LOC100133893 15281

Name: LOC100133893	Sequence: fasta or formatted (340aa)		NCBI GI: 226246648
Description: MANSC domain-containing protein		Not currently referenced in the text
Other entries for this name: alt prot {380aa} PREDICTED: MANSC domain-containing protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.2 11 1 C cysteine 4.1 14 2 D aspartate 4.4 15 1 E glutamate 4.1 14 2 F phenylalanine 3.2 11 2 G glycine 4.4 15 1 H histidine 2.6 9 1 I isoleucine 6.2 21 1 K lysine 5.9 20 1 L leucine 10.0 34 3 M methionine 1.8 6 1 N asparagine 7.1 24 1 P proline 5.0 17 2 Q glutamine 3.5 12 2 R arginine 3.8 13 2 S serine 12.6 43 3 T threonine 8.5 29 3 V valine 5.3 18 2 W tryptophan 1.5 5 1 Y tyrosine 2.6 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 MANSC domain-containing protein LOC100133893 0.874 PREDICTED: MANSC domain-containing protein LOC100287284 0.874 PREDICTED: similar to hCG1642672 LOC100287284 0.874 PREDICTED: hypothetical protein XP_002343190 MANSC1 0.031 MANSC domain containing 1 MUC3A 0.018 PREDICTED: mucin 3A, cell surface associated, parti... MUC3A 0.018 PREDICTED: mucin 3A, intestinal IMPG2 0.018 interphotoreceptor matrix proteoglycan 2 ARHGAP5 0.015 Rho GTPase activating protein 5 isoform a ARHGAP5 0.015 Rho GTPase activating protein 5 isoform b MUC3B 0.015 PREDICTED: mucin 3B, cell surface associated, parti... LOC100131251 0.012 PREDICTED: hypothetical protein LOC100131251 0.012 PREDICTED: hypothetical protein SPINT1 0.012 serine peptidase inhibitor, Kunitz type 1 isoform 2 ... SPINT1 0.012 serine peptidase inhibitor, Kunitz type 1 isoform 2 p... SPINT1 0.012 serine peptidase inhibitor, Kunitz type 1 isoform 1 ... SYT2 0.010 synaptotagmin II SYT2 0.010 synaptotagmin II NAT10 0.009 N-acetyltransferase 10 isoform b NAT10 0.009 N-acetyltransferase 10 isoform a USP26 0.007 ubiquitin-specific protease 26 MUC21 0.007 mucin 21 RNASE9 0.007 ribonuclease, RNase A family, 9 (non-active) isofor... RNASE9 0.007 ribonuclease, RNase A family, 9 (non-active) isofor... RNASE9 0.007 ribonuclease, RNase A family, 9 (non-active) isofor... RNASE9 0.007 ribonuclease, RNase A family, 9 (non-active) isofor... RNASE9 0.007 ribonuclease, RNase A family, 9 (non-active) isofor... RNASE9 0.007 ribonuclease, RNase A family, 9 (non-active) isofor... RNASE9 0.007 ribonuclease, RNase A family, 9 (non-active) isofor... CHMP1B 0.006 chromatin modifying protein 1B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.