Guide to the Human Genome
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Name: METTL13 Sequence: fasta or formatted (543aa) NCBI GI: 55956895
Description:

CGI-01 protein isoform 3

Referenced in:

Peptide-processing Enzymes

Other entries for this name:
alt prot [699aa] CGI-01 protein isoform 1
alt prot [613aa] CGI-01 protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         35           2
 C cysteine            2.0         11           2
 D aspartate           7.0         38           2
 E glutamate           7.0         38           3
 F phenylalanine       4.1         22           2
 G glycine             7.0         38           3
 H histidine           2.0         11           2
 I isoleucine          4.4         24           1
 K lysine              6.4         35           2
 L leucine            11.8         64           3
 M methionine          3.1         17           1
 N asparagine          1.7          9           1
 P proline             4.8         26           3
 Q glutamine           5.7         31           3
 R arginine            5.9         32           2
 S serine              5.7         31           2
 T threonine           3.3         18           1
 V valine              8.1         44           2
 W tryptophan          0.9          5           1
 Y tyrosine            2.6         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CGI-01 protein isoform 3 
METTL13               0.718   CGI-01 protein isoform 1 
METTL13               0.718   CGI-01 protein isoform 2 
ECE2                  0.079   endothelin converting enzyme 2 isoform C 
ECE2                  0.077   endothelin converting enzyme 2 isoform A 
SRM                   0.021   spermidine synthase 
METTL12               0.021   methyltransferase like 12 
METTL10               0.011   methyltransferase like 10 
C1orf35               0.008   hypothetical protein LOC79169 
ARL6IP4               0.008   SRp25 nuclear protein isoform 4 
ARL6IP4               0.008   SRp25 nuclear protein isoform 3 
ARL6IP4               0.008   SRp25 nuclear protein isoform 2 
ARL6IP4               0.008   SRp25 nuclear protein isoform 1 
AGBL3                 0.007   carboxypeptidase 3, cytosolic 
MLLT4                 0.006   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.006   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.006   myeloid/lymphoid or mixed-lineage leukemia (trithora...
AGBL2                 0.006   carboxypeptidase 2, cytosolic 
FRG1                  0.005   FSHD region gene 1 
KIF27                 0.005   kinesin family member 27 
BIRC6                 0.005   baculoviral IAP repeat-containing 6 
LOC126075             0.004   coiled-coil domain-containing-like 
SDCCAG1               0.004   serologically defined colon cancer antigen 1 
PPFIA2                0.004   PTPRF interacting protein alpha 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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