CLN3 28451

Name: CLN3	Sequence: fasta or formatted (438aa)		NCBI GI: 4502889
Description: ceroid-lipofuscinosis, neuronal 3		Referenced in: Lysosomes and Related Organelles
Other entries for this name: alt mRNA [438aa] ceroid-lipofuscinosis, neuronal 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 39 2 C cysteine 2.3 10 2 D aspartate 2.5 11 1 E glutamate 4.3 19 3 F phenylalanine 5.7 25 2 G glycine 8.2 36 2 H histidine 2.7 12 1 I isoleucine 4.1 18 2 K lysine 1.1 5 1 L leucine 16.7 73 3 M methionine 1.1 5 1 N asparagine 2.5 11 2 P proline 5.0 22 1 Q glutamine 3.2 14 2 R arginine 4.1 18 3 S serine 11.2 49 4 T threonine 4.6 20 1 V valine 6.2 27 3 W tryptophan 2.3 10 2 Y tyrosine 3.2 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ceroid-lipofuscinosis, neuronal 3 CLN3 1.000 ceroid-lipofuscinosis, neuronal 3 SLC29A2 0.013 solute carrier family 29 (nucleoside transporters), ... BIRC6 0.009 baculoviral IAP repeat-containing 6 DLG4 0.008 post-synaptic density protein 95 isoform 1 MICAL3 0.008 microtubule associated monoxygenase, calponin and L... SLC43A2 0.008 solute carrier family 43, member 2 LOC100288131 0.007 PREDICTED: hypothetical protein LOC100288131 0.007 PREDICTED: hypothetical protein XP_002343331 PCDH15 0.007 protocadherin 15 isoform CD2-1 precursor SASH1 0.006 SAM and SH3 domain containing 1 STARD3NL 0.006 MLN64 N-terminal homolog CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.005 calcium channel, voltage-dependent, L type, alpha 1... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.