Guide to the Human Genome
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Search of human proteins with 22325388

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|22325388 F-box protein FBG4 isoform 1 [Homo sapiens]
         (287 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22325388 F-box protein FBG4 isoform 1 [Homo sapiens]               602   e-172
gi|18643385 F-box protein FBG4 isoform 2 [Homo sapiens]               583   e-167
gi|30520327 F-box protein 27 [Homo sapiens]                           336   2e-92
gi|15812198 F-box only protein 2 [Homo sapiens]                       181   5e-46
gi|8922188 F-box only protein 6 [Homo sapiens]                        174   8e-44
gi|34878735 F-box protein 44 isoform 1 [Homo sapiens]                 163   2e-40
gi|62388868 F-box protein 44 isoform 1 [Homo sapiens]                 163   2e-40
gi|47825361 non-specific cytotoxic cell receptor protein 1 homol...    75   9e-14
gi|34878749 F-box protein 44 isoform 2 [Homo sapiens]                  67   2e-11
gi|34878753 F-box protein 44 isoform 2 [Homo sapiens]                  67   2e-11
gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens]      40   0.002
gi|124248558 F-box and WD-40 domain protein 9 [Homo sapiens]           38   0.012
gi|27312027 F-box only protein 16 [Homo sapiens]                       37   0.026
gi|83035136 F-box protein 31 [Homo sapiens]                            36   0.045
gi|122937219 F-box protein 41 [Homo sapiens]                           35   0.058
gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens]             35   0.099
gi|11024696 F-box only protein 24 isoform 2 [Homo sapiens]             35   0.099
gi|85540447 solute carrier family 26, member 11 [Homo sapiens]         32   0.49 
gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo sap...    32   0.84 
gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo sap...    32   0.84 
gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens]     32   0.84 
gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [H...    31   1.4  
gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [H...    31   1.4  
gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [H...    31   1.4  
gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [H...    31   1.4  
gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [H...    31   1.4  
gi|239756352 PREDICTED: hypothetical protein XP_002344902 [Homo ...    30   2.4  
gi|169160949 PREDICTED: hypothetical protein [Homo sapiens]            30   2.4  
gi|239750878 PREDICTED: hypothetical protein [Homo sapiens]            30   2.4  
gi|239750418 PREDICTED: hypothetical protein XP_002347389 [Homo ...    30   2.4  

>gi|22325388 F-box protein FBG4 isoform 1 [Homo sapiens]
          Length = 287

 Score =  602 bits (1552), Expect = e-172
 Identities = 287/287 (100%), Positives = 287/287 (100%)

Query: 1   MKQGLWLLEMGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRD 60
           MKQGLWLLEMGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRD
Sbjct: 1   MKQGLWLLEMGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRD 60

Query: 61  IVDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIF 120
           IVDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIF
Sbjct: 61  IVDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIF 120

Query: 121 NSCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQ 180
           NSCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQ
Sbjct: 121 NSCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQ 180

Query: 181 ELLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQ 240
           ELLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQ
Sbjct: 181 ELLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQ 240

Query: 241 VSHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 287
           VSHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS
Sbjct: 241 VSHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 287


>gi|18643385 F-box protein FBG4 isoform 2 [Homo sapiens]
          Length = 278

 Score =  583 bits (1503), Expect = e-167
 Identities = 278/278 (100%), Positives = 278/278 (100%)

Query: 10  MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL 69
           MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL
Sbjct: 1   MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL 60

Query: 70  LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR 129
           LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR
Sbjct: 61  LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR 120

Query: 130 GWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIE 189
           GWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIE
Sbjct: 121 GWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIE 180

Query: 190 ICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFG 249
           ICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFG
Sbjct: 181 ICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFG 240

Query: 250 KGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 287
           KGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS
Sbjct: 241 KGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 278


>gi|30520327 F-box protein 27 [Homo sapiens]
          Length = 283

 Score =  336 bits (861), Expect = 2e-92
 Identities = 164/286 (57%), Positives = 202/286 (70%), Gaps = 11/286 (3%)

Query: 10  MGARLSR---RRLPA---DPSLALDA--LPPELLVQVLSHVPPRSLVTRCRPVCRAWRDI 61
           MGA +SR    R+PA   +P  ALD   LPPELL+ VLSHVPPR+L+ RCR VCR WR +
Sbjct: 1   MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL 60

Query: 62  VDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFN 121
           VDG  +WLL LARD  A GRAL  +A+ C     +      C L R+C R P GRNLI N
Sbjct: 61  VDGQALWLLILARDHGATGRALLHLARSCQSPARNARP---CPLGRFCARRPIGRNLIRN 117

Query: 122 SCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQE 181
            CG++G R W V+HGG+GW +E+N T VPGAPSQTCFVTSF WC K+Q++DL  EG+W E
Sbjct: 118 PCGQEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPE 177

Query: 182 LLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQV 241
           LLDS +IEICV+DWWGAR + GC+Y+L V+LLD  +  + KFSA PDP+ QW    C  V
Sbjct: 178 LLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHV 237

Query: 242 SHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 287
           +HVF+N   G+R+VSFE  G+D   W GHYGA VT+SSV VR+RLS
Sbjct: 238 THVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS 283


>gi|15812198 F-box only protein 2 [Homo sapiens]
          Length = 296

 Score =  181 bits (460), Expect = 5e-46
 Identities = 100/267 (37%), Positives = 152/267 (56%), Gaps = 30/267 (11%)

Query: 27  LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAV 86
           LD LP  LL++VL+ +P   LV  CR VC  W+++VDG  +WLL+  ++       +   
Sbjct: 47  LDELPEPLLLRVLAALPAAELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGGV--- 103

Query: 87  AQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFRGW-EVEHGGNGWAIEKN 145
                   E+++ +      ++   +   RNL+ N CGE+   GW +VEHGG+GW +E+ 
Sbjct: 104 -------EEERDHWQ-----QFYFLSKRRRNLLRNPCGEEDLEGWCDVEHGGDGWRVEE- 150

Query: 146 LTPVPGAPS---------QTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIEICVADWW 196
              +PG            +  F +SFEWC K Q++DL  EG W+ELLD+ Q  I V DW+
Sbjct: 151 ---LPGDSGVEFTHDESVKKYFASSFEWCRKAQVIDLQAEGYWEELLDTTQPAIVVKDWY 207

Query: 197 GARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTE-RGCRQVSHVFTNFGKGIRYV 255
             R + GC+Y+L V+LL  +E  + +FS+    V Q ++  G  ++SH FT++G G+R+V
Sbjct: 208 SGRSDAGCLYELTVKLLSEHENVLAEFSSGQVAVPQDSDGGGWMEISHTFTDYGPGVRFV 267

Query: 256 SFEQYGRDVSSWVGHYGALVTHSSVRV 282
            FE  G+D   W G +GA VT+SSV V
Sbjct: 268 RFEHGGQDSVYWKGWFGARVTNSSVWV 294


>gi|8922188 F-box only protein 6 [Homo sapiens]
          Length = 293

 Score =  174 bits (441), Expect = 8e-44
 Identities = 91/269 (33%), Positives = 145/269 (53%), Gaps = 25/269 (9%)

Query: 26  ALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYA 85
           +++ LP  +L+++ +HVP R L+  CR VC  WRD++D  T+W                 
Sbjct: 12  SINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLW----------------- 54

Query: 86  VAQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAI 142
             ++CL      +++  P+     +       RNL+ N C E+    W+++ +GG+ W +
Sbjct: 55  -KRKCLREGFITKDWDQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKV 113

Query: 143 EK----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIEICVADWWGA 198
           E     + T  P    +  FVTS+E C K QLVDLV EG W+ELLD+ + +I V DW+ A
Sbjct: 114 ESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAA 173

Query: 199 RENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFGKGIRYVSFE 258
           R +CGC YQL+V+L       +  F   P  + QW      +VS+ F+++ +G+RY+ F+
Sbjct: 174 RADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYILFQ 233

Query: 259 QYGRDVSSWVGHYGALVTHSSVRVRIRLS 287
             GRD   W G YG  VT+SS+ V  +++
Sbjct: 234 HGGRDTQYWAGWYGPRVTNSSIVVSPKMT 262


>gi|34878735 F-box protein 44 isoform 1 [Homo sapiens]
          Length = 255

 Score =  163 bits (412), Expect = 2e-40
 Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 25/263 (9%)

Query: 27  LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAV 86
           ++ LP  +L+++ +HVP R L+  CR VC  WRD++D  T+W                  
Sbjct: 6   INELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLW------------------ 47

Query: 87  AQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAIE 143
            ++CL      E++  P+     +       RNL+ N C E+GF  W ++ +GG+ W +E
Sbjct: 48  KRKCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVE 107

Query: 144 K----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIEICVADWWGAR 199
                     P    +  FVTS+  C K Q+VDL  EG W+EL+D+ + +I V DW+ AR
Sbjct: 108 DLSRDQRKEFPNDQVKKYFVTSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEVKDWFAAR 167

Query: 200 ENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFGKGIRYVSFEQ 259
            +CG  YQL V+LL      +  F   P  + Q ++   R+VSH F+N+  G+RY+ F+ 
Sbjct: 168 PDCGSKYQLCVQLLSSAHAPLGTFQPDPATIQQKSDAKWREVSHTFSNYPPGVRYIWFQH 227

Query: 260 YGRDVSSWVGHYGALVTHSSVRV 282
            G D   W G YG  VT+SS+ +
Sbjct: 228 GGVDTHYWAGWYGPRVTNSSITI 250


>gi|62388868 F-box protein 44 isoform 1 [Homo sapiens]
          Length = 255

 Score =  163 bits (412), Expect = 2e-40
 Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 25/263 (9%)

Query: 27  LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAV 86
           ++ LP  +L+++ +HVP R L+  CR VC  WRD++D  T+W                  
Sbjct: 6   INELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLW------------------ 47

Query: 87  AQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAIE 143
            ++CL      E++  P+     +       RNL+ N C E+GF  W ++ +GG+ W +E
Sbjct: 48  KRKCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVE 107

Query: 144 K----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIEICVADWWGAR 199
                     P    +  FVTS+  C K Q+VDL  EG W+EL+D+ + +I V DW+ AR
Sbjct: 108 DLSRDQRKEFPNDQVKKYFVTSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEVKDWFAAR 167

Query: 200 ENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFGKGIRYVSFEQ 259
            +CG  YQL V+LL      +  F   P  + Q ++   R+VSH F+N+  G+RY+ F+ 
Sbjct: 168 PDCGSKYQLCVQLLSSAHAPLGTFQPDPATIQQKSDAKWREVSHTFSNYPPGVRYIWFQH 227

Query: 260 YGRDVSSWVGHYGALVTHSSVRV 282
            G D   W G YG  VT+SS+ +
Sbjct: 228 GGVDTHYWAGWYGPRVTNSSITI 250


>gi|47825361 non-specific cytotoxic cell receptor protein 1 homolog
           [Homo sapiens]
          Length = 275

 Score = 74.7 bits (182), Expect = 9e-14
 Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 11/128 (8%)

Query: 164 WCSKRQLVDLVMEGVWQELLDSAQIEICVADWWGARENCGCVYQLRVRLLD------VYE 217
           W  K+Q VDL+ EG+W+ELLD  Q  I V DW+       CVY+L V LL       + +
Sbjct: 152 WTVKQQCVDLLAEGLWEELLDDEQPAITVMDWFEDSRLDACVYELHVWLLAADRRTVIAQ 211

Query: 218 KEVVKFSASPDPVLQWTERGCRQVSHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTH 277
             V   ++   P  +W      QVSHVF ++G G+R++ F    ++     G     VT 
Sbjct: 212 HHVAPRTSGRGPPGRWV-----QVSHVFRHYGPGVRFIHFLHKAKNRMEPGGLRRTRVTD 266

Query: 278 SSVRVRIR 285
           SSV V++R
Sbjct: 267 SSVSVQLR 274


>gi|34878749 F-box protein 44 isoform 2 [Homo sapiens]
          Length = 224

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 21/120 (17%)

Query: 27  LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAV 86
           ++ LP  +L+++ +HVP R L+  CR VC  WRD++D  T+W                  
Sbjct: 6   INELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLW------------------ 47

Query: 87  AQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAIE 143
            ++CL      E++  P+     +       RNL+ N C E+GF  W ++ +GG+ W +E
Sbjct: 48  KRKCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVE 107


>gi|34878753 F-box protein 44 isoform 2 [Homo sapiens]
          Length = 224

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 21/120 (17%)

Query: 27  LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAV 86
           ++ LP  +L+++ +HVP R L+  CR VC  WRD++D  T+W                  
Sbjct: 6   INELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLW------------------ 47

Query: 87  AQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAIE 143
            ++CL      E++  P+     +       RNL+ N C E+GF  W ++ +GG+ W +E
Sbjct: 48  KRKCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVE 107


>gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens]
          Length = 491

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 13  RLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW-LLQ 71
           RL+ R  P     ++D LP   +VQ+ S +P   L  RC  VCR W ++   P +W  ++
Sbjct: 102 RLASR--PQKEQASIDRLPDHSMVQIFSFLPTNQLC-RCARVCRRWYNLAWDPRLWRTIR 158

Query: 72  LARDRSAEGRALYAVAQR 89
           L  +     RAL  + +R
Sbjct: 159 LTGETINVDRALKVLTRR 176


>gi|124248558 F-box and WD-40 domain protein 9 [Homo sapiens]
          Length = 458

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 20/57 (35%), Positives = 31/57 (54%)

Query: 18  RLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLAR 74
           R+ A     L +LPPELL+++ S++  R ++     VC A RD+V     W L+  R
Sbjct: 70  RVSAVSEPGLLSLPPELLLEICSYLDARLVLHVLSRVCHALRDLVSDHVTWRLRALR 126


>gi|27312027 F-box only protein 16 [Homo sapiens]
          Length = 292

 Score = 36.6 bits (83), Expect = 0.026
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 13  RLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQL 72
           R  + ++PA+       LP  L + + S + PRSL  RC  VC  W+++ +   +W+L+ 
Sbjct: 75  RKLQEKIPAEALDFTTKLPRVLSLYIFSFLDPRSLC-RCAQVCWHWKNLAELDQLWMLKC 133

Query: 73  AR 74
            R
Sbjct: 134 LR 135


>gi|83035136 F-box protein 31 [Homo sapiens]
          Length = 539

 Score = 35.8 bits (81), Expect = 0.045
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 10  MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 68
           +G  L     P  P  +L  LPPELLV++ + +P   L +  + VC  +R I+   T+W
Sbjct: 50  VGGGLCAGPSPPPPRCSLLELPPELLVEIFASLPGTDLPSLAQ-VCTKFRRILHTDTIW 107


>gi|122937219 F-box protein 41 [Homo sapiens]
          Length = 936

 Score = 35.4 bits (80), Expect = 0.058
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 7/88 (7%)

Query: 9   EMGARLSRRRLPADPSLALDALPPELLVQ------VLSHVPPRSLVTRCRPVCRAWRDIV 62
           E G+   RR     PS + + + PE+L        + +++  R+L+     VCR WR + 
Sbjct: 586 EGGSGRGRRAERVSPSRSNEVISPEILKMRAALFCIFTYLDTRTLL-HAAEVCRDWRFVA 644

Query: 63  DGPTVWLLQLARDRSAEGRALYAVAQRC 90
             P VW   L  +     + L  +AQ C
Sbjct: 645 RHPAVWTRVLLENARVCSKFLAMLAQWC 672


>gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens]
          Length = 580

 Score = 34.7 bits (78), Expect = 0.099
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 25 LALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 68
          +++   PPEL+  ++S +P R LV   +  CR + ++ DG  VW
Sbjct: 37 ISIQLFPPELVEHIISFLPVRDLVALGQ-TCRYFHEVCDGEGVW 79


>gi|11024696 F-box only protein 24 isoform 2 [Homo sapiens]
          Length = 318

 Score = 34.7 bits (78), Expect = 0.099
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 25 LALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 68
          +++   PPEL+  ++S +P R LV   +  CR + ++ DG  VW
Sbjct: 37 ISIQLFPPELVEHIISFLPVRDLVALGQ-TCRYFHEVCDGEGVW 79


>gi|85540447 solute carrier family 26, member 11 [Homo sapiens]
          Length = 606

 Score = 32.3 bits (72), Expect = 0.49
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)

Query: 26  ALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRAL 83
           A++AL  E+L + L   PPR LV  C  VC     +V G    L +L +D   +G AL
Sbjct: 493 AMEALREEILSRALEVSPPRCLVLECTHVCSIDYTVVLG----LGELLQDFQKQGVAL 546


>gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo
           sapiens]
          Length = 1094

 Score = 31.6 bits (70), Expect = 0.84
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 19  LPADPSLA-LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGP 65
           LP   +L+ + +LP E+L  V + +P   L      VC  WR+I+  P
Sbjct: 254 LPCQEALSHICSLPSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDP 301


>gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo
           sapiens]
          Length = 1043

 Score = 31.6 bits (70), Expect = 0.84
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 19  LPADPSLA-LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGP 65
           LP   +L+ + +LP E+L  V + +P   L      VC  WR+I+  P
Sbjct: 203 LPCQEALSHICSLPSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDP 250


>gi|8923179 F-box and leucine-rich repeat protein 12 [Homo
          sapiens]
          Length = 326

 Score = 31.6 bits (70), Expect = 0.84
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 30 LPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 68
          LP  +L+++ S++P R  + R   VC  W+ +VD   +W
Sbjct: 7  LPDSVLLEIFSYLPVRDRI-RISRVCHRWKRLVDDRWLW 44


>gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [Homo
           sapiens]
          Length = 589

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 27  LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 68
           +  LP EL + VLS + P+ L+ +    CR WR + +   +W
Sbjct: 163 ISLLPKELALYVLSFLEPKDLL-QAAQTCRYWRILAEDNLLW 203


>gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [Homo
           sapiens]
          Length = 707

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 27  LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 68
           +  LP EL + VLS + P+ L+ +    CR WR + +   +W
Sbjct: 281 ISLLPKELALYVLSFLEPKDLL-QAAQTCRYWRILAEDNLLW 321


>gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [Homo
           sapiens]
          Length = 627

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 27  LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 68
           +  LP EL + VLS + P+ L+ +    CR WR + +   +W
Sbjct: 201 ISLLPKELALYVLSFLEPKDLL-QAAQTCRYWRILAEDNLLW 241


>gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [Homo
           sapiens]
          Length = 533

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)

Query: 28  DALPPELLVQVLSHVP----PRSLVTRCRPVCRAWRDIVDGPTVW 68
           D +P E+LVQ+   +     P   + R   VCR W++    P +W
Sbjct: 113 DRIPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALW 157


>gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [Homo
           sapiens]
          Length = 539

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)

Query: 28  DALPPELLVQVLSHVP----PRSLVTRCRPVCRAWRDIVDGPTVW 68
           D +P E+LVQ+   +     P   + R   VCR W++    P +W
Sbjct: 113 DRIPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALW 157


>gi|239756352 PREDICTED: hypothetical protein XP_002344902 [Homo
           sapiens]
          Length = 211

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 25  LALDALPPELLVQVLSHVPPRSLVTRCRPVCR-AWRDIVDGPTVWLL 70
           ++  ++PP  + QV    PP  L + C P+C      +  GP++WLL
Sbjct: 156 ISSSSVPPSPISQVSPASPPPPLPSSCLPMCSLVPSPLGTGPSLWLL 202


>gi|169160949 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 163

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 34/112 (30%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 9   EMGARLSRRRLPADP------------SLALDALPPELLVQVLSHVPPRSLVTRCRPVCR 56
           E+GAR    RL A+P            SL   A   ELL Q      PR      R V  
Sbjct: 14  EIGARFYSSRLQAEPNTLRGLTFQINSSLQWFAKANELLFQGREESNPRKPGPEDREVWW 73

Query: 57  AWRDIVDGPTV-WLLQLARDR----SAEGRALYAVAQRCLPSNEDKEEFPLC 103
               +  G    W L  AR      S  G+ALY +AQ CL  +   +   +C
Sbjct: 74  GLAVLWTGQEAPWALDTARSSANCISGPGQALYLIAQWCLSPHLGNKANRIC 125


>gi|239750878 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 211

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 25  LALDALPPELLVQVLSHVPPRSLVTRCRPVCR-AWRDIVDGPTVWLL 70
           ++  ++PP  + QV    PP  L + C P+C      +  GP++WLL
Sbjct: 156 ISSSSVPPSPISQVSPASPPPPLPSSCLPMCSLVPSPLGTGPSLWLL 202


>gi|239750418 PREDICTED: hypothetical protein XP_002347389 [Homo
           sapiens]
          Length = 220

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 10/61 (16%)

Query: 7   LLEMGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPT 66
           L+E+G  +  R L  DP  ALD LP  +LVQV+    PR      RP C     IV  P 
Sbjct: 111 LVEVGPVI--RALDVDPPHALDPLPLLVLVQVVG--APR------RPACGLQERIVRSPA 160

Query: 67  V 67
           +
Sbjct: 161 I 161


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.138    0.459 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,527,233
Number of Sequences: 37866
Number of extensions: 586399
Number of successful extensions: 1671
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1607
Number of HSP's gapped (non-prelim): 75
length of query: 287
length of database: 18,247,518
effective HSP length: 101
effective length of query: 186
effective length of database: 14,423,052
effective search space: 2682687672
effective search space used: 2682687672
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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