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Search of human proteins with 22749021
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22749021 beta-1,3-N-acetylgalactosaminyltransferase 2 [Homo
sapiens]
(500 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22749021 beta-1,3-N-acetylgalactosaminyltransferase 2 [Homo s... 1041 0.0
gi|116268097 beta-1,3-galactosyltransferase 6 [Homo sapiens] 85 2e-16
gi|4502339 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 2 [... 75 2e-13
gi|10304987 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ... 74 4e-13
gi|15451877 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ... 66 6e-11
gi|15451875 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ... 66 6e-11
gi|84452146 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ... 66 6e-11
gi|15451879 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ... 66 6e-11
gi|4502343 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 [... 66 6e-11
gi|15451887 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ... 59 1e-08
gi|15451885 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ... 59 1e-08
gi|15451883 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ... 59 1e-08
gi|15451881 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ... 59 1e-08
gi|5174397 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 [... 59 1e-08
gi|4502341 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 4 [... 52 1e-06
gi|14042986 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran... 50 4e-06
gi|38348376 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran... 49 1e-05
gi|13540527 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran... 48 2e-05
gi|111160385 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra... 47 3e-05
gi|21687139 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran... 45 2e-04
gi|9845238 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltrans... 44 4e-04
gi|118918426 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra... 41 0.003
gi|239749659 PREDICTED: hypothetical protein XP_002347139 [Homo ... 40 0.005
gi|239743930 PREDICTED: hypothetical protein XP_002342992 [Homo ... 40 0.005
gi|92091604 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran... 36 0.093
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 30 5.1
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 30 5.1
gi|169165721 PREDICTED: similar to hCG1811563 [Homo sapiens] 30 6.7
gi|113415341 PREDICTED: similar to hCG1811563 [Homo sapiens] 30 6.7
gi|30795193 septin 10 isoform 2 [Homo sapiens] 29 8.7
>gi|22749021 beta-1,3-N-acetylgalactosaminyltransferase 2 [Homo
sapiens]
Length = 500
Score = 1041 bits (2691), Expect = 0.0
Identities = 500/500 (100%), Positives = 500/500 (100%)
Query: 1 MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPADQLALFPQWKSTHYDVVVGVLSA 60
MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPADQLALFPQWKSTHYDVVVGVLSA
Sbjct: 1 MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPADQLALFPQWKSTHYDVVVGVLSA 60
Query: 61 RNNHELRNVIRSTWMRHLLQHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNP 120
RNNHELRNVIRSTWMRHLLQHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNP
Sbjct: 61 RNNHELRNVIRSTWMRHLLQHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNP 120
Query: 121 VLNQEIEAFSLSEDTSSGLPEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLY 180
VLNQEIEAFSLSEDTSSGLPEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLY
Sbjct: 121 VLNQEIEAFSLSEDTSSGLPEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLY 180
Query: 181 QAEQEEALFIARFSPPSCGVQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHK 240
QAEQEEALFIARFSPPSCGVQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHK
Sbjct: 181 QAEQEEALFIARFSPPSCGVQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHK 240
Query: 241 VTVNDGGGVLRVITAGEGALPHEFLEGVEGVAGGFIYTIQEGDALLHNLHSRPQRLIDHI 300
VTVNDGGGVLRVITAGEGALPHEFLEGVEGVAGGFIYTIQEGDALLHNLHSRPQRLIDHI
Sbjct: 241 VTVNDGGGVLRVITAGEGALPHEFLEGVEGVAGGFIYTIQEGDALLHNLHSRPQRLIDHI 300
Query: 301 RNLHEEDALLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCY 360
RNLHEEDALLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCY
Sbjct: 301 RNLHEEDALLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCY 360
Query: 361 IDLEAVFNRIVQKNLDGPNFWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISK 420
IDLEAVFNRIVQKNLDGPNFWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISK
Sbjct: 361 IDLEAVFNRIVQKNLDGPNFWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISK 420
Query: 421 DIVKWLASNSGRLKTYQGEDVSMGIWMAAIGPKRYQDSLWLCEKTCETGMLSSPQYSPWE 480
DIVKWLASNSGRLKTYQGEDVSMGIWMAAIGPKRYQDSLWLCEKTCETGMLSSPQYSPWE
Sbjct: 421 DIVKWLASNSGRLKTYQGEDVSMGIWMAAIGPKRYQDSLWLCEKTCETGMLSSPQYSPWE 480
Query: 481 LTELWKLKERCGDPCRCQAR 500
LTELWKLKERCGDPCRCQAR
Sbjct: 481 LTELWKLKERCGDPCRCQAR 500
>gi|116268097 beta-1,3-galactosyltransferase 6 [Homo sapiens]
Length = 329
Score = 84.7 bits (208), Expect = 2e-16
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 305 EEDALLKEESSIYDDIVFVDVV-DTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCYIDL 363
EE L+ E + + D++ + + D Y N+ AK+L W E +F +LK DDD + L
Sbjct: 104 EERRALEREQARHGDLLLLPALRDAYENLTAKVLAMLAWLDEHVAFEFVLKADDDSFARL 163
Query: 364 EAVFNRI-VQKNLDGPNFWWGNFRLNWAVDRTGKWQELEYP-SPAYPAFACGSGYVISKD 421
+A+ + ++ +WG F V G+W+E + Y +A G GYV+S D
Sbjct: 164 DALLAELRAREPARRRRLYWGFFSGRGRVKPGGRWREAAWQLCDYYLPYALGGGYVLSAD 223
Query: 422 IVKWLASNSGRLKTYQGEDVSMGIWMAAIGPKRYQDSLWLCE---KTCETGMLSSPQYSP 478
+V +L + L+ + EDVS+G W+A + +R D + E + C L + + S
Sbjct: 224 LVHYLRLSRDYLRAWHSEDVSLGAWLAPVDVQREHDPRFDTEYRSRGCSNQYLVTHKQSL 283
Query: 479 WELTELWKLKERCGDPCR 496
++ E R G C+
Sbjct: 284 EDMLEKHATLAREGRLCK 301
>gi|4502339 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 2
[Homo sapiens]
Length = 422
Score = 74.7 bits (182), Expect = 2e-13
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 14/188 (7%)
Query: 312 EESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVE-TTSFNLLLKTDDDCYIDLEAVFNRI 370
EES Y DI+ + +DTY N+ K L W ++KTD D +++ E + N++
Sbjct: 207 EESRQYHDIIQQEYLDTYYNLTIKTLMGMNWVATYCPHIPYVMKTDSDMFVNTEYLINKL 266
Query: 371 VQKNLDGP-NFWWGNFRLNWAVDRT--GKWQELE--YPSPAYPAFACGSGYVISKDIVKW 425
++ +L N++ G +A +R KW YPS YP F G+GYV S D+ +
Sbjct: 267 LKPDLPPRHNYFTGYLMRGYAPNRNKDSKWYMPPDLYPSERYPVFCSGTGYVFSGDLAEK 326
Query: 426 LASNSGRLKTYQGEDVSMGIWMAAI------GPKRYQDSLW-LCEKTCE-TGMLSSPQYS 477
+ S ++ EDV +GI +A + P + + W + +C+ + +++S Q+
Sbjct: 327 IFKVSLGIRRLHLEDVYVGICLAKLRIDPVPPPNEFVFNHWRVSYSSCKYSHLITSHQFQ 386
Query: 478 PWELTELW 485
P EL + W
Sbjct: 387 PSELIKYW 394
>gi|10304987 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1
[Homo sapiens]
Length = 326
Score = 73.6 bits (179), Expect = 4e-13
Identities = 46/187 (24%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 309 LLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTS-FNLLLKTDDDCYIDLEAVF 367
++++ES I+ DI+ D +D+Y N+ K L RW S ++KTD D +++++ +
Sbjct: 129 MVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLI 188
Query: 368 NRIVQKNLDGPNFWWGNFRLNWAV--DRTGKWQELE--YPSPAYPAFACGSGYVISKDIV 423
++++ + ++ + +N D KW YP YP F G+GY+ S D+
Sbjct: 189 YKLLKPSTKPRRRYFTGYVINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVA 248
Query: 424 KWLASNSGRLKTYQGEDVSMGIWMAAIGPKRYQDSLW----LCEKTCE-TGMLSSPQYSP 478
+ + S + EDV +G+ + +G +Q+S + + C +++ Q SP
Sbjct: 249 ELIYKTSLHTRLLHLEDVYVGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQISP 308
Query: 479 WELTELW 485
E+ +W
Sbjct: 309 EEMHRIW 315
>gi|15451877 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1
[Homo sapiens]
Length = 331
Score = 66.2 bits (160), Expect = 6e-11
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 310 LKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVE-TTSFNLLLKTDDDCYIDLEAVFN 368
L++E +Y DI+ D +DTY N+ K + +RW E + ++KTD D +I+ +
Sbjct: 133 LEDEHLLYGDIIRQDFLDTYNNLTLKTIMAFRWVTEFCPNAKYVMKTDTDVFINTGNLVK 192
Query: 369 RIVQKNLDGPNFWWGNFRLNWAVDRTGKWQEL-----EYPSPAYPAFACGSGYVISKDIV 423
++ NL+ ++ + L G +Q+ EYP +P + G GY++S+D+V
Sbjct: 193 YLL--NLNHSEKFFTGYPLIDNYSYRGFYQKTHISYQEYPFKVFPPYCSGLGYIMSRDLV 250
Query: 424 KWLASNSGRLKTYQGEDVSMGI 445
+ G +K + EDV +GI
Sbjct: 251 PRIYEMMGHVKPIKFEDVYVGI 272
>gi|15451875 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1
[Homo sapiens]
Length = 331
Score = 66.2 bits (160), Expect = 6e-11
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 310 LKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVE-TTSFNLLLKTDDDCYIDLEAVFN 368
L++E +Y DI+ D +DTY N+ K + +RW E + ++KTD D +I+ +
Sbjct: 133 LEDEHLLYGDIIRQDFLDTYNNLTLKTIMAFRWVTEFCPNAKYVMKTDTDVFINTGNLVK 192
Query: 369 RIVQKNLDGPNFWWGNFRLNWAVDRTGKWQEL-----EYPSPAYPAFACGSGYVISKDIV 423
++ NL+ ++ + L G +Q+ EYP +P + G GY++S+D+V
Sbjct: 193 YLL--NLNHSEKFFTGYPLIDNYSYRGFYQKTHISYQEYPFKVFPPYCSGLGYIMSRDLV 250
Query: 424 KWLASNSGRLKTYQGEDVSMGI 445
+ G +K + EDV +GI
Sbjct: 251 PRIYEMMGHVKPIKFEDVYVGI 272
>gi|84452146 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1
[Homo sapiens]
Length = 331
Score = 66.2 bits (160), Expect = 6e-11
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 310 LKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVE-TTSFNLLLKTDDDCYIDLEAVFN 368
L++E +Y DI+ D +DTY N+ K + +RW E + ++KTD D +I+ +
Sbjct: 133 LEDEHLLYGDIIRQDFLDTYNNLTLKTIMAFRWVTEFCPNAKYVMKTDTDVFINTGNLVK 192
Query: 369 RIVQKNLDGPNFWWGNFRLNWAVDRTGKWQEL-----EYPSPAYPAFACGSGYVISKDIV 423
++ NL+ ++ + L G +Q+ EYP +P + G GY++S+D+V
Sbjct: 193 YLL--NLNHSEKFFTGYPLIDNYSYRGFYQKTHISYQEYPFKVFPPYCSGLGYIMSRDLV 250
Query: 424 KWLASNSGRLKTYQGEDVSMGI 445
+ G +K + EDV +GI
Sbjct: 251 PRIYEMMGHVKPIKFEDVYVGI 272
>gi|15451879 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1
[Homo sapiens]
Length = 331
Score = 66.2 bits (160), Expect = 6e-11
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 310 LKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVE-TTSFNLLLKTDDDCYIDLEAVFN 368
L++E +Y DI+ D +DTY N+ K + +RW E + ++KTD D +I+ +
Sbjct: 133 LEDEHLLYGDIIRQDFLDTYNNLTLKTIMAFRWVTEFCPNAKYVMKTDTDVFINTGNLVK 192
Query: 369 RIVQKNLDGPNFWWGNFRLNWAVDRTGKWQEL-----EYPSPAYPAFACGSGYVISKDIV 423
++ NL+ ++ + L G +Q+ EYP +P + G GY++S+D+V
Sbjct: 193 YLL--NLNHSEKFFTGYPLIDNYSYRGFYQKTHISYQEYPFKVFPPYCSGLGYIMSRDLV 250
Query: 424 KWLASNSGRLKTYQGEDVSMGI 445
+ G +K + EDV +GI
Sbjct: 251 PRIYEMMGHVKPIKFEDVYVGI 272
>gi|4502343 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1
[Homo sapiens]
Length = 331
Score = 66.2 bits (160), Expect = 6e-11
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 310 LKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVE-TTSFNLLLKTDDDCYIDLEAVFN 368
L++E +Y DI+ D +DTY N+ K + +RW E + ++KTD D +I+ +
Sbjct: 133 LEDEHLLYGDIIRQDFLDTYNNLTLKTIMAFRWVTEFCPNAKYVMKTDTDVFINTGNLVK 192
Query: 369 RIVQKNLDGPNFWWGNFRLNWAVDRTGKWQEL-----EYPSPAYPAFACGSGYVISKDIV 423
++ NL+ ++ + L G +Q+ EYP +P + G GY++S+D+V
Sbjct: 193 YLL--NLNHSEKFFTGYPLIDNYSYRGFYQKTHISYQEYPFKVFPPYCSGLGYIMSRDLV 250
Query: 424 KWLASNSGRLKTYQGEDVSMGI 445
+ G +K + EDV +GI
Sbjct: 251 PRIYEMMGHVKPIKFEDVYVGI 272
>gi|15451887 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5
[Homo sapiens]
Length = 310
Score = 58.5 bits (140), Expect = 1e-08
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 312 EESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVE-TTSFNLLLKTDDDCYIDLEAVFNRI 370
+ES + DI+ D +D Y N+ K + W ++KTD D +I+++ + +
Sbjct: 111 QESQRHGDIIQKDFLDVYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMFINVDYLTELL 170
Query: 371 VQKNLDGPNFWWGNFRLNWAVDRT--GKW--QELEYPSPAYPAFACGSGYVISKDIVKWL 426
++KN F+ G +LN R KW + EYP YP F G+GYV S D+ +
Sbjct: 171 LKKNRT-TRFFTGFLKLNEFPIRQPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQV 229
Query: 427 ASNSGRLKTYQGEDVSMGI 445
+ S + + EDV +G+
Sbjct: 230 YNVSKSVPYIKLEDVFVGL 248
>gi|15451885 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5
[Homo sapiens]
Length = 310
Score = 58.5 bits (140), Expect = 1e-08
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 312 EESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVE-TTSFNLLLKTDDDCYIDLEAVFNRI 370
+ES + DI+ D +D Y N+ K + W ++KTD D +I+++ + +
Sbjct: 111 QESQRHGDIIQKDFLDVYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMFINVDYLTELL 170
Query: 371 VQKNLDGPNFWWGNFRLNWAVDRT--GKW--QELEYPSPAYPAFACGSGYVISKDIVKWL 426
++KN F+ G +LN R KW + EYP YP F G+GYV S D+ +
Sbjct: 171 LKKNRT-TRFFTGFLKLNEFPIRQPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQV 229
Query: 427 ASNSGRLKTYQGEDVSMGI 445
+ S + + EDV +G+
Sbjct: 230 YNVSKSVPYIKLEDVFVGL 248
>gi|15451883 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5
[Homo sapiens]
Length = 310
Score = 58.5 bits (140), Expect = 1e-08
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 312 EESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVE-TTSFNLLLKTDDDCYIDLEAVFNRI 370
+ES + DI+ D +D Y N+ K + W ++KTD D +I+++ + +
Sbjct: 111 QESQRHGDIIQKDFLDVYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMFINVDYLTELL 170
Query: 371 VQKNLDGPNFWWGNFRLNWAVDRT--GKW--QELEYPSPAYPAFACGSGYVISKDIVKWL 426
++KN F+ G +LN R KW + EYP YP F G+GYV S D+ +
Sbjct: 171 LKKNRT-TRFFTGFLKLNEFPIRQPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQV 229
Query: 427 ASNSGRLKTYQGEDVSMGI 445
+ S + + EDV +G+
Sbjct: 230 YNVSKSVPYIKLEDVFVGL 248
>gi|15451881 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5
[Homo sapiens]
Length = 310
Score = 58.5 bits (140), Expect = 1e-08
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 312 EESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVE-TTSFNLLLKTDDDCYIDLEAVFNRI 370
+ES + DI+ D +D Y N+ K + W ++KTD D +I+++ + +
Sbjct: 111 QESQRHGDIIQKDFLDVYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMFINVDYLTELL 170
Query: 371 VQKNLDGPNFWWGNFRLNWAVDRT--GKW--QELEYPSPAYPAFACGSGYVISKDIVKWL 426
++KN F+ G +LN R KW + EYP YP F G+GYV S D+ +
Sbjct: 171 LKKNRT-TRFFTGFLKLNEFPIRQPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQV 229
Query: 427 ASNSGRLKTYQGEDVSMGI 445
+ S + + EDV +G+
Sbjct: 230 YNVSKSVPYIKLEDVFVGL 248
>gi|5174397 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5
[Homo sapiens]
Length = 310
Score = 58.5 bits (140), Expect = 1e-08
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 312 EESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVE-TTSFNLLLKTDDDCYIDLEAVFNRI 370
+ES + DI+ D +D Y N+ K + W ++KTD D +I+++ + +
Sbjct: 111 QESQRHGDIIQKDFLDVYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMFINVDYLTELL 170
Query: 371 VQKNLDGPNFWWGNFRLNWAVDRT--GKW--QELEYPSPAYPAFACGSGYVISKDIVKWL 426
++KN F+ G +LN R KW + EYP YP F G+GYV S D+ +
Sbjct: 171 LKKNRT-TRFFTGFLKLNEFPIRQPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQV 229
Query: 427 ASNSGRLKTYQGEDVSMGI 445
+ S + + EDV +G+
Sbjct: 230 YNVSKSVPYIKLEDVFVGL 248
>gi|4502341 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 4
[Homo sapiens]
Length = 378
Score = 52.0 bits (123), Expect = 1e-06
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 46/221 (20%)
Query: 310 LKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTSF-NLLLKTDDDCYIDLEAVFN 368
L ES+ DI+ D+YRN+ K L+ W + +LKTDDD Y+++ + +
Sbjct: 128 LASESAAQGDILQAAFQDSYRNLTLKTLSGLNWAEKHCPMARYVLKTDDDVYVNVPELVS 187
Query: 369 RIVQK--------------------------NLDGPNFWWGNFRLNWAVDRT----GKWQ 398
+V + + + P + G R++W V+ + G+ +
Sbjct: 188 ELVLRGGRWGQWERSTEPQREAEQEGGQVLHSEEVPLLYLG--RVHWRVNPSRTPGGRHR 245
Query: 399 ELEYPSP----AYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAIGPKR 454
E P +P +A G+GYV+S V+ + + R EDV +G+ A G
Sbjct: 246 VSEEQWPHTWGPFPPYASGTGYVLSASAVQLILKVASRAPLLPLEDVFVGV-SARRGGLA 304
Query: 455 YQDSLWLCEKT------CETG--MLSSPQYSPWELTELWKL 487
+ L T C G +L+S + PW++ E WKL
Sbjct: 305 PTQCVKLAGATHYPLDRCCYGKFLLTSHRLDPWKMQEAWKL 345
>gi|14042986 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 5 [Homo
sapiens]
Length = 378
Score = 50.4 bits (119), Expect = 4e-06
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Query: 313 ESSIYDDIVFVDVVDTYRNVPAKLLNFYRW-TVETTSFNLLLKTDDDCYIDLEAVFNRIV 371
E Y+DI+ D VD++ N+ KLL + W L+ DDD +I + + +
Sbjct: 149 EDQRYNDIIQQDFVDSFYNLTLKLLMQFSWANTYCPHAKFLMTADDDIFIHMPNLIEYLQ 208
Query: 372 Q-KNLDGPNFWWGNFRLNWAV--DRTGKW--QELEYPSPAYPAFACGSGYVISKDIVKWL 426
+ + +FW G D++ K+ Y PAYP + G+ YVIS D+ +
Sbjct: 209 SLEQIGVQDFWIGRVHRGAPPIRDKSSKYYVSYEMYQWPAYPDYTAGAAYVISGDVAAKV 268
Query: 427 ASNSGRL-KTYQGEDVSMGIWMAAIG 451
S L + +DV MG+ IG
Sbjct: 269 YEASQTLNSSLYIDDVFMGLCANKIG 294
>gi|38348376 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 8 [Homo
sapiens]
Length = 397
Score = 48.5 bits (114), Expect = 1e-05
Identities = 49/195 (25%), Positives = 81/195 (41%), Gaps = 17/195 (8%)
Query: 307 DALLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWT---VETTSFNLLLKTDDDCYIDL 363
D+L+ ES Y D++ D +D N K L W T SF +L+ DD ++
Sbjct: 196 DSLVAWESRRYSDLLLWDFLDVPFNQTLKDLLLLAWLGRHCPTVSF--VLRAQDDAFVHT 253
Query: 364 EAVFNRI-VQKNLDGPNFWWGN-FRLNWAVDRTGK--WQELEYPSPAYPAFACGSGYVIS 419
A+ + + + G F + + G + + YPA+A G GYVI+
Sbjct: 254 PALLAHLRALPPASARSLYLGEVFTQAMPLRKPGGPFYVPESFFEGGYPAYASGGGYVIA 313
Query: 420 KDIVKWLASNSGRLKTYQGEDVSMGIWMAAIG--PKRYQDSL--WLCEKTCE----TGML 471
+ WL + R+ + EDV G+ + A+G P+ + L W ++T + +L
Sbjct: 314 GRLAPWLLRAAARVAPFPFEDVYTGLCIRALGLVPQAHPGFLTAWPADRTADHCAFRNLL 373
Query: 472 SSPQYSPWELTELWK 486
P LWK
Sbjct: 374 LVRPLGPQASIRLWK 388
>gi|13540527 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 4 [Homo
sapiens]
Length = 378
Score = 47.8 bits (112), Expect = 2e-05
Identities = 55/209 (26%), Positives = 88/209 (42%), Gaps = 30/209 (14%)
Query: 309 LLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETT-SFNLLLKTDDDCYIDLEAVF 367
LL ES +DDI+ D + + N+ K L+ RW V + +LK DDD ++ + V
Sbjct: 170 LLAYESREFDDILQWDFTEDFFNLTLKELHLQRWVVAACPQAHFMLKGDDDVFVHVPNVL 229
Query: 368 NRIVQKNLDG----PNFWWGNFRLNWAVDRTGKWQELEYPS----PAYPAFACGSGYVIS 419
+ LDG + G+ +R K + PS YP +A G GYV+S
Sbjct: 230 -----EFLDGWDPAQDLLVGDVIRQALPNRNTKVKYFIPPSMYRATHYPPYAGGGGYVMS 284
Query: 420 KDIVKWLASNSGRLKTYQGEDVSMGIWMAAI-------------GPKRYQDSLWLCEKTC 466
+ V+ L + + + +DV +G+ + + G +R D L C
Sbjct: 285 RATVRRLQAIMEDAELFPIDDVFVGMCLRRLGLSPMHHAGFKTFGIRRPLDPLDPC---L 341
Query: 467 ETGMLSSPQYSPWELTELWKLKERCGDPC 495
G+L + SP E+ +W L G C
Sbjct: 342 YRGLLLVHRLSPLEMWTMWALVTDEGLKC 370
>gi|111160385 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 9 [Homo
sapiens]
Length = 402
Score = 47.4 bits (111), Expect = 3e-05
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 308 ALLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRW-TVETTSFNLLLKTDDDCYIDLEAV 366
ALL+ ES Y DI+ DT+ N+ K ++F W + + K D D ++++ +
Sbjct: 180 ALLRAESLAYADILLWAFDDTFFNLTLKEIHFLAWASAFCPDVRFVFKGDADVFVNVGNL 239
Query: 367 FNRIVQKNLDGPNFWWGNFRLNWAVDRTGKWQ----ELEYPSPAYPAFACGSGYVISKDI 422
+ ++ + G+ ++ RT + E Y PAYPA+A G G+V+S
Sbjct: 240 LEFLAPRD-PAQDLLAGDVIVHARPIRTRASKYYIPEAVYGLPAYPAYAGGGGFVLSGAT 298
Query: 423 VKWLASNSGRLKTYQGEDVSMGI 445
+ LA +++ + +DV +G+
Sbjct: 299 LHRLAGACAQVELFPIDDVFLGM 321
>gi|21687139 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 7 [Homo
sapiens]
Length = 401
Score = 45.1 bits (105), Expect = 2e-04
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 309 LLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRW-TVETTSFNLLLKTDDDCYID----L 363
LL E +Y DI+ +DT+ N+ K ++F +W + + K DDD +++ L
Sbjct: 192 LLAYEDRLYGDILQWGFLDTFFNLTLKEIHFLKWLDIYCPHVPFIFKGDDDVFVNPTNLL 251
Query: 364 EAVFNRIVQKNLDGPNFWWGNFRLNWAVDRTGKWQELE---YPSPAYPAFACGSGYVISK 420
E + +R Q+NL F + + R + Y +YP +A G G++++
Sbjct: 252 EFLADRQPQENL----FVGDVLQHARPIRRKDNKYYIPGALYGKASYPPYAGGGGFLMAG 307
Query: 421 DIVKWLASNSGRLKTYQGEDVSMGIWMAAIG 451
+ + L L+ Y +DV +G+ + +G
Sbjct: 308 SLARRLHHACDTLELYPIDDVFLGMCLEVLG 338
>gi|9845238 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 2 [Homo
sapiens]
Length = 397
Score = 43.5 bits (101), Expect = 4e-04
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 309 LLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRW-TVETTSFNLLLKTDDDCYIDLEAVF 367
+LK ES + DI+ + DT+ N+ K + F RW + + K DDD +++ +
Sbjct: 197 MLKFESEKHQDILMWNYRDTFFNLSLKEVLFLRWVSTSCPDTEFVFKGDDDVFVNTHHIL 256
Query: 368 NRIVQ-KNLDGPNFWWGNFRLNWAVDRTGKWQ----ELEYPSPAYPAFACGSGYVISKDI 422
N + + + G+ N R K + E+ Y S YP +A G G++ S +
Sbjct: 257 NYLNSLSKTKAKDLFIGDVIHNAGPHRDKKLKYYIPEVVY-SGLYPPYAGGGGFLYSGHL 315
Query: 423 VKWLASNSGRLKTYQGEDVSMGIWMAAIG 451
L + ++ Y +DV G+ + +G
Sbjct: 316 ALRLYHITDQVHLYPIDDVYTGMCLQKLG 344
>gi|118918426 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 6 [Homo
sapiens]
Length = 384
Score = 40.8 bits (94), Expect = 0.003
Identities = 42/200 (21%), Positives = 77/200 (38%), Gaps = 27/200 (13%)
Query: 309 LLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRW-TVETTSFNLLLKTDDDCYIDLEAVF 367
L+ E+ + D++ DT+ N+ K L+ W LL DDD ++ V
Sbjct: 174 LVALEAREHGDVLQWAFADTFLNLTLKHLHLLDWLAARCPHARFLLSGDDDVFVHTANVV 233
Query: 368 NRIVQKNLDGPNFWWGNFRLNWAVDRTGKWQELE-----YPSPAYPAFACGSGYVISKDI 422
R +Q G + + G + +V W + +P AYP + G G+++S
Sbjct: 234 -RFLQAQPPGRHLFSGQL-MEGSVPIRDSWSKYFVPPQLFPGSAYPVYCSGGGFLLSGPT 291
Query: 423 VKWLASNSGRLKTYQGEDVSMGIWMAAIG----------------PKRYQDSLWLCEKTC 466
+ L + + + +D MG+ + G P Q S C
Sbjct: 292 ARALRAAARHTPLFPIDDAYMGMCLERAGLAPSGHEGIRPFGVQLPGAQQSSFDPC---M 348
Query: 467 ETGMLSSPQYSPWELTELWK 486
+L +++P+E+ +WK
Sbjct: 349 YRELLLVHRFAPYEMLLMWK 368
>gi|239749659 PREDICTED: hypothetical protein XP_002347139 [Homo
sapiens]
Length = 369
Score = 40.0 bits (92), Expect = 0.005
Identities = 30/147 (20%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 310 LKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTSFNL-LLKTDDDCYIDLEAVFN 368
+ +ES +DI+ +D+ N K++ +W V L +LK D++ +++L ++ +
Sbjct: 136 INKESCKNNDIIEGIFLDSSENQTLKIIAMIQWAVAFCPNALFILKVDEETFVNLPSLVD 195
Query: 369 RIVQKNLDGPNFWWGNFRLNWAVDRTGKWQEL----EYPSPAYPAFACGSGYVISKDIVK 424
++ + + G +R + ++ EYP YP + G +++S+D+ +
Sbjct: 196 YLLNLKEHLEDIYVGRVLHQVTPNRDPQNRDFVPLSEYPEKYYPDYCSGEAFIMSQDVAR 255
Query: 425 WLASNSGRLKTYQGEDVSMGIWMAAIG 451
+ + DV +GI IG
Sbjct: 256 MMYVVFKEVPMMVPADVFVGICAKFIG 282
>gi|239743930 PREDICTED: hypothetical protein XP_002342992 [Homo
sapiens]
Length = 369
Score = 40.0 bits (92), Expect = 0.005
Identities = 30/147 (20%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 310 LKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTSFNL-LLKTDDDCYIDLEAVFN 368
+ +ES +DI+ +D+ N K++ +W V L +LK D++ +++L ++ +
Sbjct: 136 INKESCKNNDIIEGIFLDSSENQTLKIIAMIQWAVAFCPNALFILKVDEETFVNLPSLVD 195
Query: 369 RIVQKNLDGPNFWWGNFRLNWAVDRTGKWQEL----EYPSPAYPAFACGSGYVISKDIVK 424
++ + + G +R + ++ EYP YP + G +++S+D+ +
Sbjct: 196 YLLNLKEHLEDIYVGRVLHQVTPNRDPQNRDFVPLSEYPEKYYPDYCSGEAFIMSQDVAR 255
Query: 425 WLASNSGRLKTYQGEDVSMGIWMAAIG 451
+ + DV +GI IG
Sbjct: 256 MMYVVFKEVPMMVPADVFVGICAKFIG 282
>gi|92091604 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 3 [Homo
sapiens]
Length = 372
Score = 35.8 bits (81), Expect = 0.093
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 13/168 (7%)
Query: 296 LIDHIRNLHEE---DALLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRW-TVETTSFNL 351
L+ N HE + LL+ E+ + DI+ D D++ N+ K + F +W + +
Sbjct: 146 LVGTASNPHEARKVNRLLELEAQTHGDILQWDFHDSFFNLTLKQVLFLQWQETRCANASF 205
Query: 352 LLKTDDDCYIDLE-AVFNRIVQKNLDGPNFWWGNFRLNWAVDRTGKWQELEYP-----SP 405
+L DDD + + VF +Q + G + + G N R W + P +
Sbjct: 206 VLNGDDDVFAHTDNMVF--YLQDHDPGRHLFVGQLIQNVGPIR-AFWSKYYVPEVVTQNE 262
Query: 406 AYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAIGPK 453
YP + G G+++S+ L + L + +DV +G+ + G K
Sbjct: 263 RYPPYCGGGGFLLSRFTAAALRRAAHVLDIFPIDDVFLGMCLELEGLK 310
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 30.0 bits (66), Expect = 5.1
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 24/160 (15%)
Query: 115 LNITNPVLNQEIE-AFSLSEDTSSGLPEDRVVSVS--FRVLYPI------VITSLGVFYD 165
+N +P ++Q + ++SL+EDT G P VS++ +LY + + L ++
Sbjct: 474 VNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVT 533
Query: 166 ANDVG---FQRNITVKLYQAEQE----EALFIARFSPPSCGVQVNKLWYKP---VEQFIL 215
A+D G N+++ L+ +Q E L+ A + S GV++ +P V + +
Sbjct: 534 ASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVA 593
Query: 216 PESFEGTIVWESQDL-----HGLVSRNLHKVTVNDGGGVL 250
+ G W S L GL S LH V +L
Sbjct: 594 VDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALL 633
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 30.0 bits (66), Expect = 5.1
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 24/160 (15%)
Query: 115 LNITNPVLNQEIE-AFSLSEDTSSGLPEDRVVSVS--FRVLYPI------VITSLGVFYD 165
+N +P ++Q + ++SL+EDT G P VS++ +LY + + L ++
Sbjct: 474 VNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVT 533
Query: 166 ANDVG---FQRNITVKLYQAEQE----EALFIARFSPPSCGVQVNKLWYKP---VEQFIL 215
A+D G N+++ L+ +Q E L+ A + S GV++ +P V + +
Sbjct: 534 ASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVA 593
Query: 216 PESFEGTIVWESQDL-----HGLVSRNLHKVTVNDGGGVL 250
+ G W S L GL S LH V +L
Sbjct: 594 VDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALL 633
>gi|169165721 PREDICTED: similar to hCG1811563 [Homo sapiens]
Length = 322
Score = 29.6 bits (65), Expect = 6.7
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 50 HYDVVVGVLSARNNHELRNVIRSTWMRHLLQHPTLSQRVLVKFIIGAHGCEVPVEDREDP 109
H V LS RN IRSTW+R P S+ +GA + +R P
Sbjct: 35 HILAFVSCLSPLECKLQRNCIRSTWLR----RPRASRHTRTGICMGAQKFQDLTLERPGP 90
Query: 110 YSCKLLNIT 118
C+ ++IT
Sbjct: 91 GGCREVSIT 99
>gi|113415341 PREDICTED: similar to hCG1811563 [Homo sapiens]
Length = 322
Score = 29.6 bits (65), Expect = 6.7
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 50 HYDVVVGVLSARNNHELRNVIRSTWMRHLLQHPTLSQRVLVKFIIGAHGCEVPVEDREDP 109
H V LS RN IRSTW+R P S+ +GA + +R P
Sbjct: 35 HILAFVSCLSPLECKLQRNCIRSTWLR----RPRASRHTRTGICMGAQKFQDLTLERPGP 90
Query: 110 YSCKLLNIT 118
C+ ++IT
Sbjct: 91 GGCREVSIT 99
>gi|30795193 septin 10 isoform 2 [Homo sapiens]
Length = 431
Score = 29.3 bits (64), Expect = 8.7
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 275 FIYTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEE 313
F+ ++E +A+L Q +H++ LH+E+ + EE
Sbjct: 347 FVQRVKEKEAILKEAERELQAKFEHLKRLHQEERMKLEE 385
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,792,757
Number of Sequences: 37866
Number of extensions: 934977
Number of successful extensions: 2148
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2093
Number of HSP's gapped (non-prelim): 37
length of query: 500
length of database: 18,247,518
effective HSP length: 106
effective length of query: 394
effective length of database: 14,233,722
effective search space: 5608086468
effective search space used: 5608086468
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.