Guide to the Human Genome
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Name: AGTPBP1 Sequence: fasta or formatted (1186aa) NCBI GI: 170763513
Description:

ATP/GTP binding protein 1

Referenced in:

Carboxypeptidases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         53           2
 C cysteine            1.9         23           2
 D aspartate           6.2         73           2
 E glutamate           7.2         85           2
 F phenylalanine       3.0         35           1
 G glycine             5.4         64           3
 H histidine           2.5         30           1
 I isoleucine          5.8         69           2
 K lysine              6.5         77           2
 L leucine             9.9        117           2
 M methionine          2.2         26           1
 N asparagine          6.0         71           2
 P proline             5.1         61           3
 Q glutamine           4.0         47           3
 R arginine            4.5         53           2
 S serine              8.0         95           2
 T threonine           5.6         67           2
 V valine              7.0         83           3
 W tryptophan          0.7          8           2
 Y tyrosine            4.1         49           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP/GTP binding protein 1 
AGBL1                 0.289   ATP/GTP binding protein-like 1 
AGBL3                 0.139   carboxypeptidase 3, cytosolic 
AGBL2                 0.130   carboxypeptidase 2, cytosolic 
AGBL4                 0.077   ATP/GTP binding protein-like 4 
AGBL5                 0.052   ATP/GTP binding protein-like 5 isoform 1 
AGBL5                 0.052   ATP/GTP binding protein-like 5 isoform 3 
ZBTB7C                0.005   zinc finger and BTB domain containing 7C 
BAZ2B                 0.005   bromodomain adjacent to zinc finger domain, 2B [Homo...
UPF2                  0.004   UPF2 regulator of nonsense transcripts homolog [Homo...
UPF2                  0.004   UPF2 regulator of nonsense transcripts homolog [Homo...
UBLCP1                0.004   ubiquitin-like domain containing CTD phosphatase 1 ...
NRD1                  0.004   nardilysin isoform b 
NRD1                  0.004   nardilysin isoform a 
CEBPZ                 0.003   CCAAT/enhancer binding protein zeta 
ZNF638                0.003   zinc finger protein 638 
ZNF638                0.003   zinc finger protein 638 
KIF21A                0.003   kinesin family member 21A 
ARID4B                0.003   AT rich interactive domain 4B isoform 1 
LOC100287665          0.003   PREDICTED: hypothetical protein XP_002342862 
COL12A1               0.003   collagen, type XII, alpha 1 long isoform precursor [...
C12orf70              0.003   hypothetical protein LOC341346 
LOC646817             0.003   PREDICTED: similar to SET translocation 
LOC646817             0.003   PREDICTED: similar to SET translocation 
LOC646817             0.003   PREDICTED: similar to SET translocation 
CPA4                  0.003   carboxypeptidase A4 preproprotein 
C4orf8                0.003   hypothetical protein LOC8603 
HAP1                  0.003   huntingtin-associated protein 1 isoform 4 
HAP1                  0.003   huntingtin-associated protein 1 isoform 3 
HAP1                  0.003   huntingtin-associated protein 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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