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Search of human proteins with 224591404
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|224591404 cancer/testis antigen family 147, member B1 [Homo
sapiens]
(299 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224591404 cancer/testis antigen family 147, member B1 [Homo s... 591 e-169
gi|121949802 cancer/testis antigen family 47, member A1 [Homo sa... 478 e-135
gi|121949798 cancer/testis antigen family 47, member A2 [Homo sa... 478 e-135
gi|121949773 cancer/testis antigen family 47, member A3 [Homo sa... 478 e-135
gi|121949771 cancer/testis antigen family 47, member A4 [Homo sa... 478 e-135
gi|121949796 cancer/testis antigen family 47, member A5 [Homo sa... 478 e-135
gi|121949794 cancer/testis antigen family 47, member A6 [Homo sa... 478 e-135
gi|121949792 cancer/testis antigen family 47, member A7 [Homo sa... 478 e-135
gi|121949790 cancer/testis antigen family 47, member A8 [Homo sa... 478 e-135
gi|121949788 cancer/testis antigen family 47, member A9 [Homo sa... 478 e-135
gi|121949786 cancer/testis antigen family 47, member A10 [Homo s... 478 e-135
gi|122114660 cancer/testis antigen family 47, member A11 [Homo s... 478 e-135
gi|239746922 PREDICTED: similar to cancer/testis antigen family ... 365 e-101
gi|113430055 PREDICTED: similar to cancer/testis antigen family ... 352 2e-97
gi|239752405 PREDICTED: similar to cancer/testis antigen family ... 347 7e-96
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 66 4e-11
gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens] 51 1e-06
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 50 2e-06
gi|17975763 myelin transcription factor 1 [Homo sapiens] 49 5e-06
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 47 2e-05
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 47 2e-05
gi|68348716 AF4/FMR2 family, member 3 isoform 2 [Homo sapiens] 47 3e-05
gi|68348714 AF4/FMR2 family, member 3 isoform 1 [Homo sapiens] 47 3e-05
gi|157738619 smoothelin-like 1 [Homo sapiens] 46 3e-05
gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo sap... 46 5e-05
gi|116235474 LKB1 interacting protein [Homo sapiens] 45 6e-05
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 45 8e-05
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap... 45 1e-04
gi|93204861 protein phosphatase 1, regulatory (inhibitor) subuni... 45 1e-04
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 44 1e-04
>gi|224591404 cancer/testis antigen family 147, member B1 [Homo
sapiens]
Length = 299
Score = 591 bits (1523), Expect = e-169
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
Query: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI
Sbjct: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
Query: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA
Sbjct: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
Query: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEA 240
APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEA
Sbjct: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEA 240
Query: 241 TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT
Sbjct: 241 TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
>gi|121949802 cancer/testis antigen family 47, member A1 [Homo
sapiens]
Length = 288
Score = 478 bits (1231), Expect = e-135
Identities = 254/299 (84%), Positives = 261/299 (87%), Gaps = 11/299 (3%)
Query: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSD+VPAAEVVGVAGPVEG
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
LGEEEGEQAAGLAAVP+GGSAEEDSDIGPAT EEEEEEEGNEAANFDLAV RRYPA+GI
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPAT-EEEEEEEGNEAANFDLAVVARRYPASGI 119
Query: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
FV L +VHSLL RL HNDHI I NR LSRLMVGPHAA NLW N P LLL QRLGAGAA
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAA 179
Query: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEA 240
A GEGLGLI QEAASVPEPAVPADLAEMAREPAEEAA+EK EEA E E
Sbjct: 180 ARAGEGLGLI------QEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATE----EPD 229
Query: 241 TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
EEPA EEPT++EA APEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKD ENKVKNSKGT
Sbjct: 230 AEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT 288
>gi|121949798 cancer/testis antigen family 47, member A2 [Homo
sapiens]
Length = 288
Score = 478 bits (1231), Expect = e-135
Identities = 254/299 (84%), Positives = 261/299 (87%), Gaps = 11/299 (3%)
Query: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSD+VPAAEVVGVAGPVEG
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
LGEEEGEQAAGLAAVP+GGSAEEDSDIGPAT EEEEEEEGNEAANFDLAV RRYPA+GI
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPAT-EEEEEEEGNEAANFDLAVVARRYPASGI 119
Query: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
FV L +VHSLL RL HNDHI I NR LSRLMVGPHAA NLW N P LLL QRLGAGAA
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAA 179
Query: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEA 240
A GEGLGLI QEAASVPEPAVPADLAEMAREPAEEAA+EK EEA E E
Sbjct: 180 ARAGEGLGLI------QEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATE----EPD 229
Query: 241 TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
EEPA EEPT++EA APEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKD ENKVKNSKGT
Sbjct: 230 AEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT 288
>gi|121949773 cancer/testis antigen family 47, member A3 [Homo
sapiens]
Length = 288
Score = 478 bits (1231), Expect = e-135
Identities = 254/299 (84%), Positives = 261/299 (87%), Gaps = 11/299 (3%)
Query: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSD+VPAAEVVGVAGPVEG
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
LGEEEGEQAAGLAAVP+GGSAEEDSDIGPAT EEEEEEEGNEAANFDLAV RRYPA+GI
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPAT-EEEEEEEGNEAANFDLAVVARRYPASGI 119
Query: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
FV L +VHSLL RL HNDHI I NR LSRLMVGPHAA NLW N P LLL QRLGAGAA
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAA 179
Query: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEA 240
A GEGLGLI QEAASVPEPAVPADLAEMAREPAEEAA+EK EEA E E
Sbjct: 180 ARAGEGLGLI------QEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATE----EPD 229
Query: 241 TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
EEPA EEPT++EA APEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKD ENKVKNSKGT
Sbjct: 230 AEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT 288
>gi|121949771 cancer/testis antigen family 47, member A4 [Homo
sapiens]
Length = 288
Score = 478 bits (1231), Expect = e-135
Identities = 254/299 (84%), Positives = 261/299 (87%), Gaps = 11/299 (3%)
Query: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSD+VPAAEVVGVAGPVEG
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
LGEEEGEQAAGLAAVP+GGSAEEDSDIGPAT EEEEEEEGNEAANFDLAV RRYPA+GI
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPAT-EEEEEEEGNEAANFDLAVVARRYPASGI 119
Query: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
FV L +VHSLL RL HNDHI I NR LSRLMVGPHAA NLW N P LLL QRLGAGAA
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAA 179
Query: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEA 240
A GEGLGLI QEAASVPEPAVPADLAEMAREPAEEAA+EK EEA E E
Sbjct: 180 ARAGEGLGLI------QEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATE----EPD 229
Query: 241 TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
EEPA EEPT++EA APEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKD ENKVKNSKGT
Sbjct: 230 AEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT 288
>gi|121949796 cancer/testis antigen family 47, member A5 [Homo
sapiens]
Length = 288
Score = 478 bits (1231), Expect = e-135
Identities = 254/299 (84%), Positives = 261/299 (87%), Gaps = 11/299 (3%)
Query: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSD+VPAAEVVGVAGPVEG
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
LGEEEGEQAAGLAAVP+GGSAEEDSDIGPAT EEEEEEEGNEAANFDLAV RRYPA+GI
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPAT-EEEEEEEGNEAANFDLAVVARRYPASGI 119
Query: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
FV L +VHSLL RL HNDHI I NR LSRLMVGPHAA NLW N P LLL QRLGAGAA
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAA 179
Query: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEA 240
A GEGLGLI QEAASVPEPAVPADLAEMAREPAEEAA+EK EEA E E
Sbjct: 180 ARAGEGLGLI------QEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATE----EPD 229
Query: 241 TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
EEPA EEPT++EA APEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKD ENKVKNSKGT
Sbjct: 230 AEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT 288
>gi|121949794 cancer/testis antigen family 47, member A6 [Homo
sapiens]
Length = 288
Score = 478 bits (1231), Expect = e-135
Identities = 254/299 (84%), Positives = 261/299 (87%), Gaps = 11/299 (3%)
Query: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSD+VPAAEVVGVAGPVEG
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
LGEEEGEQAAGLAAVP+GGSAEEDSDIGPAT EEEEEEEGNEAANFDLAV RRYPA+GI
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPAT-EEEEEEEGNEAANFDLAVVARRYPASGI 119
Query: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
FV L +VHSLL RL HNDHI I NR LSRLMVGPHAA NLW N P LLL QRLGAGAA
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAA 179
Query: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEA 240
A GEGLGLI QEAASVPEPAVPADLAEMAREPAEEAA+EK EEA E E
Sbjct: 180 ARAGEGLGLI------QEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATE----EPD 229
Query: 241 TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
EEPA EEPT++EA APEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKD ENKVKNSKGT
Sbjct: 230 AEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT 288
>gi|121949792 cancer/testis antigen family 47, member A7 [Homo
sapiens]
Length = 288
Score = 478 bits (1231), Expect = e-135
Identities = 254/299 (84%), Positives = 261/299 (87%), Gaps = 11/299 (3%)
Query: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSD+VPAAEVVGVAGPVEG
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
LGEEEGEQAAGLAAVP+GGSAEEDSDIGPAT EEEEEEEGNEAANFDLAV RRYPA+GI
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPAT-EEEEEEEGNEAANFDLAVVARRYPASGI 119
Query: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
FV L +VHSLL RL HNDHI I NR LSRLMVGPHAA NLW N P LLL QRLGAGAA
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAA 179
Query: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEA 240
A GEGLGLI QEAASVPEPAVPADLAEMAREPAEEAA+EK EEA E E
Sbjct: 180 ARAGEGLGLI------QEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATE----EPD 229
Query: 241 TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
EEPA EEPT++EA APEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKD ENKVKNSKGT
Sbjct: 230 AEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT 288
>gi|121949790 cancer/testis antigen family 47, member A8 [Homo
sapiens]
Length = 288
Score = 478 bits (1231), Expect = e-135
Identities = 254/299 (84%), Positives = 261/299 (87%), Gaps = 11/299 (3%)
Query: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSD+VPAAEVVGVAGPVEG
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
LGEEEGEQAAGLAAVP+GGSAEEDSDIGPAT EEEEEEEGNEAANFDLAV RRYPA+GI
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPAT-EEEEEEEGNEAANFDLAVVARRYPASGI 119
Query: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
FV L +VHSLL RL HNDHI I NR LSRLMVGPHAA NLW N P LLL QRLGAGAA
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAA 179
Query: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEA 240
A GEGLGLI QEAASVPEPAVPADLAEMAREPAEEAA+EK EEA E E
Sbjct: 180 ARAGEGLGLI------QEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATE----EPD 229
Query: 241 TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
EEPA EEPT++EA APEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKD ENKVKNSKGT
Sbjct: 230 AEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT 288
>gi|121949788 cancer/testis antigen family 47, member A9 [Homo
sapiens]
Length = 288
Score = 478 bits (1231), Expect = e-135
Identities = 254/299 (84%), Positives = 261/299 (87%), Gaps = 11/299 (3%)
Query: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSD+VPAAEVVGVAGPVEG
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
LGEEEGEQAAGLAAVP+GGSAEEDSDIGPAT EEEEEEEGNEAANFDLAV RRYPA+GI
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPAT-EEEEEEEGNEAANFDLAVVARRYPASGI 119
Query: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
FV L +VHSLL RL HNDHI I NR LSRLMVGPHAA NLW N P LLL QRLGAGAA
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAA 179
Query: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEA 240
A GEGLGLI QEAASVPEPAVPADLAEMAREPAEEAA+EK EEA E E
Sbjct: 180 ARAGEGLGLI------QEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATE----EPD 229
Query: 241 TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
EEPA EEPT++EA APEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKD ENKVKNSKGT
Sbjct: 230 AEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT 288
>gi|121949786 cancer/testis antigen family 47, member A10 [Homo
sapiens]
Length = 288
Score = 478 bits (1231), Expect = e-135
Identities = 254/299 (84%), Positives = 261/299 (87%), Gaps = 11/299 (3%)
Query: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSD+VPAAEVVGVAGPVEG
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
LGEEEGEQAAGLAAVP+GGSAEEDSDIGPAT EEEEEEEGNEAANFDLAV RRYPA+GI
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPAT-EEEEEEEGNEAANFDLAVVARRYPASGI 119
Query: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
FV L +VHSLL RL HNDHI I NR LSRLMVGPHAA NLW N P LLL QRLGAGAA
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAA 179
Query: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEA 240
A GEGLGLI QEAASVPEPAVPADLAEMAREPAEEAA+EK EEA E E
Sbjct: 180 ARAGEGLGLI------QEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATE----EPD 229
Query: 241 TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
EEPA EEPT++EA APEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKD ENKVKNSKGT
Sbjct: 230 AEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT 288
>gi|122114660 cancer/testis antigen family 47, member A11 [Homo
sapiens]
Length = 288
Score = 478 bits (1231), Expect = e-135
Identities = 254/299 (84%), Positives = 261/299 (87%), Gaps = 11/299 (3%)
Query: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSD+VPAAEVVGVAGPVEG
Sbjct: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEG 60
Query: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
LGEEEGEQAAGLAAVP+GGSAEEDSDIGPAT EEEEEEEGNEAANFDLAV RRYPA+GI
Sbjct: 61 LGEEEGEQAAGLAAVPRGGSAEEDSDIGPAT-EEEEEEEGNEAANFDLAVVARRYPASGI 119
Query: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
FV L +VHSLL RL HNDHI I NR LSRLMVGPHAA NLW N P LLL QRLGAGAA
Sbjct: 120 HFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAA 179
Query: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEA 240
A GEGLGLI QEAASVPEPAVPADLAEMAREPAEEAA+EK EEA E E
Sbjct: 180 ARAGEGLGLI------QEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATE----EPD 229
Query: 241 TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
EEPA EEPT++EA APEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKD ENKVKNSKGT
Sbjct: 230 AEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT 288
>gi|239746922 PREDICTED: similar to cancer/testis antigen family
147, member B1 isoform 2 [Homo sapiens]
Length = 294
Score = 365 bits (937), Expect = e-101
Identities = 208/309 (67%), Positives = 227/309 (73%), Gaps = 25/309 (8%)
Query: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
MSATGD+ Q DQEAPV+QEGAQAEA G ++EGGDSGPDS + V GVAGP+ G
Sbjct: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVG--DREGGDSGPDSGNTV-----AGVAGPMRG 53
Query: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
LGEEEGEQAAGLAA P GG+AEEDS+I EEEEEEEE NEA NFDL A RRYP G
Sbjct: 54 LGEEEGEQAAGLAAAPGGGNAEEDSEIRIVEEEEEEEEERNEADNFDLVAAARRYPIRGF 113
Query: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
FL +VHSLL R+YHNDHI I R RLM A P+ + P LLL+ +RLG GAA
Sbjct: 114 RMEFLDMVHSLLLRIYHNDHILIRMRG-GRLMRRRRTAAPSGSEEPRLLLVHERLGVGAA 172
Query: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEA 240
PEGEGLGL+ QEAA VPEP VPADLAEMAREPAEE A+EKP EEAAEE+L EEA
Sbjct: 173 GPEGEGLGLL------QEAALVPEPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEA 226
Query: 241 TEEPA----------AEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVE 290
EEPA AEEP +EEA APEEVTK Q EKWDEEAQDAAG+EEKE EKEKD E
Sbjct: 227 AEEPAKEEPAAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKE-EKEKDAE 285
Query: 291 NKVKNSKGT 299
NKVKNSKGT
Sbjct: 286 NKVKNSKGT 294
>gi|113430055 PREDICTED: similar to cancer/testis antigen family
147, member B1 isoform 1 [Homo sapiens]
Length = 284
Score = 352 bits (904), Expect = 2e-97
Identities = 203/300 (67%), Positives = 223/300 (74%), Gaps = 17/300 (5%)
Query: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
MSATGD+ Q DQEAPV+QEGAQAEA G ++EGGDSGPDS + V GVAGP+ G
Sbjct: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAVG--DREGGDSGPDSGNTV-----AGVAGPMRG 53
Query: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
LGEEEGEQAAGLAA P GG+AEEDS+I EEEEEEEE NEA NFDL A RRYP G
Sbjct: 54 LGEEEGEQAAGLAAAPGGGNAEEDSEIR-IVEEEEEEEERNEADNFDLVAAARRYPIRGF 112
Query: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
FL +VHSLL R+YHNDHI I R RLM A P+ + P LLL+ +RLG GAA
Sbjct: 113 RMEFLDMVHSLLLRIYHNDHILIRMRG-GRLMRRRRTAAPSGSEEPRLLLVHERLGVGAA 171
Query: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEE- 239
PEGEGLGL+QEAA V PEP VPADLAEMAREPAEE A+E+ EEAAEE EE
Sbjct: 172 GPEGEGLGLLQEAALV------PEPEVPADLAEMAREPAEEPAEEELAEEAAEEPAKEEP 225
Query: 240 ATEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
A EE +AEEP +EEA APEEVTK Q EKWDEEAQDAAG+EEKE EKEKD ENKVKNSKGT
Sbjct: 226 AAEEESAEEPATEEAAAPEEVTKYQHEKWDEEAQDAAGKEEKE-EKEKDAENKVKNSKGT 284
>gi|239752405 PREDICTED: similar to cancer/testis antigen family
147, member B1 [Homo sapiens]
Length = 290
Score = 347 bits (890), Expect = 7e-96
Identities = 205/307 (66%), Positives = 226/307 (73%), Gaps = 25/307 (8%)
Query: 1 MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEG 60
MSATGD+ Q DQEAPV+QEGAQAEA G ++EGGDSGPDS + V GVAGP+ G
Sbjct: 1 MSATGDQDLIQEDQEAPVNQEGAQAEAGG--DREGGDSGPDSGNTV-----AGVAGPMRG 53
Query: 61 LGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGI 120
LGEEEGEQAAGLAA P GG+AEEDS+I EEEEEEEE NEA NFDL A RRYP G
Sbjct: 54 LGEEEGEQAAGLAAAPGGGNAEEDSEI-RIVEEEEEEEERNEADNFDLVAAARRYPIRGF 112
Query: 121 GFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAA 180
FL +VHSLL R+YHNDHI I R RLM G AA P+ + P LLL+ +RLG GAA
Sbjct: 113 RMEFLDMVHSLLLRIYHNDHILIRMRG-GRLMRGXTAA-PSGSEEPRLLLVHERLGVGAA 170
Query: 181 APEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAE---EAADEKPPEEAAEEKLT 237
PEGEGLGL+ QEAA VPEP VPADLAEMAREPAE E A EKP EEAAEE+L+
Sbjct: 171 GPEGEGLGLL------QEAALVPEPEVPADLAEMAREPAEEPTEEASEKPTEEAAEEELS 224
Query: 238 EEATEEP-----AAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENK 292
EEA EEP AAEE +++E EEVTK Q EKWDEEAQDAAG+EEKE EKEKD ENK
Sbjct: 225 EEAAEEPRKEESAAEEESAQEPATQEEVTKYQHEKWDEEAQDAAGKEEKE-EKEKDAENK 283
Query: 293 VKNSKGT 299
VKNSKGT
Sbjct: 284 VKNSKGT 290
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 65.9 bits (159), Expect = 4e-11
Identities = 77/293 (26%), Positives = 107/293 (36%), Gaps = 20/293 (6%)
Query: 3 ATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPV-EGL 61
A G+ P D E P ++ Q E+ GA E ++ V A E G P EG
Sbjct: 1879 AEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGA 1938
Query: 62 GEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGIG 121
+E E+AA A +G + E I EEE + E + ++ V T+
Sbjct: 1939 EAQEAEEAAQEA---EGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAEGEA-- 1993
Query: 122 FVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAAA 181
+ +Q A G A + + + + G A
Sbjct: 1994 ----QPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQ 2049
Query: 182 PEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPE-------EAAEE 234
PE +G+ + QEA + A E A+EA E PE EA E
Sbjct: 2050 PESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGE 2109
Query: 235 KLTEEATEEPAAE---EPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQE 284
E E P E +P SE APE ++QPE EAQDA GE + E E
Sbjct: 2110 AQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESE 2162
Score = 59.7 bits (143), Expect = 3e-09
Identities = 75/265 (28%), Positives = 107/265 (40%), Gaps = 35/265 (13%)
Query: 40 PDSSDMVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEE 99
P S+ V AE G +G G +EGE G Q + ++D +G A + +E
Sbjct: 1717 PTSTRTVQGAEGGLGPGLSQGPGVDEGEDGEG----SQRLNRDKDPKLGEAEGDAMAQER 1772
Query: 100 GNEAANFDLAVATRRYPAAGIGFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAV 159
+ N + + + A G + + H D++Q G AA
Sbjct: 1773 EGKTHNSETSAGSELGEAEQEGEGISERGETGGQGSGHEDNLQ-----------GEAAAG 1821
Query: 160 PNLWDNPPLLLLSQRLGA-GAAAPEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREP 218
D P Q GA G APE EG EA E PE A AE +P
Sbjct: 1822 G---DQDP----GQSDGAEGIEAPEAEG-----EAQPESEGVEAPEAEGDAQEAEGEAQP 1869
Query: 219 AEEAADEKPPEEAAEEKLTEEATEEPAAE---EPTSEEAVAPEEVTKSQPEKWDEEAQDA 275
E+ D + PE E + E E P AE +P SE A APE ++QPE EA +
Sbjct: 1870 --ESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALET 1927
Query: 276 AGEEEKEQE--KEKDVENKVKNSKG 298
GE+E E E + ++ E + ++G
Sbjct: 1928 EGEDEPESEGAEAQEAEEAAQEAEG 1952
Score = 54.7 bits (130), Expect = 1e-07
Identities = 82/320 (25%), Positives = 121/320 (37%), Gaps = 46/320 (14%)
Query: 2 SATGDRHPTQGDQ-----------EAPVSQEGAQA-EAAGAGNQEGGDSGPDSSDMVPAA 49
+A GD+ P Q D EA EG +A EA G + G++ P+S D V A
Sbjct: 1819 AAGGDQDPGQSDGAEGIEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPESED-VEAP 1877
Query: 50 EVVGVAGPVEGLGEEEGEQAAGLAAVPQGGSAEE-DSDIGPATEEEEE-EEEGNEAANFD 107
E G A P E E E + +G A E + + P TE E E EG + +
Sbjct: 1878 EAEGEAQP-ESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESE 1936
Query: 108 LAVATRRYPAAGIGFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPP 167
A A AA ++ + Q + + L V
Sbjct: 1937 GAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVE------------- 1983
Query: 168 LLLLSQRLGAGAAAPEGEGLGLIQEAASVQEAASVPEP------AVPADLAEMAREPAEE 221
+ + G A PE E + + +QEA +P A P E A+E E
Sbjct: 1984 ---VETQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEV--E 2038
Query: 222 AADEKPPEEAAEEKLTEEATEEPAAEEPTSE-EAVAPEEVTKSQPEKWDEEAQDAAGEEE 280
+K +A E + E P AEE E E E ++ PE D +AQ+A GE +
Sbjct: 2039 GETQKTEGDAQPES---DGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQ 2095
Query: 281 KEQE--KEKDVENKVKNSKG 298
E E + + E + + ++G
Sbjct: 2096 PESEGVEAPEAEGEAQKAEG 2115
Score = 53.5 bits (127), Expect = 2e-07
Identities = 71/295 (24%), Positives = 100/295 (33%), Gaps = 38/295 (12%)
Query: 3 ATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEGLG 62
A G+ P D EAP ++ Q A + G S+ A EV G EG
Sbjct: 1989 AEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDA 2048
Query: 63 EEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGIGF 122
+ E + + AEE++ +E E E E+ + D A
Sbjct: 2049 QPESDGV-------EAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEA----------- 2090
Query: 123 VFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAAAP 182
Q + + A + P +Q G AP
Sbjct: 2091 ---------------EGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAP 2135
Query: 183 EGEGLGLIQ-EAASVQEAASVPEPAVPADLAEMAREPAE-EAADEKPPEEAAEEKLTEEA 240
E EG + E Q+A +P A+ A E A+ E + PE E + E
Sbjct: 2136 EAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPESEG 2195
Query: 241 TEEPAAE---EPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENK 292
E P AE +P E APE ++QPE E +A GE + E E E E K
Sbjct: 2196 IEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPEAEGEAQPESEGETQGEKK 2250
Score = 52.4 bits (124), Expect = 5e-07
Identities = 73/299 (24%), Positives = 106/299 (35%), Gaps = 49/299 (16%)
Query: 6 DRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEGLGEEE 65
+R + E E +AE G G E G++G S + AG + G+ +
Sbjct: 1771 EREGKTHNSETSAGSELGEAEQEGEGISERGETGGQGSGHEDNLQGEAAAGGDQDPGQSD 1830
Query: 66 GEQAAGLAAVPQGGSAEEDSD--IGPATEEEEEEEEGNEAANFDLAVATRRYPAAGIGFV 123
G A G+ A G A+ +S+ P E + +E EG + A A
Sbjct: 1831 G--AEGIEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEA----- 1883
Query: 124 FLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAAAPE 183
+ S + P A W+ P GA APE
Sbjct: 1884 ----------------------QPESEDVETPEAE----WEVQPE-------SEGAEAPE 1910
Query: 184 GEGLGLIQ-EAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATE 242
E + E+ E EP A+ A E A+EA + PE E E
Sbjct: 1911 AEKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEA 1970
Query: 243 EPAAE--EPTSEEAVAPEEVTKSQPEKWDEEAQDAAGE----EEKEQEKEKDVENKVKN 295
+P +E E E E ++QPE D EA +A GE EE+ Q + VE + K+
Sbjct: 1971 QPESEDVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKS 2029
Score = 49.3 bits (116), Expect = 4e-06
Identities = 67/303 (22%), Positives = 101/303 (33%), Gaps = 36/303 (11%)
Query: 1 MSATGDRHPTQGDQEAPVSQEGAQA-------EAAGAGNQEGGDSGPDSSDMVPAAEVVG 53
+ G+ P EA ++E AQ E+ +QE + S+ V A EV
Sbjct: 1925 LETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEV 1984
Query: 54 VAGPVEGLGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATR 113
EG + E E A + AEE++ E + + EG EA +
Sbjct: 1985 ETQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKT 2044
Query: 114 RYPAAGIGFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQ 173
A +D ++ +P +
Sbjct: 2045 EGDAQP-----------------ESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDA 2087
Query: 174 RLGAGAAAPEGEGLGLIQEAASVQEAASVPEP-----------AVPADLAEMAREPAEEA 222
+ G A PE EG+ + Q+A + P + A AE +P E
Sbjct: 2088 QEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEG 2147
Query: 223 ADEKPPE-EAAEEKLTEEATEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEK 281
+ + E EA E EA E +P E APE ++QPE EA +A GE +
Sbjct: 2148 VEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPESEGIEAPEAEGEAQP 2207
Query: 282 EQE 284
E E
Sbjct: 2208 ELE 2210
Score = 31.2 bits (69), Expect = 1.2
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 213 EMAREPAEEAAD---EKPPEEAAEEKLTEEATEEPAAEEPTSEEAVAPEEVTKSQPEKWD 269
E R+ E+ A E+ E +E++ E T+E E EEAV EE TK++ +
Sbjct: 1275 EAERDSEEQRASSNLEQLAENTVQEEVQLEETKEGTEGEGLQEEAVQLEE-TKTEEGLQE 1333
Query: 270 -----EEAQDAAGEEEKEQEKE 286
EE ++ GE ++E+E +
Sbjct: 1334 EGVQLEETKETEGEGQQEEEAQ 1355
>gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens]
Length = 543
Score = 51.2 bits (121), Expect = 1e-06
Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 219 AEEAADEKPPEEAAEEKLTEEATEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGE 278
AEEA DE P E AEE EE EE EEA EE K + E+ EE + GE
Sbjct: 463 AEEAKDEPPSEGEAEE-------EEKDKEEAEEEEAAEEEEAAKEESEEAKEEEEGGEGE 515
Query: 279 EEKEQEKEKDVENKVKNS 296
E +E ++ ++ E KV+ +
Sbjct: 516 EGEETKEAEEEEKKVEGA 533
Score = 45.8 bits (107), Expect = 5e-05
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 192 EAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAEEPTS 251
EAA +EA P A+ E +E AEE EEAAEE EEA +E + E
Sbjct: 459 EAAKAEEAKDEPPSEGEAEEEEKDKEEAEE-------EEAAEE---EEAAKEESEEAKEE 508
Query: 252 EEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKE 286
EE EE +++ + +E+ + AGEE+ ++K+
Sbjct: 509 EEGGEGEEGEETKEAEEEEKKVEGAGEEQAAKKKD 543
Score = 38.9 bits (89), Expect = 0.006
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 229 EEAAEEKLTEEATEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKD 288
E+ E+ E A E A +EP SE EE K + E+ + ++ A +EE E+ KE++
Sbjct: 450 EQIEVEETIEAAKAEEAKDEPPSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAKEEE 509
Score = 35.8 bits (81), Expect = 0.047
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 233 EEKLTEEATEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENK 292
EE++ E T E A E +E P E + EK EEA++ EE+E KE+ E K
Sbjct: 449 EEQIEVEETIEAAKAEEAKDEP--PSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAK 506
Query: 293 VKNSKG 298
+ G
Sbjct: 507 EEEEGG 512
Score = 34.7 bits (78), Expect = 0.10
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 182 PEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEAT 241
P EG EA ++ E A+ E A+E +EEA +E+ E E + T+EA
Sbjct: 470 PPSEG-----EAEEEEKDKEEAEEEEAAEEEEAAKEESEEAKEEEEGGEGEEGEETKEAE 524
Query: 242 EEPAAEEPTSEEAVAPEE 259
EE E EE A ++
Sbjct: 525 EEEKKVEGAGEEQAAKKK 542
Score = 31.2 bits (69), Expect = 1.2
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
Query: 8 HPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEGLGEEEGE 67
H + E + E A+AE A G++ + D A E A E +EE E
Sbjct: 446 HVQEEQIEVEETIEAAKAEEAKDEPPSEGEAEEEEKDKEEAEEEE--AAEEEEAAKEESE 503
Query: 68 QAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLA 109
+A +GG EE G T+E EEEE+ E A + A
Sbjct: 504 EAK---EEEEGGEGEE----GEETKEAEEEEKKVEGAGEEQA 538
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 50.1 bits (118), Expect = 2e-06
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 191 QEAASVQEAASVP---EPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAE 247
+EAAS ++ A P E PA+ +E A+ A+ K PE+A + EEA P A+
Sbjct: 507 EEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKA-KSPAKEEAKSPPEAK 565
Query: 248 EPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEK 287
P EEA +P EV + K + + + E K EK K
Sbjct: 566 SPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAK 605
Score = 48.9 bits (115), Expect = 5e-06
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 197 QEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAEEPTSEEAVA 256
+EA S E P A+E A+ A+ K PE+A + + EEA A+ P EEA +
Sbjct: 570 EEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKA-KSPVKEEAKSPAEAKSPVKEEAKS 628
Query: 257 PEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSK 297
P EV PEK ++ A EK + EK+ + +K
Sbjct: 629 PAEV--KSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAK 667
Score = 43.5 bits (101), Expect = 2e-04
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 191 QEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAEEPT 250
+E A E A P A A E A+ P + A+ K PE+A + + EEA A+ P
Sbjct: 657 KEEAKSPEKAKSPVKA-EAKSPEKAKSPVK--AEAKSPEKA-KSPVKEEAKSPEKAKSPV 712
Query: 251 SEEAVAPEEVTKSQPE--KWDEEAQDAAGEEEKEQEKEKDVE 290
EEA +PE+ E K E+A+ EE K EK K E
Sbjct: 713 KEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPE 754
Score = 43.1 bits (100), Expect = 3e-04
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 213 EMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEA 272
E PAEEAA PE+ A+ + EEA A+ P EEA +P EV + K +
Sbjct: 500 ETKSPPAEEAAS---PEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKE 556
Query: 273 QDAAGEEEKEQEKEK 287
+ + E K EKE+
Sbjct: 557 EAKSPPEAKSPEKEE 571
Score = 42.7 bits (99), Expect = 4e-04
Identities = 48/155 (30%), Positives = 64/155 (41%), Gaps = 38/155 (24%)
Query: 179 AAAPEGEGLGLIQEAASVQEAASVPEPAV---PADLA--EMAREPAEEAADEKPPEEAAE 233
AA+PE E ++E A A PE PA++ E A+ PA+E A + PPE +
Sbjct: 509 AASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEA-KSPPEAKSP 567
Query: 234 EK---------LTEEATEEPAAEE---------------PTSEEAVAP-------EEVTK 262
EK + E + PA EE P EEA +P +E K
Sbjct: 568 EKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAK 627
Query: 263 SQPE-KWDEEAQDAAGEEEKEQEKEKDVENKVKNS 296
S E K E+A+ EE K EK K E + S
Sbjct: 628 SPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKS 662
Score = 42.0 bits (97), Expect = 7e-04
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 179 AAAPEGEGLGLIQEAASVQEAASV--PEPAVPADLAEMAREPAEEAADEKPPEEAAEEKL 236
A +PE + +EA S ++A S E P +E A+ K PE+A +
Sbjct: 702 AKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDV 761
Query: 237 TEEATEEPAAEEPTS------EEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVE 290
+ PA EE S E+A +P + PEK ++ A EKE K+++V+
Sbjct: 762 KSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVK 821
Query: 291 NKVKNSK 297
+ VK +
Sbjct: 822 SPVKEEE 828
Score = 41.6 bits (96), Expect = 9e-04
Identities = 40/117 (34%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 177 AGAAAPEGEGLGLIQEAASVQEAAS--VPEPAVPADL--AEMAREPAEEAADEKPPEEAA 232
A A +PE + +EA S EA S E PA++ E A+ P +E A K PE+A
Sbjct: 596 AEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEA--KSPEKAK 653
Query: 233 EEKLTEEATEEPAAEEPTSEEAVAPEEVTK--SQPEKWDEEAQDAAGEEEKEQEKEK 287
+ EEA A+ P EA +PE+ K E+A+ EE K EK K
Sbjct: 654 SPE-KEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAK 709
Score = 40.8 bits (94), Expect = 0.001
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 179 AAAPEGEGLGLIQEAAS-VQEAASVPEPA-----VPADLAEMAREPAEEAADEKPPEEAA 232
A +PE E ++A S V+ A PE A A E A+ P +E A K PE+A
Sbjct: 652 AKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEA--KSPEKA- 708
Query: 233 EEKLTEEATEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENK 292
+ + EEA A+ P EEA PE+ P K EEA+ + E+ K EK K ++ K
Sbjct: 709 KSPVKEEAKSPEKAKSPVKEEAKTPEKA--KSPVK--EEAK--SPEKAKSPEKAKTLDVK 762
Query: 293 VKNSK 297
+K
Sbjct: 763 SPEAK 767
Score = 40.8 bits (94), Expect = 0.001
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 179 AAAPEGEGLGLIQEAAS-VQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLT 237
A +P E + ++A S ++E A PE +P E + P +E E+ P+E ++
Sbjct: 785 AKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKK--EEVKSPVKE---EEKPQEVKVKEPP 839
Query: 238 EEATEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSK 297
++A EE A P +EE ++ K + K +EA EE+KE EK E+KV+ K
Sbjct: 840 KKAEEEKAPATPKTEEK---KDSKKEEAPK--KEAPKPKVEEKKEPAVEKPKESKVEAKK 894
Score = 40.4 bits (93), Expect = 0.002
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 213 EMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAEE---PTSEEAVAPEEVTKSQPEKWD 269
++ E EE E EE EE+ EE E EE P +EEA +PE+ KS ++
Sbjct: 465 QVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEA 524
Query: 270 EEAQDAAGEEEKEQEKEKDVENKVK 294
+ +A E++E + +V++ K
Sbjct: 525 KSPAEAKSPEKEEAKSPAEVKSPEK 549
Score = 40.0 bits (92), Expect = 0.002
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 177 AGAAAPEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKL 236
A +PE +EA S EA S PE A + + E A+ PAE + K ++ E
Sbjct: 576 AEVKSPEKAKSPAKEEAKSPAEAKS-PEKA-KSPVKEEAKSPAEAKSPVKEEAKSPAEVK 633
Query: 237 TEEATEEPAAEEPTS-EEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEK 287
+ E + P EE S E+A +PE+ PEK A+ E K EK K
Sbjct: 634 SPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEK----AKSPVKAEAKSPEKAK 681
Score = 39.7 bits (91), Expect = 0.003
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 204 EPAVPADLAEMAREPAEEAADEKP---PEEAAEEKLTEEATEEPAAEEPTSEEAVAPEEV 260
EPAV EEA D+K PE+ A K+ E E+ +E T P++
Sbjct: 879 EPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKV--EVKEDAKPKEKTEVAKKEPDDA 936
Query: 261 TKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVK 294
+P K E+ + A +++ ++EK K E K K
Sbjct: 937 KAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPK 970
Score = 39.3 bits (90), Expect = 0.004
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 28/134 (20%)
Query: 190 IQEAASVQEAASVPEPAVPADLAEM-----AREPAEEAADEKPPEEAAEEKLTEEATEEP 244
++E A E A PE A D+ A+E A AD+ P E A+ + EE
Sbjct: 740 VKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFP--EKAKSPVKEEVKSPE 797
Query: 245 AAEEPTSEEAVAPEEV---------------------TKSQPEKWDEEAQDAAGEEEKEQ 283
A+ P E+A APE+ K P+K +EE A + E+++
Sbjct: 798 KAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKK 857
Query: 284 EKEKDVENKVKNSK 297
+ +K+ K + K
Sbjct: 858 DSKKEEAPKKEAPK 871
Score = 37.0 bits (84), Expect = 0.021
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 15/108 (13%)
Query: 195 SVQEAASVPEPAVPADLAEMAREPAEEAADEKP--PEEAAEEKLTE---EATEEPAAEE- 248
S +E V E + E E E+ A E+ EE EE+ E E T+ P AEE
Sbjct: 450 SEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEA 509
Query: 249 ---------PTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEK 287
P EEA +P E + E+ A+ + E+ K KE+
Sbjct: 510 ASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEE 557
Score = 37.0 bits (84), Expect = 0.021
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 202 VPEPAVPADLAEMAREPAEEAADEKPPE-----EAAEEK--LTEEATEEPAAEEPTSEEA 254
V E A P + E+A++ ++A ++P + EAA EK EE ++P + T +A
Sbjct: 916 VKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKA 975
Query: 255 VAPEEVTKSQPEK-WDEEAQDAAGEEEKEQE-KEKDVENKVKNSK 297
++ +P K E+A+ ++ ++K+ + EK E+K K
Sbjct: 976 KEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKAAKGK 1020
Score = 35.8 bits (81), Expect = 0.047
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 203 PEPAVPADLAEMAREPA----EEAADEKPPEEAAEEKLTEEATEEPAAEEPTSEEAVAPE 258
P+ P E +EPA +E+ E EEA ++K +E A+ E+A E
Sbjct: 865 PKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKE 924
Query: 259 EVTKSQPEKWDEEAQDAAGEEEKEQ---EKEKDVENKVK 294
+ ++ E D +A++ + EK++ EK+ E K K
Sbjct: 925 KTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAK 963
Score = 33.9 bits (76), Expect = 0.18
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 201 SVPE--PAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAEEPTSEEAVAPE 258
S+PE P +P+ + + E+ + E+ E + EE TEE E +EE
Sbjct: 421 SLPEGLPKIPSVSTHIKVKSEEKIKVVEKSEK--ETVIVEEQTEETQVTEEVTEEEEKEA 478
Query: 259 EVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSK 297
+ + + E+ EE + GEEE + ++ + K +K
Sbjct: 479 KEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAK 517
Score = 33.9 bits (76), Expect = 0.18
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 216 REPAEEAADEK-PPEEAAEEKLTEEATEEPAAE--EPTSEEAVAP--EEVTKSQPEKWDE 270
+EP ++A +EK P EEK + E P E +P EE P E+ +S+ E E
Sbjct: 836 KEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKE 895
Query: 271 EAQDAAGEEEKEQEKEKDVENK 292
EA+D E+E VE K
Sbjct: 896 EAEDKKKVPTPEKEAPAKVEVK 917
Score = 30.4 bits (67), Expect = 2.0
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 200 ASVPEPAVPADLAEMA---REPAEEAA---DEKPPEEAAEEKLTEEATEEPAAEEPTSEE 253
A EP+ PA+ E A ++ EE A +EKP EA ++ + ++EP+ + E
Sbjct: 936 AKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAE 995
Query: 254 AVAPEEVTKSQPEKWDEEAQDAAGE 278
+ + S+P + E + A G+
Sbjct: 996 KSSSTDQKDSKPPEKATEDKAAKGK 1020
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 48.9 bits (115), Expect = 5e-06
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Query: 166 PPLLLLSQRLGAGAAAPEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADE 225
P ++ L Q GAA+ EGE GL + +E V DL + E A
Sbjct: 192 PGIVHLLQEAAEGAASEEGEK-GLFIQPEDAEEVVEVTTER-SQDLCPQSLEDAASEESS 249
Query: 226 KPPEEAAEEKLTEEATEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEK 285
K + E+ EE EE EE EE EE + + E+ +EE ++ EEE+E+E
Sbjct: 250 KQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEE--EEEEEEEA 307
Query: 286 EKDV 289
DV
Sbjct: 308 APDV 311
Score = 44.7 bits (104), Expect = 1e-04
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 21/127 (16%)
Query: 187 LGLIQEAASVQE---AASVPEPAVPADLAEMAREPAEEAADEK---PPEEAAE------- 233
LG I E V+E A+ P P + L E A A E ++ PE+A E
Sbjct: 171 LGQIAEETLVEEDLGQAAKPGPGIVHLLQEAAEGAASEEGEKGLFIQPEDAEEVVEVTTE 230
Query: 234 --EKLTEEATEEPAAEEPTSEEAVAP------EEVTKSQPEKWDEEAQDAAGEEEKEQEK 285
+ L ++ E+ A+EE + ++ + EE + + E+ DEE ++ EEE+E+E+
Sbjct: 231 RSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEE 290
Query: 286 EKDVENK 292
E++ E +
Sbjct: 291 EEEEEEE 297
Score = 28.1 bits (61), Expect = 9.8
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 58 VEGLGEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNE 102
+E EE + G+ + + EE+ + +EEEEEEE E
Sbjct: 240 LEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEE 284
Score = 28.1 bits (61), Expect = 9.8
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 63 EEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAA 104
EEE E+ + EE+ + EEEEEEEE EAA
Sbjct: 267 EEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAA 308
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 47.0 bits (110), Expect = 2e-05
Identities = 73/316 (23%), Positives = 123/316 (38%), Gaps = 66/316 (20%)
Query: 5 GDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEGLGEE 64
G++ +G +E EGA+++ A +EGG SS+ +E
Sbjct: 525 GEKEEEEGQEEEEEEDEGAKSDQA----EEGGSEKEGSSE------------------KE 562
Query: 65 EGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGIGFVF 124
EGEQ G AE + + A EE++ EE+ E A + VA +
Sbjct: 563 EGEQEEGET------EAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAK---------- 606
Query: 125 LYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAG---AAA 181
V + + + S + P + V +P + G +
Sbjct: 607 ---VEKPEKAKSPVPKSPVEEKGKSPV---PKSPVEEKGKSPVPKSPVEEKGKSPVPKSP 660
Query: 182 PEGEGLGLIQEAASVQEAASVPEPAVPADLAEM--------AREPAEEAADEKPPEEAAE 233
E +G + ++ ++A S P P P + A+ +E E+ E P EE E
Sbjct: 661 VEEKGKSPVSKSPVEEKAKS-PVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVE 719
Query: 234 --EKLTEEATEEPAAEEPTSEEAVAP-EEVTKSQPEKWDEEAQDAAGEEEKEQEKEK--- 287
E+ ++ E+ AE P EEAVA +TKS ++E ++ ++E+EKEK
Sbjct: 720 KKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGG 779
Query: 288 ----DVENKVKNSKGT 299
+ E K +KG+
Sbjct: 780 EGGSEEEGSDKGAKGS 795
Score = 45.8 bits (107), Expect = 5e-05
Identities = 69/298 (23%), Positives = 115/298 (38%), Gaps = 59/298 (19%)
Query: 14 QEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEGLGEEEGE------ 67
+E VS + + EAA +E P++ + AA+ V + EEEGE
Sbjct: 478 EELAVSMKEEKKEAAEEKEEE-----PEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEG 532
Query: 68 --------QAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAG 119
+ A +GGS +E G + +EE E+EEG A + A +
Sbjct: 533 QEEEEEEDEGAKSDQAEEGGSEKE----GSSEKEEGEQEEGETEAEAEGEEAEAKE---- 584
Query: 120 IGFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGA 179
+ ++A + L+ P +P
Sbjct: 585 -------------EKKVEEKSEEVATK--EELVADAKVEKPEKAKSP----------VPK 619
Query: 180 AAPEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEE 239
+ E +G + + + V+E P P P + E + P ++ E+ + + EE
Sbjct: 620 SPVEEKGKSPVPK-SPVEEKGKSPVPKSPVE--EKGKSPVPKSPVEEKGKSPVSKSPVEE 676
Query: 240 ATEEPAAEEPTSEEAVAPEEVTK-SQPEKWDEEAQDAAGEE--EKEQEKEKDVENKVK 294
+ P + P EEA + EV K Q E+ ++E ++A EE EK++EK KDV K K
Sbjct: 677 KAKSPVPKSPV-EEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKK 733
Score = 44.7 bits (104), Expect = 1e-04
Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 190 IQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTE-EATEEPAAEE 248
I E V++ S E A+ A E+A EE +EAAEEK E EA EE A +
Sbjct: 456 IIEETKVEDEKSEMEEALTAITEELAVSMKEEK------KEAAEEKEEEPEAEEEEVAAK 509
Query: 249 PTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
+ +A APE V + + EK +EE Q+ EEE E K E +G+
Sbjct: 510 KSPVKATAPE-VKEEEGEKEEEEGQEEE-EEEDEGAKSDQAEEGGSEKEGS 558
Score = 31.2 bits (69), Expect = 1.2
Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 7/126 (5%)
Query: 179 AAAPEGEGLGLIQEAASVQEAASVPEPAVPADLAEMA------REPAEEAADEKPPEEAA 232
A APE + +E QE + +D AE EE E+ EA
Sbjct: 515 ATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAE 574
Query: 233 EEKLTEEATEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENK 292
E EA EE EE SEE EE+ + E+A+ + E++ + V
Sbjct: 575 AEGEEAEAKEEKKVEEK-SEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKS 633
Query: 293 VKNSKG 298
KG
Sbjct: 634 PVEEKG 639
Score = 30.8 bits (68), Expect = 1.5
Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 3/112 (2%)
Query: 183 EGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATE 242
EGE A S+ P P ++ ++P EA K + EE + EE
Sbjct: 406 EGEETRFSTFAGSITGPLYTHRP--PITISSKIQKPKVEAPKLKVQHKFVEE-IIEETKV 462
Query: 243 EPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVK 294
E E EE+ S E+ E A++ E E E+E+ ++ VK
Sbjct: 463 EDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVK 514
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 47.0 bits (110), Expect = 2e-05
Identities = 73/316 (23%), Positives = 123/316 (38%), Gaps = 66/316 (20%)
Query: 5 GDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEGLGEE 64
G++ +G +E EGA+++ A +EGG SS+ +E
Sbjct: 149 GEKEEEEGQEEEEEEDEGAKSDQA----EEGGSEKEGSSE------------------KE 186
Query: 65 EGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGIGFVF 124
EGEQ G AE + + A EE++ EE+ E A + VA +
Sbjct: 187 EGEQEEGET------EAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAK---------- 230
Query: 125 LYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAG---AAA 181
V + + + S + P + V +P + G +
Sbjct: 231 ---VEKPEKAKSPVPKSPVEEKGKSPV---PKSPVEEKGKSPVPKSPVEEKGKSPVPKSP 284
Query: 182 PEGEGLGLIQEAASVQEAASVPEPAVPADLAEM--------AREPAEEAADEKPPEEAAE 233
E +G + ++ ++A S P P P + A+ +E E+ E P EE E
Sbjct: 285 VEEKGKSPVSKSPVEEKAKS-PVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVE 343
Query: 234 --EKLTEEATEEPAAEEPTSEEAVAP-EEVTKSQPEKWDEEAQDAAGEEEKEQEKEK--- 287
E+ ++ E+ AE P EEAVA +TKS ++E ++ ++E+EKEK
Sbjct: 344 KKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGG 403
Query: 288 ----DVENKVKNSKGT 299
+ E K +KG+
Sbjct: 404 EGGSEEEGSDKGAKGS 419
Score = 45.8 bits (107), Expect = 5e-05
Identities = 69/298 (23%), Positives = 115/298 (38%), Gaps = 59/298 (19%)
Query: 14 QEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEGLGEEEGE------ 67
+E VS + + EAA +E P++ + AA+ V + EEEGE
Sbjct: 102 EELAVSMKEEKKEAAEEKEEE-----PEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEG 156
Query: 68 --------QAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAG 119
+ A +GGS +E G + +EE E+EEG A + A +
Sbjct: 157 QEEEEEEDEGAKSDQAEEGGSEKE----GSSEKEEGEQEEGETEAEAEGEEAEAKE---- 208
Query: 120 IGFVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGA 179
+ ++A + L+ P +P
Sbjct: 209 -------------EKKVEEKSEEVATK--EELVADAKVEKPEKAKSP----------VPK 243
Query: 180 AAPEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEE 239
+ E +G + + + V+E P P P + E + P ++ E+ + + EE
Sbjct: 244 SPVEEKGKSPVPK-SPVEEKGKSPVPKSPVE--EKGKSPVPKSPVEEKGKSPVSKSPVEE 300
Query: 240 ATEEPAAEEPTSEEAVAPEEVTK-SQPEKWDEEAQDAAGEE--EKEQEKEKDVENKVK 294
+ P + P EEA + EV K Q E+ ++E ++A EE EK++EK KDV K K
Sbjct: 301 KAKSPVPKSPV-EEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKK 357
Score = 44.7 bits (104), Expect = 1e-04
Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 190 IQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTE-EATEEPAAEE 248
I E V++ S E A+ A E+A EE +EAAEEK E EA EE A +
Sbjct: 80 IIEETKVEDEKSEMEEALTAITEELAVSMKEEK------KEAAEEKEEEPEAEEEEVAAK 133
Query: 249 PTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
+ +A APE V + + EK +EE Q+ EEE E K E +G+
Sbjct: 134 KSPVKATAPE-VKEEEGEKEEEEGQEEE-EEEDEGAKSDQAEEGGSEKEGS 182
Score = 31.2 bits (69), Expect = 1.2
Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 7/126 (5%)
Query: 179 AAAPEGEGLGLIQEAASVQEAASVPEPAVPADLAEMA------REPAEEAADEKPPEEAA 232
A APE + +E QE + +D AE EE E+ EA
Sbjct: 139 ATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAE 198
Query: 233 EEKLTEEATEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENK 292
E EA EE EE SEE EE+ + E+A+ + E++ + V
Sbjct: 199 AEGEEAEAKEEKKVEEK-SEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKS 257
Query: 293 VKNSKG 298
KG
Sbjct: 258 PVEEKG 263
Score = 30.8 bits (68), Expect = 1.5
Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 3/112 (2%)
Query: 183 EGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATE 242
EGE A S+ P P ++ ++P EA K + EE + EE
Sbjct: 30 EGEETRFSTFAGSITGPLYTHRP--PITISSKIQKPKVEAPKLKVQHKFVEE-IIEETKV 86
Query: 243 EPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVK 294
E E EE+ S E+ E A++ E E E+E+ ++ VK
Sbjct: 87 EDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVK 138
>gi|68348716 AF4/FMR2 family, member 3 isoform 2 [Homo sapiens]
Length = 1251
Score = 46.6 bits (109), Expect = 3e-05
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 193 AASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEAT----EEPAAEE 248
A +V +A+ P PAVP AE A PA +A +KP + A EEPAA +
Sbjct: 578 AVAVAVSAAAPPPAVPCAPAENAPAPARRSAGKKPTRRTERTSAGDGANCHRPEEPAAAD 637
Query: 249 PTSEEAVAPEEVTKSQP 265
V P E TK++P
Sbjct: 638 ALGTSVVVPPEPTKTRP 654
>gi|68348714 AF4/FMR2 family, member 3 isoform 1 [Homo sapiens]
Length = 1226
Score = 46.6 bits (109), Expect = 3e-05
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 193 AASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEAT----EEPAAEE 248
A +V +A+ P PAVP AE A PA +A +KP + A EEPAA +
Sbjct: 553 AVAVAVSAAAPPPAVPCAPAENAPAPARRSAGKKPTRRTERTSAGDGANCHRPEEPAAAD 612
Query: 249 PTSEEAVAPEEVTKSQP 265
V P E TK++P
Sbjct: 613 ALGTSVVVPPEPTKTRP 629
>gi|157738619 smoothelin-like 1 [Homo sapiens]
Length = 512
Score = 46.2 bits (108), Expect = 3e-05
Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 13/138 (9%)
Query: 164 DNPPLLLLSQRLGAGAAAPEGEGLG--LIQEAASVQEAASVPEPAVPADLAEMAREP--A 219
DNP + G GA A E +G I E + PA AE+ E
Sbjct: 38 DNPEMS------GGGAPAEETKGTAGKAINEGPPTESGKQEKAPAEDGMSAELQGEANGL 91
Query: 220 EEAADEKPPEEAAEEKLTEEATEEPAAEEPT---SEEAVAPEEVTKSQPEKWDEEAQDAA 276
+E E E +E E +E +E T S+E +E TKS+P++ +E+ A
Sbjct: 92 DEVKVESQREAGGKEDAEAELKKEDGEKEETTVGSQEMTGRKEETKSEPKEAEEKESTLA 151
Query: 277 GEEEKEQEKEKDVENKVK 294
E++K +EKE E+ K
Sbjct: 152 SEKQKAEEKEAKPESGQK 169
Score = 45.1 bits (105), Expect = 8e-05
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 192 EAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAEEPTS 251
+A +E A E + EP E+A DE+ E+ + + +EA EP +EP
Sbjct: 181 KATVEEEDAKTASQEETGQRKECSTEPKEKATDEEAKAESQKAVVEDEAKAEP--KEPDG 238
Query: 252 EEAV---APEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVE 290
+E A EE + + EEA+ + EE+EQ+ EK+ E
Sbjct: 239 KEEAKHGAKEEADAKEEAEDAEEAEPGSPSEEQEQDVEKEPE 280
Score = 36.2 bits (82), Expect = 0.036
Identities = 61/282 (21%), Positives = 98/282 (34%), Gaps = 48/282 (17%)
Query: 14 QEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEGLGEEEGEQAAGLA 73
+E +S++G A + G P A + + P E +E+ G++
Sbjct: 22 KEGKLSEDGTTVSPAADNPEMSGGGAPAEETKGTAGKAINEGPPTESGKQEKAPAEDGMS 81
Query: 74 AVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGIGFVFLYLVHSLLR 133
A QG E + + E + E G E A +L +G
Sbjct: 82 AELQG----EANGLDEVKVESQREAGGKEDAEAELKKEDGEKEETTVG------------ 125
Query: 134 RLYHNDHIQIANRHLSRLMVGPHAAV---PNLWDNPPLLLLSQRLGAGAAAPEGEGLGLI 190
S+ M G P + L S++ A E E
Sbjct: 126 ---------------SQEMTGRKEETKSEPKEAEEKESTLASEK----QKAEEKEAKPES 166
Query: 191 QEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAEEPT 250
+ A + PEP + + EE K +EK T+ EE AE
Sbjct: 167 GQKADANDRDK-PEPKATVEEEDAKTASQEETGQRKECSTEPKEKATD---EEAKAE--- 219
Query: 251 SEEAVAPEEVTKSQPEKWD--EEAQDAAGEEEKEQEKEKDVE 290
S++AV +E K++P++ D EEA+ A EE +E+ +D E
Sbjct: 220 SQKAVVEDE-AKAEPKEPDGKEEAKHGAKEEADAKEEAEDAE 260
Score = 35.0 bits (79), Expect = 0.080
Identities = 66/284 (23%), Positives = 96/284 (33%), Gaps = 63/284 (22%)
Query: 3 ATGDRHPTQ-GDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEGL 61
A + PT+ G QE +++G AE G N G D + E G L
Sbjct: 59 AINEGPPTESGKQEKAPAEDGMSAELQGEAN------GLDEVKVESQREAGGKEDAEAEL 112
Query: 62 GEEEGEQAAGLAAVPQGGSAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGIG 121
+E+GE+ + +E++ P +E EE+E A+ A P +G
Sbjct: 113 KKEDGEKEETTVGSQEMTGRKEETKSEP---KEAEEKESTLASEKQKAEEKEAKPESG-- 167
Query: 122 FVFLYLVHSLLRRLYHNDHIQIANRHLSRLMVGPHAAVPNLWDNPPLLLLSQRLGAGAAA 181
A N D P + A A+
Sbjct: 168 ----------------------------------QKADANDRDKPEPKATVEEEDAKTAS 193
Query: 182 PEGEGLGL-----IQEAASVQEAASVPEPAVPADLA----------EMAREPAEEAADEK 226
E G +E A+ +EA + + AV D A E A+ A+E AD K
Sbjct: 194 QEETGQRKECSTEPKEKATDEEAKAESQKAVVEDEAKAEPKEPDGKEEAKHGAKEEADAK 253
Query: 227 PPEEAAEEKLTEEATEEPAAEEPTSEEAVAPEEVTKSQPEKWDE 270
E AEE +EE E+ +E V S PE+W E
Sbjct: 254 EEAEDAEEAEPGSPSEE--QEQDVEKEPEGGAGVIPSSPEEWPE 295
Score = 34.3 bits (77), Expect = 0.14
Identities = 38/134 (28%), Positives = 55/134 (41%), Gaps = 22/134 (16%)
Query: 179 AAAPEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAA-------------DE 225
+A +GE GL + Q A E A AE+ +E E+ +
Sbjct: 81 SAELQGEANGLDEVKVESQREAGGKEDAE----AELKKEDGEKEETTVGSQEMTGRKEET 136
Query: 226 KPPEEAAEEKLTEEATEEPAAEE----PTSEEAVAPEEVTKSQPEKW-DEEAQDAAGEEE 280
K + AEEK + A+E+ AEE P S + + K +P+ +EE A +EE
Sbjct: 137 KSEPKEAEEKESTLASEKQKAEEKEAKPESGQKADANDRDKPEPKATVEEEDAKTASQEE 196
Query: 281 KEQEKEKDVENKVK 294
Q KE E K K
Sbjct: 197 TGQRKECSTEPKEK 210
Score = 33.5 bits (75), Expect = 0.23
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Query: 197 QEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAEEPTSEEAVA 256
+E S P+ A + + +A E + E PE + + EP A + A
Sbjct: 134 EETKSEPKEAEEKE-STLASEKQKAEEKEAKPESGQKADANDRDKPEPKATVEEEDAKTA 192
Query: 257 PEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVK 294
+E T + E E + A EE K + ++ VE++ K
Sbjct: 193 SQEETGQRKECSTEPKEKATDEEAKAESQKAVVEDEAK 230
Score = 31.2 bits (69), Expect = 1.2
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 18/110 (16%)
Query: 189 LIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTE--EATEEPAA 246
L E +E + PE AD + + + +E+ + A++E+ + E + EP
Sbjct: 150 LASEKQKAEEKEAKPESGQKADANDRDKPEPKATVEEEDAKTASQEETGQRKECSTEPK- 208
Query: 247 EEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEE-KEQEKEKDVENKVKN 295
E+ T EEA A E+Q A E+E K + KE D + + K+
Sbjct: 209 EKATDEEAKA--------------ESQKAVVEDEAKAEPKEPDGKEEAKH 244
Score = 29.6 bits (65), Expect = 3.4
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 222 AADEKPPEEAAEEKLTEEATE-EPAAEEPTSEEAVAPEEVTKSQPEK-WDEEAQDAAGEE 279
+A+ + E E KL+E+ T PAA+ P AP E TK K +E +G++
Sbjct: 12 SAEAREKMEQKEGKLSEDGTTVSPAADNPEMSGGGAPAEETKGTAGKAINEGPPTESGKQ 71
Query: 280 EK 281
EK
Sbjct: 72 EK 73
>gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo
sapiens]
Length = 525
Score = 45.8 bits (107), Expect = 5e-05
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 204 EPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAEEPTSEEAVAPEEVTKS 263
+P VP+ E E EE +E+ EE EE+ +E E+P P E+ + P +
Sbjct: 304 QPPVPSSPTE--EEEEEEEEEEEEAEEEEEEEDSEVQGEQPKPASPAEEDKMPPYD---E 358
Query: 264 QPEKWDEEAQDAAGEEEKEQEKEKDVENKVKN 295
Q + + + AQ+A + E+ + KD+E ++N
Sbjct: 359 QTQAFIDAAQEARNKFEEAERSLKDMEESIRN 390
Score = 33.5 bits (75), Expect = 0.23
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 231 AAEEKLTEEA--TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKD 288
A +K EA T+ PA P E + S P + +EE ++ EE +E+E+E+D
Sbjct: 275 AIRDKYRSEALPTDLPAPSAPDLTEPKEEQPPVPSSPTEEEEEEEEEEEEEAEEEEEEED 334
Query: 289 VE 290
E
Sbjct: 335 SE 336
Score = 33.5 bits (75), Expect = 0.23
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 240 ATEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENK 292
A P EP E+ P T+ + E+ +EE ++A EE+E+E++ +V+ +
Sbjct: 291 APSAPDLTEPKEEQPPVPSSPTEEEEEEEEEEEEEA---EEEEEEEDSEVQGE 340
Score = 30.0 bits (66), Expect = 2.6
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 224 DEKPPEEAAEEKLTEEATEEPAAEEPTS------EEAVAPEEVTKSQPEK-WDEEAQDAA 276
D K E ++KL E + + E+ EEA PE K Q +K W+E+ A
Sbjct: 147 DWKKAREEKQKKLIELQAGKKSLEDQVEMLRTVKEEAEKPEREAKEQHQKLWEEQLAAAK 206
Query: 277 GEEEKE 282
++E+E
Sbjct: 207 AQQEQE 212
>gi|116235474 LKB1 interacting protein [Homo sapiens]
Length = 1099
Score = 45.4 bits (106), Expect = 6e-05
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 198 EAASVPEPAVPADLAEMAREPAEEAADE----KPPEEAAE------EKLTEEATEEPAAE 247
E + P PA P A A + + D PP+E A +K++EE EP E
Sbjct: 449 EPSGNPLPATPTTSAPSAPPASSQGPDTAPRPSPPQEEARGPQESPQKMSEEVRAEPQEE 508
Query: 248 EPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVE 290
E EE EE + + E+ ++ AGEEE+E++ +K+VE
Sbjct: 509 E---EEKEGKEE---KEEGEMVEQGEEEAGEEEEEEQDQKEVE 545
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 45.1 bits (105), Expect = 8e-05
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 205 PAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAEEPTSEEAVAPEEVTKSQ 264
PA+ DL + ++E +E+ EE EE+ EE EE EE EE EE + +
Sbjct: 872 PALEEDLTVININSSDEEEEEEEEEEEEEEE--EEEEEEDFEEEEEDEEEYFEEEEEEEE 929
Query: 265 P--EKWDEEAQDAAGEEEKEQEKEKDVENKVKN 295
E+++EE + EEE+E E+E++ +V++
Sbjct: 930 EFEEEFEEEEGELEEEEEEEDEEEEEELEEVED 962
Score = 40.0 bits (92), Expect = 0.002
Identities = 26/96 (27%), Positives = 41/96 (42%)
Query: 203 PEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAEEPTSEEAVAPEEVTK 262
P P VP + + E A EE LT EE EE EE +
Sbjct: 845 PPPPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEEEEEEEEEEEEEEE 904
Query: 263 SQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKG 298
+ E ++EE +D E+E+E+E++ E + + +G
Sbjct: 905 EEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEG 940
Score = 39.3 bits (90), Expect = 0.004
Identities = 40/136 (29%), Positives = 56/136 (41%), Gaps = 16/136 (11%)
Query: 155 PHAAVPNLWDNPPLLLLSQRLGAGAAAPEGEGLGLIQEAASVQEAASVPEPAVPADLAEM 214
P VP PP L+ + P G G ++E +V S E + E
Sbjct: 845 PPPPVPGPVTLPPPQLVPE------GTPGGGGPPALEEDLTVININSSDEEEEEEEEEEE 898
Query: 215 AREPAEEAADEKPPEEAAEEKLTEEATEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQD 274
E EE ++ EE EE+ EE EE EE EE E + + E+ DE
Sbjct: 899 EEEEEEEEEEDFEEEEEDEEEYFEEEEEE---EEEFEEEFEEEEGELEEEEEEEDE---- 951
Query: 275 AAGEEEKEQEKEKDVE 290
EEE+E E+ +D+E
Sbjct: 952 ---EEEEELEEVEDLE 964
Score = 33.5 bits (75), Expect = 0.23
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 13/100 (13%)
Query: 191 QEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAEEPT 250
+E A ++ A+P+ E+ RE E A PP+E E EEP+A PT
Sbjct: 1015 EEERGADTAPTLAPEALPSQ-GEVERE-GESPAAGPPPQELVE--------EEPSA-PPT 1063
Query: 251 --SEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKD 288
EE + + PE EE + E E QEKE+D
Sbjct: 1064 LLEEETEDGSDKVQPPPETPAEEEMETETEAEALQEKEQD 1103
Score = 30.4 bits (67), Expect = 2.0
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 204 EPAVPADLAEMAREPAEEAAD--EKPPEEAAEEKLTEEATEEPAAEEPTSEEAVA 256
EP+ P L E E E+ +D + PPE AEE++ E TE A +E ++ A
Sbjct: 1057 EPSAPPTLLE---EETEDGSDKVQPPPETPAEEEM-ETETEAEALQEKEQDDTAA 1107
Score = 29.6 bits (65), Expect = 3.4
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 11/93 (11%)
Query: 217 EPAEEAADEKPPEEAAEEKLTEEAT-----EEPAAEEPTSEEAV-APEEVTKSQPEKWDE 270
E EE DE+ EE E + E T EE A PT A+ PE K QPE E
Sbjct: 943 EEEEEEEDEEEEEELEEVEDLEFGTAGGEVEEGAPPPPTLPPALPPPESPPKVQPEPEPE 1002
Query: 271 -----EAQDAAGEEEKEQEKEKDVENKVKNSKG 298
E ++ EEE+ + + + S+G
Sbjct: 1003 PGLLLEVEEPGTEEERGADTAPTLAPEALPSQG 1035
Score = 29.6 bits (65), Expect = 3.4
Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 17/105 (16%)
Query: 203 PEPAVPADLAEMAREPAEEAADEKP---PEEAAEEKLTEEATEEPAAEEP----TSEEAV 255
PEP + ++ E E E AD P PE + E E PAA P EE
Sbjct: 1001 PEPGLLLEVEEPGTEE-ERGADTAPTLAPEALPSQGEVEREGESPAAGPPPQELVEEEPS 1059
Query: 256 AP----EEVTKSQPEKWDEEAQDAAGEE-----EKEQEKEKDVEN 291
AP EE T+ +K + A EE E E +EK+ ++
Sbjct: 1060 APPTLLEEETEDGSDKVQPPPETPAEEEMETETEAEALQEKEQDD 1104
Score = 29.3 bits (64), Expect = 4.4
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 12/79 (15%)
Query: 24 QAEAAGAGNQEGGDSGPDSSDMVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPQGGSAEE 83
+ E G + G D+ P + P A P +G E EGE A A P E
Sbjct: 1008 EVEEPGTEEERGADTAPT---LAPEAL------PSQGEVEREGESPA---AGPPPQELVE 1055
Query: 84 DSDIGPATEEEEEEEEGNE 102
+ P T EEE E+G++
Sbjct: 1056 EEPSAPPTLLEEETEDGSD 1074
>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
sapiens]
Length = 528
Score = 44.7 bits (104), Expect = 1e-04
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 203 PEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAEEPTSEEAVAPEEVTK 262
P P+ P + E E EE A+E+ EE +EE + +PA+ P E+ + P +
Sbjct: 306 PVPSSPTEEEEEEEEEEEEEAEEEEEEEDSEEAPPPLSPPQPAS--PAEEDKMPPYD--- 360
Query: 263 SQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKN 295
Q + + + AQ+A + E+ + KD+E ++N
Sbjct: 361 EQTQAFIDAAQEARNKFEEAERSLKDMEESIRN 393
Score = 34.7 bits (78), Expect = 0.10
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 240 ATEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKE 286
A P EP E+ P T+ + E+ +EE ++A EEE+E +E
Sbjct: 291 APSAPDLTEPKEEQPPVPSSPTEEEEEEEEEEEEEAEEEEEEEDSEE 337
Score = 33.5 bits (75), Expect = 0.23
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 231 AAEEKLTEEA--TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKD 288
A +K EA T+ PA P E + S P + +EE ++ EE +E+E+E+D
Sbjct: 275 AIRDKYRSEALPTDLPAPSAPDLTEPKEEQPPVPSSPTEEEEEEEEEEEEEAEEEEEEED 334
Query: 289 VE 290
E
Sbjct: 335 SE 336
Score = 30.0 bits (66), Expect = 2.6
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 224 DEKPPEEAAEEKLTEEATEEPAAEEPTS------EEAVAPEEVTKSQPEK-WDEEAQDAA 276
D K E ++KL E + + E+ EEA PE K Q +K W+E+ A
Sbjct: 147 DWKKAREEKQKKLIELQAGKKSLEDQVEMLRTVKEEAEKPEREAKEQHQKLWEEQLAAAK 206
Query: 277 GEEEKE 282
++E+E
Sbjct: 207 AQQEQE 212
>gi|93204861 protein phosphatase 1, regulatory (inhibitor) subunit
9A [Homo sapiens]
Length = 1098
Score = 44.7 bits (104), Expect = 1e-04
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 182 PEGEGLGLIQEAASVQEAASVPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEAT 241
P G+ E A A VPE V + +A P EE K PE++ + T ++
Sbjct: 259 PPSNKRGVDTEDAHKSNATPVPE--VASKSTSLASIPGEEIQQSKEPEDSTSNQQTPDSI 316
Query: 242 EEPAAEEPTSEEAVAPE-EVTKSQPEKWDEEAQDAAGEEEKEQEKEK 287
++ EEP +E P+ E+ Q + ++ + G E +Q++++
Sbjct: 317 DKDGPEEPCAESKAMPKSEIPSPQSQLLEDAEANLVGREAAKQQRKE 363
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
sapiens]
Length = 2524
Score = 44.3 bits (103), Expect = 1e-04
Identities = 58/239 (24%), Positives = 87/239 (36%), Gaps = 37/239 (15%)
Query: 80 SAEEDSDIGPATEEEEEEEEGNEAANFDLAVATRRYPAAGIGFVFLYLVHSLLRRLYHND 139
+A E++ P E+EE E G ++ A+G + + R +
Sbjct: 689 AASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEALHASG----------NEVPRGECSG 738
Query: 140 HIQIANRHLSRLMVGPHA-AVPNLWDN---PPLLLLSQRLGAGAAAPEGEGLGLIQEAAS 195
+ N + + PH A + N PP L + G P E + E
Sbjct: 739 PATVNNSSDTESIPSPHTEAAKDTGQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTP 798
Query: 196 VQEAA------------SVPEPAVPADLAE---MAREPAEEAADEKPPEEAAEEKLTEEA 240
EA S P P VP + E A P EE ++KPP AAEE A
Sbjct: 799 ASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEEGEEQKPP--AAEEL----A 852
Query: 241 TEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKVKNSKGT 299
+ AEEP E EE + + D EA +A E + EK++ + +K +
Sbjct: 853 VDTGKAEEPVKSECT--EEAEEGPAKGKDAEAAEATAEGALKAEKKEGGSGRATTAKSS 909
Score = 34.3 bits (77), Expect = 0.14
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Query: 191 QEAASVQEAASVPEP-AVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAEEP 249
Q+ Q+ P P + + E +E E +EKP E +E L +E T++ + E+
Sbjct: 499 QQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDN 558
Query: 250 TSEEAVAPE--EVTKSQPEKWDEEAQDAAGEEEKEQ 283
+EAVA + + SQ + + A E E+
Sbjct: 559 DEKEAVASKGRKTANSQGRRKGRITRSMANEANSEE 594
Score = 32.7 bits (73), Expect = 0.40
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 213 EMAREPAEEAADEKPPEEAAEEKLTEEATEEPAAEEPTSEEAVAPEEVTKSQPEKWDEEA 272
+ ++ ++ + P + EEK +E +E EE E E++ K E+
Sbjct: 498 QQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLK-------EKT 550
Query: 273 QDAAGEEEKEQEKEKDVENKVKNSKG 298
D +GE+ E+E K NS+G
Sbjct: 551 DDTSGEDNDEKEAVASKGRKTANSQG 576
Score = 28.1 bits (61), Expect = 9.8
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 16/89 (17%)
Query: 204 EPAVPADLAEMAREPAEEAADEKPPE-EAAEEKLTEEATEE---------PAAEEPTSEE 253
+P V D ++ +E ++ + E E EA K + A + A E SEE
Sbjct: 535 KPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRITRSMANEANSEE 594
Query: 254 AVAPEEVTK------SQPEKWDEEAQDAA 276
A+ P++ + ++ +W EE + A
Sbjct: 595 AITPQQSAELASMELNESSRWTEEEMETA 623
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.301 0.123 0.337
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,837,841
Number of Sequences: 37866
Number of extensions: 797347
Number of successful extensions: 16439
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 755
Number of HSP's that attempted gapping in prelim test: 6427
Number of HSP's gapped (non-prelim): 7001
length of query: 299
length of database: 18,247,518
effective HSP length: 102
effective length of query: 197
effective length of database: 14,385,186
effective search space: 2833881642
effective search space used: 2833881642
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.