Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RNASE9 Sequence: fasta or formatted (205aa) NCBI GI: 160333401
Description:

ribonuclease, RNase A family, 9 (non-active) isoform 2

Referenced in:

RNases and RNA Stability

Other entries for this name:
alt mRNA [205aa] ribonuclease, RNase A family, 9 (non-active) isoform 2
alt mRNA [205aa] ribonuclease, RNase A family, 9 (non-active) isoform 2
alt prot [210aa] ribonuclease, RNase A family, 9 (non-active) isoform 1
alt prot [210aa] ribonuclease, RNase A family, 9 (non-active) isoform 1
alt prot [210aa] ribonuclease, RNase A family, 9 (non-active) isoform 1
alt prot [210aa] ribonuclease, RNase A family, 9 (non-active) isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.0          4           1
 C cysteine            3.9          8           1
 D aspartate           3.4          7           1
 E glutamate          10.7         22           2
 F phenylalanine       5.4         11           2
 G glycine             3.9          8           1
 H histidine           3.4          7           1
 I isoleucine          5.4         11           1
 K lysine              7.3         15           2
 L leucine            10.2         21           4
 M methionine          2.9          6           2
 N asparagine          4.4          9           1
 P proline             7.3         15           2
 Q glutamine           4.4          9           2
 R arginine            5.4         11           2
 S serine              3.4          7           1
 T threonine           4.4          9           2
 V valine              6.3         13           1
 W tryptophan          1.0          2           1
 Y tyrosine            4.9         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribonuclease, RNase A family, 9 (non-active) isofor... 
RNASE9                1.000   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                1.000   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                1.000   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                1.000   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                1.000   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE9                1.000   ribonuclease, RNase A family, 9 (non-active) isofor...
RNASE1                0.059   pancreatic ribonuclease precursor 
RNASE1                0.059   pancreatic ribonuclease precursor 
RNASE1                0.059   pancreatic ribonuclease precursor 
RNASE1                0.059   pancreatic ribonuclease precursor 
RNASE12               0.049   ribonuclease, RNase A family, 12 (non-active) 
RNASE10               0.039   ribonuclease, RNase A family, 10 (non-active) 
RNASE7                0.037   ribonuclease, RNase A family, 7 
RNASE6                0.034   ribonuclease, RNase A family, k6 
RNASE2                0.027   ribonuclease, RNase A family, 2 (liver, eosinophil-de...
RNASE4                0.024   ribonuclease, RNase A family, 4 precursor 
RNASE4                0.024   ribonuclease, RNase A family, 4 precursor 
BRDT                  0.017   testis-specific bromodomain protein 
BRDT                  0.017   testis-specific bromodomain protein 
ITGB2                 0.015   integrin, beta 2 precursor 
ITGB2                 0.015   integrin, beta 2 precursor 
MASP1                 0.015   mannan-binding lectin serine protease 1 isoform 1 pr...
RNASE8                0.012   ribonuclease, RNase A family, 8 
LOC100133893          0.012   MANSC domain-containing protein 
CCDC132               0.010   coiled-coil domain containing 132 isoform a 
MAEL                  0.007   maelstrom homolog 
CENPF                 0.007   centromere protein F 
BPTF                  0.007   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.007   bromodomain PHD finger transcription factor isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press