPPLSVPSGPLAPRARRHPNPLGMS 97
G + G +P RH + LG S
Sbjct: 1225 GSRQSSGHGRQGSGSGHSPSRGRHGSGLGHS 1255
Score = 29.6 bits (65), Expect = 0.76
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPR-HSASHGATPSGLRRGLHCREGP 63
++G+ H S H S + SG S HG+ S+S+G SG R+ L +
Sbjct: 1881 SSGYTQHGSGSGHSSSYEQHGSRSGQSSRGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHG 1940
Query: 64 SDSGFQPHP 72
S SG P P
Sbjct: 1941 SGSGQSPSP 1949
Score = 29.6 bits (65), Expect = 0.76
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPR-HSASHGATPSGLRRGLHCREGP 63
++G+ H S H S + SG S HG+ S+S+G SG R+ L +
Sbjct: 2351 SSGYTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHG 2410
Query: 64 SDSGFQPHP 72
S SG P P
Sbjct: 2411 SGSGQSPSP 2419
Score = 29.3 bits (64), Expect = 0.99
Identities = 27/91 (29%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Query: 7 GHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPRHSASHGATPSGLRRGLHCREGPSDS 66
GH HE SS S + SG S G HG+ +S G G G R G S
Sbjct: 2108 GH--HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGER-HGSSSGSSSRYGQHGS 2164
Query: 67 GFQPHPGPPLSVPSGPLAPRARRHPNPLGMS 97
G + G +P RH + G S
Sbjct: 2165 GSRQSSGHGRQGSGSGHSPSRGRHGSGSGHS 2195
Score = 28.9 bits (63), Expect = 1.3
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 8/65 (12%)
Query: 8 HLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAP--------RHSASHGATPSGLRRGLHC 59
H H +S S G+ SSG S + G HG+ R + G +P +RG
Sbjct: 1076 HGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGS 1135
Query: 60 REGPS 64
R+ PS
Sbjct: 1136 RQSPS 1140
Score = 28.9 bits (63), Expect = 1.3
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPRHSASH-GATPSGLRRGL-HCREG 62
++ + H S H G+ SG S HG+ S+SH G SG R+ H R+G
Sbjct: 1177 SSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQG 1236
Query: 63 PSDSGFQPHPG 73
S SG P G
Sbjct: 1237 -SGSGHSPSRG 1246
Score = 28.9 bits (63), Expect = 1.3
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 8/65 (12%)
Query: 8 HLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAP--------RHSASHGATPSGLRRGLHC 59
H H +S S G+ SSG S + G HG+ R + G +P +RG
Sbjct: 1546 HGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGS 1605
Query: 60 REGPS 64
R+ PS
Sbjct: 1606 RQSPS 1610
Score = 28.9 bits (63), Expect = 1.3
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 8/65 (12%)
Query: 8 HLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAP--------RHSASHGATPSGLRRGLHC 59
H H +S S G+ SSG S + G HG+ R + G +P +RG
Sbjct: 2016 HGQHGSASGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGS 2075
Query: 60 REGPS 64
R+ PS
Sbjct: 2076 RQSPS 2080
Score = 28.9 bits (63), Expect = 1.3
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 8/65 (12%)
Query: 8 HLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAP--------RHSASHGATPSGLRRGLHC 59
H H +S S G+ SSG S + G HG+ R + G +P +RG
Sbjct: 2486 HGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGS 2545
Query: 60 REGPS 64
R+ PS
Sbjct: 2546 RQSPS 2550
Score = 28.1 bits (61), Expect = 2.2
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPRHSASH-GATPSGLRRGL-HCREG 62
++ + H S H G+ SG S HG+ S+SH G SG R+ H R+G
Sbjct: 2587 SSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQG 2646
Query: 63 PSDSGFQPHPG 73
S SG P G
Sbjct: 2647 -SGSGQSPSRG 2656
Score = 27.7 bits (60), Expect = 2.9
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPRH-SASHGATPSG 52
++G+ H S + SSG S + G HG+ H S+ HG SG
Sbjct: 723 SSGYRKHGSRSGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSG 771
Score = 27.7 bits (60), Expect = 2.9
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPR-HSASHGATPSGLRRGLHCREGP 63
++G H S H S + SG S HG+ S+S+G SG R+ L +
Sbjct: 1411 SSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHG 1470
Query: 64 SDSGFQPHP 72
S SG P P
Sbjct: 1471 SGSGQSPSP 1479
Score = 27.7 bits (60), Expect = 2.9
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGA-PRHSASHGATPSGLRRGLHCREGP 63
++GH S H S GR SG S + G HG+ S+S G P R G G
Sbjct: 2169 SSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSSSRG--PYESRSGHSSVFGQ 2226
Query: 64 SDSG 67
+SG
Sbjct: 2227 HESG 2230
Score = 26.9 bits (58), Expect = 4.9
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 11 HEGSSPHKLSGGRTQESSGFSEAKGGHGA-PRHSASHGATPSGLRRGLHCREGPSDSG 67
H S H S G+ SG+S + G HG+ S+ G S + C + S SG
Sbjct: 1365 HGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGCTQHGSGSG 1422
Score = 26.2 bits (56), Expect = 8.4
Identities = 25/97 (25%), Positives = 35/97 (36%), Gaps = 6/97 (6%)
Query: 2 QTLATGHLAHEG-SSPHKLSGGRTQESSGFSEAKGGHGAPRHSASHGATPSGLRRGLHCR 60
Q+ GH + G SS + G + SSG+ + G S HG++ GL
Sbjct: 697 QSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSGQSSRSEQHGSS-----SGLSSS 751
Query: 61 EGPSDSGFQPHPGPPLSVPSGPLAPRARRHPNPLGMS 97
G SG G +P RH + G S
Sbjct: 752 YGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHS 788
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 35.0 bits (79), Expect = 0.018
Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 8/75 (10%)
Query: 5 ATGHLAHEGSSPHKLSGGRTQESSGFSEAKGGHGAPRHSASHGATPSGLRRGLHCREGP- 63
++GH HEG SG R E G S GG P H G G G EGP
Sbjct: 764 SSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRP-HEGPGGGISGG--SGHRPHEGPG 820
Query: 64 ----SDSGFQPHPGP 74
+ G +PH GP
Sbjct: 821 GGMGAGGGHRPHEGP 835
Score = 33.9 bits (76), Expect = 0.040
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 9/77 (11%)
Query: 6 TGHLAHEGSSPHKLSGGRTQESSGFSEAKGG------HGAPRHSASHGATPSGL--RRGL 57
+GH HEG +GG + G + GG H P H HG P + RG
Sbjct: 811 SGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRG- 869
Query: 58 HCREGPSDSGFQPHPGP 74
H GP + H GP
Sbjct: 870 HDHRGPPPHEHRGHDGP 886
Score = 30.0 bits (66), Expect = 0.58
Identities = 25/78 (32%), Positives = 30/78 (38%), Gaps = 12/78 (15%)
Query: 7 GHLAHEGSSPHKLSGGRTQESSGFSEAKG-----GHGAPRHSASHGATPSGLRRGLHCRE 61
G + G PH+ GG SSG +G G G H G+ G G E
Sbjct: 744 GMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGG--GGHRPHE 801
Query: 62 GP-----SDSGFQPHPGP 74
GP SG +PH GP
Sbjct: 802 GPGGGISGGSGHRPHEGP 819
>gi|206597556 kelch domain containing 7B [Homo sapiens]
Length = 594
Score = 35.0 bits (79), Expect = 0.018
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
Query: 27 SSGFSEAKGGHGAPRHSASHGAT----PSGLRRGLHCREGPSDSGFQPHPGPPLSVPSGP 82
+ G EA GG PR S ++G+ P GLR G RE D P P ++P GP
Sbjct: 53 TGGLVEA-GGQPQPRSSETNGSPSPDPPPGLR-GEGTREKSLD------PLPQAAMPRGP 104
Query: 83 LAPRARRHPNPLGMSVLR 100
P A+R P P S R
Sbjct: 105 AQPPAQRPPGPAASSSAR 122
>gi|38683851 round spermatid basic protein 1 [Homo sapiens]
Length = 802
Score = 35.0 bits (79), Expect = 0.018
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 13/78 (16%)
Query: 47 GATPSGLRRGLHCREGPSDSGFQPHPGPPLSVPSGPLAP-----RARRHPNPLGMSVLRM 101
G +P G++R + S G Q G P P PLAP R+R+HP PL +
Sbjct: 79 GVSPRGVKR----QRRSSSGGSQEKRGRPSQEP--PLAPPHRRRRSRQHPGPLPPT--NA 130
Query: 102 WHTRPGRAILLLLHPPQP 119
T PG LLL PP P
Sbjct: 131 APTVPGPVEPLLLPPPPP 148
Score = 26.9 bits (58), Expect = 4.9
Identities = 22/80 (27%), Positives = 27/80 (33%), Gaps = 8/80 (10%)
Query: 11 HEGSSPHKLSGGRTQESSGFSEAKGGHG-----APRHSASHGATPSGLRRGLHCRE---G 62
H G SP + R S G E +G AP H G + G
Sbjct: 77 HAGVSPRGVKRQRRSSSGGSQEKRGRPSQEPPLAPPHRRRRSRQHPGPLPPTNAAPTVPG 136
Query: 63 PSDSGFQPHPGPPLSVPSGP 82
P + P P PP P+GP
Sbjct: 137 PVEPLLLPPPPPPSLAPAGP 156
>gi|4758216 dishevelled 2 [Homo sapiens]
Length = 736
Score = 34.7 bits (78), Expect = 0.024
Identities = 36/121 (29%), Positives = 49/121 (40%), Gaps = 24/121 (19%)
Query: 13 GSSPHKLSGGRTQESSGFSEAKGGHG--------APRHSASHGATPSGLRRGLHCREGPS 64
GS+ + S G SSG + + GG G AP + G+ RG R G
Sbjct: 579 GSASSQHSEG--SRSSGSTRSDGGAGRTGRPEERAPESKSGSGSESEPSSRGGSLRRGGE 636
Query: 65 DSGFQPHPGPPLSVPSGPLAPRARRHPN------PLGMSVLRMWHTRPGRAILLLLHPPQ 118
SG GPP S S AP R HP P GM++ P +++++ PP
Sbjct: 637 ASG-TSDGGPPPSRGSTGGAPNLRAHPGLHPYGPPPGMAL-------PYNPMMVVMMPPP 688
Query: 119 P 119
P
Sbjct: 689 P 689
>gi|46249414 latent transforming growth factor beta binding protein
1 isoform LTBP-1L [Homo sapiens]
Length = 1722
Score = 34.3 bits (77), Expect = 0.031
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 30 FSEAKGGHGAPRHSASHGATPSGLRRGLHCREGPSDSGFQPHPGPPLSVPSGPLAPRARR 89
+S + GAP S + PS R G + G +P P PP P+ P P +
Sbjct: 62 YSRSSAAAGAP--SRASPGVPSERTRRTSKPGGAALQGLRPPPPPPPE-PARPAVPGGQL 118
Query: 90 HPNPLGMSVLRMWHTRPGRAIL 111
HPNP G + T+ GR ++
Sbjct: 119 HPNPGGHPAAAPF-TKQGRQVV 139
>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
Length = 548
Score = 34.3 bits (77), Expect = 0.031
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 11/69 (15%)
Query: 35 GGHGAPRHSASHGATP--SGLRRGLHCREG---PSDSGFQPHPGPPLS-----VPSGPLA 84
G HG P G+TP SG+ R LH +G P G P P PP S PSGPL
Sbjct: 440 GHHGPPPMDQYLGSTPVGSGVYR-LHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLP 498
Query: 85 PRARRHPNP 93
P ++ P
Sbjct: 499 PWQQQQQQP 507
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 34.3 bits (77), Expect = 0.031
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 11/69 (15%)
Query: 35 GGHGAPRHSASHGATP--SGLRRGLHCREG---PSDSGFQPHPGPPLS-----VPSGPLA 84
G HG P G+TP SG+ R LH +G P G P P PP S PSGPL
Sbjct: 440 GHHGPPPMDQYLGSTPVGSGVYR-LHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLP 498
Query: 85 PRARRHPNP 93
P ++ P
Sbjct: 499 PWQQQQQQP 507
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 34.3 bits (77), Expect = 0.031
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 11/69 (15%)
Query: 35 GGHGAPRHSASHGATP--SGLRRGLHCREG---PSDSGFQPHPGPPLS-----VPSGPLA 84
G HG P G+TP SG+ R LH +G P G P P PP S PSGPL
Sbjct: 440 GHHGPPPMDQYLGSTPVGSGVYR-LHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLP 498
Query: 85 PRARRHPNP 93
P ++ P
Sbjct: 499 PWQQQQQQP 507
>gi|239748415 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 33.9 bits (76), Expect = 0.040
Identities = 28/86 (32%), Positives = 32/86 (37%), Gaps = 9/86 (10%)
Query: 20 SGGRTQES-SGFSEAKGGHGAPRHSASHGATPSGLRRGLHCREGPSDSGFQPHP-----G 73
SG Q S S F + PR + G LR G SD +P P
Sbjct: 97 SGSAIQSSPSRFRRVPADNAGPRRQLAKGVP---LRPGAEPPAPASDPDLEPTPPGGLKS 153
Query: 74 PPLSVPSGPLAPRARRHPNPLGMSVL 99
PPL SG P RR N LG+ L
Sbjct: 154 PPLPCASGQGVPGTRRRQNKLGVETL 179
>gi|239742343 PREDICTED: hypothetical protein XP_002342497 [Homo
sapiens]
Length = 208
Score = 33.9 bits (76), Expect = 0.040
Identities = 28/86 (32%), Positives = 32/86 (37%), Gaps = 9/86 (10%)
Query: 20 SGGRTQES-SGFSEAKGGHGAPRHSASHGATPSGLRRGLHCREGPSDSGFQPHP-----G 73
SG Q S S F + PR + G LR G SD +P P
Sbjct: 97 SGSAIQSSPSRFRRVPADNAGPRRQLAKGVP---LRPGAEPPAPASDPDLEPTPPGGLKS 153
Query: 74 PPLSVPSGPLAPRARRHPNPLGMSVL 99
PPL SG P RR N LG+ L
Sbjct: 154 PPLPCASGQGVPGTRRRQNKLGVETL 179
>gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens]
Length = 602
Score = 33.5 bits (75), Expect = 0.052
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
Query: 33 AKGGHGAPRHSASHGATPSGLRRGLHCREGPSDSGFQPHPGPPLSVPSGPLAPRARRHP 91
+KGGHGA A+PS +G H G D +P P P P P AP ++HP
Sbjct: 9 SKGGHGA--------ASPS--EKGAHPSGGADDVAKKPPPAP--QQPPPPPAPHPQQHP 55
>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
sapiens]
Length = 1751
Score = 33.5 bits (75), Expect = 0.052
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 22 GRTQESSGFSEAKGGHGAPRHSASHGAT-PSGLRRGLHCREGPSDSGFQPHPGPPLSVPS 80
GRT + EA GAP H S GA P+G R P +G PGPP P
Sbjct: 965 GRTGQKGSLGEA----GAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPP--GPP 1018
Query: 81 GPLAP 85
GP P
Sbjct: 1019 GPGLP 1023
>gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Homo
sapiens]
Length = 1336
Score = 33.5 bits (75), Expect = 0.052
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 22 GRTQESSGFSEAKGGHGAPRHSASHGAT-PSGLRRGLHCREGPSDSGFQPHPGPPLSVPS 80
GRT + EA GAP H S GA P+G R P +G PGPP P
Sbjct: 550 GRTGQKGSLGEA----GAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPP--GPP 603
Query: 81 GPLAP 85
GP P
Sbjct: 604 GPGLP 608
>gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Homo
sapiens]
Length = 1516
Score = 33.5 bits (75), Expect = 0.052
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 22 GRTQESSGFSEAKGGHGAPRHSASHGAT-PSGLRRGLHCREGPSDSGFQPHPGPPLSVPS 80
GRT + EA GAP H S GA P+G R P +G PGPP P
Sbjct: 730 GRTGQKGSLGEA----GAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPP--GPP 783
Query: 81 GPLAP 85
GP P
Sbjct: 784 GPGLP 788
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 33.1 bits (74), Expect = 0.069
Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 30/114 (26%)
Query: 27 SSGFSEAKGGHGAPRHSASHGA-TPSGLRRGLHCREGPSDSGFQPHPGPPLSVPSGPLAP 85
SS E G G+PR +A+ GA TP G S+S HP PLS P +P
Sbjct: 72 SSSIPEPFGSRGSPRKAATDGADTPFGR----------SESAPTLHPYSPLSPKGRPSSP 121
Query: 86 RARRHPNP-------------------LGMSVLRMWHTRPGRAILLLLHPPQPW 120
R + P G S+ R RPG L PP P+
Sbjct: 122 RTPLYLQPDAYGSLDRATSPRPRAFDGAGSSLGRAPSPRPGPGPLRQQGPPTPF 175
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 33.1 bits (74), Expect = 0.069
Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 30/114 (26%)
Query: 27 SSGFSEAKGGHGAPRHSASHGA-TPSGLRRGLHCREGPSDSGFQPHPGPPLSVPSGPLAP 85
SS E G G+PR +A+ GA TP G S+S HP PLS P +P
Sbjct: 72 SSSIPEPFGSRGSPRKAATDGADTPFGR----------SESAPTLHPYSPLSPKGRPSSP 121
Query: 86 RARRHPNP-------------------LGMSVLRMWHTRPGRAILLLLHPPQPW 120
R + P G S+ R RPG L PP P+
Sbjct: 122 RTPLYLQPDAYGSLDRATSPRPRAFDGAGSSLGRAPSPRPGPGPLRQQGPPTPF 175
>gi|239753856 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 33.1 bits (74), Expect = 0.069
Identities = 28/86 (32%), Positives = 31/86 (36%), Gaps = 9/86 (10%)
Query: 20 SGGRTQES-SGFSEAKGGHGAPRHSASHGATPSGLRRGLHCREGPSDSGFQPHP-----G 73
SG Q S S F + PR G LR G SD +P P
Sbjct: 97 SGSAIQSSPSRFRRVPADNAGPRRQLPKGVP---LRPGAEPPAPASDPDLEPTPPGGLKS 153
Query: 74 PPLSVPSGPLAPRARRHPNPLGMSVL 99
PPL SG P RR N LG+ L
Sbjct: 154 PPLPCASGQGVPGTRRRQNKLGVETL 179
>gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 33.1 bits (74), Expect = 0.069
Identities = 30/82 (36%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
Query: 13 GSSPHKLSGGRTQESSGFSEAKGGHGAPRHSASHGATPSGLRRGLHCREGPSDSGFQPHP 72
GSS SG Q + G A G A R S G G L RE P P P
Sbjct: 58 GSSGGGGSGSAGQPTLGSMLAVGS-AARRASERAGGRAGGT--ALRAREPPPP--LLPPP 112
Query: 73 GPPLSVPSGPLAPRARRHPNPL 94
PP P GP +PR P PL
Sbjct: 113 SPPQPGPKGPASPRPLPSPLPL 134
>gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isoform
B [Homo sapiens]
Length = 231
Score = 32.7 bits (73), Expect = 0.089
Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 29/89 (32%)
Query: 36 GHGAPRHSASHGATPSGLRRGLHCREGPSDSGFQPHPGPPLSVPSGPLAPRARRHPNPLG 95
G G P GA P G+ GP G +P GPP+ +P G P+G
Sbjct: 171 GRGGPPPPMGRGAPPPGMM-------GPPP-GMRPPMGPPMGIPPG--------RGTPMG 214
Query: 96 MSVLRMWHTRPGRAILLLLHPPQPWIRGL 124
M PG + PP P +RGL
Sbjct: 215 M-------PPPG------MRPPPPGMRGL 230
>gi|239049540 FCH domain only 1 isoform c [Homo sapiens]
Length = 839
Score = 32.3 bits (72), Expect = 0.12
Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 9/64 (14%)
Query: 43 SASHGATPSGLRRGLHCREGPSDSGFQPHPGPPLSVPS---------GPLAPRARRHPNP 93
S+ SGL H GPS + P PG P S PS G AP P P
Sbjct: 417 SSPENVEDSGLDSPSHAAPGPSPDSWVPRPGTPQSPPSCRAPPPEARGIRAPPLPDSPQP 476
Query: 94 LGMS 97
L S
Sbjct: 477 LASS 480
>gi|239049457 FCH domain only 1 isoform b [Homo sapiens]
Length = 889
Score = 32.3 bits (72), Expect = 0.12
Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 9/64 (14%)
Query: 43 SASHGATPSGLRRGLHCREGPSDSGFQPHPGPPLSVPS---------GPLAPRARRHPNP 93
S+ SGL H GPS + P PG P S PS G AP P P
Sbjct: 467 SSPENVEDSGLDSPSHAAPGPSPDSWVPRPGTPQSPPSCRAPPPEARGIRAPPLPDSPQP 526
Query: 94 LGMS 97
L S
Sbjct: 527 LASS 530
>gi|29789054 FCH domain only 1 isoform b [Homo sapiens]
Length = 889
Score = 32.3 bits (72), Expect = 0.12
Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 9/64 (14%)
Query: 43 SASHGATPSGLRRGLHCREGPSDSGFQPHPGPPLSVPS---------GPLAPRARRHPNP 93
S+ SGL H GPS + P PG P S PS G AP P P
Sbjct: 467 SSPENVEDSGLDSPSHAAPGPSPDSWVPRPGTPQSPPSCRAPPPEARGIRAPPLPDSPQP 526
Query: 94 LGMS 97
L S
Sbjct: 527 LASS 530
>gi|239049440 FCH domain only 1 isoform a [Homo sapiens]
Length = 891
Score = 32.3 bits (72), Expect = 0.12
Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 9/64 (14%)
Query: 43 SASHGATPSGLRRGLHCREGPSDSGFQPHPGPPLSVPS---------GPLAPRARRHPNP 93
S+ SGL H GPS + P PG P S PS G AP P P
Sbjct: 467 SSPENVEDSGLDSPSHAAPGPSPDSWVPRPGTPQSPPSCRAPPPEARGIRAPPLPDSPQP 526
Query: 94 LGMS 97
L S
Sbjct: 527 LASS 530
>gi|189491748 ataxin 1 [Homo sapiens]
Length = 815
Score = 32.3 bits (72), Expect = 0.12
Identities = 18/58 (31%), Positives = 24/58 (41%)
Query: 36 GHGAPRHSASHGATPSGLRRGLHCREGPSDSGFQPHPGPPLSVPSGPLAPRARRHPNP 93
GHG RH + + GL++G+ + S P P SVP P A P P
Sbjct: 54 GHGGGRHGPAGTSVELGLQQGIGLHKALSTGLDYSPPSAPRSVPVATTLPAAYATPQP 111
>gi|51479158 ataxin 1 [Homo sapiens]
Length = 815
Score = 32.3 bits (72), Expect = 0.12
Identities = 18/58 (31%), Positives = 24/58 (41%)
Query: 36 GHGAPRHSASHGATPSGLRRGLHCREGPSDSGFQPHPGPPLSVPSGPLAPRARRHPNP 93
GHG RH + + GL++G+ + S P P SVP P A P P
Sbjct: 54 GHGGGRHGPAGTSVELGLQQGIGLHKALSTGLDYSPPSAPRSVPVATTLPAAYATPQP 111
>gi|14149904 anthrax toxin receptor 1 isoform 1 precursor [Homo
sapiens]
Length = 564
Score = 32.3 bits (72), Expect = 0.12
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 8/80 (10%)
Query: 22 GRTQESSGFSEAKGGHGA--PRHSASHGATPSGLR------RGLHCREGPSDSGFQPHPG 73
G T F+ K A P ++A H ++P HC P + P P
Sbjct: 476 GDTGRCINFTRVKNNQPAKYPLNNAYHTSSPPPAPIYTPPPPAPHCPPPPPSAPTPPIPS 535
Query: 74 PPLSVPSGPLAPRARRHPNP 93
PP ++P P AP R P P
Sbjct: 536 PPSTLPPPPQAPPPNRAPPP 555
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,793,184
Number of Sequences: 37866
Number of extensions: 498814
Number of successful extensions: 2969
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 264
Number of HSP's that attempted gapping in prelim test: 2583
Number of HSP's gapped (non-prelim): 627
length of query: 134
length of database: 18,247,518
effective HSP length: 91
effective length of query: 43
effective length of database: 14,801,712
effective search space: 636473616
effective search space used: 636473616
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.