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Search of human proteins with 224451142
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|224451142 stathmin 1 isoform b [Homo sapiens]
(174 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224451142 stathmin 1 isoform b [Homo sapiens] 346 5e-96
gi|44890052 stathmin 1 isoform a [Homo sapiens] 241 2e-64
gi|44890050 stathmin 1 isoform a [Homo sapiens] 241 2e-64
gi|5031851 stathmin 1 isoform a [Homo sapiens] 241 2e-64
gi|34850061 superiorcervical ganglia, neural specific 10 [Homo s... 174 3e-44
gi|21361947 stathmin-like 4 [Homo sapiens] 169 9e-43
gi|14670375 SCG10-like-protein [Homo sapiens] 163 6e-41
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 44 7e-05
gi|24307965 UBX domain containing 2 [Homo sapiens] 44 9e-05
gi|7661936 scaffold attachment factor B2 [Homo sapiens] 41 5e-04
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 41 6e-04
gi|154354979 myosin X [Homo sapiens] 40 0.001
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 40 0.001
gi|210032790 hypothetical protein LOC27146 [Homo sapiens] 40 0.001
gi|32698688 citron [Homo sapiens] 40 0.001
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 40 0.001
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 40 0.001
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 40 0.001
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 40 0.001
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 40 0.001
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 40 0.001
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 40 0.001
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 40 0.001
gi|134152708 arginine and glutamate rich 1 [Homo sapiens] 40 0.001
gi|48255883 troponin T type 2, cardiac isoform 4 [Homo sapiens] 39 0.002
gi|48255881 troponin T type 2, cardiac isoform 3 [Homo sapiens] 39 0.002
gi|48255879 troponin T type 2, cardiac isoform 2 [Homo sapiens] 39 0.002
gi|48255877 troponin T type 2, cardiac isoform 1 [Homo sapiens] 39 0.002
gi|9558729 golgi associated, gamma adaptin ear containing, ARF b... 39 0.002
gi|157785548 PAS domain containing 1 [Homo sapiens] 39 0.002
>gi|224451142 stathmin 1 isoform b [Homo sapiens]
Length = 174
Score = 346 bits (888), Expect = 5e-96
Identities = 174/174 (100%), Positives = 174/174 (100%)
Query: 1 MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEER 60
MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEER
Sbjct: 1 MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEER 60
Query: 61 RKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL 120
RKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL
Sbjct: 61 RKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL 120
Query: 121 ERLREKMYFWTHGPGAHPAQISAEQSCLHSVPALCPALGLQSALITWSDLSHHH 174
ERLREKMYFWTHGPGAHPAQISAEQSCLHSVPALCPALGLQSALITWSDLSHHH
Sbjct: 121 ERLREKMYFWTHGPGAHPAQISAEQSCLHSVPALCPALGLQSALITWSDLSHHH 174
>gi|44890052 stathmin 1 isoform a [Homo sapiens]
Length = 149
Score = 241 bits (616), Expect = 2e-64
Identities = 126/126 (100%), Positives = 126/126 (100%)
Query: 1 MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEER 60
MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEER
Sbjct: 1 MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEER 60
Query: 61 RKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL 120
RKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL
Sbjct: 61 RKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL 120
Query: 121 ERLREK 126
ERLREK
Sbjct: 121 ERLREK 126
>gi|44890050 stathmin 1 isoform a [Homo sapiens]
Length = 149
Score = 241 bits (616), Expect = 2e-64
Identities = 126/126 (100%), Positives = 126/126 (100%)
Query: 1 MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEER 60
MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEER
Sbjct: 1 MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEER 60
Query: 61 RKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL 120
RKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL
Sbjct: 61 RKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL 120
Query: 121 ERLREK 126
ERLREK
Sbjct: 121 ERLREK 126
>gi|5031851 stathmin 1 isoform a [Homo sapiens]
Length = 149
Score = 241 bits (616), Expect = 2e-64
Identities = 126/126 (100%), Positives = 126/126 (100%)
Query: 1 MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEER 60
MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEER
Sbjct: 1 MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEER 60
Query: 61 RKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL 120
RKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL
Sbjct: 61 RKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL 120
Query: 121 ERLREK 126
ERLREK
Sbjct: 121 ERLREK 126
>gi|34850061 superiorcervical ganglia, neural specific 10 [Homo
sapiens]
Length = 179
Score = 174 bits (441), Expect = 3e-44
Identities = 93/122 (76%), Positives = 104/122 (85%)
Query: 5 DIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSH 64
D++VK++ KRASGQAFELIL P S S L+ PKKKDLSLEEIQKKLEAAEERRKS
Sbjct: 39 DMEVKQINKRASGQAFELILKPPSPISEAPRTLASPKKKDLSLEEIQKKLEAAEERRKSQ 98
Query: 65 EAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLR 124
EA+VLKQLAEKREHE+EVLQKA+EENNNFSKMAEEKL KME KENREA +AA +ERL+
Sbjct: 99 EAQVLKQLAEKREHEREVLQKALEENNNFSKMAEEKLILKMEQIKENREANLAAIIERLQ 158
Query: 125 EK 126
EK
Sbjct: 159 EK 160
>gi|21361947 stathmin-like 4 [Homo sapiens]
Length = 216
Score = 169 bits (429), Expect = 9e-43
Identities = 88/123 (71%), Positives = 103/123 (83%)
Query: 4 SDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKS 63
SD++V EL K SGQ+FE+IL P S + VPEF S P+++D SLEEIQKKLEAAEERRK
Sbjct: 75 SDMEVIELNKCTSGQSFEVILKPPSFDGVPEFNASLPRRRDPSLEEIQKKLEAAEERRKY 134
Query: 64 HEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERL 123
EAE+LK LAEKREHE+EV+QKAIEENNNF KMA+EKL KME+NKENREA +AA LERL
Sbjct: 135 QEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERL 194
Query: 124 REK 126
+EK
Sbjct: 195 QEK 197
>gi|14670375 SCG10-like-protein [Homo sapiens]
Length = 180
Score = 163 bits (413), Expect = 6e-41
Identities = 87/124 (70%), Positives = 105/124 (84%), Gaps = 3/124 (2%)
Query: 5 DIQVKELEKRASGQAFELILSPRSKESVPEFPL--SPPKKKDLSLEEIQKKLEAAEERRK 62
D++VK+L+KRASGQ+FE+IL S S PE P+ SPPKKKD SLEE+QK+LEAAEERRK
Sbjct: 39 DMEVKQLDKRASGQSFEVILKSPSDLS-PESPMLSSPPKKKDTSLEELQKRLEAAEERRK 97
Query: 63 SHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLER 122
+ EA+VLKQLAE+REHE+EVL KA+EENNNFS+ AEEKL +KME +KE REA +AA ER
Sbjct: 98 TQEAQVLKQLAERREHEREVLHKALEENNNFSRQAEEKLNYKMELSKEIREAHLAALRER 157
Query: 123 LREK 126
LREK
Sbjct: 158 LREK 161
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 43.9 bits (102), Expect = 7e-05
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 37 LSPPKKKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKM 96
+ P +K+ LE +++K EA + RR+ E + ++L E + +E L+K ++ +M
Sbjct: 528 MDPKEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQM 587
Query: 97 AEEK----------LTHKMEANKENREAQMAAKLERLREKM 127
EEK + K E KE R A+ AK + +KM
Sbjct: 588 KEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKM 628
Score = 38.5 bits (88), Expect = 0.003
Identities = 22/93 (23%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 37 LSPPKKKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEK---REHEKEVLQKAIEENNNF 93
L+ ++++ +E +++ +ERR+ E +QLAE+ RE E+ ++ ++E
Sbjct: 680 LAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKA 739
Query: 94 SKMAEEKLTHKMEANKENREAQMAAKLERLREK 126
++ +E+L ++E K+ E Q A+ + E+
Sbjct: 740 LRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQ 772
Score = 37.7 bits (86), Expect = 0.005
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 7 QVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEA 66
Q+KE +K+ Q F I K KKK + KK+E E RRK E
Sbjct: 586 QMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAA-----KKMEEVEARRKQEEE 640
Query: 67 ----EVLKQLAEKREHEKEVLQKAIEENNNFSK------MAEEKLTHKMEANKENREAQM 116
L+Q E+R H++ + +K EE K +AE++ + E + +E +
Sbjct: 641 ARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERRE 700
Query: 117 AAKLERLREK 126
+ E+ R +
Sbjct: 701 QERREQERRE 710
Score = 37.0 bits (84), Expect = 0.009
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 9 KELEKRASGQAFELILSPRSKESVPEFP--LSPPKKKDLSLEEIQKKLEAAEER-RKSHE 65
++ +K+A+ + E + + R +E L +++ E +QKK E +ER RK+ E
Sbjct: 617 EKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAE 676
Query: 66 AEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKME-ANKENREAQMAAKLER 122
A K+LAE+RE E+ ++ +E + +E+ + + A +E R Q + ER
Sbjct: 677 A---KRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAER 731
Score = 33.5 bits (75), Expect = 0.095
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 41 KKKDLSLEEIQKKLEAA-------EERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNF 93
KKK+ E ++K EA +ERR+ E ++ E+RE E+ E+
Sbjct: 662 KKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERR------EQERQL 715
Query: 94 SKMAEEKLTHKMEANKENREAQMAAKLER 122
++ + +++A +E +E + A +L++
Sbjct: 716 AEQERRREQERLQAERELQEREKALRLQK 744
Score = 31.6 bits (70), Expect = 0.36
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 45 LSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHK 104
L EE +K+ A ER + + E KQ+ +K E +KA EE ++AEEK K
Sbjct: 568 LKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEE-----RLAEEKAKKK 622
Query: 105 MEANK-ENREAQMAAKLERLR 124
A K E EA+ + E R
Sbjct: 623 AAAKKMEEVEARRKQEEEARR 643
>gi|24307965 UBX domain containing 2 [Homo sapiens]
Length = 508
Score = 43.5 bits (101), Expect = 9e-05
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 39 PPKKKDLSLEEIQKKLEAA-EERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMA 97
P + ++ +E + KKLE EE+RK E +K+ E+R+ KE+L ++ +
Sbjct: 191 PAEDLNIRVERLTKKLEERREEKRKEEEQREIKKEIERRKTGKEML--------DYKRKQ 242
Query: 98 EEKLTHKMEANKENREAQMAAKLERLREKM 127
EE+LT +M + +A+ A ER+++++
Sbjct: 243 EEELTKRMLEERNREKAEDRAARERIKQQI 272
>gi|7661936 scaffold attachment factor B2 [Homo sapiens]
Length = 953
Score = 41.2 bits (95), Expect = 5e-04
Identities = 24/101 (23%), Positives = 50/101 (49%)
Query: 27 RSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKA 86
RS +S S K+ LS ++I+++ E +R++ E ++ E+ + E+E +A
Sbjct: 594 RSSKSQDRKSESKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEA 653
Query: 87 IEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLREKM 127
E +++ E+L + + + RE +LER R ++
Sbjct: 654 FHERKEKARLQRERLQLECQRQRLERERMERERLERERMRV 694
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 40.8 bits (94), Expect = 6e-04
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 41 KKKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEK 100
+K+ LE +++K EA + RR+ E + ++L E + +E L+K ++ +M EEK
Sbjct: 536 EKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEK 595
Query: 101 ----------LTHKMEANKENREAQMAAKLERLREKM 127
+ K E KE R A+ AK + +KM
Sbjct: 596 KKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKM 632
Score = 38.5 bits (88), Expect = 0.003
Identities = 22/93 (23%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 37 LSPPKKKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEK---REHEKEVLQKAIEENNNF 93
L+ ++++ +E +++ +ERR+ E +QLAE+ RE E+ ++ ++E
Sbjct: 684 LAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKA 743
Query: 94 SKMAEEKLTHKMEANKENREAQMAAKLERLREK 126
++ +E+L ++E K+ E Q A+ + E+
Sbjct: 744 LRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQ 776
Score = 37.7 bits (86), Expect = 0.005
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 7 QVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEA 66
Q+KE +K+ Q F I K KKK + KK+E E RRK E
Sbjct: 590 QMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAA-----KKMEEVEARRKQEEE 644
Query: 67 ----EVLKQLAEKREHEKEVLQKAIEENNNFSK------MAEEKLTHKMEANKENREAQM 116
L+Q E+R H++ + +K EE K +AE++ + E + +E +
Sbjct: 645 ARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERRE 704
Query: 117 AAKLERLREK 126
+ E+ R +
Sbjct: 705 QERREQERRE 714
Score = 37.0 bits (84), Expect = 0.009
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 9 KELEKRASGQAFELILSPRSKESVPEFP--LSPPKKKDLSLEEIQKKLEAAEER-RKSHE 65
++ +K+A+ + E + + R +E L +++ E +QKK E +ER RK+ E
Sbjct: 621 EKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAE 680
Query: 66 AEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKME-ANKENREAQMAAKLER 122
A K+LAE+RE E+ ++ +E + +E+ + + A +E R Q + ER
Sbjct: 681 A---KRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAER 735
Score = 33.5 bits (75), Expect = 0.095
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 41 KKKDLSLEEIQKKLEAA-------EERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNF 93
KKK+ E ++K EA +ERR+ E ++ E+RE E+ E+
Sbjct: 666 KKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERR------EQERQL 719
Query: 94 SKMAEEKLTHKMEANKENREAQMAAKLER 122
++ + +++A +E +E + A +L++
Sbjct: 720 AEQERRREQERLQAERELQEREKALRLQK 748
Score = 31.6 bits (70), Expect = 0.36
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 45 LSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHK 104
L EE +K+ A ER + + E KQ+ +K E +KA EE ++AEEK K
Sbjct: 572 LKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEE-----RLAEEKAKKK 626
Query: 105 MEANK-ENREAQMAAKLERLR 124
A K E EA+ + E R
Sbjct: 627 AAAKKMEEVEARRKQEEEARR 647
>gi|154354979 myosin X [Homo sapiens]
Length = 2058
Score = 40.0 bits (92), Expect = 0.001
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 41 KKKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAE--KREHEKEVLQKAIEENNNFSKMAE 98
KKK E+ +++ E E R+ EAE+ Q E +++ E E LQK+ E
Sbjct: 821 KKKQEEEEKKKREEEERERERERREAELRAQQEEETRKQQELEALQKS---------QKE 871
Query: 99 EKLTHKMEANKENREAQMAAKLER 122
+LT ++E KEN++ + +LE+
Sbjct: 872 AELTRELEKQKENKQVEEILRLEK 895
Score = 33.1 bits (74), Expect = 0.12
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 41 KKKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEK----REHEKEVLQKAIEENNNFSKM 96
++++ E + + + EE RK E E L++ ++ RE EK+ K +EE K
Sbjct: 837 RERERERREAELRAQQEEETRKQQELEALQKSQKEAELTRELEKQKENKQVEEILRLEKE 896
Query: 97 AEEKLTHKMEANKENREAQMA-AKLERLREK 126
E+ ++ KE +E + A L++L+E+
Sbjct: 897 IED-----LQRMKEQQELSLTEASLQKLQER 922
Score = 30.8 bits (68), Expect = 0.62
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKL 101
+K LE +QK + AE R E+ KQ K+ E L+K IE+ + E L
Sbjct: 857 RKQQELEALQKSQKEAELTR-----ELEKQKENKQVEEILRLEKEIEDLQRMKEQQELSL 911
Query: 102 THKMEANKENREAQMAAKLERLREK 126
T EA+ + + + +L RL E+
Sbjct: 912 T---EASLQKLQERRDQELRRLEEE 933
Score = 28.1 bits (61), Expect = 4.0
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 58 EERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKME----ANKENRE 113
+E +K E E EK++ E+E ++ E + +E+ T K + K +E
Sbjct: 818 QEEKKKQEEE------EKKKREEEERERERERREAELRAQQEEETRKQQELEALQKSQKE 871
Query: 114 AQMAAKLERLRE 125
A++ +LE+ +E
Sbjct: 872 AELTRELEKQKE 883
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 40.0 bits (92), Expect = 0.001
Identities = 39/124 (31%), Positives = 56/124 (45%), Gaps = 24/124 (19%)
Query: 26 PRSKESVPEFPLSPP-------------KKKDLSLEEIQKKL--------EAAEERRKSH 64
P+ S FP S P +K L L+ Q++L E E+ +
Sbjct: 303 PKQHSSTSPFPTSTPLRRITKKFVKGSTEKNKLRLQRDQERLGKQLKLRAEREEKEKLKE 362
Query: 65 EAEVLKQLAEKR-EHEKEVLQK-AIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLER 122
EA+ K+ A+K+ E EKE+ +K E+ K EK K E KE +EA + AKLE
Sbjct: 363 EAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRKERQEA-LEAKLEE 421
Query: 123 LREK 126
R+K
Sbjct: 422 KRKK 425
Score = 31.6 bits (70), Expect = 0.36
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 17/121 (14%)
Query: 9 KELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEAEV 68
K+L+ RA + E + KE KKK+ EE + K + E+R+ E E
Sbjct: 346 KQLKLRAEREEKEKL-----KEEAKRAKEEAKKKKE---EEKELKEKERREKREKDEKEK 397
Query: 69 LKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLREKMY 128
++ K E KE Q+A+E +K+ E++ K E K RE + K E+ +
Sbjct: 398 AEKQRLKEERRKE-RQEALE-----AKLEEKR---KKEEEKRLREEEKRIKAEKAEITRF 448
Query: 129 F 129
F
Sbjct: 449 F 449
Score = 31.2 bits (69), Expect = 0.47
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 7 QVKELEKRASGQAFELILSPRSKESVPEFPLSPPK-KKDLSLEEIQKKLEAAEERRKSHE 65
++KE KRA +A + KE E + K++ +E +K EERRK +
Sbjct: 359 KLKEEAKRAKEEA------KKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRKERQ 412
Query: 66 AEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANK 109
+ +L EKR+ E+E K + E K + ++T + K
Sbjct: 413 EALEAKLEEKRKKEEE---KRLREEEKRIKAEKAEITRFFQKPK 453
>gi|210032790 hypothetical protein LOC27146 [Homo sapiens]
Length = 1060
Score = 40.0 bits (92), Expect = 0.001
Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 26/139 (18%)
Query: 44 DLSLEEIQKKLEAAEERRKSHEAEV-------LKQLAEKREHEKEVLQKAIEENNNFS-- 94
DL E++Q++L+ ++ + +A++ L+ L + R E + ++ +++ ++ S
Sbjct: 635 DLEREKLQRELQETTQQNHAMKAQLEASHQRALRMLEKARHQELKATEERLKKESSHSLQ 694
Query: 95 ----------KMAEEKLTHKMEANKENREAQMAAKLERLREKMYFWTHGPGAHPAQISAE 144
+ EEK +++ +E +AQ A LE LR+++ A S
Sbjct: 695 IQHQTHRLELQALEEKARQELQEERERMQAQQALLLESLRQEL-------SEQQAACSGH 747
Query: 145 QSCLHSVPALCPALGLQSA 163
Q L ++ A ALG Q A
Sbjct: 748 QKDLEALQAELRALGRQQA 766
Score = 27.3 bits (59), Expect = 6.8
Identities = 19/78 (24%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 53 KLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEE--NNNFSKMAEEKLTHK--MEAN 108
+++ A E+ S+ E L+ L + + E+E LQ+ ++E N + A+ + +H+ +
Sbjct: 611 QMQQALEQCTSNYREDLQALKQLSDLEREKLQRELQETTQQNHAMKAQLEASHQRALRML 670
Query: 109 KENREAQMAAKLERLREK 126
++ R ++ A ERL+++
Sbjct: 671 EKARHQELKATEERLKKE 688
>gi|32698688 citron [Homo sapiens]
Length = 2027
Score = 39.7 bits (91), Expect = 0.001
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 2 ASSDIQVKELEKR------ASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLE 55
A ++++EL+++ AS +A EL+ + R + E L + ++ S E I+KKL
Sbjct: 632 AEQQLKIQELQEKLEKAVKASTEATELLQNIRQAKERAERELEKLQNREDSSEGIRKKLV 691
Query: 56 AAEERRKSH-EAEVLKQ-----LAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANK 109
AEE + H EA+V Q L +K +H +E ++ +N K +K T + +
Sbjct: 692 EAEELEEKHREAQVSAQHLEVHLKQKEQHYEEKIKVL---DNQIKKDLADKETLENMMQR 748
Query: 110 ENREAQMAAKL 120
EA K+
Sbjct: 749 HEEEAHEKGKI 759
Score = 29.6 bits (65), Expect = 1.4
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 41 KKKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEK 100
K++ L E + KL E++ E + L +K E E+E+ Q+ +EE + + +
Sbjct: 1108 KEQKLKAESLSDKLNDLEKKHAMLEMNA-RSLQQKLETERELKQRLLEEQAKLQQQMDLQ 1166
Query: 101 LTHKMEANKENREAQMAAKL 120
H + +EA A L
Sbjct: 1167 KNHIFRLTQGLQEALDRADL 1186
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 50 IQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANK 109
+Q + EAA+ RR+ EAE LKQ AE++ + Q A E+ K AE++ + +A +
Sbjct: 2098 VQAEREAAQSRRQVEEAERLKQSAEEQAQARAQAQAAAEK---LRKEAEQEAARRAQAEQ 2154
Query: 110 ENREAQMAAKLERLREKMY 128
+ AA E + K +
Sbjct: 2155 AALRQKQAADAEMEKHKKF 2173
Score = 36.2 bits (82), Expect = 0.015
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 12 EKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEAE--VL 69
EK A+G+A EL L S E L K+ LE +++ AAEE R+ EAE V
Sbjct: 1935 EKAAAGKA-ELELELGRIRSNAEDTLR--SKEQAELEAARQRQLAAEEERRRREAEERVQ 1991
Query: 70 KQLAEKRE---------HEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAK 119
K LA + E E E L+ +EE + AE++ +++ +E + ++ A+
Sbjct: 1992 KSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAE 2050
Score = 33.5 bits (75), Expect = 0.095
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 6 IQVKELEK-RASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRK-- 62
+Q++EL K +A +A L R K++ F EE +K + AEE +
Sbjct: 2235 VQMEELSKLKARIEAENRALILRDKDNTQRF----------LQEEAEKMKQVAEEAARLS 2284
Query: 63 --SHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL 120
+ EA L+QLAE E Q+A+ E KM +EK+ EA + EA++ +
Sbjct: 2285 VAAQEAARLRQLAE----EDLAQQRALAE-----KMLKEKMQAVQEATRLKAEAELLQQQ 2335
Query: 121 ERLREK 126
+ L ++
Sbjct: 2336 KELAQE 2341
Score = 31.6 bits (70), Expect = 0.36
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 46 SLEEIQKKLEAAEE--RRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTH 103
S+EE +++ AEE RRK E L+QL ++R ++E+L + + ++ EE+
Sbjct: 2551 SMEEARRRQHEAEEGVRRKQEE---LQQLEQQRRQQEELLAEENQRLREQLQLLEEQHRA 2607
Query: 104 KMEANKENREAQMAA 118
+ ++E +Q+AA
Sbjct: 2608 ALAHSEEVTASQVAA 2622
Score = 29.6 bits (65), Expect = 1.4
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 47 LEEIQKKLEAAEERRKSHEAEVLKQLAE--------------KREHEKEVLQKAIEENNN 92
L +Q++ AA ++R+ EAE+ K AE R ++ Q+ E
Sbjct: 1736 LARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGR 1795
Query: 93 FSKMAEEKLTHKMEANKENREAQMA 117
F ++AEE + A + R+ Q+A
Sbjct: 1796 FRELAEEAARLRALAEEAKRQRQLA 1820
Score = 29.3 bits (64), Expect = 1.8
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 63 SHEAEVLKQLAEKREHEKEVLQKAIEENNNFS---KMAEEKLTHKMEANKENREAQMAAK 119
SH + L Q E+ E+ Q+ I E + + E + H++ + A+ A+
Sbjct: 962 SHHYQQLLQSLEQGAQEESRCQRCISELKDIRLQLEACETRTVHRLRLPLDKEPARECAQ 1021
Query: 120 LERLREKMYFWTHGPGAHPAQISAEQSCLHSVPALCPA 157
++K G G A++SAE + ++P PA
Sbjct: 1022 RIAEQQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPA 1059
Score = 28.9 bits (63), Expect = 2.3
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKL 101
K +L LE + + A + R +AE+ + E+E ++ EE S AEE+
Sbjct: 1941 KAELELELGRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEA 2000
Query: 102 THKMEANKENREAQMAAKLE---RLREK 126
+ +A E E ++ AK+E RLRE+
Sbjct: 2001 ARQRKAALEEVE-RLKAKVEEARRLRER 2027
Score = 28.5 bits (62), Expect = 3.1
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 48 EEIQKKLEAAEERRKSHEAEVLKQLAEK---------REHEKEVLQKAIE-ENNNFSKMA 97
EE +++ + AEE AE + LAEK + E E+ K E EN ++A
Sbjct: 1811 EEAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLA 1870
Query: 98 EEKL--THKMEANKENREAQMAAKLERLRE 125
E++ ++E +A + +L +LR+
Sbjct: 1871 EDEAFQRRRLEEQAAQHKADIEERLAQLRK 1900
Score = 28.1 bits (61), Expect = 4.0
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 10 ELEKRASGQAFELILSPRSKESVPEFPLSPPKK----KDLSLEEIQKKLEAAEERRKSHE 65
EL R +A R+ +++ E L + + +E ++ A E ++S E
Sbjct: 1516 ELASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAE 1575
Query: 66 AEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLRE 125
AE+ + A E ++ + EE+ +++ EE R AQ A+ ER RE
Sbjct: 1576 AELQSKRASFAEKTAQLERSLQEEHVAVAQLREE----------AERRAQQQAEAERARE 1625
Query: 126 K 126
+
Sbjct: 1626 E 1626
Score = 28.1 bits (61), Expect = 4.0
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 47 LEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKME 106
L++++ + EAA RR + EAE + AE+ + ++ +EE + AEE+ + +
Sbjct: 2076 LDQLRGEAEAA--RRAAEEAEEARVQAEREAAQS---RRQVEEAERLKQSAEEQAQARAQ 2130
Query: 107 ANKENREAQMAAKLERLR 124
A + + A+ E R
Sbjct: 2131 AQAAAEKLRKEAEQEAAR 2148
Score = 28.1 bits (61), Expect = 4.0
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAI-----EENNNFSKM 96
++DL+ + + E+ + EA LK AE + +KE+ Q+ ++ ++
Sbjct: 2298 EEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQL 2357
Query: 97 AEEK--LTHKMEANKENREAQMAAKLERLR 124
AEE +EA ++ R+ +M+A+ ERL+
Sbjct: 2358 AEETQGFQRTLEAERQ-RQLEMSAEAERLK 2386
Score = 28.1 bits (61), Expect = 4.0
Identities = 16/71 (22%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 58 EERRKSHEAEVLKQLAEKREHEKEVLQKAIE----ENNNFSKMAEEKLTHKMEANKENRE 113
+ ++ H+AE L++ + E EKE LQ+ + ++ + +E+L + +A +++
Sbjct: 2437 QRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQALQQSFL 2496
Query: 114 AQMAAKLERLR 124
++ + L+R R
Sbjct: 2497 SEKDSLLQRER 2507
Score = 27.3 bits (59), Expect = 6.8
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 57 AEERRKSHEAEVL--KQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREA 114
+E R+ E E L +Q AE+RE EV + A+E+ ++AE K +A +E +E
Sbjct: 1338 SETLRRMEEEERLAEQQRAEERERLAEV-EAALEKQR---QLAEAHAQAKAQAEREAKEL 1393
Query: 115 QMAAKLERLREK 126
Q + E +R +
Sbjct: 1394 QQRMQEEVVRRE 1405
Score = 26.9 bits (58), Expect = 8.9
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 51 QKKLEAAE-ERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTH-KMEAN 108
QK+ AE E+ K + L+Q A+ E E L+ +EE ++ + +E+L K EA
Sbjct: 2159 QKQAADAEMEKHKKFAEQTLRQKAQV-EQELTTLRLQLEETDHQKNLLDEELQRLKAEAT 2217
Query: 109 KENRE-AQMAAKLERLREKM 127
+ R+ +Q+ +L +R +M
Sbjct: 2218 EAARQRSQVEEELFSVRVQM 2237
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 50 IQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANK 109
+Q + EAA+ RR+ EAE LKQ AE++ + Q A E+ K AE++ + +A +
Sbjct: 2102 VQAEREAAQSRRQVEEAERLKQSAEEQAQARAQAQAAAEK---LRKEAEQEAARRAQAEQ 2158
Query: 110 ENREAQMAAKLERLREKMY 128
+ AA E + K +
Sbjct: 2159 AALRQKQAADAEMEKHKKF 2177
Score = 36.2 bits (82), Expect = 0.015
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 12 EKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEAE--VL 69
EK A+G+A EL L S E L K+ LE +++ AAEE R+ EAE V
Sbjct: 1939 EKAAAGKA-ELELELGRIRSNAEDTLR--SKEQAELEAARQRQLAAEEERRRREAEERVQ 1995
Query: 70 KQLAEKRE---------HEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAK 119
K LA + E E E L+ +EE + AE++ +++ +E + ++ A+
Sbjct: 1996 KSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAE 2054
Score = 33.5 bits (75), Expect = 0.095
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 6 IQVKELEK-RASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRK-- 62
+Q++EL K +A +A L R K++ F EE +K + AEE +
Sbjct: 2239 VQMEELSKLKARIEAENRALILRDKDNTQRF----------LQEEAEKMKQVAEEAARLS 2288
Query: 63 --SHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL 120
+ EA L+QLAE E Q+A+ E KM +EK+ EA + EA++ +
Sbjct: 2289 VAAQEAARLRQLAE----EDLAQQRALAE-----KMLKEKMQAVQEATRLKAEAELLQQQ 2339
Query: 121 ERLREK 126
+ L ++
Sbjct: 2340 KELAQE 2345
Score = 31.6 bits (70), Expect = 0.36
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 46 SLEEIQKKLEAAEE--RRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTH 103
S+EE +++ AEE RRK E L+QL ++R ++E+L + + ++ EE+
Sbjct: 2555 SMEEARRRQHEAEEGVRRKQEE---LQQLEQQRRQQEELLAEENQRLREQLQLLEEQHRA 2611
Query: 104 KMEANKENREAQMAA 118
+ ++E +Q+AA
Sbjct: 2612 ALAHSEEVTASQVAA 2626
Score = 29.6 bits (65), Expect = 1.4
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 47 LEEIQKKLEAAEERRKSHEAEVLKQLAE--------------KREHEKEVLQKAIEENNN 92
L +Q++ AA ++R+ EAE+ K AE R ++ Q+ E
Sbjct: 1740 LARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGR 1799
Query: 93 FSKMAEEKLTHKMEANKENREAQMA 117
F ++AEE + A + R+ Q+A
Sbjct: 1800 FRELAEEAARLRALAEEAKRQRQLA 1824
Score = 29.3 bits (64), Expect = 1.8
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 63 SHEAEVLKQLAEKREHEKEVLQKAIEENNNFS---KMAEEKLTHKMEANKENREAQMAAK 119
SH + L Q E+ E+ Q+ I E + + E + H++ + A+ A+
Sbjct: 966 SHHYQQLLQSLEQGAQEESRCQRCISELKDIRLQLEACETRTVHRLRLPLDKEPARECAQ 1025
Query: 120 LERLREKMYFWTHGPGAHPAQISAEQSCLHSVPALCPA 157
++K G G A++SAE + ++P PA
Sbjct: 1026 RIAEQQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPA 1063
Score = 28.9 bits (63), Expect = 2.3
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKL 101
K +L LE + + A + R +AE+ + E+E ++ EE S AEE+
Sbjct: 1945 KAELELELGRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEA 2004
Query: 102 THKMEANKENREAQMAAKLE---RLREK 126
+ +A E E ++ AK+E RLRE+
Sbjct: 2005 ARQRKAALEEVE-RLKAKVEEARRLRER 2031
Score = 28.5 bits (62), Expect = 3.1
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 48 EEIQKKLEAAEERRKSHEAEVLKQLAEK---------REHEKEVLQKAIE-ENNNFSKMA 97
EE +++ + AEE AE + LAEK + E E+ K E EN ++A
Sbjct: 1815 EEAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLA 1874
Query: 98 EEKL--THKMEANKENREAQMAAKLERLRE 125
E++ ++E +A + +L +LR+
Sbjct: 1875 EDEAFQRRRLEEQAAQHKADIEERLAQLRK 1904
Score = 28.1 bits (61), Expect = 4.0
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 10 ELEKRASGQAFELILSPRSKESVPEFPLSPPKK----KDLSLEEIQKKLEAAEERRKSHE 65
EL R +A R+ +++ E L + + +E ++ A E ++S E
Sbjct: 1520 ELASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAE 1579
Query: 66 AEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLRE 125
AE+ + A E ++ + EE+ +++ EE R AQ A+ ER RE
Sbjct: 1580 AELQSKRASFAEKTAQLERSLQEEHVAVAQLREE----------AERRAQQQAEAERARE 1629
Query: 126 K 126
+
Sbjct: 1630 E 1630
Score = 28.1 bits (61), Expect = 4.0
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 47 LEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKME 106
L++++ + EAA RR + EAE + AE+ + ++ +EE + AEE+ + +
Sbjct: 2080 LDQLRGEAEAA--RRAAEEAEEARVQAEREAAQS---RRQVEEAERLKQSAEEQAQARAQ 2134
Query: 107 ANKENREAQMAAKLERLR 124
A + + A+ E R
Sbjct: 2135 AQAAAEKLRKEAEQEAAR 2152
Score = 28.1 bits (61), Expect = 4.0
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAI-----EENNNFSKM 96
++DL+ + + E+ + EA LK AE + +KE+ Q+ ++ ++
Sbjct: 2302 EEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQL 2361
Query: 97 AEEK--LTHKMEANKENREAQMAAKLERLR 124
AEE +EA ++ R+ +M+A+ ERL+
Sbjct: 2362 AEETQGFQRTLEAERQ-RQLEMSAEAERLK 2390
Score = 28.1 bits (61), Expect = 4.0
Identities = 16/71 (22%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 58 EERRKSHEAEVLKQLAEKREHEKEVLQKAIE----ENNNFSKMAEEKLTHKMEANKENRE 113
+ ++ H+AE L++ + E EKE LQ+ + ++ + +E+L + +A +++
Sbjct: 2441 QRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQALQQSFL 2500
Query: 114 AQMAAKLERLR 124
++ + L+R R
Sbjct: 2501 SEKDSLLQRER 2511
Score = 27.3 bits (59), Expect = 6.8
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 57 AEERRKSHEAEVL--KQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREA 114
+E R+ E E L +Q AE+RE EV + A+E+ ++AE K +A +E +E
Sbjct: 1342 SETLRRMEEEERLAEQQRAEERERLAEV-EAALEKQR---QLAEAHAQAKAQAEREAKEL 1397
Query: 115 QMAAKLERLREK 126
Q + E +R +
Sbjct: 1398 QQRMQEEVVRRE 1409
Score = 26.9 bits (58), Expect = 8.9
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 51 QKKLEAAE-ERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTH-KMEAN 108
QK+ AE E+ K + L+Q A+ E E L+ +EE ++ + +E+L K EA
Sbjct: 2163 QKQAADAEMEKHKKFAEQTLRQKAQV-EQELTTLRLQLEETDHQKNLLDEELQRLKAEAT 2221
Query: 109 KENRE-AQMAAKLERLREKM 127
+ R+ +Q+ +L +R +M
Sbjct: 2222 EAARQRSQVEEELFSVRVQM 2241
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 50 IQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANK 109
+Q + EAA+ RR+ EAE LKQ AE++ + Q A E+ K AE++ + +A +
Sbjct: 2098 VQAEREAAQSRRQVEEAERLKQSAEEQAQARAQAQAAAEK---LRKEAEQEAARRAQAEQ 2154
Query: 110 ENREAQMAAKLERLREKMY 128
+ AA E + K +
Sbjct: 2155 AALRQKQAADAEMEKHKKF 2173
Score = 36.2 bits (82), Expect = 0.015
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 12 EKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEAE--VL 69
EK A+G+A EL L S E L K+ LE +++ AAEE R+ EAE V
Sbjct: 1935 EKAAAGKA-ELELELGRIRSNAEDTLR--SKEQAELEAARQRQLAAEEERRRREAEERVQ 1991
Query: 70 KQLAEKRE---------HEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAK 119
K LA + E E E L+ +EE + AE++ +++ +E + ++ A+
Sbjct: 1992 KSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAE 2050
Score = 33.5 bits (75), Expect = 0.095
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 6 IQVKELEK-RASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRK-- 62
+Q++EL K +A +A L R K++ F EE +K + AEE +
Sbjct: 2235 VQMEELSKLKARIEAENRALILRDKDNTQRF----------LQEEAEKMKQVAEEAARLS 2284
Query: 63 --SHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL 120
+ EA L+QLAE E Q+A+ E KM +EK+ EA + EA++ +
Sbjct: 2285 VAAQEAARLRQLAE----EDLAQQRALAE-----KMLKEKMQAVQEATRLKAEAELLQQQ 2335
Query: 121 ERLREK 126
+ L ++
Sbjct: 2336 KELAQE 2341
Score = 31.6 bits (70), Expect = 0.36
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 46 SLEEIQKKLEAAEE--RRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTH 103
S+EE +++ AEE RRK E L+QL ++R ++E+L + + ++ EE+
Sbjct: 2551 SMEEARRRQHEAEEGVRRKQEE---LQQLEQQRRQQEELLAEENQRLREQLQLLEEQHRA 2607
Query: 104 KMEANKENREAQMAA 118
+ ++E +Q+AA
Sbjct: 2608 ALAHSEEVTASQVAA 2622
Score = 29.6 bits (65), Expect = 1.4
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 47 LEEIQKKLEAAEERRKSHEAEVLKQLAE--------------KREHEKEVLQKAIEENNN 92
L +Q++ AA ++R+ EAE+ K AE R ++ Q+ E
Sbjct: 1736 LARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGR 1795
Query: 93 FSKMAEEKLTHKMEANKENREAQMA 117
F ++AEE + A + R+ Q+A
Sbjct: 1796 FRELAEEAARLRALAEEAKRQRQLA 1820
Score = 29.3 bits (64), Expect = 1.8
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 63 SHEAEVLKQLAEKREHEKEVLQKAIEENNNFS---KMAEEKLTHKMEANKENREAQMAAK 119
SH + L Q E+ E+ Q+ I E + + E + H++ + A+ A+
Sbjct: 962 SHHYQQLLQSLEQGAQEESRCQRCISELKDIRLQLEACETRTVHRLRLPLDKEPARECAQ 1021
Query: 120 LERLREKMYFWTHGPGAHPAQISAEQSCLHSVPALCPA 157
++K G G A++SAE + ++P PA
Sbjct: 1022 RIAEQQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPA 1059
Score = 28.9 bits (63), Expect = 2.3
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKL 101
K +L LE + + A + R +AE+ + E+E ++ EE S AEE+
Sbjct: 1941 KAELELELGRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEA 2000
Query: 102 THKMEANKENREAQMAAKLE---RLREK 126
+ +A E E ++ AK+E RLRE+
Sbjct: 2001 ARQRKAALEEVE-RLKAKVEEARRLRER 2027
Score = 28.5 bits (62), Expect = 3.1
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 48 EEIQKKLEAAEERRKSHEAEVLKQLAEK---------REHEKEVLQKAIE-ENNNFSKMA 97
EE +++ + AEE AE + LAEK + E E+ K E EN ++A
Sbjct: 1811 EEAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLA 1870
Query: 98 EEKL--THKMEANKENREAQMAAKLERLRE 125
E++ ++E +A + +L +LR+
Sbjct: 1871 EDEAFQRRRLEEQAAQHKADIEERLAQLRK 1900
Score = 28.1 bits (61), Expect = 4.0
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 10 ELEKRASGQAFELILSPRSKESVPEFPLSPPKK----KDLSLEEIQKKLEAAEERRKSHE 65
EL R +A R+ +++ E L + + +E ++ A E ++S E
Sbjct: 1516 ELASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAE 1575
Query: 66 AEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLRE 125
AE+ + A E ++ + EE+ +++ EE R AQ A+ ER RE
Sbjct: 1576 AELQSKRASFAEKTAQLERSLQEEHVAVAQLREE----------AERRAQQQAEAERARE 1625
Query: 126 K 126
+
Sbjct: 1626 E 1626
Score = 28.1 bits (61), Expect = 4.0
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 47 LEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKME 106
L++++ + EAA RR + EAE + AE+ + ++ +EE + AEE+ + +
Sbjct: 2076 LDQLRGEAEAA--RRAAEEAEEARVQAEREAAQS---RRQVEEAERLKQSAEEQAQARAQ 2130
Query: 107 ANKENREAQMAAKLERLR 124
A + + A+ E R
Sbjct: 2131 AQAAAEKLRKEAEQEAAR 2148
Score = 28.1 bits (61), Expect = 4.0
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAI-----EENNNFSKM 96
++DL+ + + E+ + EA LK AE + +KE+ Q+ ++ ++
Sbjct: 2298 EEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQL 2357
Query: 97 AEEK--LTHKMEANKENREAQMAAKLERLR 124
AEE +EA ++ R+ +M+A+ ERL+
Sbjct: 2358 AEETQGFQRTLEAERQ-RQLEMSAEAERLK 2386
Score = 28.1 bits (61), Expect = 4.0
Identities = 16/71 (22%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 58 EERRKSHEAEVLKQLAEKREHEKEVLQKAIE----ENNNFSKMAEEKLTHKMEANKENRE 113
+ ++ H+AE L++ + E EKE LQ+ + ++ + +E+L + +A +++
Sbjct: 2437 QRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQALQQSFL 2496
Query: 114 AQMAAKLERLR 124
++ + L+R R
Sbjct: 2497 SEKDSLLQRER 2507
Score = 27.3 bits (59), Expect = 6.8
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 57 AEERRKSHEAEVL--KQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREA 114
+E R+ E E L +Q AE+RE EV + A+E+ ++AE K +A +E +E
Sbjct: 1338 SETLRRMEEEERLAEQQRAEERERLAEV-EAALEKQR---QLAEAHAQAKAQAEREAKEL 1393
Query: 115 QMAAKLERLREK 126
Q + E +R +
Sbjct: 1394 QQRMQEEVVRRE 1405
Score = 26.9 bits (58), Expect = 8.9
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 51 QKKLEAAE-ERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTH-KMEAN 108
QK+ AE E+ K + L+Q A+ E E L+ +EE ++ + +E+L K EA
Sbjct: 2159 QKQAADAEMEKHKKFAEQTLRQKAQV-EQELTTLRLQLEETDHQKNLLDEELQRLKAEAT 2217
Query: 109 KENRE-AQMAAKLERLREKM 127
+ R+ +Q+ +L +R +M
Sbjct: 2218 EAARQRSQVEEELFSVRVQM 2237
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 50 IQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANK 109
+Q + EAA+ RR+ EAE LKQ AE++ + Q A E+ K AE++ + +A +
Sbjct: 2066 VQAEREAAQSRRQVEEAERLKQSAEEQAQARAQAQAAAEK---LRKEAEQEAARRAQAEQ 2122
Query: 110 ENREAQMAAKLERLREKMY 128
+ AA E + K +
Sbjct: 2123 AALRQKQAADAEMEKHKKF 2141
Score = 36.2 bits (82), Expect = 0.015
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 12 EKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEAE--VL 69
EK A+G+A EL L S E L K+ LE +++ AAEE R+ EAE V
Sbjct: 1903 EKAAAGKA-ELELELGRIRSNAEDTLR--SKEQAELEAARQRQLAAEEERRRREAEERVQ 1959
Query: 70 KQLAEKRE---------HEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAK 119
K LA + E E E L+ +EE + AE++ +++ +E + ++ A+
Sbjct: 1960 KSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAE 2018
Score = 33.5 bits (75), Expect = 0.095
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 6 IQVKELEK-RASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRK-- 62
+Q++EL K +A +A L R K++ F EE +K + AEE +
Sbjct: 2203 VQMEELSKLKARIEAENRALILRDKDNTQRF----------LQEEAEKMKQVAEEAARLS 2252
Query: 63 --SHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL 120
+ EA L+QLAE E Q+A+ E KM +EK+ EA + EA++ +
Sbjct: 2253 VAAQEAARLRQLAE----EDLAQQRALAE-----KMLKEKMQAVQEATRLKAEAELLQQQ 2303
Query: 121 ERLREK 126
+ L ++
Sbjct: 2304 KELAQE 2309
Score = 31.6 bits (70), Expect = 0.36
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 46 SLEEIQKKLEAAEE--RRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTH 103
S+EE +++ AEE RRK E L+QL ++R ++E+L + + ++ EE+
Sbjct: 2519 SMEEARRRQHEAEEGVRRKQEE---LQQLEQQRRQQEELLAEENQRLREQLQLLEEQHRA 2575
Query: 104 KMEANKENREAQMAA 118
+ ++E +Q+AA
Sbjct: 2576 ALAHSEEVTASQVAA 2590
Score = 29.6 bits (65), Expect = 1.4
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 47 LEEIQKKLEAAEERRKSHEAEVLKQLAE--------------KREHEKEVLQKAIEENNN 92
L +Q++ AA ++R+ EAE+ K AE R ++ Q+ E
Sbjct: 1704 LARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGR 1763
Query: 93 FSKMAEEKLTHKMEANKENREAQMA 117
F ++AEE + A + R+ Q+A
Sbjct: 1764 FRELAEEAARLRALAEEAKRQRQLA 1788
Score = 29.3 bits (64), Expect = 1.8
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 63 SHEAEVLKQLAEKREHEKEVLQKAIEENNNFS---KMAEEKLTHKMEANKENREAQMAAK 119
SH + L Q E+ E+ Q+ I E + + E + H++ + A+ A+
Sbjct: 930 SHHYQQLLQSLEQGAQEESRCQRCISELKDIRLQLEACETRTVHRLRLPLDKEPARECAQ 989
Query: 120 LERLREKMYFWTHGPGAHPAQISAEQSCLHSVPALCPA 157
++K G G A++SAE + ++P PA
Sbjct: 990 RIAEQQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPA 1027
Score = 28.9 bits (63), Expect = 2.3
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKL 101
K +L LE + + A + R +AE+ + E+E ++ EE S AEE+
Sbjct: 1909 KAELELELGRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEA 1968
Query: 102 THKMEANKENREAQMAAKLE---RLREK 126
+ +A E E ++ AK+E RLRE+
Sbjct: 1969 ARQRKAALEEVE-RLKAKVEEARRLRER 1995
Score = 28.5 bits (62), Expect = 3.1
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 48 EEIQKKLEAAEERRKSHEAEVLKQLAEK---------REHEKEVLQKAIE-ENNNFSKMA 97
EE +++ + AEE AE + LAEK + E E+ K E EN ++A
Sbjct: 1779 EEAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLA 1838
Query: 98 EEKL--THKMEANKENREAQMAAKLERLRE 125
E++ ++E +A + +L +LR+
Sbjct: 1839 EDEAFQRRRLEEQAAQHKADIEERLAQLRK 1868
Score = 28.1 bits (61), Expect = 4.0
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 10 ELEKRASGQAFELILSPRSKESVPEFPLSPPKK----KDLSLEEIQKKLEAAEERRKSHE 65
EL R +A R+ +++ E L + + +E ++ A E ++S E
Sbjct: 1484 ELASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAE 1543
Query: 66 AEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLRE 125
AE+ + A E ++ + EE+ +++ EE R AQ A+ ER RE
Sbjct: 1544 AELQSKRASFAEKTAQLERSLQEEHVAVAQLREE----------AERRAQQQAEAERARE 1593
Query: 126 K 126
+
Sbjct: 1594 E 1594
Score = 28.1 bits (61), Expect = 4.0
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 47 LEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKME 106
L++++ + EAA RR + EAE + AE+ + ++ +EE + AEE+ + +
Sbjct: 2044 LDQLRGEAEAA--RRAAEEAEEARVQAEREAAQS---RRQVEEAERLKQSAEEQAQARAQ 2098
Query: 107 ANKENREAQMAAKLERLR 124
A + + A+ E R
Sbjct: 2099 AQAAAEKLRKEAEQEAAR 2116
Score = 28.1 bits (61), Expect = 4.0
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAI-----EENNNFSKM 96
++DL+ + + E+ + EA LK AE + +KE+ Q+ ++ ++
Sbjct: 2266 EEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQL 2325
Query: 97 AEEK--LTHKMEANKENREAQMAAKLERLR 124
AEE +EA ++ R+ +M+A+ ERL+
Sbjct: 2326 AEETQGFQRTLEAERQ-RQLEMSAEAERLK 2354
Score = 28.1 bits (61), Expect = 4.0
Identities = 16/71 (22%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 58 EERRKSHEAEVLKQLAEKREHEKEVLQKAIE----ENNNFSKMAEEKLTHKMEANKENRE 113
+ ++ H+AE L++ + E EKE LQ+ + ++ + +E+L + +A +++
Sbjct: 2405 QRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQALQQSFL 2464
Query: 114 AQMAAKLERLR 124
++ + L+R R
Sbjct: 2465 SEKDSLLQRER 2475
Score = 27.3 bits (59), Expect = 6.8
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 57 AEERRKSHEAEVL--KQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREA 114
+E R+ E E L +Q AE+RE EV + A+E+ ++AE K +A +E +E
Sbjct: 1306 SETLRRMEEEERLAEQQRAEERERLAEV-EAALEKQR---QLAEAHAQAKAQAEREAKEL 1361
Query: 115 QMAAKLERLREK 126
Q + E +R +
Sbjct: 1362 QQRMQEEVVRRE 1373
Score = 26.9 bits (58), Expect = 8.9
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 51 QKKLEAAE-ERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTH-KMEAN 108
QK+ AE E+ K + L+Q A+ E E L+ +EE ++ + +E+L K EA
Sbjct: 2127 QKQAADAEMEKHKKFAEQTLRQKAQV-EQELTTLRLQLEETDHQKNLLDEELQRLKAEAT 2185
Query: 109 KENRE-AQMAAKLERLREKM 127
+ R+ +Q+ +L +R +M
Sbjct: 2186 EAARQRSQVEEELFSVRVQM 2205
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 50 IQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANK 109
+Q + EAA+ RR+ EAE LKQ AE++ + Q A E+ K AE++ + +A +
Sbjct: 2235 VQAEREAAQSRRQVEEAERLKQSAEEQAQARAQAQAAAEK---LRKEAEQEAARRAQAEQ 2291
Query: 110 ENREAQMAAKLERLREKMY 128
+ AA E + K +
Sbjct: 2292 AALRQKQAADAEMEKHKKF 2310
Score = 36.2 bits (82), Expect = 0.015
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 12 EKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEAE--VL 69
EK A+G+A EL L S E L K+ LE +++ AAEE R+ EAE V
Sbjct: 2072 EKAAAGKA-ELELELGRIRSNAEDTLR--SKEQAELEAARQRQLAAEEERRRREAEERVQ 2128
Query: 70 KQLAEKRE---------HEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAK 119
K LA + E E E L+ +EE + AE++ +++ +E + ++ A+
Sbjct: 2129 KSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAE 2187
Score = 33.5 bits (75), Expect = 0.095
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 6 IQVKELEK-RASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRK-- 62
+Q++EL K +A +A L R K++ F EE +K + AEE +
Sbjct: 2372 VQMEELSKLKARIEAENRALILRDKDNTQRF----------LQEEAEKMKQVAEEAARLS 2421
Query: 63 --SHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL 120
+ EA L+QLAE E Q+A+ E KM +EK+ EA + EA++ +
Sbjct: 2422 VAAQEAARLRQLAE----EDLAQQRALAE-----KMLKEKMQAVQEATRLKAEAELLQQQ 2472
Query: 121 ERLREK 126
+ L ++
Sbjct: 2473 KELAQE 2478
Score = 31.6 bits (70), Expect = 0.36
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 46 SLEEIQKKLEAAEE--RRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTH 103
S+EE +++ AEE RRK E L+QL ++R ++E+L + + ++ EE+
Sbjct: 2688 SMEEARRRQHEAEEGVRRKQEE---LQQLEQQRRQQEELLAEENQRLREQLQLLEEQHRA 2744
Query: 104 KMEANKENREAQMAA 118
+ ++E +Q+AA
Sbjct: 2745 ALAHSEEVTASQVAA 2759
Score = 29.6 bits (65), Expect = 1.4
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 47 LEEIQKKLEAAEERRKSHEAEVLKQLAE--------------KREHEKEVLQKAIEENNN 92
L +Q++ AA ++R+ EAE+ K AE R ++ Q+ E
Sbjct: 1873 LARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGR 1932
Query: 93 FSKMAEEKLTHKMEANKENREAQMA 117
F ++AEE + A + R+ Q+A
Sbjct: 1933 FRELAEEAARLRALAEEAKRQRQLA 1957
Score = 29.3 bits (64), Expect = 1.8
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 63 SHEAEVLKQLAEKREHEKEVLQKAIEENNNFS---KMAEEKLTHKMEANKENREAQMAAK 119
SH + L Q E+ E+ Q+ I E + + E + H++ + A+ A+
Sbjct: 1099 SHHYQQLLQSLEQGAQEESRCQRCISELKDIRLQLEACETRTVHRLRLPLDKEPARECAQ 1158
Query: 120 LERLREKMYFWTHGPGAHPAQISAEQSCLHSVPALCPA 157
++K G G A++SAE + ++P PA
Sbjct: 1159 RIAEQQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPA 1196
Score = 28.9 bits (63), Expect = 2.3
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKL 101
K +L LE + + A + R +AE+ + E+E ++ EE S AEE+
Sbjct: 2078 KAELELELGRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEA 2137
Query: 102 THKMEANKENREAQMAAKLE---RLREK 126
+ +A E E ++ AK+E RLRE+
Sbjct: 2138 ARQRKAALEEVE-RLKAKVEEARRLRER 2164
Score = 28.5 bits (62), Expect = 3.1
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 48 EEIQKKLEAAEERRKSHEAEVLKQLAEK---------REHEKEVLQKAIE-ENNNFSKMA 97
EE +++ + AEE AE + LAEK + E E+ K E EN ++A
Sbjct: 1948 EEAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLA 2007
Query: 98 EEKL--THKMEANKENREAQMAAKLERLRE 125
E++ ++E +A + +L +LR+
Sbjct: 2008 EDEAFQRRRLEEQAAQHKADIEERLAQLRK 2037
Score = 28.1 bits (61), Expect = 4.0
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 10 ELEKRASGQAFELILSPRSKESVPEFPLSPPKK----KDLSLEEIQKKLEAAEERRKSHE 65
EL R +A R+ +++ E L + + +E ++ A E ++S E
Sbjct: 1653 ELASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAE 1712
Query: 66 AEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLRE 125
AE+ + A E ++ + EE+ +++ EE R AQ A+ ER RE
Sbjct: 1713 AELQSKRASFAEKTAQLERSLQEEHVAVAQLREE----------AERRAQQQAEAERARE 1762
Query: 126 K 126
+
Sbjct: 1763 E 1763
Score = 28.1 bits (61), Expect = 4.0
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 47 LEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKME 106
L++++ + EAA RR + EAE + AE+ + ++ +EE + AEE+ + +
Sbjct: 2213 LDQLRGEAEAA--RRAAEEAEEARVQAEREAAQS---RRQVEEAERLKQSAEEQAQARAQ 2267
Query: 107 ANKENREAQMAAKLERLR 124
A + + A+ E R
Sbjct: 2268 AQAAAEKLRKEAEQEAAR 2285
Score = 28.1 bits (61), Expect = 4.0
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAI-----EENNNFSKM 96
++DL+ + + E+ + EA LK AE + +KE+ Q+ ++ ++
Sbjct: 2435 EEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQL 2494
Query: 97 AEEK--LTHKMEANKENREAQMAAKLERLR 124
AEE +EA ++ R+ +M+A+ ERL+
Sbjct: 2495 AEETQGFQRTLEAERQ-RQLEMSAEAERLK 2523
Score = 28.1 bits (61), Expect = 4.0
Identities = 16/71 (22%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 58 EERRKSHEAEVLKQLAEKREHEKEVLQKAIE----ENNNFSKMAEEKLTHKMEANKENRE 113
+ ++ H+AE L++ + E EKE LQ+ + ++ + +E+L + +A +++
Sbjct: 2574 QRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQALQQSFL 2633
Query: 114 AQMAAKLERLR 124
++ + L+R R
Sbjct: 2634 SEKDSLLQRER 2644
Score = 27.3 bits (59), Expect = 6.8
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 57 AEERRKSHEAEVL--KQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREA 114
+E R+ E E L +Q AE+RE EV + A+E+ ++AE K +A +E +E
Sbjct: 1475 SETLRRMEEEERLAEQQRAEERERLAEV-EAALEKQR---QLAEAHAQAKAQAEREAKEL 1530
Query: 115 QMAAKLERLREK 126
Q + E +R +
Sbjct: 1531 QQRMQEEVVRRE 1542
Score = 26.9 bits (58), Expect = 8.9
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 51 QKKLEAAE-ERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTH-KMEAN 108
QK+ AE E+ K + L+Q A+ E E L+ +EE ++ + +E+L K EA
Sbjct: 2296 QKQAADAEMEKHKKFAEQTLRQKAQV-EQELTTLRLQLEETDHQKNLLDEELQRLKAEAT 2354
Query: 109 KENRE-AQMAAKLERLREKM 127
+ R+ +Q+ +L +R +M
Sbjct: 2355 EAARQRSQVEEELFSVRVQM 2374
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 50 IQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANK 109
+Q + EAA+ RR+ EAE LKQ AE++ + Q A E+ K AE++ + +A +
Sbjct: 2076 VQAEREAAQSRRQVEEAERLKQSAEEQAQARAQAQAAAEK---LRKEAEQEAARRAQAEQ 2132
Query: 110 ENREAQMAAKLERLREKMY 128
+ AA E + K +
Sbjct: 2133 AALRQKQAADAEMEKHKKF 2151
Score = 36.2 bits (82), Expect = 0.015
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 12 EKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEAE--VL 69
EK A+G+A EL L S E L K+ LE +++ AAEE R+ EAE V
Sbjct: 1913 EKAAAGKA-ELELELGRIRSNAEDTLR--SKEQAELEAARQRQLAAEEERRRREAEERVQ 1969
Query: 70 KQLAEKRE---------HEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAK 119
K LA + E E E L+ +EE + AE++ +++ +E + ++ A+
Sbjct: 1970 KSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAE 2028
Score = 33.5 bits (75), Expect = 0.095
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 6 IQVKELEK-RASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRK-- 62
+Q++EL K +A +A L R K++ F EE +K + AEE +
Sbjct: 2213 VQMEELSKLKARIEAENRALILRDKDNTQRF----------LQEEAEKMKQVAEEAARLS 2262
Query: 63 --SHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL 120
+ EA L+QLAE E Q+A+ E KM +EK+ EA + EA++ +
Sbjct: 2263 VAAQEAARLRQLAE----EDLAQQRALAE-----KMLKEKMQAVQEATRLKAEAELLQQQ 2313
Query: 121 ERLREK 126
+ L ++
Sbjct: 2314 KELAQE 2319
Score = 31.6 bits (70), Expect = 0.36
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 46 SLEEIQKKLEAAEE--RRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTH 103
S+EE +++ AEE RRK E L+QL ++R ++E+L + + ++ EE+
Sbjct: 2529 SMEEARRRQHEAEEGVRRKQEE---LQQLEQQRRQQEELLAEENQRLREQLQLLEEQHRA 2585
Query: 104 KMEANKENREAQMAA 118
+ ++E +Q+AA
Sbjct: 2586 ALAHSEEVTASQVAA 2600
Score = 29.6 bits (65), Expect = 1.4
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 47 LEEIQKKLEAAEERRKSHEAEVLKQLAE--------------KREHEKEVLQKAIEENNN 92
L +Q++ AA ++R+ EAE+ K AE R ++ Q+ E
Sbjct: 1714 LARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGR 1773
Query: 93 FSKMAEEKLTHKMEANKENREAQMA 117
F ++AEE + A + R+ Q+A
Sbjct: 1774 FRELAEEAARLRALAEEAKRQRQLA 1798
Score = 29.3 bits (64), Expect = 1.8
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 63 SHEAEVLKQLAEKREHEKEVLQKAIEENNNFS---KMAEEKLTHKMEANKENREAQMAAK 119
SH + L Q E+ E+ Q+ I E + + E + H++ + A+ A+
Sbjct: 940 SHHYQQLLQSLEQGAQEESRCQRCISELKDIRLQLEACETRTVHRLRLPLDKEPARECAQ 999
Query: 120 LERLREKMYFWTHGPGAHPAQISAEQSCLHSVPALCPA 157
++K G G A++SAE + ++P PA
Sbjct: 1000 RIAEQQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPA 1037
Score = 28.9 bits (63), Expect = 2.3
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKL 101
K +L LE + + A + R +AE+ + E+E ++ EE S AEE+
Sbjct: 1919 KAELELELGRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEA 1978
Query: 102 THKMEANKENREAQMAAKLE---RLREK 126
+ +A E E ++ AK+E RLRE+
Sbjct: 1979 ARQRKAALEEVE-RLKAKVEEARRLRER 2005
Score = 28.5 bits (62), Expect = 3.1
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 48 EEIQKKLEAAEERRKSHEAEVLKQLAEK---------REHEKEVLQKAIE-ENNNFSKMA 97
EE +++ + AEE AE + LAEK + E E+ K E EN ++A
Sbjct: 1789 EEAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLA 1848
Query: 98 EEKL--THKMEANKENREAQMAAKLERLRE 125
E++ ++E +A + +L +LR+
Sbjct: 1849 EDEAFQRRRLEEQAAQHKADIEERLAQLRK 1878
Score = 28.1 bits (61), Expect = 4.0
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 10 ELEKRASGQAFELILSPRSKESVPEFPLSPPKK----KDLSLEEIQKKLEAAEERRKSHE 65
EL R +A R+ +++ E L + + +E ++ A E ++S E
Sbjct: 1494 ELASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAE 1553
Query: 66 AEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLRE 125
AE+ + A E ++ + EE+ +++ EE R AQ A+ ER RE
Sbjct: 1554 AELQSKRASFAEKTAQLERSLQEEHVAVAQLREE----------AERRAQQQAEAERARE 1603
Query: 126 K 126
+
Sbjct: 1604 E 1604
Score = 28.1 bits (61), Expect = 4.0
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 47 LEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKME 106
L++++ + EAA RR + EAE + AE+ + ++ +EE + AEE+ + +
Sbjct: 2054 LDQLRGEAEAA--RRAAEEAEEARVQAEREAAQS---RRQVEEAERLKQSAEEQAQARAQ 2108
Query: 107 ANKENREAQMAAKLERLR 124
A + + A+ E R
Sbjct: 2109 AQAAAEKLRKEAEQEAAR 2126
Score = 28.1 bits (61), Expect = 4.0
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAI-----EENNNFSKM 96
++DL+ + + E+ + EA LK AE + +KE+ Q+ ++ ++
Sbjct: 2276 EEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQL 2335
Query: 97 AEEK--LTHKMEANKENREAQMAAKLERLR 124
AEE +EA ++ R+ +M+A+ ERL+
Sbjct: 2336 AEETQGFQRTLEAERQ-RQLEMSAEAERLK 2364
Score = 28.1 bits (61), Expect = 4.0
Identities = 16/71 (22%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 58 EERRKSHEAEVLKQLAEKREHEKEVLQKAIE----ENNNFSKMAEEKLTHKMEANKENRE 113
+ ++ H+AE L++ + E EKE LQ+ + ++ + +E+L + +A +++
Sbjct: 2415 QRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQALQQSFL 2474
Query: 114 AQMAAKLERLR 124
++ + L+R R
Sbjct: 2475 SEKDSLLQRER 2485
Score = 27.3 bits (59), Expect = 6.8
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 57 AEERRKSHEAEVL--KQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREA 114
+E R+ E E L +Q AE+RE EV + A+E+ ++AE K +A +E +E
Sbjct: 1316 SETLRRMEEEERLAEQQRAEERERLAEV-EAALEKQR---QLAEAHAQAKAQAEREAKEL 1371
Query: 115 QMAAKLERLREK 126
Q + E +R +
Sbjct: 1372 QQRMQEEVVRRE 1383
Score = 26.9 bits (58), Expect = 8.9
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 51 QKKLEAAE-ERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTH-KMEAN 108
QK+ AE E+ K + L+Q A+ E E L+ +EE ++ + +E+L K EA
Sbjct: 2137 QKQAADAEMEKHKKFAEQTLRQKAQV-EQELTTLRLQLEETDHQKNLLDEELQRLKAEAT 2195
Query: 109 KENRE-AQMAAKLERLREKM 127
+ R+ +Q+ +L +R +M
Sbjct: 2196 EAARQRSQVEEELFSVRVQM 2215
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 50 IQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANK 109
+Q + EAA+ RR+ EAE LKQ AE++ + Q A E+ K AE++ + +A +
Sbjct: 2084 VQAEREAAQSRRQVEEAERLKQSAEEQAQARAQAQAAAEK---LRKEAEQEAARRAQAEQ 2140
Query: 110 ENREAQMAAKLERLREKMY 128
+ AA E + K +
Sbjct: 2141 AALRQKQAADAEMEKHKKF 2159
Score = 36.2 bits (82), Expect = 0.015
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 12 EKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEAE--VL 69
EK A+G+A EL L S E L K+ LE +++ AAEE R+ EAE V
Sbjct: 1921 EKAAAGKA-ELELELGRIRSNAEDTLR--SKEQAELEAARQRQLAAEEERRRREAEERVQ 1977
Query: 70 KQLAEKRE---------HEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAK 119
K LA + E E E L+ +EE + AE++ +++ +E + ++ A+
Sbjct: 1978 KSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAE 2036
Score = 33.5 bits (75), Expect = 0.095
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 6 IQVKELEK-RASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRK-- 62
+Q++EL K +A +A L R K++ F EE +K + AEE +
Sbjct: 2221 VQMEELSKLKARIEAENRALILRDKDNTQRF----------LQEEAEKMKQVAEEAARLS 2270
Query: 63 --SHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL 120
+ EA L+QLAE E Q+A+ E KM +EK+ EA + EA++ +
Sbjct: 2271 VAAQEAARLRQLAE----EDLAQQRALAE-----KMLKEKMQAVQEATRLKAEAELLQQQ 2321
Query: 121 ERLREK 126
+ L ++
Sbjct: 2322 KELAQE 2327
Score = 31.6 bits (70), Expect = 0.36
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 46 SLEEIQKKLEAAEE--RRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTH 103
S+EE +++ AEE RRK E L+QL ++R ++E+L + + ++ EE+
Sbjct: 2537 SMEEARRRQHEAEEGVRRKQEE---LQQLEQQRRQQEELLAEENQRLREQLQLLEEQHRA 2593
Query: 104 KMEANKENREAQMAA 118
+ ++E +Q+AA
Sbjct: 2594 ALAHSEEVTASQVAA 2608
Score = 29.6 bits (65), Expect = 1.4
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 47 LEEIQKKLEAAEERRKSHEAEVLKQLAE--------------KREHEKEVLQKAIEENNN 92
L +Q++ AA ++R+ EAE+ K AE R ++ Q+ E
Sbjct: 1722 LARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGR 1781
Query: 93 FSKMAEEKLTHKMEANKENREAQMA 117
F ++AEE + A + R+ Q+A
Sbjct: 1782 FRELAEEAARLRALAEEAKRQRQLA 1806
Score = 29.3 bits (64), Expect = 1.8
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 63 SHEAEVLKQLAEKREHEKEVLQKAIEENNNFS---KMAEEKLTHKMEANKENREAQMAAK 119
SH + L Q E+ E+ Q+ I E + + E + H++ + A+ A+
Sbjct: 948 SHHYQQLLQSLEQGAQEESRCQRCISELKDIRLQLEACETRTVHRLRLPLDKEPARECAQ 1007
Query: 120 LERLREKMYFWTHGPGAHPAQISAEQSCLHSVPALCPA 157
++K G G A++SAE + ++P PA
Sbjct: 1008 RIAEQQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPA 1045
Score = 28.9 bits (63), Expect = 2.3
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKL 101
K +L LE + + A + R +AE+ + E+E ++ EE S AEE+
Sbjct: 1927 KAELELELGRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEA 1986
Query: 102 THKMEANKENREAQMAAKLE---RLREK 126
+ +A E E ++ AK+E RLRE+
Sbjct: 1987 ARQRKAALEEVE-RLKAKVEEARRLRER 2013
Score = 28.5 bits (62), Expect = 3.1
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 48 EEIQKKLEAAEERRKSHEAEVLKQLAEK---------REHEKEVLQKAIE-ENNNFSKMA 97
EE +++ + AEE AE + LAEK + E E+ K E EN ++A
Sbjct: 1797 EEAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLA 1856
Query: 98 EEKL--THKMEANKENREAQMAAKLERLRE 125
E++ ++E +A + +L +LR+
Sbjct: 1857 EDEAFQRRRLEEQAAQHKADIEERLAQLRK 1886
Score = 28.1 bits (61), Expect = 4.0
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 10 ELEKRASGQAFELILSPRSKESVPEFPLSPPKK----KDLSLEEIQKKLEAAEERRKSHE 65
EL R +A R+ +++ E L + + +E ++ A E ++S E
Sbjct: 1502 ELASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAE 1561
Query: 66 AEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLRE 125
AE+ + A E ++ + EE+ +++ EE R AQ A+ ER RE
Sbjct: 1562 AELQSKRASFAEKTAQLERSLQEEHVAVAQLREE----------AERRAQQQAEAERARE 1611
Query: 126 K 126
+
Sbjct: 1612 E 1612
Score = 28.1 bits (61), Expect = 4.0
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 47 LEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKME 106
L++++ + EAA RR + EAE + AE+ + ++ +EE + AEE+ + +
Sbjct: 2062 LDQLRGEAEAA--RRAAEEAEEARVQAEREAAQS---RRQVEEAERLKQSAEEQAQARAQ 2116
Query: 107 ANKENREAQMAAKLERLR 124
A + + A+ E R
Sbjct: 2117 AQAAAEKLRKEAEQEAAR 2134
Score = 28.1 bits (61), Expect = 4.0
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAI-----EENNNFSKM 96
++DL+ + + E+ + EA LK AE + +KE+ Q+ ++ ++
Sbjct: 2284 EEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQL 2343
Query: 97 AEEK--LTHKMEANKENREAQMAAKLERLR 124
AEE +EA ++ R+ +M+A+ ERL+
Sbjct: 2344 AEETQGFQRTLEAERQ-RQLEMSAEAERLK 2372
Score = 28.1 bits (61), Expect = 4.0
Identities = 16/71 (22%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 58 EERRKSHEAEVLKQLAEKREHEKEVLQKAIE----ENNNFSKMAEEKLTHKMEANKENRE 113
+ ++ H+AE L++ + E EKE LQ+ + ++ + +E+L + +A +++
Sbjct: 2423 QRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQALQQSFL 2482
Query: 114 AQMAAKLERLR 124
++ + L+R R
Sbjct: 2483 SEKDSLLQRER 2493
Score = 27.3 bits (59), Expect = 6.8
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 57 AEERRKSHEAEVL--KQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREA 114
+E R+ E E L +Q AE+RE EV + A+E+ ++AE K +A +E +E
Sbjct: 1324 SETLRRMEEEERLAEQQRAEERERLAEV-EAALEKQR---QLAEAHAQAKAQAEREAKEL 1379
Query: 115 QMAAKLERLREK 126
Q + E +R +
Sbjct: 1380 QQRMQEEVVRRE 1391
Score = 26.9 bits (58), Expect = 8.9
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 51 QKKLEAAE-ERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTH-KMEAN 108
QK+ AE E+ K + L+Q A+ E E L+ +EE ++ + +E+L K EA
Sbjct: 2145 QKQAADAEMEKHKKFAEQTLRQKAQV-EQELTTLRLQLEETDHQKNLLDEELQRLKAEAT 2203
Query: 109 KENRE-AQMAAKLERLREKM 127
+ R+ +Q+ +L +R +M
Sbjct: 2204 EAARQRSQVEEELFSVRVQM 2223
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 50 IQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANK 109
+Q + EAA+ RR+ EAE LKQ AE++ + Q A E+ K AE++ + +A +
Sbjct: 2125 VQAEREAAQSRRQVEEAERLKQSAEEQAQARAQAQAAAEK---LRKEAEQEAARRAQAEQ 2181
Query: 110 ENREAQMAAKLERLREKMY 128
+ AA E + K +
Sbjct: 2182 AALRQKQAADAEMEKHKKF 2200
Score = 36.2 bits (82), Expect = 0.015
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 12 EKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEAE--VL 69
EK A+G+A EL L S E L K+ LE +++ AAEE R+ EAE V
Sbjct: 1962 EKAAAGKA-ELELELGRIRSNAEDTLR--SKEQAELEAARQRQLAAEEERRRREAEERVQ 2018
Query: 70 KQLAEKRE---------HEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAK 119
K LA + E E E L+ +EE + AE++ +++ +E + ++ A+
Sbjct: 2019 KSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAE 2077
Score = 33.5 bits (75), Expect = 0.095
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 6 IQVKELEK-RASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRK-- 62
+Q++EL K +A +A L R K++ F EE +K + AEE +
Sbjct: 2262 VQMEELSKLKARIEAENRALILRDKDNTQRF----------LQEEAEKMKQVAEEAARLS 2311
Query: 63 --SHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKL 120
+ EA L+QLAE E Q+A+ E KM +EK+ EA + EA++ +
Sbjct: 2312 VAAQEAARLRQLAE----EDLAQQRALAE-----KMLKEKMQAVQEATRLKAEAELLQQQ 2362
Query: 121 ERLREK 126
+ L ++
Sbjct: 2363 KELAQE 2368
Score = 31.6 bits (70), Expect = 0.36
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 46 SLEEIQKKLEAAEE--RRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTH 103
S+EE +++ AEE RRK E L+QL ++R ++E+L + + ++ EE+
Sbjct: 2578 SMEEARRRQHEAEEGVRRKQEE---LQQLEQQRRQQEELLAEENQRLREQLQLLEEQHRA 2634
Query: 104 KMEANKENREAQMAA 118
+ ++E +Q+AA
Sbjct: 2635 ALAHSEEVTASQVAA 2649
Score = 29.6 bits (65), Expect = 1.4
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 47 LEEIQKKLEAAEERRKSHEAEVLKQLAE--------------KREHEKEVLQKAIEENNN 92
L +Q++ AA ++R+ EAE+ K AE R ++ Q+ E
Sbjct: 1763 LARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGR 1822
Query: 93 FSKMAEEKLTHKMEANKENREAQMA 117
F ++AEE + A + R+ Q+A
Sbjct: 1823 FRELAEEAARLRALAEEAKRQRQLA 1847
Score = 29.3 bits (64), Expect = 1.8
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 63 SHEAEVLKQLAEKREHEKEVLQKAIEENNNFS---KMAEEKLTHKMEANKENREAQMAAK 119
SH + L Q E+ E+ Q+ I E + + E + H++ + A+ A+
Sbjct: 989 SHHYQQLLQSLEQGAQEESRCQRCISELKDIRLQLEACETRTVHRLRLPLDKEPARECAQ 1048
Query: 120 LERLREKMYFWTHGPGAHPAQISAEQSCLHSVPALCPA 157
++K G G A++SAE + ++P PA
Sbjct: 1049 RIAEQQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPA 1086
Score = 28.9 bits (63), Expect = 2.3
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKL 101
K +L LE + + A + R +AE+ + E+E ++ EE S AEE+
Sbjct: 1968 KAELELELGRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEA 2027
Query: 102 THKMEANKENREAQMAAKLE---RLREK 126
+ +A E E ++ AK+E RLRE+
Sbjct: 2028 ARQRKAALEEVE-RLKAKVEEARRLRER 2054
Score = 28.5 bits (62), Expect = 3.1
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 48 EEIQKKLEAAEERRKSHEAEVLKQLAEK---------REHEKEVLQKAIE-ENNNFSKMA 97
EE +++ + AEE AE + LAEK + E E+ K E EN ++A
Sbjct: 1838 EEAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLA 1897
Query: 98 EEKL--THKMEANKENREAQMAAKLERLRE 125
E++ ++E +A + +L +LR+
Sbjct: 1898 EDEAFQRRRLEEQAAQHKADIEERLAQLRK 1927
Score = 28.1 bits (61), Expect = 4.0
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 10 ELEKRASGQAFELILSPRSKESVPEFPLSPPKK----KDLSLEEIQKKLEAAEERRKSHE 65
EL R +A R+ +++ E L + + +E ++ A E ++S E
Sbjct: 1543 ELASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAE 1602
Query: 66 AEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLRE 125
AE+ + A E ++ + EE+ +++ EE R AQ A+ ER RE
Sbjct: 1603 AELQSKRASFAEKTAQLERSLQEEHVAVAQLREE----------AERRAQQQAEAERARE 1652
Query: 126 K 126
+
Sbjct: 1653 E 1653
Score = 28.1 bits (61), Expect = 4.0
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 47 LEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKME 106
L++++ + EAA RR + EAE + AE+ + ++ +EE + AEE+ + +
Sbjct: 2103 LDQLRGEAEAA--RRAAEEAEEARVQAEREAAQS---RRQVEEAERLKQSAEEQAQARAQ 2157
Query: 107 ANKENREAQMAAKLERLR 124
A + + A+ E R
Sbjct: 2158 AQAAAEKLRKEAEQEAAR 2175
Score = 28.1 bits (61), Expect = 4.0
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAI-----EENNNFSKM 96
++DL+ + + E+ + EA LK AE + +KE+ Q+ ++ ++
Sbjct: 2325 EEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQL 2384
Query: 97 AEEK--LTHKMEANKENREAQMAAKLERLR 124
AEE +EA ++ R+ +M+A+ ERL+
Sbjct: 2385 AEETQGFQRTLEAERQ-RQLEMSAEAERLK 2413
Score = 28.1 bits (61), Expect = 4.0
Identities = 16/71 (22%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 58 EERRKSHEAEVLKQLAEKREHEKEVLQKAIE----ENNNFSKMAEEKLTHKMEANKENRE 113
+ ++ H+AE L++ + E EKE LQ+ + ++ + +E+L + +A +++
Sbjct: 2464 QRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQALQQSFL 2523
Query: 114 AQMAAKLERLR 124
++ + L+R R
Sbjct: 2524 SEKDSLLQRER 2534
Score = 27.3 bits (59), Expect = 6.8
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 57 AEERRKSHEAEVL--KQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREA 114
+E R+ E E L +Q AE+RE EV + A+E+ ++AE K +A +E +E
Sbjct: 1365 SETLRRMEEEERLAEQQRAEERERLAEV-EAALEKQR---QLAEAHAQAKAQAEREAKEL 1420
Query: 115 QMAAKLERLREK 126
Q + E +R +
Sbjct: 1421 QQRMQEEVVRRE 1432
Score = 26.9 bits (58), Expect = 8.9
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 51 QKKLEAAE-ERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTH-KMEAN 108
QK+ AE E+ K + L+Q A+ E E L+ +EE ++ + +E+L K EA
Sbjct: 2186 QKQAADAEMEKHKKFAEQTLRQKAQV-EQELTTLRLQLEETDHQKNLLDEELQRLKAEAT 2244
Query: 109 KENRE-AQMAAKLERLREKM 127
+ R+ +Q+ +L +R +M
Sbjct: 2245 EAARQRSQVEEELFSVRVQM 2264
>gi|134152708 arginine and glutamate rich 1 [Homo sapiens]
Length = 273
Score = 39.7 bits (91), Expect = 0.001
Identities = 37/138 (26%), Positives = 71/138 (51%), Gaps = 25/138 (18%)
Query: 5 DIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAA------- 57
+I+ K +E+ + + EL+ + R +E + K+KD E+ +++E A
Sbjct: 120 EIEEKLIEEETARRVEELV-AKRVEEELE-------KRKDEIEREVLRRVEEAKRIMEKQ 171
Query: 58 --EERRKSHEAEVLKQLAEKREH--EKEVLQKAIEENNN-----FSKMAEEKLTHKMEAN 108
EE + +AE+ Q A + E ++E L++ +EENN +K+AEE+L +E
Sbjct: 172 LLEELERQRQAELAAQKAREEEERAKREELERILEENNRKIAEAQAKLAEEQL-RIVEEQ 230
Query: 109 KENREAQMAAKLERLREK 126
++ E +M + ER R++
Sbjct: 231 RKIHEERMKLEQERQRQQ 248
Score = 36.6 bits (83), Expect = 0.011
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 12 EKRASGQAFELILSPRSKESVPEFPLSPPKKKDL---------SLEEIQKKLEAA----- 57
E R+ ++ +S R ++ E SPP + D+ SL+E QK+ E
Sbjct: 53 ESRSRSRSTNTAVSRRERDR--ERASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAEF 110
Query: 58 EERRKSHEAEVLKQLAEK---REHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREA 114
E +RK + E+ ++L E+ R E+ V ++ EE E ++ ++E K E
Sbjct: 111 ERQRKIRQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEK 170
Query: 115 QMAAKLERLRE 125
Q+ +LER R+
Sbjct: 171 QLLEELERQRQ 181
Score = 27.7 bits (60), Expect = 5.2
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 13/81 (16%)
Query: 7 QVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEA 66
+ +E E+RA + E IL ++ K + + +++L EE+RK HE
Sbjct: 188 KAREEEERAKREELERILEENNR-----------KIAEAQAKLAEEQLRIVEEQRKIHEE 236
Query: 67 EVLKQLAEKREHEKEVLQKAI 87
+ +L ++R+ +++ QK I
Sbjct: 237 RM--KLEQERQRQQKEEQKII 255
>gi|48255883 troponin T type 2, cardiac isoform 4 [Homo sapiens]
Length = 282
Score = 39.3 bits (90), Expect = 0.002
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 41 KKKDLSLEEIQKKLEAAEERRKSHEAEV--LKQLAEKREHEKEVLQKA--IEENNNFSKM 96
K+ + L E+Q +EA E RK E E+ LK E+R E+ Q+ E +++
Sbjct: 88 KRMEKDLNELQALIEAHFENRKKEEEELVSLKDRIERRRAERAEQQRIRNEREKERQNRL 147
Query: 97 AEEKLTHKMEANKENREAQMAAKLERLREKMYF 129
AEE+ + E N+ E + A K + L M+F
Sbjct: 148 AEERARREEEENRRKAEDE-ARKKKALSNMMHF 179
Score = 29.6 bits (65), Expect = 1.4
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 41 KKKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEK 100
K++ L E + + E E RRK+ + K+ H +QKA E + + E +
Sbjct: 141 KERQNRLAEERARREEEENRRKAEDEARKKKALSNMMHFGGYIQKAQTERKSGKRQTERE 200
Query: 101 LTHKMEANKENREAQMAAKLERLREK 126
K+ A + A ++LREK
Sbjct: 201 KKKKILAERRKVLAIDHLNEDQLREK 226
>gi|48255881 troponin T type 2, cardiac isoform 3 [Homo sapiens]
Length = 285
Score = 39.3 bits (90), Expect = 0.002
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 41 KKKDLSLEEIQKKLEAAEERRKSHEAEV--LKQLAEKREHEKEVLQKA--IEENNNFSKM 96
K+ + L E+Q +EA E RK E E+ LK E+R E+ Q+ E +++
Sbjct: 93 KRMEKDLNELQALIEAHFENRKKEEEELVSLKDRIERRRAERAEQQRIRNEREKERQNRL 152
Query: 97 AEEKLTHKMEANKENREAQMAAKLERLREKMYF 129
AEE+ + E N+ E + A K + L M+F
Sbjct: 153 AEERARREEEENRRKAEDE-ARKKKALSNMMHF 184
>gi|48255879 troponin T type 2, cardiac isoform 2 [Homo sapiens]
Length = 288
Score = 39.3 bits (90), Expect = 0.002
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 41 KKKDLSLEEIQKKLEAAEERRKSHEAEV--LKQLAEKREHEKEVLQKA--IEENNNFSKM 96
K+ + L E+Q +EA E RK E E+ LK E+R E+ Q+ E +++
Sbjct: 93 KRMEKDLNELQALIEAHFENRKKEEEELVSLKDRIERRRAERAEQQRIRNEREKERQNRL 152
Query: 97 AEEKLTHKMEANKENREAQMAAKLERLREKMYF 129
AEE+ + E N+ E + A K + L M+F
Sbjct: 153 AEERARREEEENRRKAEDE-ARKKKALSNMMHF 184
>gi|48255877 troponin T type 2, cardiac isoform 1 [Homo sapiens]
Length = 295
Score = 39.3 bits (90), Expect = 0.002
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 41 KKKDLSLEEIQKKLEAAEERRKSHEAEV--LKQLAEKREHEKEVLQKA--IEENNNFSKM 96
K+ + L E+Q +EA E RK E E+ LK E+R E+ Q+ E +++
Sbjct: 103 KRMEKDLNELQALIEAHFENRKKEEEELVSLKDRIERRRAERAEQQRIRNEREKERQNRL 162
Query: 97 AEEKLTHKMEANKENREAQMAAKLERLREKMYF 129
AEE+ + E N+ E + A K + L M+F
Sbjct: 163 AEERARREEEENRRKAEDE-ARKKKALSNMMHF 194
>gi|9558729 golgi associated, gamma adaptin ear containing, ARF
binding protein 1 isoform 1 [Homo sapiens]
Length = 639
Score = 39.3 bits (90), Expect = 0.002
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 14/108 (12%)
Query: 35 FPLSPPKKKDLSLEEIQKKLEAAEERRKSHEAE------VLKQLAEKREHEKEVLQK--- 85
FPL PP+ K++ E+ +K A + SH + ++K++ ++ + E + K
Sbjct: 157 FPLPPPRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKRMEKISKRVN 216
Query: 86 AIEE-NNNFSKMAEEKLTHKM----EANKENREAQMAAKLERLREKMY 128
AIEE NNN + E ++H + E+ ++ + ER+R ++
Sbjct: 217 AIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLMKELYQRCERMRPTLF 264
>gi|157785548 PAS domain containing 1 [Homo sapiens]
Length = 773
Score = 39.3 bits (90), Expect = 0.002
Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 1 MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEI-----QKKLE 55
+ SS+ K+ +K+ +GQ + P+ + LS K L+E Q++L
Sbjct: 424 LQSSEAVPKKQQKQHAGQVKRPLPHPKDVKCFCGLSLSNSLKNTGELQEPCVAFNQQQLV 483
Query: 56 AAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQ 115
E+ K + ++ +QL + RE K QK ++E K+ E+K+ K + ++ R+
Sbjct: 484 QQEQHLKEQQRQLREQLQQLREQRKVQKQKKMQEKK---KLQEQKMQEKKKLQEQRRQ-- 538
Query: 116 MAAKLERLREK 126
K ++L+E+
Sbjct: 539 ---KKKKLQER 546
Score = 36.6 bits (83), Expect = 0.011
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 41 KKKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEK 100
+KK L +++Q+K + E+RR+ K+L E+++ + ++LQK EE ++ E+
Sbjct: 517 EKKKLQEQKMQEKKKLQEQRRQKK-----KKLQERKKWQGQMLQKEPEEEQQKQQLQEQP 571
Query: 101 LTHKMEANKE 110
L H + E
Sbjct: 572 LKHNVIVGNE 581
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.123 0.341
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,803,258
Number of Sequences: 37866
Number of extensions: 300981
Number of successful extensions: 4978
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 606
Number of HSP's that attempted gapping in prelim test: 2660
Number of HSP's gapped (non-prelim): 2468
length of query: 174
length of database: 18,247,518
effective HSP length: 95
effective length of query: 79
effective length of database: 14,650,248
effective search space: 1157369592
effective search space used: 1157369592
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.