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Search of human proteins with 224465242
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|224465242 BTB (POZ) domain containing 8 [Homo sapiens]
(378 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224465242 BTB (POZ) domain containing 8 [Homo sapiens] 761 0.0
gi|25777626 ankyrin repeat and BTB (POZ) domain containing 1 iso... 65 8e-11
gi|25777624 ankyrin repeat and BTB (POZ) domain containing 1 iso... 65 8e-11
gi|57242759 regulator of chromosome condensation (RCC1) and BTB ... 64 3e-10
gi|57863304 inhibitor of Bruton's tyrosine kinase [Homo sapiens] 63 4e-10
gi|48717263 speckle-type POZ protein-like [Homo sapiens] 62 8e-10
gi|209571547 kelch repeat and BTB (POZ) domain containing 4 isof... 59 5e-09
gi|209693446 kelch repeat and BTB (POZ) domain containing 4 isof... 59 7e-09
gi|5174473 intracisternal A particle-promoted polypeptide isofor... 58 2e-08
gi|223890235 intracisternal A particle-promoted polypeptide isof... 58 2e-08
gi|11056006 kelch-like 12 [Homo sapiens] 58 2e-08
gi|40018614 DRE1 protein [Homo sapiens] 57 3e-08
gi|55925604 kelch-like 18 [Homo sapiens] 57 4e-08
gi|24432026 kelch-like [Homo sapiens] 55 8e-08
gi|148664209 kelch-like 10 [Homo sapiens] 55 1e-07
gi|56117834 speckle-type POZ protein [Homo sapiens] 55 1e-07
gi|56117832 speckle-type POZ protein [Homo sapiens] 55 1e-07
gi|56117830 speckle-type POZ protein [Homo sapiens] 55 1e-07
gi|56117828 speckle-type POZ protein [Homo sapiens] 55 1e-07
gi|4507183 speckle-type POZ protein [Homo sapiens] 55 1e-07
gi|56117836 speckle-type POZ protein [Homo sapiens] 55 1e-07
gi|55925608 kelch-like 21 [Homo sapiens] 54 2e-07
gi|223468659 kelch repeat and BTB (POZ) domain containing 2 [Hom... 54 2e-07
gi|40807500 kelch-like 20 [Homo sapiens] 53 4e-07
gi|14780904 kelch-like 1 protein [Homo sapiens] 52 9e-07
gi|156616301 kelch-like 32 [Homo sapiens] 52 9e-07
gi|14211841 ankyrin repeat and BTB (POZ) domain containing 1 iso... 52 1e-06
gi|151108413 BTB (POZ) domain containing 9 isoform a [Homo sapiens] 51 1e-06
gi|151108411 BTB (POZ) domain containing 9 isoform a [Homo sapiens] 51 1e-06
gi|44680141 BTB (POZ) domain containing 5 [Homo sapiens] 51 1e-06
>gi|224465242 BTB (POZ) domain containing 8 [Homo sapiens]
Length = 378
Score = 761 bits (1965), Expect = 0.0
Identities = 378/378 (100%), Positives = 378/378 (100%)
Query: 1 MARCGEGSAAPMVLLGSAGVCSKGLQRKGPCERRRLKATVSEQLSQDLLRLLREEFHTDV 60
MARCGEGSAAPMVLLGSAGVCSKGLQRKGPCERRRLKATVSEQLSQDLLRLLREEFHTDV
Sbjct: 1 MARCGEGSAAPMVLLGSAGVCSKGLQRKGPCERRRLKATVSEQLSQDLLRLLREEFHTDV 60
Query: 61 TFSVGCTLFKAHKAVLLARVPDFYFHTIGQTSNSLTNQEPIAVENVEALEFRTFLQIIYS 120
TFSVGCTLFKAHKAVLLARVPDFYFHTIGQTSNSLTNQEPIAVENVEALEFRTFLQIIYS
Sbjct: 61 TFSVGCTLFKAHKAVLLARVPDFYFHTIGQTSNSLTNQEPIAVENVEALEFRTFLQIIYS 120
Query: 121 SNRNIKNYEEEILRKKIMEIGISQKQLDISFPKCENSSDCSLQKHEIPEDISDRDDDFIS 180
SNRNIKNYEEEILRKKIMEIGISQKQLDISFPKCENSSDCSLQKHEIPEDISDRDDDFIS
Sbjct: 121 SNRNIKNYEEEILRKKIMEIGISQKQLDISFPKCENSSDCSLQKHEIPEDISDRDDDFIS 180
Query: 181 NDNYDLEPASELGEDLLKLYVKPCCPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWA 240
NDNYDLEPASELGEDLLKLYVKPCCPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWA
Sbjct: 181 NDNYDLEPASELGEDLLKLYVKPCCPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWA 240
Query: 241 ESSQEYVTLQGISHVELNVMMHFIYGGTLDIPDKTNVGQILNMADMYGLEGLKEVAIYIL 300
ESSQEYVTLQGISHVELNVMMHFIYGGTLDIPDKTNVGQILNMADMYGLEGLKEVAIYIL
Sbjct: 241 ESSQEYVTLQGISHVELNVMMHFIYGGTLDIPDKTNVGQILNMADMYGLEGLKEVAIYIL 300
Query: 301 RRDYCNFFQKPVPRTLTSILECLIIAHSVGVESLFADCMKWIVKHFARFWSERSFANIPP 360
RRDYCNFFQKPVPRTLTSILECLIIAHSVGVESLFADCMKWIVKHFARFWSERSFANIPP
Sbjct: 301 RRDYCNFFQKPVPRTLTSILECLIIAHSVGVESLFADCMKWIVKHFARFWSERSFANIPP 360
Query: 361 EIQKSCLNMLIQSLVSIT 378
EIQKSCLNMLIQSLVSIT
Sbjct: 361 EIQKSCLNMLIQSLVSIT 378
>gi|25777626 ankyrin repeat and BTB (POZ) domain containing 1
isoform 3 [Homo sapiens]
Length = 453
Score = 65.5 bits (158), Expect = 8e-11
Identities = 76/271 (28%), Positives = 112/271 (41%), Gaps = 31/271 (11%)
Query: 48 LLRLLREEFHTDVTFSVGCTLFKAHKAVLLARVPDFYFHTIGQTSNSLTNQEPIAVENVE 107
L RLL + H+DV F V F+ H+ VL AR YF + T + + +
Sbjct: 80 LQRLLEQGIHSDVVFVVHGKPFRVHRCVLGAR--SAYFANMLDTKWKGKSVVVLRHPLIN 137
Query: 108 ALEFRTFLQIIYSSNRNIKNYEEEILRKKIMEIGISQKQLDISFPKCENSSDCSLQK--- 164
+ F LQ +Y+ +I + + + D+ KCE S+ K
Sbjct: 138 PVAFGALLQYLYTGRLDIGVEHVSDCERLAKQCQLWDLLSDLE-AKCEKVSEFVASKPGT 196
Query: 165 -------HEIPEDISDRDDDFISNDNYDLEPASELGEDLLKLYVKPC------CPDIDIF 211
P D R+D + D L P EL DL +L PC CPDI
Sbjct: 197 CVKVLTIEPPPADPRLREDMALLAD-CALPP--ELRGDLWELPF-PCPDGFNSCPDICFR 252
Query: 212 VDGKRFKAHRAILSARSSYFAAMLSGCWAESSQ-------EYVTLQGISHVELNVMMHFI 264
V G F H+A RS YF A+L + ES + VTL GIS +++++
Sbjct: 253 VAGCSFLCHKAFFCGRSDYFRALLDDHFRESEEPATSGGPPAVTLHGISPDVFTHVLYYM 312
Query: 265 YGGTLDIPDKTNVGQILNMADMYGLEGLKEV 295
Y ++ + +L++ADMY L GLK +
Sbjct: 313 YSDHTELSPEA-AYDVLSVADMYLLPGLKRL 342
>gi|25777624 ankyrin repeat and BTB (POZ) domain containing 1
isoform 2 [Homo sapiens]
Length = 478
Score = 65.5 bits (158), Expect = 8e-11
Identities = 76/271 (28%), Positives = 112/271 (41%), Gaps = 31/271 (11%)
Query: 48 LLRLLREEFHTDVTFSVGCTLFKAHKAVLLARVPDFYFHTIGQTSNSLTNQEPIAVENVE 107
L RLL + H+DV F V F+ H+ VL AR YF + T + + +
Sbjct: 105 LQRLLEQGIHSDVVFVVHGKPFRVHRCVLGAR--SAYFANMLDTKWKGKSVVVLRHPLIN 162
Query: 108 ALEFRTFLQIIYSSNRNIKNYEEEILRKKIMEIGISQKQLDISFPKCENSSDCSLQK--- 164
+ F LQ +Y+ +I + + + D+ KCE S+ K
Sbjct: 163 PVAFGALLQYLYTGRLDIGVEHVSDCERLAKQCQLWDLLSDLE-AKCEKVSEFVASKPGT 221
Query: 165 -------HEIPEDISDRDDDFISNDNYDLEPASELGEDLLKLYVKPC------CPDIDIF 211
P D R+D + D L P EL DL +L PC CPDI
Sbjct: 222 CVKVLTIEPPPADPRLREDMALLAD-CALPP--ELRGDLWELPF-PCPDGFNSCPDICFR 277
Query: 212 VDGKRFKAHRAILSARSSYFAAMLSGCWAESSQ-------EYVTLQGISHVELNVMMHFI 264
V G F H+A RS YF A+L + ES + VTL GIS +++++
Sbjct: 278 VAGCSFLCHKAFFCGRSDYFRALLDDHFRESEEPATSGGPPAVTLHGISPDVFTHVLYYM 337
Query: 265 YGGTLDIPDKTNVGQILNMADMYGLEGLKEV 295
Y ++ + +L++ADMY L GLK +
Sbjct: 338 YSDHTELSPEA-AYDVLSVADMYLLPGLKRL 367
>gi|57242759 regulator of chromosome condensation (RCC1) and BTB
(POZ) domain containing protein 1 [Homo sapiens]
Length = 531
Score = 63.5 bits (153), Expect = 3e-10
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 192 LGEDLLKLYVKPCCPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYVTLQG 251
+ E L K + P D+ +DGK H+A+L R +F +M W E +E + +
Sbjct: 356 VAESLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSYWNEDMKEVIEIDQ 415
Query: 252 ISHVELNVMMHFIYGGTLDIPDKTNVGQILNMADMYGLEGLKEVAIYILRRDYCNFFQKP 311
S+ + ++Y T+D+P + +G +L++A Y LK++ +I++R
Sbjct: 416 FSYPVYRAFLQYLYTDTVDLPPEDAIG-LLDLATSYCENRLKKLCQHIIKRGI------- 467
Query: 312 VPRTLTSILECLIIAHSVGVESLFADCMKWIVKHF------ARFW 350
T+ + A E L C K+ + H A FW
Sbjct: 468 ---TVENAFSLFSAAVRYDAEDLEEFCFKFCINHLTEVTQTAAFW 509
>gi|57863304 inhibitor of Bruton's tyrosine kinase [Homo sapiens]
Length = 1353
Score = 63.2 bits (152), Expect = 4e-10
Identities = 92/385 (23%), Positives = 139/385 (36%), Gaps = 77/385 (20%)
Query: 36 LKATVSEQLSQDLLRLLREEFHTD----VTFSVGCTLFKAHKAVLLARVPDFY------- 84
+ A S ++ +LLRE D VTF VG LF AHK +L DF+
Sbjct: 538 IPAVSSSSFFEEFGKLLREADEMDSIHDVTFQVGNRLFPAHKYILAVH-SDFFQKLFLSD 596
Query: 85 -----FHTIGQTSNSLTNQEPIAVENVEALEFRTFLQIIY-------------------- 119
F I Q VE V F LQ IY
Sbjct: 597 GNTSEFTDIYQKDEDSAGCHLFVVEKVHPDMFEYLLQFIYTDTCDFLTHGFKPRIHLNKN 656
Query: 120 --------SSNRNIKNYEEEILRKKIMEIGISQKQLDISFPKCENSSDCSLQKHEIPED- 170
+S+ N N+ E+ +K E+ S + +S + C K+ +D
Sbjct: 657 PEEYQGTLNSHLNKVNFHEDDNQKSAFEVYKSNQAQTVSERQKSKPKSCKKGKNIREDDP 716
Query: 171 ------ISDRDD--------DFISNDNYDLEPASELGEDLLKLYVKPCCPDIDI---FVD 213
++ + D D + +N + ++ + LKL K C D+ VD
Sbjct: 717 VRMLQTVAKKFDFSNLSSRLDGVRFENEKINVIAKNTGNKLKLSQKKCSFLCDVTMKSVD 776
Query: 214 GKRFKAHRAILSARSSYFAAMLSGCWAESSQEYVTLQGISHVELNVMMHFIY-GGTLDIP 272
GK F H+ +L AR YF +MLS W E+S I L V++ ++Y + I
Sbjct: 777 GKEFPCHKCVLCARLEYFHSMLSSSWIEASSCAALEMPIHSDILKVILDYLYTDEAVVIK 836
Query: 273 DKTNVG---QILNMADMYGLEGLKEVAIYILRRDYCNFFQKPVPRTLTSILECLIIAHSV 329
+ NV +L +AD + LKE+ L TL + L A
Sbjct: 837 ESQNVDFICSVLVVADQLLITRLKEICEVALTEKL----------TLKNAAMLLEFAAMY 886
Query: 330 GVESLFADCMKWIVKHFARFWSERS 354
+ L C+++I + A RS
Sbjct: 887 SAKQLKLSCLQFIGLNMAALLEARS 911
>gi|48717263 speckle-type POZ protein-like [Homo sapiens]
Length = 392
Score = 62.0 bits (149), Expect = 8e-10
Identities = 42/114 (36%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 180 SNDNYDLEPASELGEDLLKLYVKPCCPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGCW 239
+N N P L EDL L+ D FV G+ FKAH+++L+ARS F AM
Sbjct: 174 TNTNTLKVPECRLAEDLGNLWENTRFTDCSFFVRGQEFKAHKSVLAARSPVFNAMFEHEM 233
Query: 240 AESSQEYVTLQGISHVELNVMMHFIYGGTLDIPDKTNVGQILNMADMYGLEGLK 293
ES + V + + MM FIY G DK +L AD Y LE LK
Sbjct: 234 EESKKNRVEINDLDPEVFKEMMRFIYTGRAPNLDKM-ADNLLAAADKYALERLK 286
Score = 36.2 bits (82), Expect = 0.050
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 43 QLSQDLLRLLREEFHTDVTFSVGCTLFKAHKAVLLARVPDFYFHTIGQTSNSLTNQEPIA 102
+L++DL L TD +F V FKAHK+VL AR P F+ + + + + +
Sbjct: 185 RLAEDLGNLWENTRFTDCSFFVRGQEFKAHKSVLAARSP--VFNAMFEHEMEESKKNRVE 242
Query: 103 VENVEALEFRTFLQIIYS 120
+ +++ F+ ++ IY+
Sbjct: 243 INDLDPEVFKEMMRFIYT 260
>gi|209571547 kelch repeat and BTB (POZ) domain containing 4 isoform
a [Homo sapiens]
Length = 534
Score = 59.3 bits (142), Expect = 5e-09
Identities = 39/144 (27%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 162 LQKHEIPEDI-SDRDDDFISNDNY-DLEPASELGEDLLKLYVKP-CCPDIDIFVDGKRFK 218
L E PE+ + D+++ N + D + + + ++KL ++ D+ I V+G+ F+
Sbjct: 14 LASMESPEEPGASMDENYFVNYTFKDRSHSGRVAQGIMKLCLEEELFADVTISVEGREFQ 73
Query: 219 AHRAILSARSSYFAAMLSGCWAESSQEYVTLQGISHVELNVMMHFIYGGTLDIPDKTNVG 278
HR +LSA+S +F +M + E+ + LQ +S +++ +IY GT+ + + +
Sbjct: 74 LHRLVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRAE-ELQ 132
Query: 279 QILNMADMYGLEGLKEVAIYILRR 302
+I ++DMY L L E L R
Sbjct: 133 EIYEVSDMYQLTSLFEECSRFLAR 156
>gi|209693446 kelch repeat and BTB (POZ) domain containing 4 isoform
b [Homo sapiens]
Length = 518
Score = 58.9 bits (141), Expect = 7e-09
Identities = 38/140 (27%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 166 EIPEDI-SDRDDDFISNDNY-DLEPASELGEDLLKLYVKP-CCPDIDIFVDGKRFKAHRA 222
E PE+ + D+++ N + D + + + ++KL ++ D+ I V+G+ F+ HR
Sbjct: 2 ESPEEPGASMDENYFVNYTFKDRSHSGRVAQGIMKLCLEEELFADVTISVEGREFQLHRL 61
Query: 223 ILSARSSYFAAMLSGCWAESSQEYVTLQGISHVELNVMMHFIYGGTLDIPDKTNVGQILN 282
+LSA+S +F +M + E+ + LQ +S +++ +IY GT+ + + + +I
Sbjct: 62 VLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRAE-ELQEIYE 120
Query: 283 MADMYGLEGLKEVAIYILRR 302
++DMY L L E L R
Sbjct: 121 VSDMYQLTSLFEECSRFLAR 140
>gi|5174473 intracisternal A particle-promoted polypeptide isoform 1
[Homo sapiens]
Length = 584
Score = 57.8 bits (138), Expect = 2e-08
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 207 DIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYVTLQGISHVELNVMMHFIYG 266
D+ + V + FKAHR +L+A S YFAA+ +G ESS++ V + GI +++ FIY
Sbjct: 38 DVQLQVGQESFKAHRLVLAASSPYFAALFTGGMKESSKDVVPILGIEAGIFQILLDFIYT 97
Query: 267 GTLDIPDKTNVGQILNMADMYGL 289
G ++I NV +++ ADM L
Sbjct: 98 GIVNI-GVNNVQELIIAADMLQL 119
>gi|223890235 intracisternal A particle-promoted polypeptide isoform
2 [Homo sapiens]
Length = 582
Score = 57.8 bits (138), Expect = 2e-08
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 207 DIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYVTLQGISHVELNVMMHFIYG 266
D+ + V + FKAHR +L+A S YFAA+ +G ESS++ V + GI +++ FIY
Sbjct: 38 DVQLQVGQESFKAHRLVLAASSPYFAALFTGGMKESSKDVVPILGIEAGIFQILLDFIYT 97
Query: 267 GTLDIPDKTNVGQILNMADMYGL 289
G ++I NV +++ ADM L
Sbjct: 98 GIVNI-GVNNVQELIIAADMLQL 119
>gi|11056006 kelch-like 12 [Homo sapiens]
Length = 568
Score = 57.8 bits (138), Expect = 2e-08
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 207 DIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYVTLQGISHVELNVMMHFIYG 266
D+ + V+ K F AHR +L+A S YF AM + +E + YV +QG++ + +++ F+Y
Sbjct: 34 DVTLRVEQKDFPAHRIVLAACSDYFCAMFTSELSEKGKPYVDIQGLTASTMEILLDFVYT 93
Query: 267 GTLDIPDKTNVGQILNMADMYGLEGLKEVAIYIL 300
T+ + + NV ++L A + L+G+K+ L
Sbjct: 94 ETVHVTVE-NVQELLPAACLLQLKGVKQACCEFL 126
>gi|40018614 DRE1 protein [Homo sapiens]
Length = 600
Score = 57.0 bits (136), Expect = 3e-08
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 169 EDISDRDDDFISNDNYDLEPASELG-------------EDLLKLYVK----PCCPDIDIF 211
ED+ RD ++++P S G E++L+++ + D+ I
Sbjct: 12 EDLGVRDSPATKRKVFEMDPKSLTGHEFFDFSSGSSHAENILQIFNEFRDSRLFTDVIIC 71
Query: 212 VDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYVTLQGISHVELNVMMHFIYGGTLDI 271
V+GK F HRA+LSA SSYF AM ES + V + GI + + ++Y G + I
Sbjct: 72 VEGKEFPCHRAVLSACSSYFRAMFCNDHRESREMLVEINGILAEAMECFLQYVYTGKVKI 131
Query: 272 PDKTNVGQILNMADMYGLEGLKEVAIYILRR--DYCN 306
+ NV + + ++ + L++ L D CN
Sbjct: 132 TTE-NVQYLFETSSLFQISVLRDACAKFLEEQLDPCN 167
>gi|55925604 kelch-like 18 [Homo sapiens]
Length = 574
Score = 56.6 bits (135), Expect = 4e-08
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 207 DIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYVTLQGISHVELNVMMHFIYG 266
D+ + + +F AHR +L+A YF AM + E Q+ + +QG+ L +++F Y
Sbjct: 39 DVTLKIGDHKFSAHRIVLAASIPYFHAMFTNDMMECKQDEIVMQGMDPSALEALINFAYN 98
Query: 267 GTLDIPDKTNVGQILNMADMYGLEGLKEVAIYILRRDYCNFFQKPVPRTLTSILECLIIA 326
G L I D+ NV +L A L+ +K+ LR ++ P+ + + A
Sbjct: 99 GNLAI-DQQNVQSLLMGASFLQLQSIKDACCTFLR-------ERLHPKNCLGVRQ---FA 147
Query: 327 HSVGVESLFADCMKWIVKHFARFWSERSFANIPPE 361
++ L+ +I +HF F +P E
Sbjct: 148 ETMMCAVLYDAANSFIHQHFVEVSMSEEFLALPLE 182
Score = 35.8 bits (81), Expect = 0.065
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 59 DVTFSVGCTLFKAHKAVLLARVPDFYFHTIGQTSNSLTNQEPIAVENVEALEFRTFLQII 118
DVT +G F AH+ VL A +P YFH + Q+ I ++ ++ +
Sbjct: 39 DVTLKIGDHKFSAHRIVLAASIP--YFHAMFTNDMMECKQDEIVMQGMDPSALEALINFA 96
Query: 119 YSSN 122
Y+ N
Sbjct: 97 YNGN 100
>gi|24432026 kelch-like [Homo sapiens]
Length = 634
Score = 55.5 bits (132), Expect = 8e-08
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 11/190 (5%)
Query: 179 ISNDNYDLEPASELGEDLLKLYVKPCCPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGC 238
++N + + L LL L D+ + V+G+ +AHR +L+A YF M +G
Sbjct: 23 VNNTYRSAQHSQALLRGLLALRDSGILFDVVLVVEGRHIEAHRILLAASCDYFRGMFAGG 82
Query: 239 WAESSQEYVTLQGISHVELNVMMHFIYGGTLDIPDKTNVGQILNMADMYGLEGLKEVAIY 298
E QE V + G+S+ + ++HFIY L++ +NV + L A ++ I
Sbjct: 83 LKEMEQEEVLIHGVSYNAMCQILHFIYTSELEL-SLSNVQETLVAA--------CQLQIP 133
Query: 299 ILRRDYCNFFQKPVPRTLTSILECLIIAHSVGVESLFADCMKWIVKHFARFWSERSFANI 358
+ C+F V +IL+ +A + L +I+K+F F + +
Sbjct: 134 EIIHFCCDFLMSWVDE--ENILDVYRLAELFDLSRLTEQLDTYILKNFVAFSRTDKYRQL 191
Query: 359 PPEIQKSCLN 368
P E S L+
Sbjct: 192 PLEKVYSLLS 201
>gi|148664209 kelch-like 10 [Homo sapiens]
Length = 608
Score = 54.7 bits (130), Expect = 1e-07
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 197 LKLYVKPCCPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYVTLQGISHVE 256
L+L K C D+ I V+G F AH+ IL + SSYF A+ + W + ++ + GIS
Sbjct: 32 LRLEGKLC--DVVIKVNGFEFSAHKNILCSCSSYFRALFTSGWNNTEKKVYNIPGISPDM 89
Query: 257 LNVMMHFIYGGTLDI-PDKTNVGQILNMADMYGLEGLKEVAIYILRRDYC 305
+ +++ + Y T+ I PD NV ++L AD + + G+ L+ + C
Sbjct: 90 MKLIIEYAYTRTVPITPD--NVEKLLAAADQFNIMGIVRGCCEFLKSELC 137
>gi|56117834 speckle-type POZ protein [Homo sapiens]
Length = 374
Score = 54.7 bits (130), Expect = 1e-07
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 188 PASELGEDLLKLYVKPCCPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYV 247
P L ++L L+ D + V G+ F+AH+AIL+ARS F+AM ES + V
Sbjct: 182 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRV 241
Query: 248 TLQGISHVELNVMMHFIYGGTLDIPDKTNVGQILNMADMYGLEGLK 293
+ + MM FIY G DK +L AD Y LE LK
Sbjct: 242 EINDVEPEVFKEMMCFIYTGKAPNLDKM-ADDLLAAADKYALERLK 286
Score = 32.3 bits (72), Expect = 0.72
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 43 QLSQDLLRLLREEFHTDVTFSVGCTLFKAHKAVLLARVPDFYFHTIGQTSNSLTNQEPIA 102
+L+ +L L TD V F+AHKA+L AR P F + S N+ +
Sbjct: 185 RLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR--VE 242
Query: 103 VENVEALEFRTFLQIIYSSNR-NIKNYEEEIL 133
+ +VE F+ + IY+ N+ +++L
Sbjct: 243 INDVEPEVFKEMMCFIYTGKAPNLDKMADDLL 274
>gi|56117832 speckle-type POZ protein [Homo sapiens]
Length = 374
Score = 54.7 bits (130), Expect = 1e-07
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 188 PASELGEDLLKLYVKPCCPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYV 247
P L ++L L+ D + V G+ F+AH+AIL+ARS F+AM ES + V
Sbjct: 182 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRV 241
Query: 248 TLQGISHVELNVMMHFIYGGTLDIPDKTNVGQILNMADMYGLEGLK 293
+ + MM FIY G DK +L AD Y LE LK
Sbjct: 242 EINDVEPEVFKEMMCFIYTGKAPNLDKM-ADDLLAAADKYALERLK 286
Score = 32.3 bits (72), Expect = 0.72
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 43 QLSQDLLRLLREEFHTDVTFSVGCTLFKAHKAVLLARVPDFYFHTIGQTSNSLTNQEPIA 102
+L+ +L L TD V F+AHKA+L AR P F + S N+ +
Sbjct: 185 RLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR--VE 242
Query: 103 VENVEALEFRTFLQIIYSSNR-NIKNYEEEIL 133
+ +VE F+ + IY+ N+ +++L
Sbjct: 243 INDVEPEVFKEMMCFIYTGKAPNLDKMADDLL 274
>gi|56117830 speckle-type POZ protein [Homo sapiens]
Length = 374
Score = 54.7 bits (130), Expect = 1e-07
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 188 PASELGEDLLKLYVKPCCPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYV 247
P L ++L L+ D + V G+ F+AH+AIL+ARS F+AM ES + V
Sbjct: 182 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRV 241
Query: 248 TLQGISHVELNVMMHFIYGGTLDIPDKTNVGQILNMADMYGLEGLK 293
+ + MM FIY G DK +L AD Y LE LK
Sbjct: 242 EINDVEPEVFKEMMCFIYTGKAPNLDKM-ADDLLAAADKYALERLK 286
Score = 32.3 bits (72), Expect = 0.72
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 43 QLSQDLLRLLREEFHTDVTFSVGCTLFKAHKAVLLARVPDFYFHTIGQTSNSLTNQEPIA 102
+L+ +L L TD V F+AHKA+L AR P F + S N+ +
Sbjct: 185 RLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR--VE 242
Query: 103 VENVEALEFRTFLQIIYSSNR-NIKNYEEEIL 133
+ +VE F+ + IY+ N+ +++L
Sbjct: 243 INDVEPEVFKEMMCFIYTGKAPNLDKMADDLL 274
>gi|56117828 speckle-type POZ protein [Homo sapiens]
Length = 374
Score = 54.7 bits (130), Expect = 1e-07
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 188 PASELGEDLLKLYVKPCCPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYV 247
P L ++L L+ D + V G+ F+AH+AIL+ARS F+AM ES + V
Sbjct: 182 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRV 241
Query: 248 TLQGISHVELNVMMHFIYGGTLDIPDKTNVGQILNMADMYGLEGLK 293
+ + MM FIY G DK +L AD Y LE LK
Sbjct: 242 EINDVEPEVFKEMMCFIYTGKAPNLDKM-ADDLLAAADKYALERLK 286
Score = 32.3 bits (72), Expect = 0.72
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 43 QLSQDLLRLLREEFHTDVTFSVGCTLFKAHKAVLLARVPDFYFHTIGQTSNSLTNQEPIA 102
+L+ +L L TD V F+AHKA+L AR P F + S N+ +
Sbjct: 185 RLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR--VE 242
Query: 103 VENVEALEFRTFLQIIYSSNR-NIKNYEEEIL 133
+ +VE F+ + IY+ N+ +++L
Sbjct: 243 INDVEPEVFKEMMCFIYTGKAPNLDKMADDLL 274
>gi|4507183 speckle-type POZ protein [Homo sapiens]
Length = 374
Score = 54.7 bits (130), Expect = 1e-07
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 188 PASELGEDLLKLYVKPCCPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYV 247
P L ++L L+ D + V G+ F+AH+AIL+ARS F+AM ES + V
Sbjct: 182 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRV 241
Query: 248 TLQGISHVELNVMMHFIYGGTLDIPDKTNVGQILNMADMYGLEGLK 293
+ + MM FIY G DK +L AD Y LE LK
Sbjct: 242 EINDVEPEVFKEMMCFIYTGKAPNLDKM-ADDLLAAADKYALERLK 286
Score = 32.3 bits (72), Expect = 0.72
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 43 QLSQDLLRLLREEFHTDVTFSVGCTLFKAHKAVLLARVPDFYFHTIGQTSNSLTNQEPIA 102
+L+ +L L TD V F+AHKA+L AR P F + S N+ +
Sbjct: 185 RLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR--VE 242
Query: 103 VENVEALEFRTFLQIIYSSNR-NIKNYEEEIL 133
+ +VE F+ + IY+ N+ +++L
Sbjct: 243 INDVEPEVFKEMMCFIYTGKAPNLDKMADDLL 274
>gi|56117836 speckle-type POZ protein [Homo sapiens]
Length = 374
Score = 54.7 bits (130), Expect = 1e-07
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 188 PASELGEDLLKLYVKPCCPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYV 247
P L ++L L+ D + V G+ F+AH+AIL+ARS F+AM ES + V
Sbjct: 182 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRV 241
Query: 248 TLQGISHVELNVMMHFIYGGTLDIPDKTNVGQILNMADMYGLEGLK 293
+ + MM FIY G DK +L AD Y LE LK
Sbjct: 242 EINDVEPEVFKEMMCFIYTGKAPNLDKM-ADDLLAAADKYALERLK 286
Score = 32.3 bits (72), Expect = 0.72
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 43 QLSQDLLRLLREEFHTDVTFSVGCTLFKAHKAVLLARVPDFYFHTIGQTSNSLTNQEPIA 102
+L+ +L L TD V F+AHKA+L AR P F + S N+ +
Sbjct: 185 RLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR--VE 242
Query: 103 VENVEALEFRTFLQIIYSSNR-NIKNYEEEIL 133
+ +VE F+ + IY+ N+ +++L
Sbjct: 243 INDVEPEVFKEMMCFIYTGKAPNLDKMADDLL 274
>gi|55925608 kelch-like 21 [Homo sapiens]
Length = 597
Score = 54.3 bits (129), Expect = 2e-07
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 11/140 (7%)
Query: 214 GKRFKAHRAILSARSSYFAAMLSGCWAESSQEYVTLQGISHVELNVMMHFIYGGTLDIPD 273
G+ F AHRA+L+A S YF AM +G ES E V L G+ L +++ F Y G + +
Sbjct: 44 GRDFPAHRAVLAAASPYFRAMFAGQLRESRAERVRLHGVPPDMLQLLLDFSYTGRVAV-S 102
Query: 274 KTNVGQILNMADMYGLEGLKEVAIYILRRDYCNFFQKPVPRTLTSILECLIIAHSVGVES 333
N +L AD+ +KE L++ L + L+ A +
Sbjct: 103 GDNAEPLLRAADLLQFPAVKEACGAFLQQQL----------DLANCLDMQDFAEAFSCSG 152
Query: 334 LFADCMKWIVKHFARFWSER 353
L + ++I++H +E+
Sbjct: 153 LASAAQRFILRHVGELGAEQ 172
>gi|223468659 kelch repeat and BTB (POZ) domain containing 2 [Homo
sapiens]
Length = 623
Score = 53.9 bits (128), Expect = 2e-07
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 187 EPASELGEDLLKLYVKPCCPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEY 246
E A L E L Y + DI + V+G F H+ +L+ SSYF AM +ES Q +
Sbjct: 12 EYAVSLLEQLKLFYEQQLFTDIVLIVEGTEFPCHKMVLATCSSYFRAMFMSGLSESKQTH 71
Query: 247 VTLQGISHVELNVMMHFIYGGTLDIPDKTNVGQILNMADMYGLEG-LKEVAIYILRR 302
V L+ + L +++ + Y G L + D T V Q+ A +E L+ Y++++
Sbjct: 72 VHLRNVDAATLQIIITYAYTGNLAMNDST-VEQLYETACFLQVEDVLQRCREYLIKK 127
Score = 33.1 bits (74), Expect = 0.42
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Query: 32 ERRRLKATVSEQLSQDLLRLLREEFHTDVTFSVGCTLFKAHKAVLLARVPDFYFHTIGQT 91
+ R++ + L + L ++ TD+ V T F HK VL YF + +
Sbjct: 5 DERQINTEYAVSLLEQLKLFYEQQLFTDIVLIVEGTEFPCHKMVL--ATCSSYFRAMFMS 62
Query: 92 SNSLTNQEPIAVENVEALEFRTFLQIIYSSN 122
S + Q + + NV+A + + Y+ N
Sbjct: 63 GLSESKQTHVHLRNVDAATLQIIITYAYTGN 93
>gi|40807500 kelch-like 20 [Homo sapiens]
Length = 609
Score = 53.1 bits (126), Expect = 4e-07
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 195 DLLKLYVKPCCPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYVTLQGISH 254
+LL+ + + C D+ + V K+ AHR ILSA S YF AM +G AES Q V ++ I
Sbjct: 59 NLLRKHRELC--DVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRDIDE 116
Query: 255 VELNVMMHFIYGGTLDIPDKTNVGQILNMADMYGLEGLKEVAIYILRR 302
+ +++ F Y + + ++ NV +L A + L ++E L+R
Sbjct: 117 RAMELLIDFAYTSQITV-EEGNVQTLLPAACLLQLAEIQEACCEFLKR 163
>gi|14780904 kelch-like 1 protein [Homo sapiens]
Length = 748
Score = 52.0 bits (123), Expect = 9e-07
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 207 DIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYVTLQGISHVELNVMMHFIYG 266
D+ + V ++ AHR +LS+ S YFAAM + E+ QE + ++GI L ++ F Y
Sbjct: 213 DVILIVGNRKIPAHRLVLSSVSDYFAAMFTSDVCEAKQEEIKMEGIDPNALWDLVQFAYT 272
Query: 267 GTLDIPDKTNVGQILNMADMYGLEGLKEVAIYILRR 302
G L++ + T + +L A + L + EV + L +
Sbjct: 273 GCLELKEDT-IENLLAAACLLQLPQVVEVCCHFLMK 307
>gi|156616301 kelch-like 32 [Homo sapiens]
Length = 620
Score = 52.0 bits (123), Expect = 9e-07
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 207 DIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYVTLQGISHVELNVMMHFIYG 266
DI + + ++F AH+A+L+A S YF AM S C ES + V L G++ + L + F Y
Sbjct: 43 DITLIAEEQKFHAHKAVLAACSDYFRAMFSLCMVESGADEVNLHGVTSLGLKQALEFAYT 102
Query: 267 GTL 269
G +
Sbjct: 103 GQI 105
>gi|14211841 ankyrin repeat and BTB (POZ) domain containing 1
isoform 1 [Homo sapiens]
Length = 336
Score = 51.6 bits (122), Expect = 1e-06
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 15/118 (12%)
Query: 191 ELGEDLLKLYVKPC------CPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQ 244
EL DL +L PC CPDI V G F H+A RS YF A+L + ES +
Sbjct: 110 ELRGDLWELPF-PCPDGFNSCPDICFRVAGCSFLCHKAFFCGRSDYFRALLDDHFRESEE 168
Query: 245 -------EYVTLQGISHVELNVMMHFIYGGTLDIPDKTNVGQILNMADMYGLEGLKEV 295
VTL GIS +++++Y ++ + +L++ADMY L GLK +
Sbjct: 169 PATSGGPPAVTLHGISPDVFTHVLYYMYSDHTELSPEA-AYDVLSVADMYLLPGLKRL 225
>gi|151108413 BTB (POZ) domain containing 9 isoform a [Homo sapiens]
Length = 612
Score = 51.2 bits (121), Expect = 1e-06
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 207 DIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQE-YVTLQGISHVELNVMMHFIY 265
D+ V+ KRF AHR IL+AR YF A+L G ES E + LQ + +++ +IY
Sbjct: 37 DVTFVVEKKRFPAHRVILAARCQYFRALLYGGMRESQPEAEIPLQDTTAEAFTMLLKYIY 96
Query: 266 GGTLDIPDKTN--VGQILNMADMYGLEGLKE 294
G + D+ + L++A YG L++
Sbjct: 97 TGRATLTDEKEEVLLDFLSLAHKYGFPELED 127
Score = 39.7 bits (91), Expect = 0.005
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 44 LSQDLLRLLREEFHTDVTFSVGCTLFKAHKAVLLARVPDFYFHTIGQTSNSLTNQEPIAV 103
LS+ + LL E + DVTF V F AH+ +L AR F G S E I +
Sbjct: 22 LSEHIGALLIGEEYGDVTFVVEKKRFPAHRVILAARCQYFRALLYGGMRESQPEAE-IPL 80
Query: 104 ENVEALEFRTFLQIIYSSNRNIKNYEEEILRKKIMEIGISQKQLDISFPKCENSS 158
++ A F L+ IY+ + + +EE+L + + ++ K FP+ E+S+
Sbjct: 81 QDTTAEAFTMLLKYIYTGRATLTDEKEEVL---LDFLSLAHK---YGFPELEDST 129
>gi|151108411 BTB (POZ) domain containing 9 isoform a [Homo sapiens]
Length = 612
Score = 51.2 bits (121), Expect = 1e-06
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 207 DIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQE-YVTLQGISHVELNVMMHFIY 265
D+ V+ KRF AHR IL+AR YF A+L G ES E + LQ + +++ +IY
Sbjct: 37 DVTFVVEKKRFPAHRVILAARCQYFRALLYGGMRESQPEAEIPLQDTTAEAFTMLLKYIY 96
Query: 266 GGTLDIPDKTN--VGQILNMADMYGLEGLKE 294
G + D+ + L++A YG L++
Sbjct: 97 TGRATLTDEKEEVLLDFLSLAHKYGFPELED 127
Score = 39.7 bits (91), Expect = 0.005
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 44 LSQDLLRLLREEFHTDVTFSVGCTLFKAHKAVLLARVPDFYFHTIGQTSNSLTNQEPIAV 103
LS+ + LL E + DVTF V F AH+ +L AR F G S E I +
Sbjct: 22 LSEHIGALLIGEEYGDVTFVVEKKRFPAHRVILAARCQYFRALLYGGMRESQPEAE-IPL 80
Query: 104 ENVEALEFRTFLQIIYSSNRNIKNYEEEILRKKIMEIGISQKQLDISFPKCENSS 158
++ A F L+ IY+ + + +EE+L + + ++ K FP+ E+S+
Sbjct: 81 QDTTAEAFTMLLKYIYTGRATLTDEKEEVL---LDFLSLAHK---YGFPELEDST 129
>gi|44680141 BTB (POZ) domain containing 5 [Homo sapiens]
Length = 571
Score = 51.2 bits (121), Expect = 1e-06
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 20/189 (10%)
Query: 193 GEDLLKLYVKPCCPDIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYVTLQGI 252
G +LL+ + + C DI + V + AH+ +L++ S YF AM +G +E V Q I
Sbjct: 24 GLNLLRQHHELC--DIILRVGDVKIHAHKVVLASVSPYFKAMFTGNLSEKENSEVEFQCI 81
Query: 253 SHVELNVMMHFIYGGTLDIPDKTNVGQILNMADMYGLEGLKEVAIYILRRDYCNFFQKPV 312
L ++ + Y GT+ I T V +L A++ + I ++ ++ C F + +
Sbjct: 82 DETALQAIVEYAYTGTVFISQDT-VESLLPAANL--------LQIKLVLKECCAFLESQL 132
Query: 313 -PRTLTSILECLIIAHSVGVESLFADCMKWIVKHFARFWSERSF-----ANIPPEIQKSC 366
P I A + G L+ K+I ++F F A++ + C
Sbjct: 133 DPGNCIGISR---FAETYGCRDLYLAATKYICQNFEAVCQTEEFFELTHADLDEIVSNDC 189
Query: 367 LNMLIQSLV 375
LN+ + V
Sbjct: 190 LNVATEETV 198
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,311,973
Number of Sequences: 37866
Number of extensions: 542804
Number of successful extensions: 1540
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1309
Number of HSP's gapped (non-prelim): 236
length of query: 378
length of database: 18,247,518
effective HSP length: 104
effective length of query: 274
effective length of database: 14,309,454
effective search space: 3920790396
effective search space used: 3920790396
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.