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Search of human proteins with 223029426
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223029426 solute carrier family 35, member D2 [Homo sapiens]
(337 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223029426 solute carrier family 35, member D2 [Homo sapiens] 660 0.0
gi|14028875 solute carrier family 35 (UDP-glucuronic acid/UDP-N-... 375 e-104
gi|56912198 solute carrier family 35, member D3 [Homo sapiens] 78 1e-14
gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens] 69 8e-12
gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens] 69 8e-12
gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens] 69 8e-12
gi|109150412 hypothetical protein LOC85019 [Homo sapiens] 64 2e-10
gi|56699411 solute carrier family 35, member E2 [Homo sapiens] 64 2e-10
gi|27881499 solute carrier family 35, member C2 isoform a [Homo ... 55 7e-08
gi|21314776 solute carrier family 35, member C2 isoform a [Homo ... 55 7e-08
gi|160707905 similar to solute carrier family 35, member E2 [Hom... 55 1e-07
gi|47827222 solute carrier family 35, member E4 [Homo sapiens] 51 1e-06
gi|27881496 solute carrier family 35, member C2 isoform b [Homo ... 44 2e-04
gi|31542943 solute carrier family 35, member F2 [Homo sapiens] 33 0.28
gi|14249528 solute carrier family 35, member B4 [Homo sapiens] 33 0.36
gi|169160681 PREDICTED: similar to hCG2036949 [Homo sapiens] 29 5.2
gi|169161650 PREDICTED: similar to hCG2036949 [Homo sapiens] 29 5.2
gi|169161355 PREDICTED: similar to hCG2036949 [Homo sapiens] 29 5.2
gi|66392190 transmembrane protein 41B [Homo sapiens] 29 5.2
gi|110556629 transmembrane protein 145 [Homo sapiens] 29 5.2
gi|4502527 calcium channel, voltage-dependent, L type, alpha 1D ... 29 6.8
gi|5729798 cysteinyl leukotriene receptor 1 [Homo sapiens] 28 8.9
gi|194018478 TBC1 domain family, member 2B isoform a [Homo sapiens] 28 8.9
gi|194018476 TBC1 domain family, member 2B isoform b [Homo sapiens] 28 8.9
>gi|223029426 solute carrier family 35, member D2 [Homo sapiens]
Length = 337
Score = 660 bits (1702), Expect = 0.0
Identities = 337/337 (100%), Positives = 337/337 (100%)
Query: 1 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL 60
MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
Sbjct: 1 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL 60
Query: 61 GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMF 120
GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMF
Sbjct: 61 GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMF 120
Query: 121 TVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLND 180
TVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLND
Sbjct: 121 TVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLND 180
Query: 181 IFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVF 240
IFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVF
Sbjct: 181 IFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVF 240
Query: 241 ILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFV 300
ILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFV
Sbjct: 241 ILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFV 300
Query: 301 GLNICMAGGLRYSFLTLSSQLKPKPVGEENICLDLKS 337
GLNICMAGGLRYSFLTLSSQLKPKPVGEENICLDLKS
Sbjct: 301 GLNICMAGGLRYSFLTLSSQLKPKPVGEENICLDLKS 337
>gi|14028875 solute carrier family 35 (UDP-glucuronic
acid/UDP-N-acetylgalactosamine dual transporter), member
D1 [Homo sapiens]
Length = 355
Score = 375 bits (962), Expect = e-104
Identities = 179/310 (57%), Positives = 238/310 (76%), Gaps = 1/310 (0%)
Query: 27 RLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIHFPDF 86
+LL+A FYG SFLIV+VNK++LT Y FPS + +G+GQM AT+ +L+V K +++ FPD
Sbjct: 42 KLLAAGFYGVSSFLIVVVNKSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDL 101
Query: 87 DKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETIILGKQYSLN 146
D+ +P K FPLPLLY GN I+GL ST KL+LPMFTVLR+F+I T+ E ++L K +S
Sbjct: 102 DRNVPRKTFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWG 161
Query: 147 IILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKYGVLF 206
I ++VFA+I+GAF+AA SDLAF+LEGY F+ +ND+ TAANG Y KQK+D KELGKYG+L+
Sbjct: 162 IKMTVFAMIIGAFVAASSDLAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLY 221
Query: 207 YNACFMIIPTLIISVSTGDLQQATEFNQWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNS 266
YNA FMI+PTL I+ TGD Q+A EF W + +F+LQF LSC +GF+LMY+TVLC+ YNS
Sbjct: 222 YNALFMILPTLAIAYFTGDAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNS 281
Query: 267 ALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAGGLRYSFLTLSSQLKPKPV 326
ALTT +VG IKN+ + YIG++ GGDYIF+ NF+GLNI +AG L YS++T + + K
Sbjct: 282 ALTTTIVGCIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQLSKQ- 340
Query: 327 GEENICLDLK 336
E N LD+K
Sbjct: 341 SEANNKLDIK 350
>gi|56912198 solute carrier family 35, member D3 [Homo sapiens]
Length = 416
Score = 77.8 bits (190), Expect = 1e-14
Identities = 74/315 (23%), Positives = 137/315 (43%), Gaps = 9/315 (2%)
Query: 24 RVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIHF 83
RV + A+ +G S + ++ K L++ Y F + + + L + + +I
Sbjct: 8 RVLGISVAIAHGVFSGSLNILLKFLISRYQFSFLTLVQCLTSSTAALSLELLRRLGLIAV 67
Query: 84 PDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETIILGKQY 143
P F + + +L L S LSLPM+ V ++ +T+L+ ++L
Sbjct: 68 PPFGLSLARSFAGVAVLSTLQSSLTLWSLRGLSLPMYVVFKRCLPLVTMLIGVLVLKNGA 127
Query: 144 -SLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKY 202
S ++ +V GA +A DL + GY+ L + AA V ++ E G
Sbjct: 128 PSPGVLAAVLITTCGAALAGAGDLTGDPIGYVTGVLAVLVHAAYLVLIQKASADTEHGPL 187
Query: 203 GVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVFILQFLLSCFLGFLLMYSTVLCS 262
+ A +I S ++ D A F WK+ + F+ +G + ++T+ C+
Sbjct: 188 TAQYVIAVSATPLLVICSFASTDSIHAWTFPGWKDPAMVCIFVACILIGCAMNFTTLHCT 247
Query: 263 YYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAGGLRY---SFLTLSS 319
Y NSA+TT+ VG +K+++ +G++ D + L G+ + G + Y F+
Sbjct: 248 YINSAVTTSFVGVVKSIATITVGMVAFSDVEPTSLFIAGVVVNTLGSIIYCVAKFMETRK 307
Query: 320 Q-----LKPKPVGEE 329
Q L+ +P GEE
Sbjct: 308 QSNYEDLEAQPRGEE 322
>gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens]
Length = 364
Score = 68.6 bits (166), Expect = 8e-12
Identities = 73/296 (24%), Positives = 130/296 (43%), Gaps = 21/296 (7%)
Query: 7 AEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGF--PSPIFLGIGQ 64
AEAE G +P R ++A ++S Y S +V +NK LL + +PIF+ Q
Sbjct: 24 AEAEANGEKPFLLRA-LQIALVVS--LYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQ 80
Query: 65 -MAATIMILYVSKLNKI----IHFPDF--DKKIPVKLFPLPLLYVGNHISGLSSTSKLSL 117
+ T++ +S L + FP D ++ + PL ++++G + +
Sbjct: 81 CLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGV 140
Query: 118 PMFTVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAA---GSDLAFNLEGYI 174
+ V R T +LL ++L + S +L+ II G ++ G++ + G +
Sbjct: 141 AFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTV 200
Query: 175 FVFLNDIFTAANGVYTKQKMDPKELGKYGVLFYN---ACFMIIPTLIISVSTGDLQQATE 231
F L + + N +YT + + + + + FYN AC + +P L++ G+LQ +
Sbjct: 201 FGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLL---LGELQALRD 257
Query: 232 FNQWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGIL 287
F Q + F L GF + Y T L + S LT V G K + + +L
Sbjct: 258 FAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVL 313
>gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens]
Length = 351
Score = 68.6 bits (166), Expect = 8e-12
Identities = 73/296 (24%), Positives = 130/296 (43%), Gaps = 21/296 (7%)
Query: 7 AEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGF--PSPIFLGIGQ 64
AEAE G +P R ++A ++S Y S +V +NK LL + +PIF+ Q
Sbjct: 11 AEAEANGEKPFLLRA-LQIALVVS--LYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQ 67
Query: 65 -MAATIMILYVSKLNKI----IHFPDF--DKKIPVKLFPLPLLYVGNHISGLSSTSKLSL 117
+ T++ +S L + FP D ++ + PL ++++G + +
Sbjct: 68 CLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGV 127
Query: 118 PMFTVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAA---GSDLAFNLEGYI 174
+ V R T +LL ++L + S +L+ II G ++ G++ + G +
Sbjct: 128 AFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTV 187
Query: 175 FVFLNDIFTAANGVYTKQKMDPKELGKYGVLFYN---ACFMIIPTLIISVSTGDLQQATE 231
F L + + N +YT + + + + + FYN AC + +P L++ G+LQ +
Sbjct: 188 FGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLL---LGELQALRD 244
Query: 232 FNQWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGIL 287
F Q + F L GF + Y T L + S LT V G K + + +L
Sbjct: 245 FAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVL 300
>gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens]
Length = 351
Score = 68.6 bits (166), Expect = 8e-12
Identities = 73/296 (24%), Positives = 130/296 (43%), Gaps = 21/296 (7%)
Query: 7 AEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGF--PSPIFLGIGQ 64
AEAE G +P R ++A ++S Y S +V +NK LL + +PIF+ Q
Sbjct: 11 AEAEANGEKPFLLRA-LQIALVVS--LYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQ 67
Query: 65 -MAATIMILYVSKLNKI----IHFPDF--DKKIPVKLFPLPLLYVGNHISGLSSTSKLSL 117
+ T++ +S L + FP D ++ + PL ++++G + +
Sbjct: 68 CLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGV 127
Query: 118 PMFTVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAA---GSDLAFNLEGYI 174
+ V R T +LL ++L + S +L+ II G ++ G++ + G +
Sbjct: 128 AFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTV 187
Query: 175 FVFLNDIFTAANGVYTKQKMDPKELGKYGVLFYN---ACFMIIPTLIISVSTGDLQQATE 231
F L + + N +YT + + + + + FYN AC + +P L++ G+LQ +
Sbjct: 188 FGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLL---LGELQALRD 244
Query: 232 FNQWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGIL 287
F Q + F L GF + Y T L + S LT V G K + + +L
Sbjct: 245 FAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVL 300
>gi|109150412 hypothetical protein LOC85019 [Homo sapiens]
Length = 296
Score = 63.9 bits (154), Expect = 2e-10
Identities = 59/239 (24%), Positives = 98/239 (41%), Gaps = 9/239 (3%)
Query: 25 VARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIHFP 84
V R L L + TC L NK +L+ F P Q ++L+VS +
Sbjct: 3 VRRSLVGLTFCTCYLASYLTNKYVLSVLKFTYPTLFQGWQTLIGGLLLHVSWKLGWVEIN 62
Query: 85 DFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETIILGKQYS 144
+ + P +L+VG +G + S+L++P+F L + + ++ S
Sbjct: 63 SSSRSHVLVWLPASVLFVGIIYAGSRALSRLAIPVFLTLHNVAEVIICGYQKCFQKEKTS 122
Query: 145 LNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKYGV 204
I S ++ A +D FN +GY + ++ + A + K + P L
Sbjct: 123 PAKICSALLLLAAAGCLPFNDSQFNPDGYFWAIIHLLCVGAYKILQKSQ-KPSALSDIDQ 181
Query: 205 LFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVFILQFLLSC----FLGFLLMYSTV 259
+ N F ++ S TGDL +F ++ +F SC FLGF LM+STV
Sbjct: 182 QYLNYIFSVVLLAFASHPTGDLFSVLDF----PFLYFYRFHGSCCASGFLGFFLMFSTV 236
>gi|56699411 solute carrier family 35, member E2 [Homo sapiens]
Length = 313
Score = 63.9 bits (154), Expect = 2e-10
Identities = 73/296 (24%), Positives = 125/296 (42%), Gaps = 19/296 (6%)
Query: 32 LFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIHFPDFDKKIP 91
LF S IV +NK + +GFP+ + L + T + LY+ + D P
Sbjct: 19 LFNLLVSICIVFLNKWIYVYHGFPN-MSLTLVHFVVTWLGLYICQ--------KLDIFAP 69
Query: 92 VKLFPLPLLYVGNHISGLSSTSKLSLPMFTV-----LRKFTIPLTLLLETIILGKQYSLN 146
L P LL + G + LSL T+ + T P+ + ++T K +S
Sbjct: 70 KSLPPSRLLLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTFSTR 129
Query: 147 IILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKYGVLF 206
I L++ I LG + + D+ FN G +F L + T+ V+ K ++ +L+
Sbjct: 130 IQLTLIPITLGVILNSYYDVKFNFLGMVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLY 189
Query: 207 YNACFMIIPTLIISVSTGD--LQQATEFNQWKNVVFILQFLLSCFLGFLLMYSTVLCSYY 264
Y A M L+++V + + F W +V +L LLS + F++ S
Sbjct: 190 YQAP-MSSAMLLVAVPFFEPVFGEGGIFGPW-SVSALLMVLLSGVIAFMVNLSIYWIIGN 247
Query: 265 NSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAGGLRYSFLTLSSQ 320
S +T + G K + G ++ D + S+ +G+ + G L Y+ LS Q
Sbjct: 248 TSPVTYNMFGHFKFCITLFGGYVLFKDPL-SINQALGILCTLFGILAYTHFKLSEQ 302
>gi|27881499 solute carrier family 35, member C2 isoform a [Homo
sapiens]
Length = 365
Score = 55.5 bits (132), Expect = 7e-08
Identities = 67/299 (22%), Positives = 126/299 (42%), Gaps = 33/299 (11%)
Query: 32 LFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKL---------NKIIH 82
L Y S I NK L ++ FP +F+ + +A + +S+ ++
Sbjct: 22 LLYYCFSIGITFYNKWLTKSFHFP--LFMTMLHLAVIFLFSALSRALVQCSSHRARVVLS 79
Query: 83 FPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKL--SLPMFTVLRKFTIPLTLLLETIILG 140
+ D+ +++ L GLS+ S L ++ ++T+ + + L+ I
Sbjct: 80 WADYLRRVAPTALATALDV------GLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKL 133
Query: 141 KQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELG 200
++ ++L V I G F+ FN+EG+ V T+ + ELG
Sbjct: 134 EELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGIRWTLTQMLLQKAELG 193
Query: 201 KYGVLFYNACFMIIPTL------IISVSTG-DLQQATEFNQWKNVVFILQFLLSCFLG-- 251
+ + F + P + + +V G L + + ++++ +L+ L S FLG
Sbjct: 194 LQNPI--DTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGI 251
Query: 252 --FLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAG 308
F L +S L S+LT ++ G K V + + GD I SLLN++G +C++G
Sbjct: 252 LAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQI-SLLNWLGFALCLSG 309
>gi|21314776 solute carrier family 35, member C2 isoform a [Homo
sapiens]
Length = 365
Score = 55.5 bits (132), Expect = 7e-08
Identities = 67/299 (22%), Positives = 126/299 (42%), Gaps = 33/299 (11%)
Query: 32 LFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKL---------NKIIH 82
L Y S I NK L ++ FP +F+ + +A + +S+ ++
Sbjct: 22 LLYYCFSIGITFYNKWLTKSFHFP--LFMTMLHLAVIFLFSALSRALVQCSSHRARVVLS 79
Query: 83 FPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKL--SLPMFTVLRKFTIPLTLLLETIILG 140
+ D+ +++ L GLS+ S L ++ ++T+ + + L+ I
Sbjct: 80 WADYLRRVAPTALATALDV------GLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKL 133
Query: 141 KQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELG 200
++ ++L V I G F+ FN+EG+ V T+ + ELG
Sbjct: 134 EELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGIRWTLTQMLLQKAELG 193
Query: 201 KYGVLFYNACFMIIPTL------IISVSTG-DLQQATEFNQWKNVVFILQFLLSCFLG-- 251
+ + F + P + + +V G L + + ++++ +L+ L S FLG
Sbjct: 194 LQNPI--DTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGI 251
Query: 252 --FLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAG 308
F L +S L S+LT ++ G K V + + GD I SLLN++G +C++G
Sbjct: 252 LAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQI-SLLNWLGFALCLSG 309
>gi|160707905 similar to solute carrier family 35, member E2 [Homo
sapiens]
Length = 405
Score = 54.7 bits (130), Expect = 1e-07
Identities = 66/302 (21%), Positives = 130/302 (43%), Gaps = 17/302 (5%)
Query: 23 SRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIH 82
SR L+ F+ SF + +NK +L+ G P LG QM +T +I V L
Sbjct: 73 SRALLYLTLWFF--FSFCTLFLNKYILSLLG-GEPSMLGAVQMLSTTVIGCVKTLVPCCL 129
Query: 83 FPDFDKKIPVKLFPLPLLYVG-----NHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETI 137
+ + F + +L+VG + GL S +++ ++ T+++ +
Sbjct: 130 YQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRM 189
Query: 138 ILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKM--D 195
ILG+ L + LS+ ++ G + ++++FN+ G+ +I V++K+ + D
Sbjct: 190 ILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCLQNVFSKKLLSGD 249
Query: 196 PKELGKYGVLFYN---ACFMIIPTLIISVSTGDL-QQATEFNQWKNVVFILQFLLSCFLG 251
+ FY A M++P + + + F+ ++VV +L L L
Sbjct: 250 KYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDVVLLL--LTDGVLF 307
Query: 252 FLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAGGLR 311
L + S +T +V +K+ ++ +++ G+ I S L+ VG + G L
Sbjct: 308 HLQSVTAYALMGKISPVTFSVASTVKHALSIWLSVIVFGNKITS-LSAVGTALVTVGVLL 366
Query: 312 YS 313
Y+
Sbjct: 367 YN 368
>gi|47827222 solute carrier family 35, member E4 [Homo sapiens]
Length = 350
Score = 51.2 bits (121), Expect = 1e-06
Identities = 65/318 (20%), Positives = 121/318 (38%), Gaps = 21/318 (6%)
Query: 3 AGGQAEAEGAG----GEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPI 58
A G A+A G G P A R P R ++AL + + +NK + T +GF P+
Sbjct: 21 AAGGAQAAGPPEWPPGSPQALRQPGRARVAMAALVWLLAGASMSSLNKWIFTVHGFGRPL 80
Query: 59 FLGIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLP 118
L M + + + P + ++ L L + + G + L
Sbjct: 81 LLSALHMLVAALACHRGARRPM---PGGTR---CRVLLLSLTFGTSMACGNVGLRAVPLD 134
Query: 119 MFTVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFL 178
+ ++ T TL L ++LG+++ + ++ + LGA + + G F+
Sbjct: 135 LAQLVTTTTPLFTLALSALLLGRRHHPLQLAAMGPLCLGAACSLAGEFRTPPTGCGFLLA 194
Query: 179 NDIFTAANGVYTKQKMDPKELGKYGVLFYNA----CFMIIPTLIISVSTGDLQQATEFNQ 234
V + + L +L+ + C + L++ A +
Sbjct: 195 ATCLRGLKSVQQSALLQEERLDAVTLLYATSLPSFCLLAGAALVLEAGVAPPPTAGDSRL 254
Query: 235 WKNVVFILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIF 294
W + LLSC L L ++ SALT V+G + V + L+ G +
Sbjct: 255 WACI------LLSCLLSVLYNLASFSLLALTSALTVHVLGNLTVVGNLILSRLLFGSRL- 307
Query: 295 SLLNFVGLNICMAGGLRY 312
S L++VG+ + ++G Y
Sbjct: 308 SALSYVGIALTLSGMFLY 325
>gi|27881496 solute carrier family 35, member C2 isoform b [Homo
sapiens]
Length = 344
Score = 44.3 bits (103), Expect = 2e-04
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 143 YSLNIILSVFAIILGAFIAAGSDLA--FNLEGYIFVFLNDIFTAANGVYTKQKMDPKELG 200
Y++ +V I++ + I +L+ FN+EG+ V T+ + ELG
Sbjct: 113 YTMTKSSAVLFILIFSLIFKLEELSTQFNVEGFALVLGASFIGGIRWTLTQMLLQKAELG 172
Query: 201 KYGVLFYNACFMIIPTLII------SVSTG-DLQQATEFNQWKNVVFILQFLLSCFLG-- 251
+ + F + P + + +V G L + + ++++ +L+ L S FLG
Sbjct: 173 LQNPI--DTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGI 230
Query: 252 --FLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAG 308
F L +S L S+LT ++ G K V + + GD I SLLN++G +C++G
Sbjct: 231 LAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQI-SLLNWLGFALCLSG 288
Score = 30.4 bits (67), Expect = 2.3
Identities = 38/131 (29%), Positives = 55/131 (41%), Gaps = 11/131 (8%)
Query: 26 ARLLSALFYGTCSFLI--VLVNKALL-------TTYGFPSPIFLGIGQMAATIMILYVSK 76
A +L A F G + + +L+ KA L T + +FLG+ + A L++S
Sbjct: 146 ALVLGASFIGGIRWTLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLST 205
Query: 77 LNKIIHFPDFDKKIPV--KLFPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLL 134
KI F D + V LF +L G S S+ S ++ F TLLL
Sbjct: 206 SEKIFRFQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLL 265
Query: 135 ETIILGKQYSL 145
+LG Q SL
Sbjct: 266 AAHLLGDQISL 276
>gi|31542943 solute carrier family 35, member F2 [Homo sapiens]
Length = 374
Score = 33.5 bits (75), Expect = 0.28
Identities = 48/216 (22%), Positives = 85/216 (39%), Gaps = 35/216 (16%)
Query: 116 SLPMFTVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLE---- 171
+L +L F IP+ + L IL +Y + ++V +LG G+D+ E
Sbjct: 133 TLTSVQLLDCFGIPVLMALSWFILHARYRVIHFIAVAVCLLGVGTMVGADILAGREDNSG 192
Query: 172 -----GYIFVFLNDIFTAANGV---YTKQKMDPKE----LGKYGVLFYNACFMIIPTLII 219
G I V L A + V Y +K+ +E +G +G + +I+ I
Sbjct: 193 SDVLIGDILVLLGASLYAISNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDI 252
Query: 220 SVSTGDLQQATEFNQWKNVVFILQFLLS--CFLGFL-LMYSTVLCSYYNSALTTAVVGAI 276
+ D WK + + F L C F+ L+ + N + TA + ++
Sbjct: 253 ASIHWD---------WKIALLFVAFALCMFCLYSFMPLVIKVTSATSVNLGILTADLYSL 303
Query: 277 KNVSVAYIGILIGGDYIFSLLNFVGLNICMAGGLRY 312
++G+ + G Y FS L + + M G + Y
Sbjct: 304 ------FVGLFLFG-YKFSGLYILSFTVIMVGFILY 332
>gi|14249528 solute carrier family 35, member B4 [Homo sapiens]
Length = 331
Score = 33.1 bits (74), Expect = 0.36
Identities = 30/142 (21%), Positives = 64/142 (45%), Gaps = 15/142 (10%)
Query: 24 RVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIHF 83
R A + +F G CS +I L L P G G + L+++ + +
Sbjct: 2 RPALAVGLVFAGCCSNVIFLE----LLARKHP-----GCGNIVTFAQFLFIA-VEGFLFE 51
Query: 84 PDFDKK---IPVKLFPL--PLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETII 138
D +K IP++ + + + + + ++ + +++P+ + R ++ ++L II
Sbjct: 52 ADLGRKPPAIPIRYYAIMVTMFFTVSVVNNYALNLNIAMPLHMIFRSGSLIANMILGIII 111
Query: 139 LGKQYSLNIILSVFAIILGAFI 160
L K+YS+ S+ + +G FI
Sbjct: 112 LKKRYSIFKYTSIALVSVGIFI 133
>gi|169160681 PREDICTED: similar to hCG2036949 [Homo sapiens]
Length = 340
Score = 29.3 bits (64), Expect = 5.2
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 37 CSFLIVLVNK-ALLTTYGFPSPIFLGI-GQMAATIMILYVSKLNKIIHFPDFDKKIPVKL 94
CS L +N A+ TT+G S + LG+ G ++ + I+YVS + H + +P
Sbjct: 216 CSKLGAELNDFAVFTTFGLASALLLGVDGLLSGILAIIYVSAAS--FHLCFYSPGVPSTY 273
Query: 95 FPLPLLYVGNHISGLSSTSK 114
LP Y ++ S +K
Sbjct: 274 KGLPCPYASCILASTSLLTK 293
>gi|169161650 PREDICTED: similar to hCG2036949 [Homo sapiens]
Length = 340
Score = 29.3 bits (64), Expect = 5.2
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 37 CSFLIVLVNK-ALLTTYGFPSPIFLGI-GQMAATIMILYVSKLNKIIHFPDFDKKIPVKL 94
CS L +N A+ TT+G S + LG+ G ++ + I+YVS + H + +P
Sbjct: 216 CSKLGAELNDFAVFTTFGLASALLLGVDGLLSGILAIIYVSAAS--FHLCFYSPGVPSTY 273
Query: 95 FPLPLLYVGNHISGLSSTSK 114
LP Y ++ S +K
Sbjct: 274 KGLPCPYASCILASTSLLTK 293
>gi|169161355 PREDICTED: similar to hCG2036949 [Homo sapiens]
Length = 340
Score = 29.3 bits (64), Expect = 5.2
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 37 CSFLIVLVNK-ALLTTYGFPSPIFLGI-GQMAATIMILYVSKLNKIIHFPDFDKKIPVKL 94
CS L +N A+ TT+G S + LG+ G ++ + I+YVS + H + +P
Sbjct: 216 CSKLGAELNDFAVFTTFGLASALLLGVDGLLSGILAIIYVSAAS--FHLCFYSPGVPSTY 273
Query: 95 FPLPLLYVGNHISGLSSTSK 114
LP Y ++ S +K
Sbjct: 274 KGLPCPYASCILASTSLLTK 293
>gi|66392190 transmembrane protein 41B [Homo sapiens]
Length = 291
Score = 29.3 bits (64), Expect = 5.2
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Query: 256 YSTVLCSYYNSAL---TTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAGGLRY 312
Y VL +Y+ + + T A+ G+I ++ IL G Y F L F+ +C+ GL
Sbjct: 110 YVQVLVAYFATYIFLQTFAIPGSI------FLSILSGFLYPFPLALFL---VCLCSGLGA 160
Query: 313 SFLTLSSQLKPKPV 326
SF + S L +PV
Sbjct: 161 SFCYMLSYLVGRPV 174
>gi|110556629 transmembrane protein 145 [Homo sapiens]
Length = 493
Score = 29.3 bits (64), Expect = 5.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 238 VVFILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVV 273
++FIL F LSC+ G+LL +L + Y + A V
Sbjct: 179 LIFILIFFLSCYFGYLLKGRQLLHTTYKMFMAAAGV 214
>gi|4502527 calcium channel, voltage-dependent, L type, alpha 1D
subunit isoform a [Homo sapiens]
Length = 2181
Score = 28.9 bits (63), Expect = 6.8
Identities = 44/189 (23%), Positives = 69/189 (36%), Gaps = 40/189 (21%)
Query: 2 TAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVL--VNKALLTTYGFPSPIF 59
T GG + +GG A RV R L L G S +VL + KA++ +
Sbjct: 221 TEGGNHSSGKSGGFDVKALRAFRVLRPLR-LVSGVPSLQVVLNSIIKAMVPLLHIALLVL 279
Query: 60 LGIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLFPLPLLYVGNHIS------------ 107
I A + L++ K++K F D D I + P P + GN
Sbjct: 280 FVIIIYAIIGLELFIGKMHKTCFFADSD--IVAEEDPAPCAFSGNGRQCTANGTECRSGW 337
Query: 108 -----GLSSTSKLSLPMFTVLRKFTI------------------PLTLLLETIILGKQYS 144
G+++ + M TV + T+ P + IILG +
Sbjct: 338 VGPNGGITNFDNFAFAMLTVFQCITMEGWTDVLYWVNDAIGWEWPWVYFVSLIILGSFFV 397
Query: 145 LNIILSVFA 153
LN++L V +
Sbjct: 398 LNLVLGVLS 406
>gi|5729798 cysteinyl leukotriene receptor 1 [Homo sapiens]
Length = 337
Score = 28.5 bits (62), Expect = 8.9
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 233 NQWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVS 280
NQ KN V +L ++ S F+GF++ + ++ Y LT KN+S
Sbjct: 180 NQTKNHVLVLHYV-SLFVGFIIPFVIIIVCYTMIILTLLKKSMKKNLS 226
>gi|194018478 TBC1 domain family, member 2B isoform a [Homo
sapiens]
Length = 963
Score = 28.5 bits (62), Expect = 8.9
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 4 GGQAEAEGAGGEPGA--ARLPSRVARLLSAL 32
GG+ A+GA EPGA AR P+R+ L L
Sbjct: 14 GGEGAAQGAAAEPGAGPAREPARLCGYLQKL 44
>gi|194018476 TBC1 domain family, member 2B isoform b [Homo
sapiens]
Length = 914
Score = 28.5 bits (62), Expect = 8.9
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 4 GGQAEAEGAGGEPGA--ARLPSRVARLLSAL 32
GG+ A+GA EPGA AR P+R+ L L
Sbjct: 14 GGEGAAQGAAAEPGAGPAREPARLCGYLQKL 44
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.143 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,090,499
Number of Sequences: 37866
Number of extensions: 439338
Number of successful extensions: 1635
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1609
Number of HSP's gapped (non-prelim): 29
length of query: 337
length of database: 18,247,518
effective HSP length: 103
effective length of query: 234
effective length of database: 14,347,320
effective search space: 3357272880
effective search space used: 3357272880
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.