Guide to the Human Genome
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Name: BTBD9 Sequence: fasta or formatted (612aa) NCBI GI: 151108411
Description:

BTB (POZ) domain containing 9 isoform a

Referenced in:

Additional Interaction Domain Families

Other entries for this name:
alt mRNA [612aa] BTB (POZ) domain containing 9 isoform a
alt prot [544aa] BTB (POZ) domain containing 9 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         38           2
 C cysteine            2.8         17           2
 D aspartate           5.9         36           3
 E glutamate           6.7         41           2
 F phenylalanine       3.8         23           1
 G glycine             5.1         31           2
 H histidine           3.3         20           1
 I isoleucine          6.0         37           2
 K lysine              3.8         23           2
 L leucine            10.3         63           3
 M methionine          2.8         17           1
 N asparagine          4.2         26           1
 P proline             3.8         23           1
 Q glutamine           4.2         26           3
 R arginine            5.6         34           1
 S serine              9.3         57           2
 T threonine           5.2         32           2
 V valine              6.2         38           2
 W tryptophan          1.3          8           1
 Y tyrosine            3.6         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BTB (POZ) domain containing 9 isoform a 
BTBD9                 1.000   BTB (POZ) domain containing 9 isoform a 
BTBD9                 0.887   BTB (POZ) domain containing 9 isoform b 
BTBD6                 0.064   BTB domain protein BDPL 
BTBD1                 0.063   BTB (POZ) domain containing 1 isoform 2 
BTBD1                 0.063   BTB (POZ) domain containing 1 isoform 1 
BTBD3                 0.063   BTB/POZ domain containing protein 3 isoform a 
BTBD3                 0.063   BTB/POZ domain containing protein 3 isoform b 
LOC149478             0.061   hypothetical protein LOC149478 
BTBD2                 0.061   BTB (POZ) domain containing 2 
KLHL20                0.060   kelch-like 20 
KLHL3                 0.054   kelch-like 3 
KLHL6                 0.053   kelch-like 6 
KLHL25                0.051   BTB/POZ KELCH domain protein 
KLHL12                0.050   kelch-like 12 
KLHL24                0.050   DRE1 protein 
KLHL2                 0.049   kelch-like 2, Mayven isoform 2 
KLHL2                 0.049   kelch-like 2, Mayven isoform 1 
ENC1                  0.045   ectodermal-neural cortex (with BTB-like domain) [Homo...
KLHL17                0.045   kelch-like 17 
KLHL26                0.045   kelch-like 26 
IPP                   0.044   intracisternal A particle-promoted polypeptide isofor...
IPP                   0.044   intracisternal A particle-promoted polypeptide isof...
SPOPL                 0.044   speckle-type POZ protein-like 
KLHL21                0.044   kelch-like 21 
KBTBD8                0.044   T-cell activation kelch repeat protein 
SPOP                  0.044   speckle-type POZ protein 
SPOP                  0.044   speckle-type POZ protein 
SPOP                  0.044   speckle-type POZ protein 
SPOP                  0.044   speckle-type POZ protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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