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Search of human proteins with 226442744
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|226442744 hypothetical protein LOC643965 [Homo sapiens]
(163 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|226442744 hypothetical protein LOC643965 [Homo sapiens] 336 6e-93
gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo sap... 336 6e-93
gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo sap... 191 3e-49
gi|44662813 transmembrane protein 88 [Homo sapiens] 63 1e-10
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 41 4e-04
gi|169211438 PREDICTED: hypothetical protein [Homo sapiens] 37 0.006
gi|169211910 PREDICTED: hypothetical protein [Homo sapiens] 37 0.006
gi|169211055 PREDICTED: hypothetical protein [Homo sapiens] 37 0.006
gi|21450761 hypothetical protein LOC221908 [Homo sapiens] 37 0.010
gi|239749756 PREDICTED: hypothetical protein [Homo sapiens] 35 0.037
gi|239744015 PREDICTED: hypothetical protein XP_002343005 [Homo ... 35 0.037
gi|46909596 a disintegrin and metalloproteinase domain 15 isofor... 34 0.064
gi|46909590 a disintegrin and metalloproteinase domain 15 isofor... 34 0.064
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 33 0.084
gi|210032580 SET domain containing 1B [Homo sapiens] 33 0.084
gi|12056463 coagulation factor VIII-associated protein [Homo sap... 33 0.14
gi|14719400 ADP-ribosylation factor binding protein 3 isoform sh... 33 0.14
gi|20336267 ADP-ribosylation factor binding protein 3 isoform lo... 33 0.14
gi|56090586 coagulation factor VIII-associated (intronic transcr... 33 0.14
gi|56090588 coagulation factor VIII-associated (intronic transcr... 33 0.14
gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo sap... 32 0.19
gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo sap... 32 0.19
gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo sap... 32 0.19
gi|46909594 a disintegrin and metalloproteinase domain 15 isofor... 32 0.19
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s... 32 0.24
gi|222352129 von Willebrand factor A domain containing 5B2 [Homo... 32 0.32
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens] 32 0.32
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens] 32 0.32
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens] 32 0.32
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 32 0.32
>gi|226442744 hypothetical protein LOC643965 [Homo sapiens]
Length = 163
Score = 336 bits (861), Expect = 6e-93
Identities = 163/163 (100%), Positives = 163/163 (100%)
Query: 1 MSEQGRETEEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLL 60
MSEQGRETEEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLL
Sbjct: 1 MSEQGRETEEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLL 60
Query: 61 LPAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPLLV 120
LPAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPLLV
Sbjct: 61 LPAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPLLV 120
Query: 121 LASAVRARLARRLRPLLPPPAGTPGPRRPPGRPDEDEQLCAWV 163
LASAVRARLARRLRPLLPPPAGTPGPRRPPGRPDEDEQLCAWV
Sbjct: 121 LASAVRARLARRLRPLLPPPAGTPGPRRPPGRPDEDEQLCAWV 163
>gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo
sapiens]
Length = 487
Score = 336 bits (861), Expect = 6e-93
Identities = 163/163 (100%), Positives = 163/163 (100%)
Query: 1 MSEQGRETEEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLL 60
MSEQGRETEEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLL
Sbjct: 325 MSEQGRETEEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLL 384
Query: 61 LPAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPLLV 120
LPAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPLLV
Sbjct: 385 LPAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPLLV 444
Query: 121 LASAVRARLARRLRPLLPPPAGTPGPRRPPGRPDEDEQLCAWV 163
LASAVRARLARRLRPLLPPPAGTPGPRRPPGRPDEDEQLCAWV
Sbjct: 445 LASAVRARLARRLRPLLPPPAGTPGPRRPPGRPDEDEQLCAWV 487
>gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo
sapiens]
Length = 451
Score = 191 bits (484), Expect = 3e-49
Identities = 103/127 (81%), Positives = 107/127 (84%), Gaps = 6/127 (4%)
Query: 1 MSEQGRETEEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLL 60
MSEQGRETEEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLL
Sbjct: 325 MSEQGRETEEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLL 384
Query: 61 LPAAAFLLVLLPAAAVVYLGFLCHSR-VHPA----PGPRCRALFSDRGSAALIVFGLLSL 115
LPAAAFLLVLLPAAAVVYLGFLCHSR + PA PGP A FS +AA + +GL L
Sbjct: 385 LPAAAFLLVLLPAAAVVYLGFLCHSRGLQPASGQTPGPPAAAAFSVISTAAPVYWGLGGL 444
Query: 116 P-PLLVL 121
PL VL
Sbjct: 445 ARPLEVL 451
>gi|44662813 transmembrane protein 88 [Homo sapiens]
Length = 159
Score = 62.8 bits (151), Expect = 1e-10
Identities = 39/94 (41%), Positives = 49/94 (52%)
Query: 41 WSGPPLLPGRLLAGLLLHLLLPAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFS 100
W+ L+ + L +LLL +LLPA ++ GFLCHS+ + P C A
Sbjct: 25 WACAVLVTAQNLLVAAFNLLLLVLVLGTILLPAVTMLGFGFLCHSQFLRSQAPPCTAHLR 84
Query: 101 DRGSAALIVFGLLSLPPLLVLASAVRARLARRLR 134
D G AL+V G L L PLLVLA A RL RLR
Sbjct: 85 DPGFTALLVTGFLLLVPLLVLALASYRRLCLRLR 118
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 41.2 bits (95), Expect = 4e-04
Identities = 46/146 (31%), Positives = 57/146 (39%), Gaps = 33/146 (22%)
Query: 13 GGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGR------LLAGLL----LHLLLP 62
GGGG P+LP PG GPPL PG L+A LL LL P
Sbjct: 566 GGGGQPPPEPLLPP------------PGGPGPPLAPGEPEGPSLLVASLLPPPPSDLLPP 613
Query: 63 AAA----FLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPL 118
+A L LP A+ A GP FS G + ++F LS PP
Sbjct: 614 PSAPPSNLLASFLPLLALGPTAGDGEGSAEGAGGPSGEP-FSGLGDLSPLLFPPLSAPPT 672
Query: 119 LVLASAVRARLARRLRPLLPPPAGTP 144
L+ ++ L L PP+GTP
Sbjct: 673 LIALNSA------LLAATLDPPSGTP 692
Score = 31.2 bits (69), Expect = 0.41
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 135 PLLPPPAGTPGPRRPPGRPDEDEQLCA 161
PLLPPP G PGP PG P+ L A
Sbjct: 575 PLLPPPGG-PGPPLAPGEPEGPSLLVA 600
Score = 28.1 bits (61), Expect = 3.5
Identities = 42/158 (26%), Positives = 58/158 (36%), Gaps = 31/158 (19%)
Query: 16 GASDTAPMLPRG------PPDHQASALTCPGWSGPPLLPGRLLAGLLLHLLLPAAAFLLV 69
G S + LPRG PP A +L P ++ L L+ L P A+
Sbjct: 196 GGSSSPRFLPRGNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDLGSPPAPHASSSPP 255
Query: 70 LLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAAL-----------IVFGLLSLPPL 118
P F C + P P P L + G A+ +V G L P
Sbjct: 256 SDPPL------FHCSDALTPPPLPPSNNLPAHPGPASQPPVSSATMHLPLVLGPLGGAPT 309
Query: 119 L-------VLASAVRARLARRLRPLLPPPAGTPGPRRP 149
+ LAS++ + A+ P LPPP+ G RRP
Sbjct: 310 VEGPGAPPFLASSLLSAAAKAQHPPLPPPSTLQG-RRP 346
>gi|169211438 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 37.4 bits (85), Expect = 0.006
Identities = 52/153 (33%), Positives = 59/153 (38%), Gaps = 26/153 (16%)
Query: 4 QGRET--EEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLLL 61
+G ET E E G G P LP GP W G GR L G +
Sbjct: 16 EGSETRRELELGYRGTPRRPPPLPPGPQ----------AWRGEQRR-GRPLLGRAPRASV 64
Query: 62 PAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPL-LV 120
PA L V LG C SR P+ R RA ++ RG+ A G SL P L
Sbjct: 65 PAPRAFPNL------VTLGGGCASRPSPSSALRVRAGWAGRGAIA----GSPSLRPCDLG 114
Query: 121 LASAVRARLARRLRPLLPPPAGTPGPRRPPGRP 153
A RAR R+ PP P PR PG P
Sbjct: 115 ATEATRAR--PRIGCHSQPPRAAPKPRACPGFP 145
>gi|169211910 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 37.4 bits (85), Expect = 0.006
Identities = 52/153 (33%), Positives = 59/153 (38%), Gaps = 26/153 (16%)
Query: 4 QGRET--EEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLLL 61
+G ET E E G G P LP GP W G GR L G +
Sbjct: 16 EGSETRRELELGYRGTPRRPPPLPPGPQ----------AWRGEQRR-GRPLLGRAPRASV 64
Query: 62 PAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPL-LV 120
PA L V LG C SR P+ R RA ++ RG+ A G SL P L
Sbjct: 65 PAPRAFPNL------VTLGGGCASRPSPSSALRVRAGWAGRGAIA----GSPSLRPCDLG 114
Query: 121 LASAVRARLARRLRPLLPPPAGTPGPRRPPGRP 153
A RAR R+ PP P PR PG P
Sbjct: 115 ATEATRAR--PRIGCHSQPPRAAPKPRACPGFP 145
>gi|169211055 PREDICTED: hypothetical protein [Homo sapiens]
Length = 200
Score = 37.4 bits (85), Expect = 0.006
Identities = 52/153 (33%), Positives = 59/153 (38%), Gaps = 26/153 (16%)
Query: 4 QGRET--EEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLLL 61
+G ET E E G G P LP GP W G GR L G +
Sbjct: 16 EGSETRRELELGYRGTPRRPPPLPPGPQ----------AWRGEQRR-GRPLLGRAPRASV 64
Query: 62 PAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPL-LV 120
PA L V LG C SR P+ R RA ++ RG+ A G SL P L
Sbjct: 65 PAPRAFPNL------VTLGGGCASRPSPSSALRVRAGWAGRGAIA----GSPSLRPCDLG 114
Query: 121 LASAVRARLARRLRPLLPPPAGTPGPRRPPGRP 153
A RAR R+ PP P PR PG P
Sbjct: 115 ATEATRAR--PRIGCHSQPPRAAPKPRACPGFP 145
>gi|21450761 hypothetical protein LOC221908 [Homo sapiens]
Length = 253
Score = 36.6 bits (83), Expect = 0.010
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 13/68 (19%)
Query: 93 PRCRALFSDRGSAALIVFGLLSLPPLLVLASAVRARLARRLRPLLPPPAGTPGPRRPPGR 152
PR + LF D S L +P VL +A+R +LA LLPP A P P+ PPG
Sbjct: 155 PRSKRLFRDLVS--------LQVPEEQVLNAALREKLA-----LLPPQARAPHPKEPPGP 201
Query: 153 PDEDEQLC 160
+ LC
Sbjct: 202 GPDMTILC 209
>gi|239749756 PREDICTED: hypothetical protein [Homo sapiens]
Length = 385
Score = 34.7 bits (78), Expect = 0.037
Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 7 ETEEEEGGGGASDTAPMLPRGP-PDHQASALTCPGWSGPPLLPGRLLAGL 55
E + EG GG P PRG PD + P W PP LPGRLL L
Sbjct: 339 EDRDREGAGG-----PGQPRGSKPDGAGTPGLGPPWLWPPYLPGRLLPTL 383
>gi|239744015 PREDICTED: hypothetical protein XP_002343005 [Homo
sapiens]
Length = 385
Score = 34.7 bits (78), Expect = 0.037
Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 7 ETEEEEGGGGASDTAPMLPRGP-PDHQASALTCPGWSGPPLLPGRLLAGL 55
E + EG GG P PRG PD + P W PP LPGRLL L
Sbjct: 339 EDRDREGAGG-----PGQPRGSKPDGAGTPGLGPPWLWPPYLPGRLLPTL 383
>gi|46909596 a disintegrin and metalloproteinase domain 15 isoform 4
preproprotein [Homo sapiens]
Length = 838
Score = 33.9 bits (76), Expect = 0.064
Identities = 37/132 (28%), Positives = 49/132 (37%), Gaps = 24/132 (18%)
Query: 40 GWSGPPLLP-----GRLLAGLLLHLLLPAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPR 94
GW+ P L GLLL LL+ LLVL+ A + H R+ GP
Sbjct: 678 GWAPPDCTTQLKATSSLTTGLLLSLLV-----LLVLVMLGASYWYRARLHQRLCQLKGPT 732
Query: 95 CRALFSDRGSA--------ALIVFGLLSL------PPLLVLASAVRARLARRLRPLLPPP 140
C+ + G + AL+ G + PP L + R + P PPP
Sbjct: 733 CQYRAAQSGPSERPGPPQRALLARGTKAELADRPNPPTRPLPADPVVRSPKSQGPAKPPP 792
Query: 141 AGTPGPRRPPGR 152
P P P GR
Sbjct: 793 PRKPLPADPQGR 804
>gi|46909590 a disintegrin and metalloproteinase domain 15 isoform 2
preproprotein [Homo sapiens]
Length = 814
Score = 33.9 bits (76), Expect = 0.064
Identities = 35/118 (29%), Positives = 45/118 (38%), Gaps = 20/118 (16%)
Query: 40 GWSGPPLLP-----GRLLAGLLLHLLLPAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPR 94
GW+ P L GLLL LL+ LLVL+ A + H R+ GP
Sbjct: 678 GWAPPDCTTQLKATSSLTTGLLLSLLV-----LLVLVMLGASYWYRARLHQRLCQLKGPT 732
Query: 95 CRALFSDRGSAALIVFGLLSLPPLLVLASAVRARLARRLRPLLPPPAGTPGPRRPPGR 152
C+ + G + PP A+ AR + P PPP P P P GR
Sbjct: 733 CQYRAAQSGPSER------PGPP----QRALLARGTKSQGPAKPPPPRKPLPADPQGR 780
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 33.5 bits (75), Expect = 0.084
Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 11/75 (14%)
Query: 87 VHPAPGP-------RCRALFSDRGSAALIVFGL-LSLPPLLVLASAVRARLARRLRPLLP 138
VH + GP RCR + G G S+PP + + RR + L
Sbjct: 13 VHSSRGPAHYEMLGRCRMVCDPHGPRGPGPDGAPASVPPF---PPGAKGEVGRRGKAGLR 69
Query: 139 PPAGTPGPRRPPGRP 153
P G PGPR PPG P
Sbjct: 70 GPPGPPGPRGPPGEP 84
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 33.5 bits (75), Expect = 0.084
Identities = 43/151 (28%), Positives = 57/151 (37%), Gaps = 14/151 (9%)
Query: 5 GRETEEEEGGGGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHLLLPAA 64
G E G G S ++P +P P + A + + G P PGR + P+
Sbjct: 1341 GGEPPLSGGSSGLSLSSPQVPGSPFSYPAPSPSLSS-GGLPRTPGRDFS-FTPTFSEPSG 1398
Query: 65 AFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPLLVLASA 124
LL + P L R GP + + G + L LP L
Sbjct: 1399 PLLLPVCP---------LPTGRRDERSGPLASPVLLETGLPLPLPLPL-PLPLALPAVLR 1448
Query: 125 VRARLARRLRPLLPPP-AGTPGP-RRPPGRP 153
+AR L PLLP P A P P +R PGRP
Sbjct: 1449 AQARAPTPLPPLLPAPLASCPPPMKRKPGRP 1479
>gi|12056463 coagulation factor VIII-associated protein [Homo
sapiens]
Length = 371
Score = 32.7 bits (73), Expect = 0.14
Identities = 46/136 (33%), Positives = 53/136 (38%), Gaps = 20/136 (14%)
Query: 36 LTCPGWSGPPL--LPGRLLAGLLLHLLL--PAAAFLLVLLPAAAVVYLGFLCHSRVHPAP 91
L CP G PL L A + LHL L PAAA L L AAA+ LG + H
Sbjct: 108 LVCPAAYGEPLQAAASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQR 167
Query: 92 GPRCRALFSDRGSAALIVFGLLSLPPLLVL----ASAVRARLARRLR----------PLL 137
+ + AAL G + LL A AV R+ R R P
Sbjct: 168 AAQLQ--LPQLPLAALQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPP 225
Query: 138 PPPAGTPGPRRPPGRP 153
PPPA PGP P P
Sbjct: 226 PPPAPQPGPGATPALP 241
>gi|14719400 ADP-ribosylation factor binding protein 3 isoform short
[Homo sapiens]
Length = 690
Score = 32.7 bits (73), Expect = 0.14
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 24/139 (17%)
Query: 22 PMLP--RGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHL--LLPAAAFLLVLLPAAAVV 77
P+LP GP L+ PP P LA + + L + P++A LP A
Sbjct: 516 PLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSA-----LPVTAYD 570
Query: 78 YLGF--LCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPLLVLASAVRARLARRLRP 135
GF L H PG R ++V +L+ PL V + ++A + + ++
Sbjct: 571 KNGFRILFHFAKECPPG---------RPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKV 621
Query: 136 LLPPPAGTP----GPRRPP 150
L PP+GT P +PP
Sbjct: 622 KLQPPSGTELSPFSPIQPP 640
>gi|20336267 ADP-ribosylation factor binding protein 3 isoform long
[Homo sapiens]
Length = 723
Score = 32.7 bits (73), Expect = 0.14
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 24/139 (17%)
Query: 22 PMLP--RGPPDHQASALTCPGWSGPPLLPGRLLAGLLLHL--LLPAAAFLLVLLPAAAVV 77
P+LP GP L+ PP P LA + + L + P++A LP A
Sbjct: 549 PLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSA-----LPVTAYD 603
Query: 78 YLGF--LCHSRVHPAPGPRCRALFSDRGSAALIVFGLLSLPPLLVLASAVRARLARRLRP 135
GF L H PG R ++V +L+ PL V + ++A + + ++
Sbjct: 604 KNGFRILFHFAKECPPG---------RPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKV 654
Query: 136 LLPPPAGTP----GPRRPP 150
L PP+GT P +PP
Sbjct: 655 KLQPPSGTELSPFSPIQPP 673
>gi|56090586 coagulation factor VIII-associated (intronic
transcript) 3 [Homo sapiens]
Length = 371
Score = 32.7 bits (73), Expect = 0.14
Identities = 46/136 (33%), Positives = 53/136 (38%), Gaps = 20/136 (14%)
Query: 36 LTCPGWSGPPL--LPGRLLAGLLLHLLL--PAAAFLLVLLPAAAVVYLGFLCHSRVHPAP 91
L CP G PL L A + LHL L PAAA L L AAA+ LG + H
Sbjct: 108 LVCPAAYGEPLQAAASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQR 167
Query: 92 GPRCRALFSDRGSAALIVFGLLSLPPLLVL----ASAVRARLARRLR----------PLL 137
+ + AAL G + LL A AV R+ R R P
Sbjct: 168 AAQLQ--LPQLPLAALQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPP 225
Query: 138 PPPAGTPGPRRPPGRP 153
PPPA PGP P P
Sbjct: 226 PPPAPQPGPGATPALP 241
>gi|56090588 coagulation factor VIII-associated (intronic
transcript) 2 [Homo sapiens]
Length = 371
Score = 32.7 bits (73), Expect = 0.14
Identities = 46/136 (33%), Positives = 53/136 (38%), Gaps = 20/136 (14%)
Query: 36 LTCPGWSGPPL--LPGRLLAGLLLHLLL--PAAAFLLVLLPAAAVVYLGFLCHSRVHPAP 91
L CP G PL L A + LHL L PAAA L L AAA+ LG + H
Sbjct: 108 LVCPAAYGEPLQAAASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQR 167
Query: 92 GPRCRALFSDRGSAALIVFGLLSLPPLLVL----ASAVRARLARRLR----------PLL 137
+ + AAL G + LL A AV R+ R R P
Sbjct: 168 AAQLQ--LPQLPLAALQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPP 225
Query: 138 PPPAGTPGPRRPPGRP 153
PPPA PGP P P
Sbjct: 226 PPPAPQPGPGATPALP 241
>gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 32.3 bits (72), Expect = 0.19
Identities = 53/162 (32%), Positives = 62/162 (38%), Gaps = 32/162 (19%)
Query: 4 QGRETEEEEGGGGASDTAPMLPRGPPDHQASALTC-PGWSGPPLLPGRLLAGLLLHLLLP 62
+ +E EEEE G G+ + P+LP P L C + G LP RL G + L
Sbjct: 36 EDQEEEEEEEGDGSPGSGPILPPASP---VECLICVSSFDGVFKLPKRLDCGHVFCLECL 92
Query: 63 AAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRA---LFSDRGSAAL-IVFGLL----S 114
A L AV P CRA L RG AL GLL
Sbjct: 93 ARLSLATAGGGNAVAC--------------PVCRAPTRLAPRRGLPALPTQSGLLPRDAR 138
Query: 115 LPPLLVLASAVRARLARRLRPLLPPPAGTPGPRR---PPGRP 153
PP +VR R L L PPP PGPR+ PP P
Sbjct: 139 APP--SRQGSVRFDRRRGLLYLRPPPP-PPGPRKARAPPPPP 177
>gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 32.3 bits (72), Expect = 0.19
Identities = 53/162 (32%), Positives = 62/162 (38%), Gaps = 32/162 (19%)
Query: 4 QGRETEEEEGGGGASDTAPMLPRGPPDHQASALTC-PGWSGPPLLPGRLLAGLLLHLLLP 62
+ +E EEEE G G+ + P+LP P L C + G LP RL G + L
Sbjct: 36 EDQEEEEEEEGDGSPGSGPILPPASP---VECLICVSSFDGVFKLPKRLDCGHVFCLECL 92
Query: 63 AAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRA---LFSDRGSAAL-IVFGLL----S 114
A L AV P CRA L RG AL GLL
Sbjct: 93 ARLSLATAGGGNAVAC--------------PVCRAPTRLAPRRGLPALPTQSGLLPRDAR 138
Query: 115 LPPLLVLASAVRARLARRLRPLLPPPAGTPGPRR---PPGRP 153
PP +VR R L L PPP PGPR+ PP P
Sbjct: 139 APP--SRQGSVRFDRRRGLLYLRPPPP-PPGPRKARAPPPPP 177
>gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 32.3 bits (72), Expect = 0.19
Identities = 53/162 (32%), Positives = 62/162 (38%), Gaps = 32/162 (19%)
Query: 4 QGRETEEEEGGGGASDTAPMLPRGPPDHQASALTC-PGWSGPPLLPGRLLAGLLLHLLLP 62
+ +E EEEE G G+ + P+LP P L C + G LP RL G + L
Sbjct: 36 EDQEEEEEEEGDGSPGSGPILPPASP---VECLICVSSFDGVFKLPKRLDCGHVFCLECL 92
Query: 63 AAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPRCRA---LFSDRGSAAL-IVFGLL----S 114
A L AV P CRA L RG AL GLL
Sbjct: 93 ARLSLATAGGGNAVAC--------------PVCRAPTRLAPRRGLPALPTQSGLLPRDAR 138
Query: 115 LPPLLVLASAVRARLARRLRPLLPPPAGTPGPRR---PPGRP 153
PP +VR R L L PPP PGPR+ PP P
Sbjct: 139 APP--SRQGSVRFDRRRGLLYLRPPPP-PPGPRKARAPPPPP 177
>gi|46909594 a disintegrin and metalloproteinase domain 15 isoform 3
preproprotein [Homo sapiens]
Length = 839
Score = 32.3 bits (72), Expect = 0.19
Identities = 38/133 (28%), Positives = 51/133 (38%), Gaps = 25/133 (18%)
Query: 40 GWSGPPLLP-----GRLLAGLLLHLLLPAAAFLLVLLPAAAVVYLGFLCHSRVHPAPGPR 94
GW+ P L GLLL LL+ LLVL+ A + H R+ GP
Sbjct: 678 GWAPPDCTTQLKATSSLTTGLLLSLLV-----LLVLVMLGASYWYRARLHQRLCQLKGPT 732
Query: 95 CRALFSDRGSA--------ALIVFGLLSLPPLLVLASAVRAR----LARRLR---PLLPP 139
C+ + G + AL+ G L A R +++RL+ P PP
Sbjct: 733 CQYRAAQSGPSERPGPPQRALLARGTKQASALSFPAPPSRPLPPDPVSKRLQSQGPAKPP 792
Query: 140 PAGTPGPRRPPGR 152
P P P P GR
Sbjct: 793 PPRKPLPADPQGR 805
>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
sapiens]
Length = 258
Score = 32.0 bits (71), Expect = 0.24
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 88 HPAPGPRCRALFSDRGSAALIVFGLLSLPPLLVLASAVRARLARRLRPLLPPPAGTPGPR 147
+PA GP A +D G A G PP L + + R +P P P G PGP
Sbjct: 35 YPARGPGAGAR-TDGGDALSEQSGA---PPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPP 90
Query: 148 RPPGRPDE 155
P G P E
Sbjct: 91 GPVGPPGE 98
Score = 28.1 bits (61), Expect = 3.5
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 15 GGASDTAPMLPRGPPDHQASALTCPGWSGPPLLPGRLLAGLL---LHLLLPAAAF 66
G D P P GPP + PG GPP LPG +G + + +P AF
Sbjct: 82 GPPGDPGPPGPVGPPGEKGE----PGKPGPPGLPGAGGSGAISTATYTTVPRVAF 132
>gi|222352129 von Willebrand factor A domain containing 5B2 [Homo
sapiens]
Length = 1242
Score = 31.6 bits (70), Expect = 0.32
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 133 LRPLLPPPAGTPGPRRPPGRPDEDEQLC 160
L PL PP G PGP RPPG D+ C
Sbjct: 156 LTPLAPP--GPPGPPRPPGLCDDSPTSC 181
Score = 26.9 bits (58), Expect = 7.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 134 RPLLPPPAGTPGPRRPPGRP 153
R L P T GPRRPP RP
Sbjct: 1008 RALGDPATPTEGPRRPPPRP 1027
>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 31.6 bits (70), Expect = 0.32
Identities = 27/76 (35%), Positives = 33/76 (43%), Gaps = 17/76 (22%)
Query: 89 PAPGPRCRA---LFSDRGSAALIVFGLLSLPPLLVLASAV--------RARLARRLRPLL 137
P PG C A L +DR SL P LASA +A+L R + +
Sbjct: 65 PDPGEGCEAWRRLSADRWPRPA------SLSPRAALASAPGQKPQPARQAQLPRPVSGVR 118
Query: 138 PPPAGTPGPRRPPGRP 153
PPP G G + PGRP
Sbjct: 119 PPPRGRVGLSQAPGRP 134
>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 31.6 bits (70), Expect = 0.32
Identities = 27/76 (35%), Positives = 33/76 (43%), Gaps = 17/76 (22%)
Query: 89 PAPGPRCRA---LFSDRGSAALIVFGLLSLPPLLVLASAV--------RARLARRLRPLL 137
P PG C A L +DR SL P LASA +A+L R + +
Sbjct: 65 PDPGEGCEAWRRLSADRWPRPA------SLSPRAALASAPGQKPQPARQAQLPRPVSGVR 118
Query: 138 PPPAGTPGPRRPPGRP 153
PPP G G + PGRP
Sbjct: 119 PPPRGRVGLSQAPGRP 134
>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 31.6 bits (70), Expect = 0.32
Identities = 27/76 (35%), Positives = 33/76 (43%), Gaps = 17/76 (22%)
Query: 89 PAPGPRCRA---LFSDRGSAALIVFGLLSLPPLLVLASAV--------RARLARRLRPLL 137
P PG C A L +DR SL P LASA +A+L R + +
Sbjct: 65 PDPGEGCEAWRRLSADRWPRPA------SLSPRAALASAPGQKPQPARQAQLPRPVSGVR 118
Query: 138 PPPAGTPGPRRPPGRP 153
PPP G G + PGRP
Sbjct: 119 PPPRGRVGLSQAPGRP 134
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 31.6 bits (70), Expect = 0.32
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 135 PLLPPPAGTPGPRRPPGRP 153
P L P G PGP+ PPGRP
Sbjct: 1245 PALEGPKGNPGPQGPPGRP 1263
Score = 28.1 bits (61), Expect = 3.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Query: 137 LPPPAGTPGPRRPPGRP 153
LP P G PGP PPG P
Sbjct: 184 LPGPTGIPGPIGPPGPP 200
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.142 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,380,698
Number of Sequences: 37866
Number of extensions: 539584
Number of successful extensions: 6843
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 122
Number of HSP's that attempted gapping in prelim test: 5315
Number of HSP's gapped (non-prelim): 1682
length of query: 163
length of database: 18,247,518
effective HSP length: 94
effective length of query: 69
effective length of database: 14,688,114
effective search space: 1013479866
effective search space used: 1013479866
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.