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Search of human proteins with 222352158
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|222352158 carboxypeptidase 3, cytosolic [Homo sapiens]
(920 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|222352158 carboxypeptidase 3, cytosolic [Homo sapiens] 1909 0.0
gi|31657119 carboxypeptidase 2, cytosolic [Homo sapiens] 703 0.0
gi|170763513 ATP/GTP binding protein 1 [Homo sapiens] 355 8e-98
gi|120444924 ATP/GTP binding protein-like 1 [Homo sapiens] 335 9e-92
gi|190194403 ATP/GTP binding protein-like 4 [Homo sapiens] 239 7e-63
gi|118421091 ATP/GTP binding protein-like 5 isoform 1 [Homo sapi... 141 2e-33
gi|78482633 ATP/GTP binding protein-like 5 isoform 3 [Homo sapiens] 141 2e-33
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens] 37 0.065
gi|121114302 cullin 4B isoform 2 [Homo sapiens] 33 1.2
gi|121114298 cullin 4B isoform 1 [Homo sapiens] 33 1.2
gi|55749769 CWC22 spliceosome-associated protein homolog [Homo s... 33 1.2
gi|4885583 Rho-associated, coiled-coil containing protein kinase... 33 1.6
gi|52317130 olfactory receptor, family 5, subfamily L, member 2 ... 33 1.6
gi|116295256 heparan sulfate 6-O-sulfotransferase 2 isoform L [H... 32 2.1
gi|116295254 heparan sulfate 6-O-sulfotransferase 2 isoform S [H... 32 2.1
gi|169169045 PREDICTED: similar to glutathione S-transferase alp... 32 2.7
gi|113418092 PREDICTED: similar to glutathione S-transferase alp... 32 2.7
gi|113417526 PREDICTED: similar to glutathione S-transferase alp... 32 2.7
gi|42542403 CGI-01 protein isoform 1 [Homo sapiens] 32 3.5
gi|42542405 CGI-01 protein isoform 2 [Homo sapiens] 32 3.5
gi|55956895 CGI-01 protein isoform 3 [Homo sapiens] 32 3.5
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 32 3.5
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 31 4.6
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 31 4.6
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 31 4.6
gi|42718011 cyclic nucleotide gated channel alpha 2 [Homo sapiens] 31 4.6
gi|155030242 WD repeat domain 60 [Homo sapiens] 31 6.0
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 31 6.0
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 31 6.0
gi|51173730 Sma- and Mad-related protein 2 isoform 1 [Homo sapiens] 30 7.9
>gi|222352158 carboxypeptidase 3, cytosolic [Homo sapiens]
Length = 920
Score = 1909 bits (4944), Expect = 0.0
Identities = 920/920 (100%), Positives = 920/920 (100%)
Query: 1 MSEDSEKEDYSDRTISDEDESDEDMFMKFVSEDLHRCALLTADSFGDPFFPRTTQILLEY 60
MSEDSEKEDYSDRTISDEDESDEDMFMKFVSEDLHRCALLTADSFGDPFFPRTTQILLEY
Sbjct: 1 MSEDSEKEDYSDRTISDEDESDEDMFMKFVSEDLHRCALLTADSFGDPFFPRTTQILLEY 60
Query: 61 QLGRWVPRLREPRDLYGVSSSGPLSPTRWPYHCEVIDEKVQHIDWTPSCPEPVYIPTGLE 120
QLGRWVPRLREPRDLYGVSSSGPLSPTRWPYHCEVIDEKVQHIDWTPSCPEPVYIPTGLE
Sbjct: 61 QLGRWVPRLREPRDLYGVSSSGPLSPTRWPYHCEVIDEKVQHIDWTPSCPEPVYIPTGLE 120
Query: 121 TEPLYPDSKEATVVYLAEDAYKEPCFVYSRVGGNRTPLKQPVDYRDNTLMFEARFESGNL 180
TEPLYPDSKEATVVYLAEDAYKEPCFVYSRVGGNRTPLKQPVDYRDNTLMFEARFESGNL
Sbjct: 121 TEPLYPDSKEATVVYLAEDAYKEPCFVYSRVGGNRTPLKQPVDYRDNTLMFEARFESGNL 180
Query: 181 QKVVKVAEYEYQLTVRPDLFTNKHTQWYYFQVTNMRAGIVYRFTIVNFTKPASLYSRGMR 240
QKVVKVAEYEYQLTVRPDLFTNKHTQWYYFQVTNMRAGIVYRFTIVNFTKPASLYSRGMR
Sbjct: 181 QKVVKVAEYEYQLTVRPDLFTNKHTQWYYFQVTNMRAGIVYRFTIVNFTKPASLYSRGMR 240
Query: 241 PLFYSEKEAKAHHIGWQRIGDQIKYYRNNPGQDGRHYFSLTWTFQFPHNKDTCYFAHCYP 300
PLFYSEKEAKAHHIGWQRIGDQIKYYRNNPGQDGRHYFSLTWTFQFPHNKDTCYFAHCYP
Sbjct: 241 PLFYSEKEAKAHHIGWQRIGDQIKYYRNNPGQDGRHYFSLTWTFQFPHNKDTCYFAHCYP 300
Query: 301 YTYTNLQEYLSGINNDPVRSKFCKIRVLCHTLARNMVYILTITTPLKNSDSRKRKAVILT 360
YTYTNLQEYLSGINNDPVRSKFCKIRVLCHTLARNMVYILTITTPLKNSDSRKRKAVILT
Sbjct: 301 YTYTNLQEYLSGINNDPVRSKFCKIRVLCHTLARNMVYILTITTPLKNSDSRKRKAVILT 360
Query: 361 ARVHPGETNSSWIMKGFLDYILGNSSDAQLLRDTFVFKVVPMLNPDGVIVGNYRCSLAGR 420
ARVHPGETNSSWIMKGFLDYILGNSSDAQLLRDTFVFKVVPMLNPDGVIVGNYRCSLAGR
Sbjct: 361 ARVHPGETNSSWIMKGFLDYILGNSSDAQLLRDTFVFKVVPMLNPDGVIVGNYRCSLAGR 420
Query: 421 DLNRNYTSLLKESFPSVWYTRNMVHRLMEKREVILYCDLHGHSRKENIFMYGCDGSDRSK 480
DLNRNYTSLLKESFPSVWYTRNMVHRLMEKREVILYCDLHGHSRKENIFMYGCDGSDRSK
Sbjct: 421 DLNRNYTSLLKESFPSVWYTRNMVHRLMEKREVILYCDLHGHSRKENIFMYGCDGSDRSK 480
Query: 481 TLYLQQRIFPLMLSKNCPDKFSFSACKFNVQKSKEGTGRVVMWKMGIRNSFTMEATFCGS 540
TLYLQQRIFPLMLSKNCPDKFSFSACKFNVQKSKEGTGRVVMWKMGIRNSFTMEATFCGS
Sbjct: 481 TLYLQQRIFPLMLSKNCPDKFSFSACKFNVQKSKEGTGRVVMWKMGIRNSFTMEATFCGS 540
Query: 541 TLGNKRGTHFSTKDLESMGYHFCDSLLDYCDPDRTKYYRCLKELEEMERHITLEKVFEDS 600
TLGNKRGTHFSTKDLESMGYHFCDSLLDYCDPDRTKYYRCLKELEEMERHITLEKVFEDS
Sbjct: 541 TLGNKRGTHFSTKDLESMGYHFCDSLLDYCDPDRTKYYRCLKELEEMERHITLEKVFEDS 600
Query: 601 DTPVIDITLDVESSSRGSDSSESIDSLTYLLKLTSQKKHLKTKKERNSTIASHQNARGQE 660
DTPVIDITLDVESSSRGSDSSESIDSLTYLLKLTSQKKHLKTKKERNSTIASHQNARGQE
Sbjct: 601 DTPVIDITLDVESSSRGSDSSESIDSLTYLLKLTSQKKHLKTKKERNSTIASHQNARGQE 660
Query: 661 VYDRGHLLQRHTQSNSDVKDTRPNEPDDYMVDYFRRQLPNQGLDLHHNLKSKIKECISFQ 720
VYDRGHLLQRHTQSNSDVKDTRPNEPDDYMVDYFRRQLPNQGLDLHHNLKSKIKECISFQ
Sbjct: 661 VYDRGHLLQRHTQSNSDVKDTRPNEPDDYMVDYFRRQLPNQGLDLHHNLKSKIKECISFQ 720
Query: 721 SKKTGINWTDDEKRSYKDKGIVQTQEILQYLLPIVHSTKNMQTTQIKQLFNPRTNFQIQH 780
SKKTGINWTDDEKRSYKDKGIVQTQEILQYLLPIVHSTKNMQTTQIKQLFNPRTNFQIQH
Sbjct: 721 SKKTGINWTDDEKRSYKDKGIVQTQEILQYLLPIVHSTKNMQTTQIKQLFNPRTNFQIQH 780
Query: 781 QLNPATCRNIKKYSTSWTAPRNHPFVIQGDVMANSSEWVQSKPHRSLESLSPLKGPKKNK 840
QLNPATCRNIKKYSTSWTAPRNHPFVIQGDVMANSSEWVQSKPHRSLESLSPLKGPKKNK
Sbjct: 781 QLNPATCRNIKKYSTSWTAPRNHPFVIQGDVMANSSEWVQSKPHRSLESLSPLKGPKKNK 840
Query: 841 HSQIWAIKNEDIKPLSSKWETASSSFGMDANVLKYKSLQAEETNQQSSKHTALHLTKNKD 900
HSQIWAIKNEDIKPLSSKWETASSSFGMDANVLKYKSLQAEETNQQSSKHTALHLTKNKD
Sbjct: 841 HSQIWAIKNEDIKPLSSKWETASSSFGMDANVLKYKSLQAEETNQQSSKHTALHLTKNKD 900
Query: 901 EQANKNDGQPTLYLKFQRES 920
EQANKNDGQPTLYLKFQRES
Sbjct: 901 EQANKNDGQPTLYLKFQRES 920
>gi|31657119 carboxypeptidase 2, cytosolic [Homo sapiens]
Length = 902
Score = 703 bits (1814), Expect = 0.0
Identities = 355/637 (55%), Positives = 459/637 (72%), Gaps = 26/637 (4%)
Query: 52 RTTQILLEYQLGRWVPRLREPRDLYGV-SSSGPLSPTRWPYHCEVIDEKVQHIDWTPSCP 110
R+ Q+L + +L PRLREP++L+ + S+ PL RWP CEVI E + HI+W P P
Sbjct: 144 RSRQLLYD-ELDEVNPRLREPQELFSILSTKRPLQAPRWPIECEVIKENIHHIEWAPPQP 202
Query: 111 EPVYIPTGLETEPLYPDSKEATVVYLAEDAYKEPC-FVYSRVGGNRTPLKQPV----DYR 165
E Y P G E P K+ TVVY + E F SRVGG R +K+
Sbjct: 203 EYFYQPKGNEKVPEIVGEKKGTVVYQLDSVPIEGSYFTSSRVGGKRGIVKELAVTLQGPE 262
Query: 166 DNTLMFEARFESGNLQKVVKVAEYEYQLTVRPDLFTNKHTQWYYFQVTNMRAGIVYRFTI 225
DNTL+FE+RFESGNLQK V+V YEY+LT+R DL+TNKHTQW+YF+V N R YRFTI
Sbjct: 263 DNTLLFESRFESGNLQKAVRVDTYEYELTLRTDLYTNKHTQWFYFRVQNTRKDATYRFTI 322
Query: 226 VNFTKPASLYSRGMRPLFYSEKEAKAHHIGWQRIGDQIKYYRNNPGQDGRHYFSLTWTFQ 285
VN KP SLY+ GM+PL YS+ +A +IGW+R G++IKYY+NN + ++ LTWT Q
Sbjct: 323 VNLLKPKSLYTVGMKPLLYSQLDANTRNIGWRREGNEIKYYKNNTDDGQQPFYCLTWTIQ 382
Query: 286 FPHNKDTCYFAHCYPYTYTNLQEYLSGINNDPVRSKFCKIRVLCHTLARNMVYILTITTP 345
FP+++DTC+FAH YPYTYT+LQ YL + N+P++S+FCK++ LC +LA N VY+LTIT P
Sbjct: 383 FPYDQDTCFFAHFYPYTYTDLQCYLLSVANNPIQSQFCKLQTLCRSLAGNTVYLLTITNP 442
Query: 346 LKN-SDSRKRKAVILTARVHPGETNSSWIMKGFLDYILGNSSDAQLLRDTFVFKVVPMLN 404
+ ++ +KAV+L+ARVHPGE+N SW+MKGFLD+IL NS DAQLLRD FVFKV+PMLN
Sbjct: 443 SQTPQEAAAKKAVVLSARVHPGESNGSWVMKGFLDFILSNSPDAQLLRDIFVFKVLPMLN 502
Query: 405 PDGVIVGNYRCSLAGRDLNRNYTSLLKESFPSVWYTRNMVHRLMEKREVILYCDLHGHSR 464
PDGVIVGNYRCSLAGRDLNR+Y ++LKESFP +WYTRNM+ RL+E+REV+LYCD HGHSR
Sbjct: 503 PDGVIVGNYRCSLAGRDLNRHYKTILKESFPCIWYTRNMIKRLLEEREVLLYCDFHGHSR 562
Query: 465 KENIFMYGCDGSDRSKTLYLQQRIFPLMLSKNCPDKFSFSACKFNVQKSKEGTGRVVMWK 524
K NIF+YGC+ ++R +L +R+FPLML KN PDKFSF +C F VQK KEGTGRVVMW+
Sbjct: 563 KNNIFLYGCNNNNRK--YWLHERVFPLMLCKNAPDKFSFHSCNFKVQKCKEGTGRVVMWR 620
Query: 525 MGIRNSFTMEATFCGSTLGNKRGTHFSTKDLESMGYHFCDSLLDYCDPDRTKYYRCLKEL 584
MGI NS+TME+TF GSTLGNKR THF+ +DL+S+GYH CD+LLD+CDPD+ K+ +CL EL
Sbjct: 621 MGILNSYTMESTFGGSTLGNKRDTHFTIEDLKSLGYHVCDTLLDFCDPDQMKFTQCLAEL 680
Query: 585 EEMERHITLEKVFE-----DSDTPVIDITL-DVESSSRGSDSSESIDSLTYLL-----KL 633
+E+ R +K E D + DI+L D+ESS+ GSDSS S D L L +L
Sbjct: 681 KELLRQEIHKKFHELGQDVDLEGSWSDISLSDIESSTSGSDSSLS-DGLPVHLANIADEL 739
Query: 634 TSQKKHLKTKKERNSTIASHQNARGQEVYDRGHLLQR 670
T +KK K KK+++ +N E Y + +L+Q+
Sbjct: 740 TQKKKMFKKKKKKSLQTRKQRN----EQYQKKNLMQK 772
>gi|170763513 ATP/GTP binding protein 1 [Homo sapiens]
Length = 1186
Score = 355 bits (912), Expect = 8e-98
Identities = 186/428 (43%), Positives = 272/428 (63%), Gaps = 31/428 (7%)
Query: 169 LMFEARFESGNLQKVVKVAEYEYQLTVRPDLFTNKHTQWYYFQVTNMRAGIVYRFTIVNF 228
L F ++FESGNL+KV+++ + EY L + D+ +N + QW+YF+V+ MR G+ YRF I+N
Sbjct: 670 LKFNSKFESGNLRKVIQIRKNEYDLILNSDINSNHYHQWFYFEVSGMRPGVAYRFNIINC 729
Query: 229 TKPASLYSRGMRPLFYSEKEAKAHHIGWQRIGDQIKYYRNN--------PGQDGRHYFSL 280
K S ++ GM+PL YS +EA W R+G I YY+N+ GQ G+ Y+++
Sbjct: 730 EKSNSQFNYGMQPLMYSVQEALNARPWWIRMGTDICYYKNHFSRSSVAAGGQKGKSYYTI 789
Query: 281 TWTFQFPHNKDTCYFAHCYPYTYTNLQEYLSGINN--DPVRSKFCKIRVLCHTLARNMVY 338
T+T FPH D CYFA+ YPYTY+ LQ +L + + +P + F K VLC TL+ N
Sbjct: 790 TFTVNFPHKDDVCYFAYHYPYTYSTLQMHLQKLESAHNPQQIYFRK-DVLCETLSGNSCP 848
Query: 339 ILTITTPLKNS------DSRKRKAVILTARVHPGETNSSWIMKGFLDYILGNSSDAQLLR 392
++TIT +++ R R V L+ARVHPGETN+SW+MKG L+Y++ N+ AQ LR
Sbjct: 849 LVTITAMPESNYYEHICHFRNRPYVFLSARVHPGETNASWVMKGTLEYLMSNNPTAQSLR 908
Query: 393 DTFVFKVVPMLNPDGVIVGNYRCSLAGRDLNRNYTSLLKESFPSVWYTRNMVHRLME-KR 451
++++FK+VPMLNPDGVI GN+RCSL+G DLNR + S + P++++ + ++ L KR
Sbjct: 909 ESYIFKIVPMLNPDGVINGNHRCSLSGEDLNRQWQSPSPDLHPTIYHAKGLLQYLAAVKR 968
Query: 452 EVILYCDLHGHSRKENIFMYGCD-------GSDRSKTLYLQQ----RIFPLMLSKNCPDK 500
++YCD HGHSRK+N+FMYGC +D + + + + R P +LS P
Sbjct: 969 LPLVYCDYHGHSRKKNVFMYGCSIKETVWHTNDNATSCDVVEDTGYRTLPKILSHIAP-A 1027
Query: 501 FSFSACKFNVQKSKEGTGRVVMWK-MGIRNSFTMEATFCGSTLGNKRGTHFSTKDLESMG 559
F S+C F V+KSKE T RVV+W+ +G++ S+TME+T CG G +G T++LE MG
Sbjct: 1028 FCMSSCSFVVEKSKESTARVVVWREIGVQRSYTMESTLCGCDQGKYKGLQIGTRELEEMG 1087
Query: 560 YHFCDSLL 567
FC LL
Sbjct: 1088 AKFCVGLL 1095
>gi|120444924 ATP/GTP binding protein-like 1 [Homo sapiens]
Length = 1066
Score = 335 bits (860), Expect = 9e-92
Identities = 182/454 (40%), Positives = 269/454 (59%), Gaps = 50/454 (11%)
Query: 163 DYRDNTLMFEARFESGNLQKVVKVAEYEYQLTVRPDLFTNKHTQWYYFQVTNMRAGIVYR 222
D N L F ++FESGNL+K ++V E+EY L V D+ + +H QW+YF+V+ M+A I Y
Sbjct: 542 DNASNCLRFFSKFESGNLRKAIQVREFEYDLLVNADVNSTQHQQWFYFKVSGMQAAIPYH 601
Query: 223 FTIVNFTKPASLYSRGMRPLFYSEKEAKAHHIGWQRIGDQIKYYRNN--------PGQDG 274
F I+N KP S ++ GM+P YS KEA W R G +I YY+N+ G G
Sbjct: 602 FNIINCEKPNSQFNYGMQPTLYSVKEALLGKPTWIRTGHEICYYKNHYRQSTAVAGGASG 661
Query: 275 RHYFSLTWTFQFPHNKDTCYFAHCYPYTYTNLQEYLSGINNDP-VRSKFCKIRVLCHTLA 333
+ Y++LT+ FPH++D CY A+ YPYTYT L +L + ++ + + VLC TL
Sbjct: 662 KCYYTLTFAVTFPHSEDVCYLAYHYPYTYTALMTHLDILEKSVNLKEVYFRQDVLCQTLG 721
Query: 334 RNMVYILTITT-PLKNSDS-----RKRKAVILTARVHPGETNSSWIMKGFLDYILGNSSD 387
N ++TIT P NSD R R ++TARVHPGE+N+SW+MKG L++++ +
Sbjct: 722 GNPCPLVTITAMPESNSDEHLEQFRHRPYQVITARVHPGESNASWVMKGTLEFLVSSDPV 781
Query: 388 AQLLRDTFVFKVVPMLNPDGVIVGNYRCSLAGRDLNRNYTSLLKESFPSVWYTRNMVHRL 447
A+LLR+ F+FK++PMLNPDGVI GN+RCSL+G DLNR + S P++++ + +++ L
Sbjct: 782 ARLLRENFIFKIIPMLNPDGVINGNHRCSLSGEDLNRQWLSPSAHLQPTIYHAKGLLYHL 841
Query: 448 ME-KREVILYCDLHGHSRKENIFMYGCDGSDR---------SKTLY--LQQRIFPLMLSK 495
R +++CD HGHS+K+N+F+YGC + + T+ + R P +L K
Sbjct: 842 SSIGRSPVVFCDFHGHSQKKNVFLYGCSIKETLWQAACTVGTSTILEEVNYRTLPKILDK 901
Query: 496 NCPDKFSFSACKFNVQKSKEGTGRVVMWK-MGIRNSFTMEATFCGSTLG----------- 543
P F+ S+C F V+KS+ T RVV+W+ MG+ S+TME+++CG G
Sbjct: 902 LAP-AFTMSSCSFLVEKSRASTARVVVWREMGVSRSYTMESSYCGCNQGPYQCTQRLLER 960
Query: 544 --NKR--------GTHFSTKDLESMGYHFCDSLL 567
N+R G F T++LE MG FC LL
Sbjct: 961 TKNERAHPVDGLQGLQFGTRELEEMGAMFCLGLL 994
>gi|190194403 ATP/GTP binding protein-like 4 [Homo sapiens]
Length = 503
Score = 239 bits (611), Expect = 7e-63
Identities = 150/429 (34%), Positives = 229/429 (53%), Gaps = 22/429 (5%)
Query: 151 VGGNRTP-LKQPVDY----RDNTLMFEARFESGNLQKVVKVAEYEYQLTVRPDLFTNKHT 205
+GGN + + P Y + L+F+A FESGNL +V +V+E+EY L +RPD +
Sbjct: 21 IGGNVSKYIVLPTGYCGQPKKGHLIFDACFESGNLGRVDQVSEFEYDLFIRPDTCNPRFR 80
Query: 206 QWYYFQVTNMRAGIVYRFTIVNFTKPASLYSRGMRPLFYSEKEAKAHHIGWQRIGDQIKY 265
W+ F V N++ F IVNF+K SLY GM P+ S K WQR+ + Y
Sbjct: 81 VWFNFTVENVKESQRVIFNIVNFSKTKSLYRDGMAPMVKSTSRPK-----WQRLPPKNVY 135
Query: 266 YRNNPGQDGRHYFSLTWTFQFPHNKDTCYFAHCYPYTYTNLQEYLSGINNDPVRSKFCKI 325
Y P D R + +++ F F +D FA+CYPYTYT Q YL + + F +
Sbjct: 136 YYRCP--DHRKNYVMSFAFCFDREEDIYQFAYCYPYTYTRFQHYLDSLQKRNMDYFFRE- 192
Query: 326 RVLCHTLARNMVYILTITTPLKNSDSRKRKAVILTARVHPGETNSSWIMKGFLDYILGNS 385
L ++ + + +LTIT+P + ++K V +T RVHPGET SS++ +G +D+++
Sbjct: 193 -QLGQSVQQRKLDLLTITSPDNLREGAEQKVVFITGRVHPGETPSSFVCQGIIDFLVSQH 251
Query: 386 SDAQLLRDTFVFKVVPMLNPDGVIVGNYRCSLAGRDLNRNYTSLLKESFPSVWYTRNMVH 445
A +LR+ VFK+ PMLNPDGV +GNYRCSL G DLNR++ P++ + ++
Sbjct: 252 PIACVLREYLVFKIAPMLNPDGVYLGNYRCSLMGFDLNRHWLDPSPWVHPTLHGVKQLIV 311
Query: 446 RLME--KREVILYCDLHGHSRKENIFMYGCDGSDRSKTLYLQQRIFPLMLSKNCPDKFSF 503
++ K + Y D+H HS N FMYG D + + +Q IFP +L +N D FS+
Sbjct: 312 QMYNDPKTSLEFYIDIHAHSTMMNGFMYGNIFEDEER--FQRQAIFPKLLCQNAED-FSY 368
Query: 504 SACKFNVQKSKEGTGRVVMWKMGIRNS--FTMEATFCGSTL-GNKRGTHFSTKDLESMGY 560
S+ FN K GTGR + + S +T+E +F + G ++ + +G
Sbjct: 369 SSTSFNRDAVKAGTGRRFLGGLLDHTSYCYTLEVSFYSYIISGTTAAVPYTEEAYMKLGR 428
Query: 561 HFCDSLLDY 569
+ + LDY
Sbjct: 429 NVARTFLDY 437
>gi|118421091 ATP/GTP binding protein-like 5 isoform 1 [Homo
sapiens]
Length = 886
Score = 141 bits (356), Expect = 2e-33
Identities = 100/325 (30%), Positives = 155/325 (47%), Gaps = 70/325 (21%)
Query: 162 VDYRDNTLMFEARFESGNLQKVVKVA------------------------EYEYQLTVRP 197
++ R L+F +RF+SGNL V KV +YE+ + RP
Sbjct: 1 MELRCGGLLFSSRFDSGNLAHVEKVESLSSDGEGVGGGASALTSGIASSPDYEFNVWTRP 60
Query: 198 DL----FTNKHTQWYYFQVTNMRAGIVYRFTIVNFTKPASLYSRGMRPLFYSEKEAKAHH 253
D F N + W+YF V G + + I+N K + LYS+GM P +
Sbjct: 61 DCAETEFENGNRSWFYFSVRGGMPGKLIKINIMNMNKQSKLYSQGMAPFVRTLPTRPR-- 118
Query: 254 IGWQRIGDQIKYYRNNPGQDGRHYFSLTWTFQFPHNKD-TCYFAHCYPYTYTNLQEYLSG 312
W+RI D+ + F L++ +F + T +FA CYP++Y++ QE L+
Sbjct: 119 --WERIRDRPTFEMTET------QFVLSFVHRFVEGRGATTFFAFCYPFSYSDCQELLNQ 170
Query: 313 IN----------NDPVRSKFCKIRVLCHTLARNMVYILTITTPLKNSDSRK--------- 353
++ + P+ + + +LC++L V +LTIT+ + R+
Sbjct: 171 LDQRFPENHPTHSSPLDTIYYHRELLCYSLDGLRVDLLTITSCHGLREDREPRLEQLFPD 230
Query: 354 -----------RKAVILTARVHPGETNSSWIMKGFLDYILG-NSSDAQLLRDTFVFKVVP 401
++ L++RVHPGET SS++ GFLD+IL + AQ LR FVFK++P
Sbjct: 231 TSTPRPFRFAGKRIFFLSSRVHPGETPSSFVFNGFLDFILRPDDPRAQTLRRLFVFKLIP 290
Query: 402 MLNPDGVIVGNYRCSLAGRDLNRNY 426
MLNPDGV+ G+YR G +LNR Y
Sbjct: 291 MLNPDGVVRGHYRTDSRGVNLNRQY 315
Score = 57.8 bits (138), Expect = 5e-08
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 14/96 (14%)
Query: 453 VILYCDLHGHSRKENIFMYGCDGSDRSKTLYLQQRIFPLMLSKNCPDKFSFSACKFNVQ- 511
V Y DLHGH+ K FMYG SD S ++ ++P ++S N F F C F+ +
Sbjct: 427 VAYYVDLHGHASKRGCFMYGNSFSDES--TQVENMLYPKLISLNSA-HFDFQGCNFSEKN 483
Query: 512 ---------KSKEGTGRVVMWK-MGIRNSFTMEATF 537
+SKEG+GRV ++K GI +S+T+E +
Sbjct: 484 MYARDRRDGQSKEGSGRVAIYKASGIIHSYTLECNY 519
>gi|78482633 ATP/GTP binding protein-like 5 isoform 3 [Homo sapiens]
Length = 717
Score = 141 bits (356), Expect = 2e-33
Identities = 100/325 (30%), Positives = 155/325 (47%), Gaps = 70/325 (21%)
Query: 162 VDYRDNTLMFEARFESGNLQKVVKVA------------------------EYEYQLTVRP 197
++ R L+F +RF+SGNL V KV +YE+ + RP
Sbjct: 1 MELRCGGLLFSSRFDSGNLAHVEKVESLSSDGEGVGGGASALTSGIASSPDYEFNVWTRP 60
Query: 198 DL----FTNKHTQWYYFQVTNMRAGIVYRFTIVNFTKPASLYSRGMRPLFYSEKEAKAHH 253
D F N + W+YF V G + + I+N K + LYS+GM P +
Sbjct: 61 DCAETEFENGNRSWFYFSVRGGMPGKLIKINIMNMNKQSKLYSQGMAPFVRTLPTRPR-- 118
Query: 254 IGWQRIGDQIKYYRNNPGQDGRHYFSLTWTFQFPHNKD-TCYFAHCYPYTYTNLQEYLSG 312
W+RI D+ + F L++ +F + T +FA CYP++Y++ QE L+
Sbjct: 119 --WERIRDRPTFEMTET------QFVLSFVHRFVEGRGATTFFAFCYPFSYSDCQELLNQ 170
Query: 313 IN----------NDPVRSKFCKIRVLCHTLARNMVYILTITTPLKNSDSRK--------- 353
++ + P+ + + +LC++L V +LTIT+ + R+
Sbjct: 171 LDQRFPENHPTHSSPLDTIYYHRELLCYSLDGLRVDLLTITSCHGLREDREPRLEQLFPD 230
Query: 354 -----------RKAVILTARVHPGETNSSWIMKGFLDYILG-NSSDAQLLRDTFVFKVVP 401
++ L++RVHPGET SS++ GFLD+IL + AQ LR FVFK++P
Sbjct: 231 TSTPRPFRFAGKRIFFLSSRVHPGETPSSFVFNGFLDFILRPDDPRAQTLRRLFVFKLIP 290
Query: 402 MLNPDGVIVGNYRCSLAGRDLNRNY 426
MLNPDGV+ G+YR G +LNR Y
Sbjct: 291 MLNPDGVVRGHYRTDSRGVNLNRQY 315
Score = 57.8 bits (138), Expect = 5e-08
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 14/96 (14%)
Query: 453 VILYCDLHGHSRKENIFMYGCDGSDRSKTLYLQQRIFPLMLSKNCPDKFSFSACKFNVQ- 511
V Y DLHGH+ K FMYG SD S ++ ++P ++S N F F C F+ +
Sbjct: 427 VAYYVDLHGHASKRGCFMYGNSFSDES--TQVENMLYPKLISLNSA-HFDFQGCNFSEKN 483
Query: 512 ---------KSKEGTGRVVMWK-MGIRNSFTMEATF 537
+SKEG+GRV ++K GI +S+T+E +
Sbjct: 484 MYARDRRDGQSKEGSGRVAIYKASGIIHSYTLECNY 519
>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
Length = 4377
Score = 37.4 bits (85), Expect = 0.065
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 764 TQIKQLFNPRT---NFQIQHQLNPATCRNIKKYSTSWTAPRNHPFVIQGDVMANSSEWVQ 820
T++ Q F +T N ++Q A +N K+YS+ + V+ +++A++ EWV+
Sbjct: 2589 TEVSQFFRDKTEKLNDELQSPEKKARPKNGKEYSSQSPTSSSPEKVLLTELLASNDEWVK 2648
Query: 821 SKPH-------RSLESLSPL--KGPKKNKHSQIWAIKNEDIKPLSSKWETASSSFGMDAN 871
++ H E +P P+K SQ + ED K + S S D
Sbjct: 2649 ARQHGPDGQGFPKAEEKAPSLPSSPEKMVLSQ----QTEDSKSTVEAKGSISQSKAPDGP 2704
Query: 872 VLKYKSLQAEETNQQSSKHTALHL-TKNKDEQANKNDGQPTLYLKFQRES 920
++ Q++ ++ + H +K+ ++ K+DGQ + +K +ES
Sbjct: 2705 QSGFQLKQSKLSSIRLKFEQGTHAKSKDMSQEDRKSDGQSRIPVKKIQES 2754
>gi|121114302 cullin 4B isoform 2 [Homo sapiens]
Length = 895
Score = 33.1 bits (74), Expect = 1.2
Identities = 40/170 (23%), Positives = 66/170 (38%), Gaps = 27/170 (15%)
Query: 568 DYCDPDRTKYYRCLKELEEMERHITLEKVFEDSDTPVI---DITLDVESSSRGSDSSESI 624
D P + + CL H+ ++K DT D + ESSS S SS +
Sbjct: 74 DSASPSTSSF--CLGVSVAASSHVPIQKKLRFEDTLEFVGFDAKMAEESSSSSSSSSPTA 131
Query: 625 DSLTYLLKLTSQKKHLKTKKERNSTIASHQNARGQEVYDRGHLLQRHTQSNSDVKDTRPN 684
TSQ++ LK K S++AS +A G L + + + S +++P
Sbjct: 132 --------ATSQQQQLKNKSILISSVASVHHANG---------LAKSSTTVSSFANSKPG 174
Query: 685 EPDDYMVDYF--RRQLPNQGLDLHHNLKSKIKECISFQSKKTGINWTDDE 732
++ F + +LP D K+KE + T I + +E
Sbjct: 175 SAKKLVIKNFKDKPKLPENYTD---ETWQKLKEAVEAIQNSTSIKYNLEE 221
>gi|121114298 cullin 4B isoform 1 [Homo sapiens]
Length = 913
Score = 33.1 bits (74), Expect = 1.2
Identities = 40/170 (23%), Positives = 66/170 (38%), Gaps = 27/170 (15%)
Query: 568 DYCDPDRTKYYRCLKELEEMERHITLEKVFEDSDTPVI---DITLDVESSSRGSDSSESI 624
D P + + CL H+ ++K DT D + ESSS S SS +
Sbjct: 92 DSASPSTSSF--CLGVSVAASSHVPIQKKLRFEDTLEFVGFDAKMAEESSSSSSSSSPTA 149
Query: 625 DSLTYLLKLTSQKKHLKTKKERNSTIASHQNARGQEVYDRGHLLQRHTQSNSDVKDTRPN 684
TSQ++ LK K S++AS +A G L + + + S +++P
Sbjct: 150 --------ATSQQQQLKNKSILISSVASVHHANG---------LAKSSTTVSSFANSKPG 192
Query: 685 EPDDYMVDYF--RRQLPNQGLDLHHNLKSKIKECISFQSKKTGINWTDDE 732
++ F + +LP D K+KE + T I + +E
Sbjct: 193 SAKKLVIKNFKDKPKLPENYTD---ETWQKLKEAVEAIQNSTSIKYNLEE 239
>gi|55749769 CWC22 spliceosome-associated protein homolog [Homo
sapiens]
Length = 908
Score = 33.1 bits (74), Expect = 1.2
Identities = 32/157 (20%), Positives = 60/157 (38%), Gaps = 7/157 (4%)
Query: 585 EEMERHITLEKVFEDSDTPVIDITLDVESSSRGSDSSESIDSLTYLLKLTSQKKHLKTKK 644
+E+ H+ + P ++ SSS + SS DS + +++
Sbjct: 641 DELREHLKNTPKVIVAQKPDVEQNKSSPSSSSSASSSSESDSSDSDSDSSDSSSESSSEE 700
Query: 645 ERNSTIASHQNARGQEVYDRGHLLQRHTQSNSDVKDTRPNEPDDYMVDYFRRQLPNQGLD 704
+S+I+SH +A +V +GH T+S K R + +D R++ +Q
Sbjct: 701 SDSSSISSHSSASANDVRKKGH---GKTRSKEVDKLIRNQQTNDRKQKERRQEHGHQETR 757
Query: 705 LHHNLKSKIKECISFQSKKTGINWTDDEKRSYKDKGI 741
+S+ +G NW D + DK +
Sbjct: 758 TERERRSEKHR----DQNSSGSNWRDPITKYTSDKDV 790
>gi|4885583 Rho-associated, coiled-coil containing protein kinase 1
[Homo sapiens]
Length = 1354
Score = 32.7 bits (73), Expect = 1.6
Identities = 50/226 (22%), Positives = 84/226 (37%), Gaps = 23/226 (10%)
Query: 582 KELEEMERHITLEKVFEDSDTPVIDITLDVESSSRGSDSSESIDSLTYLLKLTSQKKHLK 641
+EL+E R + K D D + L+ E RG DS D + L + KHLK
Sbjct: 583 RELQERNRILENSKSQTDKDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLK 642
Query: 642 TKKER------------NSTIASHQNARGQEVYDRGHLLQRHTQSNSDVKDTRPNEPDDY 689
E+ N + N Y L QR Q ++ K T+ D +
Sbjct: 643 HNLEKVEGERKEAQDMLNHSEKEKNNLEIDLNYKLKSLQQRLEQEVNEHKVTKARLTDKH 702
Query: 690 MVDYFRRQLPNQGLDLHHNLKSKIKECISFQSKKTGINWTDDEKRSYKDKGIVQTQEILQ 749
+ + ++ K+KE + K +++ S D + Q+Q+ L+
Sbjct: 703 ------QSIEEAKSVAMCEMEKKLKEEREAREKAENRVVQIEKQCSMLDVDLKQSQQKLE 756
Query: 750 YLL----PIVHSTKNMQTTQIKQLFNPRTNFQIQHQLNPATCRNIK 791
+L + KN+ T Q++Q N R Q + + N+K
Sbjct: 757 HLTGNKERMEDEVKNL-TLQLEQESNKRLLLQNELKTQAFEADNLK 801
>gi|52317130 olfactory receptor, family 5, subfamily L, member 2
[Homo sapiens]
Length = 311
Score = 32.7 bits (73), Expect = 1.6
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Query: 338 YILTITTPLKNSDSRKRKAVILTARVHPGETNSSWIMKGFLDYIL-----GNSSDAQLLR 392
Y+L +TT LK + R T H + + G + YI GNS D +
Sbjct: 218 YLLILTTILKIHSAESRHKAFSTCASH---LTAITVSHGTILYIYCRPSSGNSGDVDKVA 274
Query: 393 DTFVFKVVPMLNP 405
F V+PMLNP
Sbjct: 275 TVFYTVVIPMLNP 287
>gi|116295256 heparan sulfate 6-O-sulfotransferase 2 isoform L [Homo
sapiens]
Length = 645
Score = 32.3 bits (72), Expect = 2.1
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 11/116 (9%)
Query: 608 TLDVESSSRGSDSSESIDSLTYL-LKLTSQKKHLKTKKERNSTIASHQNARG----QEVY 662
T S + + I+ L +L ++L S K L ++ + HQ AR Q +
Sbjct: 501 TTRASSVEINEEIQKRIEGLNFLDMELYSYAKDLFLQRYQFMRQKEHQEARRKRQEQRKF 560
Query: 663 DRGHLLQRHTQSNSDVKDTRPNEPDDYMVDYFRRQLPNQGLDLHHNLKSKIKECIS 718
+G LLQ H QS + PN+ + + PN +L NL + + +S
Sbjct: 561 LKGRLLQTHFQSQGQGQSQNPNQ------NQSQNPNPNANQNLTQNLMQNLTQSLS 610
>gi|116295254 heparan sulfate 6-O-sulfotransferase 2 isoform S [Homo
sapiens]
Length = 605
Score = 32.3 bits (72), Expect = 2.1
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 11/116 (9%)
Query: 608 TLDVESSSRGSDSSESIDSLTYL-LKLTSQKKHLKTKKERNSTIASHQNARG----QEVY 662
T S + + I+ L +L ++L S K L ++ + HQ AR Q +
Sbjct: 461 TTRASSVEINEEIQKRIEGLNFLDMELYSYAKDLFLQRYQFMRQKEHQEARRKRQEQRKF 520
Query: 663 DRGHLLQRHTQSNSDVKDTRPNEPDDYMVDYFRRQLPNQGLDLHHNLKSKIKECIS 718
+G LLQ H QS + PN+ + + PN +L NL + + +S
Sbjct: 521 LKGRLLQTHFQSQGQGQSQNPNQ------NQSQNPNPNANQNLTQNLMQNLTQSLS 570
>gi|169169045 PREDICTED: similar to glutathione S-transferase alpha
3 [Homo sapiens]
Length = 227
Score = 32.0 bits (71), Expect = 2.7
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 24/101 (23%)
Query: 382 LGNSSDAQLLR--DTFVFKVVPMLNPDGV------IVGNY---RCSLAGRDLNRNYTSLL 430
L ++ D + LR ++F+F+ VPM+ DG+ + NY + +L G+D +
Sbjct: 24 LESAKDLEKLRNDESFMFQQVPMVEIDGMKLVQTRAILNYIVSKYNLCGKD--------I 75
Query: 431 KESFPSVW-YTRNMVHRLMEKR----EVILYCDLHGHSRKE 466
KE P +W + V +E R E +L+C LH K+
Sbjct: 76 KERAPYIWLFLSYRVDMYIEGRAGLSEKLLHCSLHPPEEKD 116
>gi|113418092 PREDICTED: similar to glutathione S-transferase alpha
3 [Homo sapiens]
Length = 216
Score = 32.0 bits (71), Expect = 2.7
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 24/101 (23%)
Query: 382 LGNSSDAQLLR--DTFVFKVVPMLNPDGV------IVGNY---RCSLAGRDLNRNYTSLL 430
L ++ D + LR ++F+F+ VPM+ DG+ + NY + +L G+D +
Sbjct: 13 LESAKDLEKLRNDESFMFQQVPMVEIDGMKLVQTRAILNYIVSKYNLCGKD--------I 64
Query: 431 KESFPSVW-YTRNMVHRLMEKR----EVILYCDLHGHSRKE 466
KE P +W + V +E R E +L+C LH K+
Sbjct: 65 KERAPYIWLFLSYRVDMYIEGRAGLSEKLLHCSLHPPEEKD 105
>gi|113417526 PREDICTED: similar to glutathione S-transferase alpha
3 [Homo sapiens]
Length = 216
Score = 32.0 bits (71), Expect = 2.7
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 24/101 (23%)
Query: 382 LGNSSDAQLLR--DTFVFKVVPMLNPDGV------IVGNY---RCSLAGRDLNRNYTSLL 430
L ++ D + LR ++F+F+ VPM+ DG+ + NY + +L G+D +
Sbjct: 13 LESAKDLEKLRNDESFMFQQVPMVEIDGMKLVQTRAILNYIASKYNLCGKD--------I 64
Query: 431 KESFPSVW-YTRNMVHRLMEKR----EVILYCDLHGHSRKE 466
KE P +W + V +E R E +L+C LH K+
Sbjct: 65 KERAPYIWLFLSYRVDMYIEGRAGLSEKLLHCSLHPPEEKD 105
>gi|42542403 CGI-01 protein isoform 1 [Homo sapiens]
Length = 699
Score = 31.6 bits (70), Expect = 3.5
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 391 LRDTFVFKVVPMLNPDGVIVGNYRCSLAGRDLNRNYTSLLKESFPSVWYTRNMVHRLMEK 450
+ +F+ KV +L P+GV + N C G L + + LK FP ++ V R+ +
Sbjct: 593 VEQSFLQKVKSILTPEGVFILNLVCRDLG--LKDSVLAGLKAVFPLLY-----VRRIEGE 645
Query: 451 REVILYCDLH 460
IL+C LH
Sbjct: 646 VNEILFCQLH 655
>gi|42542405 CGI-01 protein isoform 2 [Homo sapiens]
Length = 613
Score = 31.6 bits (70), Expect = 3.5
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 391 LRDTFVFKVVPMLNPDGVIVGNYRCSLAGRDLNRNYTSLLKESFPSVWYTRNMVHRLMEK 450
+ +F+ KV +L P+GV + N C G L + + LK FP ++ V R+ +
Sbjct: 507 VEQSFLQKVKSILTPEGVFILNLVCRDLG--LKDSVLAGLKAVFPLLY-----VRRIEGE 559
Query: 451 REVILYCDLH 460
IL+C LH
Sbjct: 560 VNEILFCQLH 569
>gi|55956895 CGI-01 protein isoform 3 [Homo sapiens]
Length = 543
Score = 31.6 bits (70), Expect = 3.5
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 391 LRDTFVFKVVPMLNPDGVIVGNYRCSLAGRDLNRNYTSLLKESFPSVWYTRNMVHRLMEK 450
+ +F+ KV +L P+GV + N C G L + + LK FP ++ V R+ +
Sbjct: 437 VEQSFLQKVKSILTPEGVFILNLVCRDLG--LKDSVLAGLKAVFPLLY-----VRRIEGE 489
Query: 451 REVILYCDLH 460
IL+C LH
Sbjct: 490 VNEILFCQLH 499
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 31.6 bits (70), Expect = 3.5
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 570 CDPDRTKYYRCLKELE-EMERHITLEKVFEDSDTPVIDITLDVESSSRGSDSSES-IDSL 627
C +T+ + L++L + I+ + P +D TL+ S S +S ID
Sbjct: 2682 CSTQQTQQKKYLEQLHLPQSKPISPNFKVKTIKLPTLDHTLNETDHSYESHKQQSEIDVQ 2741
Query: 628 TYLLKLTSQKKHLKTKKERNSTIASHQNARGQEVY 662
T+ ++K++LKTKK ST SH+ + + Y
Sbjct: 2742 TF-----TKKQYLKTKKTEASTECSHKQSLAERHY 2771
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 31.2 bits (69), Expect = 4.6
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 607 ITLDVESSSRGSDSSESIDSLTYLLKLTSQKKHLKTKKERNSTIASHQNARGQEVYDRGH 666
I D+ SS R S S+ S S + T +K K K+E +S + S++ R + D
Sbjct: 48 INEDIRSSGRNSPSAASTSSNDSKAE-TVKKSAKKVKEEASSPLKSNKRQREKVASDTEE 106
Query: 667 LLQRHTQSNSDVKDTRPNEPDD 688
+ ++ + +RPN P +
Sbjct: 107 ADRTSSKKTKTQEISRPNSPSE 128
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 31.2 bits (69), Expect = 4.6
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 607 ITLDVESSSRGSDSSESIDSLTYLLKLTSQKKHLKTKKERNSTIASHQNARGQEVYDRGH 666
I D+ SS R S S+ S S + T +K K K+E +S + S++ R + D
Sbjct: 602 INEDIRSSGRNSPSAASTSSNDSKAE-TVKKSAKKVKEEASSPLKSNKRQREKVASDTEE 660
Query: 667 LLQRHTQSNSDVKDTRPNEPDD 688
+ ++ + +RPN P +
Sbjct: 661 ADRTSSKKTKTQEISRPNSPSE 682
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 31.2 bits (69), Expect = 4.6
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 607 ITLDVESSSRGSDSSESIDSLTYLLKLTSQKKHLKTKKERNSTIASHQNARGQEVYDRGH 666
I D+ SS R S S+ S S + T +K K K+E +S + S++ R + D
Sbjct: 602 INEDIRSSGRNSPSAASTSSNDSKAE-TVKKSAKKVKEEASSPLKSNKRQREKVASDTEE 660
Query: 667 LLQRHTQSNSDVKDTRPNEPDD 688
+ ++ + +RPN P +
Sbjct: 661 ADRTSSKKTKTQEISRPNSPSE 682
>gi|42718011 cyclic nucleotide gated channel alpha 2 [Homo sapiens]
Length = 664
Score = 31.2 bits (69), Expect = 4.6
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 35/156 (22%)
Query: 539 GSTLGNKRGTHFSTKDLESMGYH--FCDSLLDYCDPDRTKYYRCLKELEEMERHITLEKV 596
GS +GN+R T ++ S+GY FC S D + T+Y K LEE R I +++
Sbjct: 529 GSKMGNRR-----TANIRSLGYSDLFCLSKDDLMEAV-TEYPDAKKVLEERGREILMKEG 582
Query: 597 FEDSDTPVIDITLDVESSSRGSDSSESIDSLTYLLKLTSQKKHLKTKKERNSTIASHQNA 656
D + + +DV+ KL + +++T R + +
Sbjct: 583 LLDENEVATSMEVDVQE------------------KLGQLETNMETLYTRFGRLLAEYTG 624
Query: 657 RGQEVYDRGHLLQRHTQSNSDVKDTRPNEPDDYMVD 692
Q++ R +L+ + N++ DDY+ D
Sbjct: 625 AQQKLKQRITVLETKMKQNNE---------DDYLSD 651
>gi|155030242 WD repeat domain 60 [Homo sapiens]
Length = 1066
Score = 30.8 bits (68), Expect = 6.0
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 636 QKKHLKTKKERNSTIASHQNARGQEVYDRGHLLQRHTQSNSDVKDTRPNEPDD 688
++K + +KE +H N GQE DR LL+R + V R E D+
Sbjct: 123 KEKDRRARKEELRQTVAHHNLLGQETRDR-QLLERAERKGRSVSKVRSEEKDE 174
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 30.8 bits (68), Expect = 6.0
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 789 NIKKYSTSWTAPRNHPFVIQGDVMANSSEWVQSKPHRSLESLSPLKGPKKNKHSQIWAIK 848
NI KY + P DV S E +Q + S S S KG K++ + +
Sbjct: 1324 NIVKYPEKESEPSEKIQKFTKDV---SHEIIQHEVKSSKNSASSEKGKTKDRDYSVLEKE 1380
Query: 849 NEDIKPLSSKWETASSSFGMDANVLKYKSL-QAEETNQQSSKHTALHLTKNKDEQANKN 906
N + + S++ E S+ ++ +KSL Q+ + + S KH + + NKD N++
Sbjct: 1381 NPEKRKNSTQPEKESNLDRLNEQG-NFKSLSQSSKEARTSDKHDSTRASSNKDFTPNRD 1438
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 30.8 bits (68), Expect = 6.0
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 789 NIKKYSTSWTAPRNHPFVIQGDVMANSSEWVQSKPHRSLESLSPLKGPKKNKHSQIWAIK 848
NI KY + P DV S E +Q + S S S KG K++ + +
Sbjct: 1358 NIVKYPEKESEPSEKIQKFTKDV---SHEIIQHEVKSSKNSASSEKGKTKDRDYSVLEKE 1414
Query: 849 NEDIKPLSSKWETASSSFGMDANVLKYKSL-QAEETNQQSSKHTALHLTKNKDEQANKN 906
N + + S++ E S+ ++ +KSL Q+ + + S KH + + NKD N++
Sbjct: 1415 NPEKRKNSTQPEKESNLDRLNEQG-NFKSLSQSSKEARTSDKHDSTRASSNKDFTPNRD 1472
>gi|51173730 Sma- and Mad-related protein 2 isoform 1 [Homo sapiens]
Length = 467
Score = 30.4 bits (67), Expect = 7.9
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 84 LSPTRWPYHCEVIDEKVQHIDWTPSCPEPVYIPTGLETEPLY-PDSKEATVVYLAED 139
L P P H E++ E D+T S PE P G+E + Y P++ Y++ED
Sbjct: 175 LPPVLVPRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPG--YISED 229
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,460,403
Number of Sequences: 37866
Number of extensions: 1699309
Number of successful extensions: 5017
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 4967
Number of HSP's gapped (non-prelim): 45
length of query: 920
length of database: 18,247,518
effective HSP length: 112
effective length of query: 808
effective length of database: 14,006,526
effective search space: 11317273008
effective search space used: 11317273008
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.