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Search of human proteins with 22325388
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22325388 F-box protein FBG4 isoform 1 [Homo sapiens]
(287 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22325388 F-box protein FBG4 isoform 1 [Homo sapiens] 602 e-172
gi|18643385 F-box protein FBG4 isoform 2 [Homo sapiens] 583 e-167
gi|30520327 F-box protein 27 [Homo sapiens] 336 2e-92
gi|15812198 F-box only protein 2 [Homo sapiens] 181 5e-46
gi|8922188 F-box only protein 6 [Homo sapiens] 174 8e-44
gi|34878735 F-box protein 44 isoform 1 [Homo sapiens] 163 2e-40
gi|62388868 F-box protein 44 isoform 1 [Homo sapiens] 163 2e-40
gi|47825361 non-specific cytotoxic cell receptor protein 1 homol... 75 9e-14
gi|34878749 F-box protein 44 isoform 2 [Homo sapiens] 67 2e-11
gi|34878753 F-box protein 44 isoform 2 [Homo sapiens] 67 2e-11
gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens] 40 0.002
gi|124248558 F-box and WD-40 domain protein 9 [Homo sapiens] 38 0.012
gi|27312027 F-box only protein 16 [Homo sapiens] 37 0.026
gi|83035136 F-box protein 31 [Homo sapiens] 36 0.045
gi|122937219 F-box protein 41 [Homo sapiens] 35 0.058
gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens] 35 0.099
gi|11024696 F-box only protein 24 isoform 2 [Homo sapiens] 35 0.099
gi|85540447 solute carrier family 26, member 11 [Homo sapiens] 32 0.49
gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo sap... 32 0.84
gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo sap... 32 0.84
gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens] 32 0.84
gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [H... 31 1.4
gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [H... 31 1.4
gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [H... 31 1.4
gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [H... 31 1.4
gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [H... 31 1.4
gi|239756352 PREDICTED: hypothetical protein XP_002344902 [Homo ... 30 2.4
gi|169160949 PREDICTED: hypothetical protein [Homo sapiens] 30 2.4
gi|239750878 PREDICTED: hypothetical protein [Homo sapiens] 30 2.4
gi|239750418 PREDICTED: hypothetical protein XP_002347389 [Homo ... 30 2.4
>gi|22325388 F-box protein FBG4 isoform 1 [Homo sapiens]
Length = 287
Score = 602 bits (1552), Expect = e-172
Identities = 287/287 (100%), Positives = 287/287 (100%)
Query: 1 MKQGLWLLEMGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRD 60
MKQGLWLLEMGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRD
Sbjct: 1 MKQGLWLLEMGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRD 60
Query: 61 IVDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIF 120
IVDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIF
Sbjct: 61 IVDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIF 120
Query: 121 NSCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQ 180
NSCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQ
Sbjct: 121 NSCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQ 180
Query: 181 ELLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQ 240
ELLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQ
Sbjct: 181 ELLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQ 240
Query: 241 VSHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 287
VSHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS
Sbjct: 241 VSHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 287
>gi|18643385 F-box protein FBG4 isoform 2 [Homo sapiens]
Length = 278
Score = 583 bits (1503), Expect = e-167
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 10 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL 69
MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL
Sbjct: 1 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL 60
Query: 70 LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR 129
LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR
Sbjct: 61 LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR 120
Query: 130 GWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIE 189
GWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIE
Sbjct: 121 GWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIE 180
Query: 190 ICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFG 249
ICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFG
Sbjct: 181 ICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFG 240
Query: 250 KGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 287
KGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS
Sbjct: 241 KGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 278
>gi|30520327 F-box protein 27 [Homo sapiens]
Length = 283
Score = 336 bits (861), Expect = 2e-92
Identities = 164/286 (57%), Positives = 202/286 (70%), Gaps = 11/286 (3%)
Query: 10 MGARLSR---RRLPA---DPSLALDA--LPPELLVQVLSHVPPRSLVTRCRPVCRAWRDI 61
MGA +SR R+PA +P ALD LPPELL+ VLSHVPPR+L+ RCR VCR WR +
Sbjct: 1 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL 60
Query: 62 VDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFN 121
VDG +WLL LARD A GRAL +A+ C + C L R+C R P GRNLI N
Sbjct: 61 VDGQALWLLILARDHGATGRALLHLARSCQSPARNARP---CPLGRFCARRPIGRNLIRN 117
Query: 122 SCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQE 181
CG++G R W V+HGG+GW +E+N T VPGAPSQTCFVTSF WC K+Q++DL EG+W E
Sbjct: 118 PCGQEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPE 177
Query: 182 LLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQV 241
LLDS +IEICV+DWWGAR + GC+Y+L V+LLD + + KFSA PDP+ QW C V
Sbjct: 178 LLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHV 237
Query: 242 SHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 287
+HVF+N G+R+VSFE G+D W GHYGA VT+SSV VR+RLS
Sbjct: 238 THVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS 283
>gi|15812198 F-box only protein 2 [Homo sapiens]
Length = 296
Score = 181 bits (460), Expect = 5e-46
Identities = 100/267 (37%), Positives = 152/267 (56%), Gaps = 30/267 (11%)
Query: 27 LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAV 86
LD LP LL++VL+ +P LV CR VC W+++VDG +WLL+ ++ +
Sbjct: 47 LDELPEPLLLRVLAALPAAELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGGV--- 103
Query: 87 AQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFRGW-EVEHGGNGWAIEKN 145
E+++ + ++ + RNL+ N CGE+ GW +VEHGG+GW +E+
Sbjct: 104 -------EEERDHWQ-----QFYFLSKRRRNLLRNPCGEEDLEGWCDVEHGGDGWRVEE- 150
Query: 146 LTPVPGAPS---------QTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIEICVADWW 196
+PG + F +SFEWC K Q++DL EG W+ELLD+ Q I V DW+
Sbjct: 151 ---LPGDSGVEFTHDESVKKYFASSFEWCRKAQVIDLQAEGYWEELLDTTQPAIVVKDWY 207
Query: 197 GARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTE-RGCRQVSHVFTNFGKGIRYV 255
R + GC+Y+L V+LL +E + +FS+ V Q ++ G ++SH FT++G G+R+V
Sbjct: 208 SGRSDAGCLYELTVKLLSEHENVLAEFSSGQVAVPQDSDGGGWMEISHTFTDYGPGVRFV 267
Query: 256 SFEQYGRDVSSWVGHYGALVTHSSVRV 282
FE G+D W G +GA VT+SSV V
Sbjct: 268 RFEHGGQDSVYWKGWFGARVTNSSVWV 294
>gi|8922188 F-box only protein 6 [Homo sapiens]
Length = 293
Score = 174 bits (441), Expect = 8e-44
Identities = 91/269 (33%), Positives = 145/269 (53%), Gaps = 25/269 (9%)
Query: 26 ALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYA 85
+++ LP +L+++ +HVP R L+ CR VC WRD++D T+W
Sbjct: 12 SINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLW----------------- 54
Query: 86 VAQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAI 142
++CL +++ P+ + RNL+ N C E+ W+++ +GG+ W +
Sbjct: 55 -KRKCLREGFITKDWDQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKV 113
Query: 143 EK----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIEICVADWWGA 198
E + T P + FVTS+E C K QLVDLV EG W+ELLD+ + +I V DW+ A
Sbjct: 114 ESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAA 173
Query: 199 RENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFGKGIRYVSFE 258
R +CGC YQL+V+L + F P + QW +VS+ F+++ +G+RY+ F+
Sbjct: 174 RADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYILFQ 233
Query: 259 QYGRDVSSWVGHYGALVTHSSVRVRIRLS 287
GRD W G YG VT+SS+ V +++
Sbjct: 234 HGGRDTQYWAGWYGPRVTNSSIVVSPKMT 262
>gi|34878735 F-box protein 44 isoform 1 [Homo sapiens]
Length = 255
Score = 163 bits (412), Expect = 2e-40
Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 25/263 (9%)
Query: 27 LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAV 86
++ LP +L+++ +HVP R L+ CR VC WRD++D T+W
Sbjct: 6 INELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLW------------------ 47
Query: 87 AQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAIE 143
++CL E++ P+ + RNL+ N C E+GF W ++ +GG+ W +E
Sbjct: 48 KRKCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVE 107
Query: 144 K----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIEICVADWWGAR 199
P + FVTS+ C K Q+VDL EG W+EL+D+ + +I V DW+ AR
Sbjct: 108 DLSRDQRKEFPNDQVKKYFVTSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEVKDWFAAR 167
Query: 200 ENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFGKGIRYVSFEQ 259
+CG YQL V+LL + F P + Q ++ R+VSH F+N+ G+RY+ F+
Sbjct: 168 PDCGSKYQLCVQLLSSAHAPLGTFQPDPATIQQKSDAKWREVSHTFSNYPPGVRYIWFQH 227
Query: 260 YGRDVSSWVGHYGALVTHSSVRV 282
G D W G YG VT+SS+ +
Sbjct: 228 GGVDTHYWAGWYGPRVTNSSITI 250
>gi|62388868 F-box protein 44 isoform 1 [Homo sapiens]
Length = 255
Score = 163 bits (412), Expect = 2e-40
Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 25/263 (9%)
Query: 27 LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAV 86
++ LP +L+++ +HVP R L+ CR VC WRD++D T+W
Sbjct: 6 INELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLW------------------ 47
Query: 87 AQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAIE 143
++CL E++ P+ + RNL+ N C E+GF W ++ +GG+ W +E
Sbjct: 48 KRKCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVE 107
Query: 144 K----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIEICVADWWGAR 199
P + FVTS+ C K Q+VDL EG W+EL+D+ + +I V DW+ AR
Sbjct: 108 DLSRDQRKEFPNDQVKKYFVTSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEVKDWFAAR 167
Query: 200 ENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFGKGIRYVSFEQ 259
+CG YQL V+LL + F P + Q ++ R+VSH F+N+ G+RY+ F+
Sbjct: 168 PDCGSKYQLCVQLLSSAHAPLGTFQPDPATIQQKSDAKWREVSHTFSNYPPGVRYIWFQH 227
Query: 260 YGRDVSSWVGHYGALVTHSSVRV 282
G D W G YG VT+SS+ +
Sbjct: 228 GGVDTHYWAGWYGPRVTNSSITI 250
>gi|47825361 non-specific cytotoxic cell receptor protein 1 homolog
[Homo sapiens]
Length = 275
Score = 74.7 bits (182), Expect = 9e-14
Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
Query: 164 WCSKRQLVDLVMEGVWQELLDSAQIEICVADWWGARENCGCVYQLRVRLLD------VYE 217
W K+Q VDL+ EG+W+ELLD Q I V DW+ CVY+L V LL + +
Sbjct: 152 WTVKQQCVDLLAEGLWEELLDDEQPAITVMDWFEDSRLDACVYELHVWLLAADRRTVIAQ 211
Query: 218 KEVVKFSASPDPVLQWTERGCRQVSHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTH 277
V ++ P +W QVSHVF ++G G+R++ F ++ G VT
Sbjct: 212 HHVAPRTSGRGPPGRWV-----QVSHVFRHYGPGVRFIHFLHKAKNRMEPGGLRRTRVTD 266
Query: 278 SSVRVRIR 285
SSV V++R
Sbjct: 267 SSVSVQLR 274
>gi|34878749 F-box protein 44 isoform 2 [Homo sapiens]
Length = 224
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 21/120 (17%)
Query: 27 LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAV 86
++ LP +L+++ +HVP R L+ CR VC WRD++D T+W
Sbjct: 6 INELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLW------------------ 47
Query: 87 AQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAIE 143
++CL E++ P+ + RNL+ N C E+GF W ++ +GG+ W +E
Sbjct: 48 KRKCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVE 107
>gi|34878753 F-box protein 44 isoform 2 [Homo sapiens]
Length = 224
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 21/120 (17%)
Query: 27 LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAV 86
++ LP +L+++ +HVP R L+ CR VC WRD++D T+W
Sbjct: 6 INELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLW------------------ 47
Query: 87 AQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAIE 143
++CL E++ P+ + RNL+ N C E+GF W ++ +GG+ W +E
Sbjct: 48 KRKCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVE 107
>gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens]
Length = 491
Score = 40.0 bits (92), Expect = 0.002
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 13 RLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW-LLQ 71
RL+ R P ++D LP +VQ+ S +P L RC VCR W ++ P +W ++
Sbjct: 102 RLASR--PQKEQASIDRLPDHSMVQIFSFLPTNQLC-RCARVCRRWYNLAWDPRLWRTIR 158
Query: 72 LARDRSAEGRALYAVAQR 89
L + RAL + +R
Sbjct: 159 LTGETINVDRALKVLTRR 176
>gi|124248558 F-box and WD-40 domain protein 9 [Homo sapiens]
Length = 458
Score = 37.7 bits (86), Expect = 0.012
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 18 RLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLAR 74
R+ A L +LPPELL+++ S++ R ++ VC A RD+V W L+ R
Sbjct: 70 RVSAVSEPGLLSLPPELLLEICSYLDARLVLHVLSRVCHALRDLVSDHVTWRLRALR 126
>gi|27312027 F-box only protein 16 [Homo sapiens]
Length = 292
Score = 36.6 bits (83), Expect = 0.026
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 13 RLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQL 72
R + ++PA+ LP L + + S + PRSL RC VC W+++ + +W+L+
Sbjct: 75 RKLQEKIPAEALDFTTKLPRVLSLYIFSFLDPRSLC-RCAQVCWHWKNLAELDQLWMLKC 133
Query: 73 AR 74
R
Sbjct: 134 LR 135
>gi|83035136 F-box protein 31 [Homo sapiens]
Length = 539
Score = 35.8 bits (81), Expect = 0.045
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 10 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 68
+G L P P +L LPPELLV++ + +P L + + VC +R I+ T+W
Sbjct: 50 VGGGLCAGPSPPPPRCSLLELPPELLVEIFASLPGTDLPSLAQ-VCTKFRRILHTDTIW 107
>gi|122937219 F-box protein 41 [Homo sapiens]
Length = 936
Score = 35.4 bits (80), Expect = 0.058
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 9 EMGARLSRRRLPADPSLALDALPPELLVQ------VLSHVPPRSLVTRCRPVCRAWRDIV 62
E G+ RR PS + + + PE+L + +++ R+L+ VCR WR +
Sbjct: 586 EGGSGRGRRAERVSPSRSNEVISPEILKMRAALFCIFTYLDTRTLL-HAAEVCRDWRFVA 644
Query: 63 DGPTVWLLQLARDRSAEGRALYAVAQRC 90
P VW L + + L +AQ C
Sbjct: 645 RHPAVWTRVLLENARVCSKFLAMLAQWC 672
>gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens]
Length = 580
Score = 34.7 bits (78), Expect = 0.099
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 25 LALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 68
+++ PPEL+ ++S +P R LV + CR + ++ DG VW
Sbjct: 37 ISIQLFPPELVEHIISFLPVRDLVALGQ-TCRYFHEVCDGEGVW 79
>gi|11024696 F-box only protein 24 isoform 2 [Homo sapiens]
Length = 318
Score = 34.7 bits (78), Expect = 0.099
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 25 LALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 68
+++ PPEL+ ++S +P R LV + CR + ++ DG VW
Sbjct: 37 ISIQLFPPELVEHIISFLPVRDLVALGQ-TCRYFHEVCDGEGVW 79
>gi|85540447 solute carrier family 26, member 11 [Homo sapiens]
Length = 606
Score = 32.3 bits (72), Expect = 0.49
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 26 ALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRAL 83
A++AL E+L + L PPR LV C VC +V G L +L +D +G AL
Sbjct: 493 AMEALREEILSRALEVSPPRCLVLECTHVCSIDYTVVLG----LGELLQDFQKQGVAL 546
>gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo
sapiens]
Length = 1094
Score = 31.6 bits (70), Expect = 0.84
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 19 LPADPSLA-LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGP 65
LP +L+ + +LP E+L V + +P L VC WR+I+ P
Sbjct: 254 LPCQEALSHICSLPSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDP 301
>gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo
sapiens]
Length = 1043
Score = 31.6 bits (70), Expect = 0.84
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 19 LPADPSLA-LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGP 65
LP +L+ + +LP E+L V + +P L VC WR+I+ P
Sbjct: 203 LPCQEALSHICSLPSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDP 250
>gi|8923179 F-box and leucine-rich repeat protein 12 [Homo
sapiens]
Length = 326
Score = 31.6 bits (70), Expect = 0.84
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 30 LPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 68
LP +L+++ S++P R + R VC W+ +VD +W
Sbjct: 7 LPDSVLLEIFSYLPVRDRI-RISRVCHRWKRLVDDRWLW 44
>gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [Homo
sapiens]
Length = 589
Score = 30.8 bits (68), Expect = 1.4
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 27 LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 68
+ LP EL + VLS + P+ L+ + CR WR + + +W
Sbjct: 163 ISLLPKELALYVLSFLEPKDLL-QAAQTCRYWRILAEDNLLW 203
>gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [Homo
sapiens]
Length = 707
Score = 30.8 bits (68), Expect = 1.4
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 27 LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 68
+ LP EL + VLS + P+ L+ + CR WR + + +W
Sbjct: 281 ISLLPKELALYVLSFLEPKDLL-QAAQTCRYWRILAEDNLLW 321
>gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [Homo
sapiens]
Length = 627
Score = 30.8 bits (68), Expect = 1.4
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 27 LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 68
+ LP EL + VLS + P+ L+ + CR WR + + +W
Sbjct: 201 ISLLPKELALYVLSFLEPKDLL-QAAQTCRYWRILAEDNLLW 241
>gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [Homo
sapiens]
Length = 533
Score = 30.8 bits (68), Expect = 1.4
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 28 DALPPELLVQVLSHVP----PRSLVTRCRPVCRAWRDIVDGPTVW 68
D +P E+LVQ+ + P + R VCR W++ P +W
Sbjct: 113 DRIPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALW 157
>gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [Homo
sapiens]
Length = 539
Score = 30.8 bits (68), Expect = 1.4
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 28 DALPPELLVQVLSHVP----PRSLVTRCRPVCRAWRDIVDGPTVW 68
D +P E+LVQ+ + P + R VCR W++ P +W
Sbjct: 113 DRIPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALW 157
>gi|239756352 PREDICTED: hypothetical protein XP_002344902 [Homo
sapiens]
Length = 211
Score = 30.0 bits (66), Expect = 2.4
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 25 LALDALPPELLVQVLSHVPPRSLVTRCRPVCR-AWRDIVDGPTVWLL 70
++ ++PP + QV PP L + C P+C + GP++WLL
Sbjct: 156 ISSSSVPPSPISQVSPASPPPPLPSSCLPMCSLVPSPLGTGPSLWLL 202
>gi|169160949 PREDICTED: hypothetical protein [Homo sapiens]
Length = 163
Score = 30.0 bits (66), Expect = 2.4
Identities = 34/112 (30%), Positives = 42/112 (37%), Gaps = 17/112 (15%)
Query: 9 EMGARLSRRRLPADP------------SLALDALPPELLVQVLSHVPPRSLVTRCRPVCR 56
E+GAR RL A+P SL A ELL Q PR R V
Sbjct: 14 EIGARFYSSRLQAEPNTLRGLTFQINSSLQWFAKANELLFQGREESNPRKPGPEDREVWW 73
Query: 57 AWRDIVDGPTV-WLLQLARDR----SAEGRALYAVAQRCLPSNEDKEEFPLC 103
+ G W L AR S G+ALY +AQ CL + + +C
Sbjct: 74 GLAVLWTGQEAPWALDTARSSANCISGPGQALYLIAQWCLSPHLGNKANRIC 125
>gi|239750878 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 30.0 bits (66), Expect = 2.4
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 25 LALDALPPELLVQVLSHVPPRSLVTRCRPVCR-AWRDIVDGPTVWLL 70
++ ++PP + QV PP L + C P+C + GP++WLL
Sbjct: 156 ISSSSVPPSPISQVSPASPPPPLPSSCLPMCSLVPSPLGTGPSLWLL 202
>gi|239750418 PREDICTED: hypothetical protein XP_002347389 [Homo
sapiens]
Length = 220
Score = 30.0 bits (66), Expect = 2.4
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Query: 7 LLEMGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPT 66
L+E+G + R L DP ALD LP +LVQV+ PR RP C IV P
Sbjct: 111 LVEVGPVI--RALDVDPPHALDPLPLLVLVQVVG--APR------RPACGLQERIVRSPA 160
Query: 67 V 67
+
Sbjct: 161 I 161
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.138 0.459
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,527,233
Number of Sequences: 37866
Number of extensions: 586399
Number of successful extensions: 1671
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1607
Number of HSP's gapped (non-prelim): 75
length of query: 287
length of database: 18,247,518
effective HSP length: 101
effective length of query: 186
effective length of database: 14,423,052
effective search space: 2682687672
effective search space used: 2682687672
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.