Guide to the Human Genome
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Name: ALKBH2 Sequence: fasta or formatted (261aa) NCBI GI: 224451107
Description:

AlkB homolog 2

Referenced in:

Prostate

Other entries for this name:
alt mRNA [261aa] AlkB homolog 2
alt mRNA [261aa] AlkB homolog 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         17           1
 C cysteine            1.1          3           1
 D aspartate           4.6         12           2
 E glutamate           6.9         18           2
 F phenylalanine       4.6         12           1
 G glycine             9.6         25           2
 H histidine           4.2         11           1
 I isoleucine          3.1          8           1
 K lysine              6.5         17           2
 L leucine             8.8         23           2
 M methionine          1.1          3           2
 N asparagine          2.3          6           1
 P proline             6.1         16           1
 Q glutamine           2.7          7           1
 R arginine            9.2         24           2
 S serine              6.1         16           1
 T threonine           5.4         14           1
 V valine              7.3         19           2
 W tryptophan          1.5          4           1
 Y tyrosine            2.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   AlkB homolog 2 
ALKBH2                1.000   AlkB homolog 2 
ALKBH2                1.000   AlkB homolog 2 
ALKBH3                0.165   AlkB homolog 3 
MLL2                  0.014   myeloid/lymphoid or mixed-lineage leukemia 2 
KLHL11                0.014   kelch-like 11 
TRIOBP                0.014   TRIO and F-actin binding protein isoform 6 
FTO                   0.012   fat mass and obesity associated 
KIAA1211              0.010   hypothetical protein LOC57482 
MSC                   0.010   musculin 
DVL2                  0.008   dishevelled 2 
LRRC7                 0.008   leucine rich repeat containing 7 
ALKBH4                0.008   alkB, alkylation repair homolog 4 
PHF20L1               0.008   PHD finger protein 20-like 1 isoform 1 
RECQL5                0.008   RecQ protein-like 5 isoform 1 
ZSCAN10               0.008   zinc finger and SCAN domain containing 10 
LOC100291630          0.006   PREDICTED: hypothetical protein XP_002345522 
LOC100292995          0.006   PREDICTED: hypothetical protein 
LOC100290148          0.006   PREDICTED: hypothetical protein XP_002346490 
DDX51                 0.006   DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 
GOLGA6B               0.006   golgi autoantigen, golgin subfamily a, 6B 
IGSF9B                0.006   immunoglobulin superfamily, member 9B 
GOLGA6D               0.006   golgi autoantigen, golgin subfamily a, 6D 
SIRT1                 0.006   sirtuin 1 isoform a 
NCKIPSD               0.006   NCK interacting protein with SH3 domain isoform 2 [H...
LOC100292370          0.006   PREDICTED: hypothetical protein 
GOLGA6C               0.006   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
SOX12                 0.006   SRY (sex determining region Y)-box 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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