Guide to the Human Genome
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Search of human proteins with 22748751

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|22748751 solute carrier family 43, member 2 [Homo sapiens]
         (569 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22748751 solute carrier family 43, member 2 [Homo sapiens]        1139   0.0  
gi|4505971 solute carrier family 43, member 1 [Homo sapiens]          636   0.0  
gi|46410929 solute carrier family 43, member 3 [Homo sapiens]         206   6e-53
gi|41056259 solute carrier family 43, member 3 [Homo sapiens]         206   6e-53
gi|18252047 solute carrier family 43, member 3 [Homo sapiens]         206   6e-53
gi|93277088 mediator of RNA polymerase II transcription, subunit...    35   0.24 
gi|32401447 solute carrier family 46, member 3 isoform a [Homo s...    33   0.92 
gi|209571533 solute carrier family 46, member 3 isoform b [Homo ...    33   0.92 
gi|239752990 PREDICTED: hypothetical protein [Homo sapiens]            32   1.6  
gi|239741428 PREDICTED: hypothetical protein [Homo sapiens]            32   1.6  
gi|4502889 ceroid-lipofuscinosis, neuronal 3 [Homo sapiens]            32   2.0  
gi|109698601 ceroid-lipofuscinosis, neuronal 3 [Homo sapiens]          32   2.0  
gi|239747554 PREDICTED: hypothetical protein [Homo sapiens]            32   2.0  
gi|153792268 G protein-coupled receptor 31 [Homo sapiens]              32   2.0  
gi|166706877 erythrocyte membrane protein band 4.9 isoform 1 [Ho...    30   4.6  
gi|166706885 erythrocyte membrane protein band 4.9 isoform 3 [Ho...    30   4.6  
gi|166706883 erythrocyte membrane protein band 4.9 isoform 2 [Ho...    30   4.6  
gi|166706881 erythrocyte membrane protein band 4.9 isoform 2 [Ho...    30   4.6  
gi|166706879 erythrocyte membrane protein band 4.9 isoform 1 [Ho...    30   4.6  
gi|166706875 erythrocyte membrane protein band 4.9 isoform 1 [Ho...    30   4.6  
gi|154091328 chemokine (C-C motif) receptor 5 [Homo sapiens]           30   5.9  
gi|4502639 chemokine (C-C motif) receptor 5 [Homo sapiens]             30   5.9  
gi|110347429 mediator complex subunit 12 [Homo sapiens]                30   5.9  
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi...    30   7.8  
gi|47271392 succinate receptor 1 [Homo sapiens]                        30   7.8  
gi|110431368 ectonucleoside triphosphate diphosphohydrolase 8 is...    30   7.8  
gi|110431366 ectonucleoside triphosphate diphosphohydrolase 8 is...    30   7.8  

>gi|22748751 solute carrier family 43, member 2 [Homo sapiens]
          Length = 569

 Score = 1139 bits (2946), Expect = 0.0
 Identities = 569/569 (100%), Positives = 569/569 (100%)

Query: 1   MAPTLATAHRRRWWMACTAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGT 60
           MAPTLATAHRRRWWMACTAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGT
Sbjct: 1   MAPTLATAHRRRWWMACTAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGT 60

Query: 61  VGGTAEPGHEEVSWMNGWLSCQAQDEMLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRL 120
           VGGTAEPGHEEVSWMNGWLSCQAQDEMLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRL
Sbjct: 61  VGGTAEPGHEEVSWMNGWLSCQAQDEMLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRL 120

Query: 121 LGSACFAVSCLLIAYGASKPNALSVLIFIALALNGFGGMCMTFTSLTLPNMFGDLRSTFI 180
           LGSACFAVSCLLIAYGASKPNALSVLIFIALALNGFGGMCMTFTSLTLPNMFGDLRSTFI
Sbjct: 121 LGSACFAVSCLLIAYGASKPNALSVLIFIALALNGFGGMCMTFTSLTLPNMFGDLRSTFI 180

Query: 181 ALMIGSYASSAVTFPGIKLIYDAGVSFIVVLVVWAGCSGLVFLNCFFNWPLEPFPGPEDM 240
           ALMIGSYASSAVTFPGIKLIYDAGVSFIVVLVVWAGCSGLVFLNCFFNWPLEPFPGPEDM
Sbjct: 181 ALMIGSYASSAVTFPGIKLIYDAGVSFIVVLVVWAGCSGLVFLNCFFNWPLEPFPGPEDM 240

Query: 241 DYSVKIKFSWLGFDHKITGKQFYKQVTTVGRRLSVGSSMRSAKEQVALQEGHKLCLSTVD 300
           DYSVKIKFSWLGFDHKITGKQFYKQVTTVGRRLSVGSSMRSAKEQVALQEGHKLCLSTVD
Sbjct: 241 DYSVKIKFSWLGFDHKITGKQFYKQVTTVGRRLSVGSSMRSAKEQVALQEGHKLCLSTVD 300

Query: 301 LEVKCQPDAAVAPSFMHSVFSPILLLSLVTMCVTQLRLIFYMGAMNNILKFLVSGDQKTV 360
           LEVKCQPDAAVAPSFMHSVFSPILLLSLVTMCVTQLRLIFYMGAMNNILKFLVSGDQKTV
Sbjct: 301 LEVKCQPDAAVAPSFMHSVFSPILLLSLVTMCVTQLRLIFYMGAMNNILKFLVSGDQKTV 360

Query: 361 GLYTSIFGVLQLLCLLTAPVIGYIMDWRLKECEDASEEPEEKDANQGEKKKKKRDRQIQK 420
           GLYTSIFGVLQLLCLLTAPVIGYIMDWRLKECEDASEEPEEKDANQGEKKKKKRDRQIQK
Sbjct: 361 GLYTSIFGVLQLLCLLTAPVIGYIMDWRLKECEDASEEPEEKDANQGEKKKKKRDRQIQK 420

Query: 421 ITNAMRAFAFTNLLLVGFGVTCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQ 480
           ITNAMRAFAFTNLLLVGFGVTCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQ
Sbjct: 421 ITNAMRAFAFTNLLLVGFGVTCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQ 480

Query: 481 FGSLTGLQSLISALFALLQQPLFLAMMGPLQGDPLWVNVGLLLLSLLGFCLPLYLICYRR 540
           FGSLTGLQSLISALFALLQQPLFLAMMGPLQGDPLWVNVGLLLLSLLGFCLPLYLICYRR
Sbjct: 481 FGSLTGLQSLISALFALLQQPLFLAMMGPLQGDPLWVNVGLLLLSLLGFCLPLYLICYRR 540

Query: 541 QLERQLQQRQEDDKLFLKINGSSNQEAFV 569
           QLERQLQQRQEDDKLFLKINGSSNQEAFV
Sbjct: 541 QLERQLQQRQEDDKLFLKINGSSNQEAFV 569


>gi|4505971 solute carrier family 43, member 1 [Homo sapiens]
          Length = 559

 Score =  636 bits (1640), Expect = 0.0
 Identities = 330/560 (58%), Positives = 412/560 (73%), Gaps = 35/560 (6%)

Query: 1   MAPTLATAHRRRWWMACTAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGT 60
           MAPTL  A+RRRWWMACTAVLENL FSAVLLGWGSLLI+LK+EGFYS  C   E+ TN T
Sbjct: 1   MAPTLQQAYRRRWWMACTAVLENLFFSAVLLGWGSLLIILKNEGFYSSTCPA-ESSTNTT 59

Query: 61  VGGTAEPGHEEVSWMNGWLSCQAQDEMLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRL 120
                    +E      W  C  QDEMLNL FT+GSF+LSA TLPLGI+MD++GPR +RL
Sbjct: 60  --------QDE---QRRWPGCDQQDEMLNLGFTIGSFVLSATTLPLGILMDRFGPRPVRL 108

Query: 121 LGSACFAVSCLLIAYGASKPNALSVLIFIALALNGFGGMCMTFTSLTLPNMFGDLRSTFI 180
           +GSACF  SC L+A  +    ALS LIF+AL+LNGFGG+C+TFTSLTLPNMFG+LRST +
Sbjct: 109 VGSACFTASCTLMALASRDVEALSPLIFLALSLNGFGGICLTFTSLTLPNMFGNLRSTLM 168

Query: 181 ALMIGSYASSAVTFPGIKLIYDAGVSFIVVLVVWAGCSGLVFLNCFFNWPLEPFPGPEDM 240
           ALMIGSYASSA+TFPGIKLIYDAGV+F+V++  W+G + L+FLNC  NWP+E FP PE++
Sbjct: 169 ALMIGSYASSAITFPGIKLIYDAGVAFVVIMFTWSGLACLIFLNCTLNWPIEAFPAPEEV 228

Query: 241 DYSVKIKFSWLGFDHKITGKQFYKQVTTVGRRLSVGSSMRSAKEQVALQEGHKLCLSTVD 300
           +Y+ KIK S L  DHK+TG  FY  VTT+G+RLS        ++  +L++G    +S  D
Sbjct: 229 NYTKKIKLSGLALDHKVTGDLFYTHVTTMGQRLS--------QKAPSLEDGSDAFMSPQD 280

Query: 301 LEVKCQPDAAVAPSFMHSVFSPILLLSLVTMCVTQLRLIFYMGAMNNILKFLVSGDQ--- 357
           +    +     +     S+ SP  L SL+TM +TQLR+IFYM A+N +L++LV+G Q   
Sbjct: 281 VRGTSENLPERSVPLRKSLCSPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHE 340

Query: 358 ---------KTVGLYTSIFGVLQLLCLLTAPVIGYIMDWRLKECEDA-SEEPEEKDANQG 407
                    +TVG Y+S+FG +QLLCLLT P+IGYIMDWR+K+C DA ++     DA  G
Sbjct: 341 TNEQQQKVAETVGFYSSVFGAMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDG 400

Query: 408 EKKKKKRDR--QIQKITNAMRAFAFTNLLLVGFGVTCLIPNLPLQILSFILHTIVRGFIH 465
              K  R R  +IQK+TNA+ AF  TNLLLVGFG+TCLI NL LQ ++F+LHTIVRGF H
Sbjct: 401 VATKSIRPRYCKIQKLTNAISAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFH 460

Query: 466 SAVGGLYAAVYPSTQFGSLTGLQSLISALFALLQQPLFLAMMGPLQGDPLWVNVGLLLLS 525
           SA G LYAAV+PS  FG+LTGLQSLISA+FALLQQPLF+AM+GPL+G+P WVN+GLLL S
Sbjct: 461 SACGSLYAAVFPSNHFGTLTGLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFS 520

Query: 526 LLGFCLPLYLICYRRQLERQ 545
           LLGF LP YL  YR +L+++
Sbjct: 521 LLGFLLPSYLFYYRARLQQE 540


>gi|46410929 solute carrier family 43, member 3 [Homo sapiens]
          Length = 491

 Score =  206 bits (523), Expect = 6e-53
 Identities = 160/515 (31%), Positives = 239/515 (46%), Gaps = 56/515 (10%)

Query: 18  TAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGTVGGTAEPGHEEVSWMNG 77
           T +LE L F+ VL GW SL+ + K+E ++  LC  P+    G   G A+           
Sbjct: 15  TGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCG-PDAGPIGNATGQAD----------- 62

Query: 78  WLSCQAQDEMLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCLLIAYGA 137
              C+AQDE  +L FT+GSF+ + +T P G + D++     RL+    +  + L+IA+ +
Sbjct: 63  ---CKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTS 119

Query: 138 SKPNALSVLIFIALALNGFGGMCMTFTSLTLPNMFGDLRSTFIALMIGSYASSAVTFPGI 197
           +     +VL+F+A+ +   GG+    T+L + N+FG  RST I L  G++ SS+  F  I
Sbjct: 120 A---GSAVLLFLAMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLII 176

Query: 198 KLIYDAGVSFIVVLVVWAGCSGLVFLNCFFNWPLEPFPGPEDMDYSVKIKFSWLGFDHKI 257
           KL+Y+ G+S     +  + CS       F   P    P P   +YS  +           
Sbjct: 177 KLLYEKGISLRASFIFISVCSTWHVARTFLLMPRGHIPYPLPPNYSYGL------CPGNG 230

Query: 258 TGKQFYKQVTTVGRRLSVGSSMRSAKEQVALQEGHKLCLSTVDLEVKCQPDAAVAPSFMH 317
           T K+  +      R L       SAKE+     G K  L                 SF  
Sbjct: 231 TTKEEKETAEHENRELQ-SKEFLSAKEETP-GAGQKQELR----------------SFWS 272

Query: 318 SVFSPILLLSLVTMCVTQLRLIFYMGAMNNILKFLVSGDQKTVGLYTSIFGVLQLLCLLT 377
             FS      LV + V QL    ++G +N++L  +  GD   V  YT+ F   Q   +L 
Sbjct: 273 YAFSRRFAWHLVWLSVIQLWHYLFIGTLNSLLTNMAGGDMARVSTYTNAFAFTQ-FGVLC 331

Query: 378 APVIGYIMDWRLKECEDASEEPEEKDANQGEKKKKKRDRQIQKITNAMRAFAFTNLLLVG 437
           AP  G +MD RLK+              Q E +K         + + + + A T+LL +G
Sbjct: 332 APWNGLLMD-RLKQ------------KYQKEARKTGSSTLAVALCSTVPSLALTSLLCLG 378

Query: 438 FGVTCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGSLTGLQSLISALFAL 497
           F +   +P LPLQ L+FIL  I R F++ +        +PS  FG L GL   +SA+ +L
Sbjct: 379 FALCASVPILPLQYLTFILQVISRSFLYGSNAAFLTLAFPSEHFGKLFGLVMALSAVVSL 438

Query: 498 LQQPLFLAMMGPLQGDPLWVNVGLLLLSLLGFCLP 532
           LQ P+F  + G LQ DP +VNV  +L  LL F  P
Sbjct: 439 LQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHP 473


>gi|41056259 solute carrier family 43, member 3 [Homo sapiens]
          Length = 491

 Score =  206 bits (523), Expect = 6e-53
 Identities = 160/515 (31%), Positives = 239/515 (46%), Gaps = 56/515 (10%)

Query: 18  TAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGTVGGTAEPGHEEVSWMNG 77
           T +LE L F+ VL GW SL+ + K+E ++  LC  P+    G   G A+           
Sbjct: 15  TGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCG-PDAGPIGNATGQAD----------- 62

Query: 78  WLSCQAQDEMLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCLLIAYGA 137
              C+AQDE  +L FT+GSF+ + +T P G + D++     RL+    +  + L+IA+ +
Sbjct: 63  ---CKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTS 119

Query: 138 SKPNALSVLIFIALALNGFGGMCMTFTSLTLPNMFGDLRSTFIALMIGSYASSAVTFPGI 197
           +     +VL+F+A+ +   GG+    T+L + N+FG  RST I L  G++ SS+  F  I
Sbjct: 120 A---GSAVLLFLAMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLII 176

Query: 198 KLIYDAGVSFIVVLVVWAGCSGLVFLNCFFNWPLEPFPGPEDMDYSVKIKFSWLGFDHKI 257
           KL+Y+ G+S     +  + CS       F   P    P P   +YS  +           
Sbjct: 177 KLLYEKGISLRASFIFISVCSTWHVARTFLLMPRGHIPYPLPPNYSYGL------CPGNG 230

Query: 258 TGKQFYKQVTTVGRRLSVGSSMRSAKEQVALQEGHKLCLSTVDLEVKCQPDAAVAPSFMH 317
           T K+  +      R L       SAKE+     G K  L                 SF  
Sbjct: 231 TTKEEKETAEHENRELQ-SKEFLSAKEETP-GAGQKQELR----------------SFWS 272

Query: 318 SVFSPILLLSLVTMCVTQLRLIFYMGAMNNILKFLVSGDQKTVGLYTSIFGVLQLLCLLT 377
             FS      LV + V QL    ++G +N++L  +  GD   V  YT+ F   Q   +L 
Sbjct: 273 YAFSRRFAWHLVWLSVIQLWHYLFIGTLNSLLTNMAGGDMARVSTYTNAFAFTQ-FGVLC 331

Query: 378 APVIGYIMDWRLKECEDASEEPEEKDANQGEKKKKKRDRQIQKITNAMRAFAFTNLLLVG 437
           AP  G +MD RLK+              Q E +K         + + + + A T+LL +G
Sbjct: 332 APWNGLLMD-RLKQ------------KYQKEARKTGSSTLAVALCSTVPSLALTSLLCLG 378

Query: 438 FGVTCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGSLTGLQSLISALFAL 497
           F +   +P LPLQ L+FIL  I R F++ +        +PS  FG L GL   +SA+ +L
Sbjct: 379 FALCASVPILPLQYLTFILQVISRSFLYGSNAAFLTLAFPSEHFGKLFGLVMALSAVVSL 438

Query: 498 LQQPLFLAMMGPLQGDPLWVNVGLLLLSLLGFCLP 532
           LQ P+F  + G LQ DP +VNV  +L  LL F  P
Sbjct: 439 LQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHP 473


>gi|18252047 solute carrier family 43, member 3 [Homo sapiens]
          Length = 491

 Score =  206 bits (523), Expect = 6e-53
 Identities = 160/515 (31%), Positives = 239/515 (46%), Gaps = 56/515 (10%)

Query: 18  TAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGTVGGTAEPGHEEVSWMNG 77
           T +LE L F+ VL GW SL+ + K+E ++  LC  P+    G   G A+           
Sbjct: 15  TGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCG-PDAGPIGNATGQAD----------- 62

Query: 78  WLSCQAQDEMLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCLLIAYGA 137
              C+AQDE  +L FT+GSF+ + +T P G + D++     RL+    +  + L+IA+ +
Sbjct: 63  ---CKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTS 119

Query: 138 SKPNALSVLIFIALALNGFGGMCMTFTSLTLPNMFGDLRSTFIALMIGSYASSAVTFPGI 197
           +     +VL+F+A+ +   GG+    T+L + N+FG  RST I L  G++ SS+  F  I
Sbjct: 120 A---GSAVLLFLAMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLII 176

Query: 198 KLIYDAGVSFIVVLVVWAGCSGLVFLNCFFNWPLEPFPGPEDMDYSVKIKFSWLGFDHKI 257
           KL+Y+ G+S     +  + CS       F   P    P P   +YS  +           
Sbjct: 177 KLLYEKGISLRASFIFISVCSTWHVARTFLLMPRGHIPYPLPPNYSYGL------CPGNG 230

Query: 258 TGKQFYKQVTTVGRRLSVGSSMRSAKEQVALQEGHKLCLSTVDLEVKCQPDAAVAPSFMH 317
           T K+  +      R L       SAKE+     G K  L                 SF  
Sbjct: 231 TTKEEKETAEHENRELQ-SKEFLSAKEETP-GAGQKQELR----------------SFWS 272

Query: 318 SVFSPILLLSLVTMCVTQLRLIFYMGAMNNILKFLVSGDQKTVGLYTSIFGVLQLLCLLT 377
             FS      LV + V QL    ++G +N++L  +  GD   V  YT+ F   Q   +L 
Sbjct: 273 YAFSRRFAWHLVWLSVIQLWHYLFIGTLNSLLTNMAGGDMARVSTYTNAFAFTQ-FGVLC 331

Query: 378 APVIGYIMDWRLKECEDASEEPEEKDANQGEKKKKKRDRQIQKITNAMRAFAFTNLLLVG 437
           AP  G +MD RLK+              Q E +K         + + + + A T+LL +G
Sbjct: 332 APWNGLLMD-RLKQ------------KYQKEARKTGSSTLAVALCSTVPSLALTSLLCLG 378

Query: 438 FGVTCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGSLTGLQSLISALFAL 497
           F +   +P LPLQ L+FIL  I R F++ +        +PS  FG L GL   +SA+ +L
Sbjct: 379 FALCASVPILPLQYLTFILQVISRSFLYGSNAAFLTLAFPSEHFGKLFGLVMALSAVVSL 438

Query: 498 LQQPLFLAMMGPLQGDPLWVNVGLLLLSLLGFCLP 532
           LQ P+F  + G LQ DP +VNV  +L  LL F  P
Sbjct: 439 LQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHP 473


>gi|93277088 mediator of RNA polymerase II transcription, subunit 12
            homolog (S. cerevisiae)-like [Homo sapiens]
          Length = 2145

 Score = 34.7 bits (78), Expect = 0.24
 Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 35/157 (22%)

Query: 346  NNILKFLVSGDQKTVGLYTSIFGVLQLLCLLTAPVIGYIMDWRLKECEDASEEPEEKDAN 405
            N I  FL S +++ V L      V  L+  L   V G ++         A+ E  EK  +
Sbjct: 1397 NGIKTFLSSSERRGVWL------VAPLIARLPTSVQGRVLK--------AAGEELEKGQH 1442

Query: 406  QGEKKKKKRDRQIQKITNAMRAFAFTNLLLVGF--------GVTCLIPNLPLQILS---- 453
             G   KK+RDRQ QK  + +    F +L+L           G+   + N   QILS    
Sbjct: 1443 LGSSSKKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLQNQVNQILSNWRE 1502

Query: 454  --FILHTIVRGFIHSA-------VGGLYAAVYPSTQF 481
              +      R  +H A       VGG++  V  STQ+
Sbjct: 1503 ERYQDDIKARQMMHEALQLRLNLVGGMFDTVQRSTQW 1539


>gi|32401447 solute carrier family 46, member 3 isoform a [Homo
           sapiens]
          Length = 461

 Score = 32.7 bits (73), Expect = 0.92
 Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 12/130 (9%)

Query: 424 AMRAFAFTNLLLVGFGVTCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGS 483
           AM AFA T L++    V  L   +P  +L  +L  +VR    +  G L+A +      G 
Sbjct: 340 AMTAFASTTLMMFLARVPFLFTIVPFSVLRSMLSKVVRS---TEQGTLFACIAFLETLGG 396

Query: 484 LTGLQSLISALFALLQQPLFLAMMGPLQGDPLWVNVGLLLLSLLGFCLPLYLICYRRQLE 543
           +T + +            ++ A +    G    ++ GLLLL  +  C+           E
Sbjct: 397 VTAVSTF---------NGIYSATVAWYPGFTFLLSAGLLLLPAISLCVVKCTSWNEGSYE 447

Query: 544 RQLQQRQEDD 553
             +Q+   +D
Sbjct: 448 LLIQEESSED 457


>gi|209571533 solute carrier family 46, member 3 isoform b [Homo
           sapiens]
          Length = 463

 Score = 32.7 bits (73), Expect = 0.92
 Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 12/130 (9%)

Query: 424 AMRAFAFTNLLLVGFGVTCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGS 483
           AM AFA T L++    V  L   +P  +L  +L  +VR    +  G L+A +      G 
Sbjct: 340 AMTAFASTTLMMFLARVPFLFTIVPFSVLRSMLSKVVRS---TEQGTLFACIAFLETLGG 396

Query: 484 LTGLQSLISALFALLQQPLFLAMMGPLQGDPLWVNVGLLLLSLLGFCLPLYLICYRRQLE 543
           +T + +            ++ A +    G    ++ GLLLL  +  C+           E
Sbjct: 397 VTAVSTF---------NGIYSATVAWYPGFTFLLSAGLLLLPAISLCVVKCTSWNEGSYE 447

Query: 544 RQLQQRQEDD 553
             +Q+   +D
Sbjct: 448 LLIQEESSED 457


>gi|239752990 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 360

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 6/82 (7%)

Query: 161 MTFTSLTLPNMFGDLRSTFIALMIGSYASSAVTFPGIKLIYDAGVSFIVVLVVWA----- 215
           +TFTS+   ++F  L S   + M+G+ +SS +  P   L+   GV F  VLV+ +     
Sbjct: 110 LTFTSVISGSLFFTL-SRGSSNMLGAASSSTLAGPSEGLVGPLGVCFSGVLVLLSSLASF 168

Query: 216 GCSGLVFLNCFFNWPLEPFPGP 237
            C G  FL    ++ +  FP P
Sbjct: 169 SCKGSFFLTFSSSFLVSVFPVP 190


>gi|239741428 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 360

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 6/82 (7%)

Query: 161 MTFTSLTLPNMFGDLRSTFIALMIGSYASSAVTFPGIKLIYDAGVSFIVVLVVWA----- 215
           +TFTS+   ++F  L S   + M+G+ +SS +  P   L+   GV F  VLV+ +     
Sbjct: 110 LTFTSVISGSLFFTL-SRGSSNMLGAASSSTLAGPSEGLVGPLGVCFSGVLVLLSSLASF 168

Query: 216 GCSGLVFLNCFFNWPLEPFPGP 237
            C G  FL    ++ +  FP P
Sbjct: 169 SCKGSFFLTFSSSFLVSVFPVP 190


>gi|4502889 ceroid-lipofuscinosis, neuronal 3 [Homo sapiens]
          Length = 438

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 5/70 (7%)

Query: 98  LLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCLLIAYGASKPNALSVLIFIALALNGFG 157
           L+  +  PLG+ +  Y PR L  +   C A S +L+A+  S   +L  ++F +++ +G G
Sbjct: 109 LVIKLLAPLGLHLLPYSPRVL--VSGICAAGSFVLVAFSHSVGTSLCGVVFASIS-SGLG 165

Query: 158 GMCMTFTSLT 167
              +TF SLT
Sbjct: 166 E--VTFLSLT 173


>gi|109698601 ceroid-lipofuscinosis, neuronal 3 [Homo sapiens]
          Length = 438

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 5/70 (7%)

Query: 98  LLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCLLIAYGASKPNALSVLIFIALALNGFG 157
           L+  +  PLG+ +  Y PR L  +   C A S +L+A+  S   +L  ++F +++ +G G
Sbjct: 109 LVIKLLAPLGLHLLPYSPRVL--VSGICAAGSFVLVAFSHSVGTSLCGVVFASIS-SGLG 165

Query: 158 GMCMTFTSLT 167
              +TF SLT
Sbjct: 166 E--VTFLSLT 173


>gi|239747554 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 360

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)

Query: 161 MTFTSLTLPNMFGDLRSTFIALMIGSYASSAVTFPGIKLIYDAGVSFIVVLVVWA----- 215
           +TFTS+   ++F  L S   + M+G+ +SS +  P   L+   G+ F  VLV+ +     
Sbjct: 110 LTFTSVISGSLFFTL-SRGSSNMLGAASSSTLAGPSEGLVGPLGICFSGVLVLLSSLASF 168

Query: 216 GCSGLVFLNCFFNWPLEPFPGP 237
            C G  FL    ++ +  FP P
Sbjct: 169 SCKGSFFLTFSSSFLVSVFPVP 190


>gi|153792268 G protein-coupled receptor 31 [Homo sapiens]
          Length = 319

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 7/92 (7%)

Query: 412 KKRDRQIQKITNAMRAFAFTNLLLVGFGVTCLIPNLPLQILSFILHTIVRGFIHSAVGGL 471
           +KR R+ +K     RA A   L++V F + C +P    ++L  I   +       +   L
Sbjct: 205 QKRLREPEKQPKLQRAQALVTLVVVLFAL-CFLPCFLARVLMHIFQNL------GSCRAL 257

Query: 472 YAAVYPSTQFGSLTGLQSLISALFALLQQPLF 503
            A  + S   GSLT L S+++ +      P F
Sbjct: 258 CAVAHTSDVTGSLTYLHSVLNPVVYCFSSPTF 289


>gi|166706877 erythrocyte membrane protein band 4.9 isoform 1 [Homo
           sapiens]
          Length = 405

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 386 DWRLKECE--DASEEPEEKDANQGEKKKKKRDRQIQKIT 422
           +WR ++     A EE EE+D + GE+ K  R+RQ ++++
Sbjct: 204 EWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREELS 242


>gi|166706885 erythrocyte membrane protein band 4.9 isoform 3 [Homo
           sapiens]
          Length = 358

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 386 DWRLKECE--DASEEPEEKDANQGEKKKKKRDRQIQKIT 422
           +WR ++     A EE EE+D + GE+ K  R+RQ ++++
Sbjct: 179 EWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREELS 217


>gi|166706883 erythrocyte membrane protein band 4.9 isoform 2 [Homo
           sapiens]
          Length = 383

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 386 DWRLKECE--DASEEPEEKDANQGEKKKKKRDRQIQKIT 422
           +WR ++     A EE EE+D + GE+ K  R+RQ ++++
Sbjct: 204 EWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREELS 242


>gi|166706881 erythrocyte membrane protein band 4.9 isoform 2 [Homo
           sapiens]
          Length = 383

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 386 DWRLKECE--DASEEPEEKDANQGEKKKKKRDRQIQKIT 422
           +WR ++     A EE EE+D + GE+ K  R+RQ ++++
Sbjct: 204 EWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREELS 242


>gi|166706879 erythrocyte membrane protein band 4.9 isoform 1 [Homo
           sapiens]
          Length = 405

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 386 DWRLKECE--DASEEPEEKDANQGEKKKKKRDRQIQKIT 422
           +WR ++     A EE EE+D + GE+ K  R+RQ ++++
Sbjct: 204 EWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREELS 242


>gi|166706875 erythrocyte membrane protein band 4.9 isoform 1 [Homo
           sapiens]
          Length = 405

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 386 DWRLKECE--DASEEPEEKDANQGEKKKKKRDRQIQKIT 422
           +WR ++     A EE EE+D + GE+ K  R+RQ ++++
Sbjct: 204 EWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREELS 242


>gi|154091328 chemokine (C-C motif) receptor 5 [Homo sapiens]
          Length = 352

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 15/114 (13%)

Query: 451 ILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGSLTGLQSLISALFALLQQPLFLAMMG-- 508
           I   IL TI R    + V  ++A    +  FG +T + + + A+FA L   +F       
Sbjct: 116 IFFIILLTIDRYL--AVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKEG 173

Query: 509 ---------PLQGDPLWVNVGLLLLSLLGFCLPL--YLICYRRQLERQLQQRQE 551
                    P      W N   L + +LG  LPL   +ICY   L+  L+ R E
Sbjct: 174 LHYTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNE 227


>gi|4502639 chemokine (C-C motif) receptor 5 [Homo sapiens]
          Length = 352

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 15/114 (13%)

Query: 451 ILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGSLTGLQSLISALFALLQQPLFLAMMG-- 508
           I   IL TI R    + V  ++A    +  FG +T + + + A+FA L   +F       
Sbjct: 116 IFFIILLTIDRYL--AVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKEG 173

Query: 509 ---------PLQGDPLWVNVGLLLLSLLGFCLPL--YLICYRRQLERQLQQRQE 551
                    P      W N   L + +LG  LPL   +ICY   L+  L+ R E
Sbjct: 174 LHYTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNE 227


>gi|110347429 mediator complex subunit 12 [Homo sapiens]
          Length = 2177

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 13/80 (16%)

Query: 364  TSIFGVLQLLCLLTAPVIGYIMDWRLKECEDASEEPEEKDANQGEKKKKKRDRQIQKITN 423
            + ++ V  L+  L   V G+++         A+ E  EK  + G   +K+RDRQ QK  +
Sbjct: 1423 SGVWLVAPLIAKLPTSVQGHVLK--------AAGEELEKGQHLGSSSRKERDRQKQKSMS 1474

Query: 424  AMRAFAFTNLLLVGFGVTCL 443
             +    F +L+L     TCL
Sbjct: 1475 LLSQQPFLSLVL-----TCL 1489


>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 123

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 12/30 (40%), Positives = 21/30 (70%)

Query: 388 RLKECEDASEEPEEKDANQGEKKKKKRDRQ 417
           R +E E+  EE EE++  +G ++KKK+ R+
Sbjct: 75  REEEEEEEEEEKEEEEKEEGRRRKKKKKRR 104


>gi|47271392 succinate receptor 1 [Homo sapiens]
          Length = 334

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 11/27 (40%), Positives = 20/27 (74%)

Query: 512 GDPLWVNVGLLLLSLLGFCLPLYLICY 538
           GDP +  +  + L+LLGF +PL+++C+
Sbjct: 179 GDPNYNLIYSMCLTLLGFLIPLFVMCF 205


>gi|110431368 ectonucleoside triphosphate diphosphohydrolase 8
           isoform 1 [Homo sapiens]
          Length = 495

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 26/124 (20%)

Query: 33  WGSLLIMLKSEGFYSYLCTEPENVTNGTVGGTAEPGHEEVSWMNGWLSCQAQDEMLNLAF 92
           WG+ L+  ++EG + ++     N   GT+         + S+   W+  Q  +EML  A 
Sbjct: 158 WGAELLAGQAEGAFGWITV---NYGLGTL--------VKYSFTGEWI--QPPEEMLVGAL 204

Query: 93  TVGSFLLSAITLPLGIVMDKYGPRKLRLLGS---------ACFA----VSCLLIAYGASK 139
            +G        +P G ++DK      RL GS          CF     +S LL+    S+
Sbjct: 205 DMGGASTQITFVPGGPILDKSTQADFRLYGSDYSVYTHSYLCFGRDQMLSRLLVGLVQSR 264

Query: 140 PNAL 143
           P AL
Sbjct: 265 PAAL 268


>gi|110431366 ectonucleoside triphosphate diphosphohydrolase 8
           isoform 2 [Homo sapiens]
          Length = 458

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 26/124 (20%)

Query: 33  WGSLLIMLKSEGFYSYLCTEPENVTNGTVGGTAEPGHEEVSWMNGWLSCQAQDEMLNLAF 92
           WG+ L+  ++EG + ++     N   GT+         + S+   W+  Q  +EML  A 
Sbjct: 158 WGAELLAGQAEGAFGWITV---NYGLGTL--------VKYSFTGEWI--QPPEEMLVGAL 204

Query: 93  TVGSFLLSAITLPLGIVMDKYGPRKLRLLGS---------ACFA----VSCLLIAYGASK 139
            +G        +P G ++DK      RL GS          CF     +S LL+    S+
Sbjct: 205 DMGGASTQITFVPGGPILDKSTQADFRLYGSDYSVYTHSYLCFGRDQMLSRLLVGLVQSR 264

Query: 140 PNAL 143
           P AL
Sbjct: 265 PAAL 268


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.140    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,904,492
Number of Sequences: 37866
Number of extensions: 895960
Number of successful extensions: 4276
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 4219
Number of HSP's gapped (non-prelim): 53
length of query: 569
length of database: 18,247,518
effective HSP length: 108
effective length of query: 461
effective length of database: 14,157,990
effective search space: 6526833390
effective search space used: 6526833390
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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