Guide to the Human Genome
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Search of human proteins with 222136607

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|222136607 tetratricopeptide repeat domain 26 isoform 3 [Homo
sapiens]
         (523 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|222136607 tetratricopeptide repeat domain 26 isoform 3 [Homo ...  1051   0.0  
gi|222136634 tetratricopeptide repeat domain 26 isoform 1 [Homo ...  1035   0.0  
gi|222136605 tetratricopeptide repeat domain 26 isoform 2 [Homo ...   870   0.0  
gi|31621305 leucine-rich PPR motif-containing protein [Homo sapi...    34   0.29 
gi|31317299 inhibitor of DNA binding 1 isoform a [Homo sapiens]        33   0.64 
gi|31317297 inhibitor of DNA binding 1 isoform b [Homo sapiens]        33   0.64 
gi|25952122 Bardet-Biedl syndrome 4 [Homo sapiens]                     33   0.64 
gi|225545550 TEL2, telomere maintenance 2, homolog [Homo sapiens]      32   1.1  
gi|60685231 tetratricopeptide repeat domain 7B [Homo sapiens]          32   1.1  
gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...    32   1.4  
gi|4505245 mannose receptor C type 1 precursor [Homo sapiens]          32   1.8  
gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]        32   1.8  
gi|57546917 mannose receptor, C type 1-like 1 [Homo sapiens]           32   1.8  
gi|116089292 tetratricopeptide repeat domain 21B [Homo sapiens]        32   1.8  
gi|53759120 tetratricopeptide repeat domain 8 isoform A [Homo sa...    31   3.2  
gi|38146012 tetratricopeptide repeat domain 8 isoform B [Homo sa...    31   3.2  
gi|27262638 sperm associated antigen 1 [Homo sapiens]                  30   4.1  
gi|27262636 sperm associated antigen 1 [Homo sapiens]                  30   4.1  
gi|11559925 X-prolyl aminopeptidase (aminopeptidase P) 3, putati...    30   5.4  
gi|190358539 mitochondrial glycerol 3-phosphate acyltransferase ...    30   7.0  
gi|38146008 tetratricopeptide repeat domain 8 isoform C [Homo sa...    30   7.0  
gi|22749211 transmembrane and tetratricopeptide repeat containin...    30   7.0  
gi|25777612 proteasome 26S non-ATPase subunit 3 [Homo sapiens]         30   7.0  
gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]       29   9.2  

>gi|222136607 tetratricopeptide repeat domain 26 isoform 3 [Homo
           sapiens]
          Length = 523

 Score = 1051 bits (2718), Expect = 0.0
 Identities = 523/523 (100%), Positives = 523/523 (100%)

Query: 1   MMLSRAKPAVGRGVQHTDKRKKKGRKIPKLEELLSKRDFTGAITLLEEYENATKEENCNS 60
           MMLSRAKPAVGRGVQHTDKRKKKGRKIPKLEELLSKRDFTGAITLLEEYENATKEENCNS
Sbjct: 1   MMLSRAKPAVGRGVQHTDKRKKKGRKIPKLEELLSKRDFTGAITLLEEYENATKEENCNS 60

Query: 61  EVWVNLACTYFFLGMYKQAEAAGFKASKSRLQNRLLFHLAHKFNDEKKLMSFHQNLQDVT 120
           EVWVNLACTYFFLGMYKQAEAAGFKASKSRLQNRLLFHLAHKFNDEKKLMSFHQNLQDVT
Sbjct: 61  EVWVNLACTYFFLGMYKQAEAAGFKASKSRLQNRLLFHLAHKFNDEKKLMSFHQNLQDVT 120

Query: 121 EDQLSLASIHYMRSHYQEAIDIYKRILLDNREYLALNVYVALCYYKLDYYDVSQEVLAVY 180
           EDQLSLASIHYMRSHYQEAIDIYKRILLDNREYLALNVYVALCYYKLDYYDVSQEVLAVY
Sbjct: 121 EDQLSLASIHYMRSHYQEAIDIYKRILLDNREYLALNVYVALCYYKLDYYDVSQEVLAVY 180

Query: 181 LQQIPDSTIALNLKACNHFRLYNGRAAEAELKSLMDNASSSFEFAKELIRHNLVVFRGGE 240
           LQQIPDSTIALNLKACNHFRLYNGRAAEAELKSLMDNASSSFEFAKELIRHNLVVFRGGE
Sbjct: 181 LQQIPDSTIALNLKACNHFRLYNGRAAEAELKSLMDNASSSFEFAKELIRHNLVVFRGGE 240

Query: 241 GALQVLPPLVDVIPEARLNLVIYYLRQDDVQEAYNLIKDLEPTTPQEYILKGVVNAALGQ 300
           GALQVLPPLVDVIPEARLNLVIYYLRQDDVQEAYNLIKDLEPTTPQEYILKGVVNAALGQ
Sbjct: 241 GALQVLPPLVDVIPEARLNLVIYYLRQDDVQEAYNLIKDLEPTTPQEYILKGVVNAALGQ 300

Query: 301 EMGSRDHMKIAQQFFQLVGGSASECDTIPGRQCMASCFFLLKQFDDVLIYLNSFKSYFYN 360
           EMGSRDHMKIAQQFFQLVGGSASECDTIPGRQCMASCFFLLKQFDDVLIYLNSFKSYFYN
Sbjct: 301 EMGSRDHMKIAQQFFQLVGGSASECDTIPGRQCMASCFFLLKQFDDVLIYLNSFKSYFYN 360

Query: 361 DDIFNFNYAQAKAATGNTSEGEEAFLLIQSEKMKNDYIYLSWLARCYIMNKKPRLAWELY 420
           DDIFNFNYAQAKAATGNTSEGEEAFLLIQSEKMKNDYIYLSWLARCYIMNKKPRLAWELY
Sbjct: 361 DDIFNFNYAQAKAATGNTSEGEEAFLLIQSEKMKNDYIYLSWLARCYIMNKKPRLAWELY 420

Query: 421 LKMETSGESFSLLQLIANDCYKMGQFYYSAKAFDVLERLDPNPEYWEGKRGACVGIFQMI 480
           LKMETSGESFSLLQLIANDCYKMGQFYYSAKAFDVLERLDPNPEYWEGKRGACVGIFQMI
Sbjct: 421 LKMETSGESFSLLQLIANDCYKMGQFYYSAKAFDVLERLDPNPEYWEGKRGACVGIFQMI 480

Query: 481 IAGREPKETLREVLHLLRSTGNTQVEYMIRIMKKWAKENRVSI 523
           IAGREPKETLREVLHLLRSTGNTQVEYMIRIMKKWAKENRVSI
Sbjct: 481 IAGREPKETLREVLHLLRSTGNTQVEYMIRIMKKWAKENRVSI 523


>gi|222136634 tetratricopeptide repeat domain 26 isoform 1 [Homo
           sapiens]
          Length = 554

 Score = 1035 bits (2676), Expect = 0.0
 Identities = 523/554 (94%), Positives = 523/554 (94%), Gaps = 31/554 (5%)

Query: 1   MMLSRAKPAVGRGVQHTDKRKKKGRKIPKLEELLSKRDFTGAITL--------------- 45
           MMLSRAKPAVGRGVQHTDKRKKKGRKIPKLEELLSKRDFTGAITL               
Sbjct: 1   MMLSRAKPAVGRGVQHTDKRKKKGRKIPKLEELLSKRDFTGAITLLEFKRHVGEEEEDTN 60

Query: 46  ----------------LEEYENATKEENCNSEVWVNLACTYFFLGMYKQAEAAGFKASKS 89
                           LEEYENATKEENCNSEVWVNLACTYFFLGMYKQAEAAGFKASKS
Sbjct: 61  LWIGYCAFHLGDYKRALEEYENATKEENCNSEVWVNLACTYFFLGMYKQAEAAGFKASKS 120

Query: 90  RLQNRLLFHLAHKFNDEKKLMSFHQNLQDVTEDQLSLASIHYMRSHYQEAIDIYKRILLD 149
           RLQNRLLFHLAHKFNDEKKLMSFHQNLQDVTEDQLSLASIHYMRSHYQEAIDIYKRILLD
Sbjct: 121 RLQNRLLFHLAHKFNDEKKLMSFHQNLQDVTEDQLSLASIHYMRSHYQEAIDIYKRILLD 180

Query: 150 NREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIALNLKACNHFRLYNGRAAEA 209
           NREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIALNLKACNHFRLYNGRAAEA
Sbjct: 181 NREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIALNLKACNHFRLYNGRAAEA 240

Query: 210 ELKSLMDNASSSFEFAKELIRHNLVVFRGGEGALQVLPPLVDVIPEARLNLVIYYLRQDD 269
           ELKSLMDNASSSFEFAKELIRHNLVVFRGGEGALQVLPPLVDVIPEARLNLVIYYLRQDD
Sbjct: 241 ELKSLMDNASSSFEFAKELIRHNLVVFRGGEGALQVLPPLVDVIPEARLNLVIYYLRQDD 300

Query: 270 VQEAYNLIKDLEPTTPQEYILKGVVNAALGQEMGSRDHMKIAQQFFQLVGGSASECDTIP 329
           VQEAYNLIKDLEPTTPQEYILKGVVNAALGQEMGSRDHMKIAQQFFQLVGGSASECDTIP
Sbjct: 301 VQEAYNLIKDLEPTTPQEYILKGVVNAALGQEMGSRDHMKIAQQFFQLVGGSASECDTIP 360

Query: 330 GRQCMASCFFLLKQFDDVLIYLNSFKSYFYNDDIFNFNYAQAKAATGNTSEGEEAFLLIQ 389
           GRQCMASCFFLLKQFDDVLIYLNSFKSYFYNDDIFNFNYAQAKAATGNTSEGEEAFLLIQ
Sbjct: 361 GRQCMASCFFLLKQFDDVLIYLNSFKSYFYNDDIFNFNYAQAKAATGNTSEGEEAFLLIQ 420

Query: 390 SEKMKNDYIYLSWLARCYIMNKKPRLAWELYLKMETSGESFSLLQLIANDCYKMGQFYYS 449
           SEKMKNDYIYLSWLARCYIMNKKPRLAWELYLKMETSGESFSLLQLIANDCYKMGQFYYS
Sbjct: 421 SEKMKNDYIYLSWLARCYIMNKKPRLAWELYLKMETSGESFSLLQLIANDCYKMGQFYYS 480

Query: 450 AKAFDVLERLDPNPEYWEGKRGACVGIFQMIIAGREPKETLREVLHLLRSTGNTQVEYMI 509
           AKAFDVLERLDPNPEYWEGKRGACVGIFQMIIAGREPKETLREVLHLLRSTGNTQVEYMI
Sbjct: 481 AKAFDVLERLDPNPEYWEGKRGACVGIFQMIIAGREPKETLREVLHLLRSTGNTQVEYMI 540

Query: 510 RIMKKWAKENRVSI 523
           RIMKKWAKENRVSI
Sbjct: 541 RIMKKWAKENRVSI 554


>gi|222136605 tetratricopeptide repeat domain 26 isoform 2 [Homo
           sapiens]
          Length = 487

 Score =  870 bits (2249), Expect = 0.0
 Identities = 442/473 (93%), Positives = 442/473 (93%), Gaps = 31/473 (6%)

Query: 1   MMLSRAKPAVGRGVQHTDKRKKKGRKIPKLEELLSKRDFTGAITL--------------- 45
           MMLSRAKPAVGRGVQHTDKRKKKGRKIPKLEELLSKRDFTGAITL               
Sbjct: 1   MMLSRAKPAVGRGVQHTDKRKKKGRKIPKLEELLSKRDFTGAITLLEFKRHVGEEEEDTN 60

Query: 46  ----------------LEEYENATKEENCNSEVWVNLACTYFFLGMYKQAEAAGFKASKS 89
                           LEEYENATKEENCNSEVWVNLACTYFFLGMYKQAEAAGFKASKS
Sbjct: 61  LWIGYCAFHLGDYKRALEEYENATKEENCNSEVWVNLACTYFFLGMYKQAEAAGFKASKS 120

Query: 90  RLQNRLLFHLAHKFNDEKKLMSFHQNLQDVTEDQLSLASIHYMRSHYQEAIDIYKRILLD 149
           RLQNRLLFHLAHKFNDEKKLMSFHQNLQDVTEDQLSLASIHYMRSHYQEAIDIYKRILLD
Sbjct: 121 RLQNRLLFHLAHKFNDEKKLMSFHQNLQDVTEDQLSLASIHYMRSHYQEAIDIYKRILLD 180

Query: 150 NREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIALNLKACNHFRLYNGRAAEA 209
           NREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIALNLKACNHFRLYNGRAAEA
Sbjct: 181 NREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIALNLKACNHFRLYNGRAAEA 240

Query: 210 ELKSLMDNASSSFEFAKELIRHNLVVFRGGEGALQVLPPLVDVIPEARLNLVIYYLRQDD 269
           ELKSLMDNASSSFEFAKELIRHNLVVFRGGEGALQVLPPLVDVIPEARLNLVIYYLRQDD
Sbjct: 241 ELKSLMDNASSSFEFAKELIRHNLVVFRGGEGALQVLPPLVDVIPEARLNLVIYYLRQDD 300

Query: 270 VQEAYNLIKDLEPTTPQEYILKGVVNAALGQEMGSRDHMKIAQQFFQLVGGSASECDTIP 329
           VQEAYNLIKDLEPTTPQEYILKGVVNAALGQEMGSRDHMKIAQQFFQLVGGSASECDTIP
Sbjct: 301 VQEAYNLIKDLEPTTPQEYILKGVVNAALGQEMGSRDHMKIAQQFFQLVGGSASECDTIP 360

Query: 330 GRQCMASCFFLLKQFDDVLIYLNSFKSYFYNDDIFNFNYAQAKAATGNTSEGEEAFLLIQ 389
           GRQCMASCFFLLKQFDDVLIYLNSFKSYFYNDDIFNFNYAQAKAATGNTSEGEEAFLLIQ
Sbjct: 361 GRQCMASCFFLLKQFDDVLIYLNSFKSYFYNDDIFNFNYAQAKAATGNTSEGEEAFLLIQ 420

Query: 390 SEKMKNDYIYLSWLARCYIMNKKPRLAWELYLKMETSGESFSLLQLIANDCYK 442
           SEKMKNDYIYLSWLARCYIMNKKPRLAWELYLKMETSGESFSLLQLIANDCYK
Sbjct: 421 SEKMKNDYIYLSWLARCYIMNKKPRLAWELYLKMETSGESFSLLQLIANDCYK 473


>gi|31621305 leucine-rich PPR motif-containing protein [Homo
           sapiens]
          Length = 1394

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 30/138 (21%), Positives = 66/138 (47%), Gaps = 11/138 (7%)

Query: 22  KKGRKIPKLEELLSKRDFTGAITLLEEYENATKEENCNSEVWVNLACTYFFLGMYKQA-- 79
           +K + +P++ ++L K    G   L+++  +   +E     +  +L   +   G YK+A  
Sbjct: 850 EKYKVLPRIHDVLCKLVEKGETDLIQKAMDFVSQEQGEMVMLYDLFFAFLQTGNYKEAKK 909

Query: 80  --EAAGFKASKSRLQ---NRLLFHLAHKFNDEKKLMSFHQNLQDVTEDQL--SLASIHYM 132
             E  G +A  +RLQ   +R + +  ++    +KL+   Q L +   DQ+  +L  ++ +
Sbjct: 910 IIETPGIRARSARLQWFCDRCVAN--NQVETLEKLVELTQKLFECDRDQMYYNLLKLYKI 967

Query: 133 RSHYQEAIDIYKRILLDN 150
              +Q A  ++ +I  +N
Sbjct: 968 NGDWQRADAVWNKIQEEN 985


>gi|31317299 inhibitor of DNA binding 1 isoform a [Homo sapiens]
          Length = 155

 Score = 33.1 bits (74), Expect = 0.64
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 8/69 (11%)

Query: 218 ASSSFEFAKELIRHNLVVFRGGEGALQVLPPLVDVIPEARLNLVIYYLRQDDVQEAYNLI 277
           AS + E  + L   ++ + R   GA   LP L+D   E ++N+++Y     D+   Y+ +
Sbjct: 25  ASGAGEVVRCLSEQSVAISRCAGGAGARLPALLD---EQQVNVLLY-----DMNGCYSRL 76

Query: 278 KDLEPTTPQ 286
           K+L PT PQ
Sbjct: 77  KELVPTLPQ 85


>gi|31317297 inhibitor of DNA binding 1 isoform b [Homo sapiens]
          Length = 149

 Score = 33.1 bits (74), Expect = 0.64
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 8/69 (11%)

Query: 218 ASSSFEFAKELIRHNLVVFRGGEGALQVLPPLVDVIPEARLNLVIYYLRQDDVQEAYNLI 277
           AS + E  + L   ++ + R   GA   LP L+D   E ++N+++Y     D+   Y+ +
Sbjct: 25  ASGAGEVVRCLSEQSVAISRCAGGAGARLPALLD---EQQVNVLLY-----DMNGCYSRL 76

Query: 278 KDLEPTTPQ 286
           K+L PT PQ
Sbjct: 77  KELVPTLPQ 85


>gi|25952122 Bardet-Biedl syndrome 4 [Homo sapiens]
          Length = 519

 Score = 33.1 bits (74), Expect = 0.64
 Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 27/146 (18%)

Query: 46  LEEYENATKEENCNSEVWVNLACTYFFLGMYKQAEAAGFKASKSRLQNRLLFHLAHKFND 105
           +E Y  A K    + E+  NL   Y +L  + +A+         +L N L          
Sbjct: 121 IEVYNEAAKLNQKDWEISHNLGVCYIYLKQFNKAQ--------DQLHNAL---------- 162

Query: 106 EKKLMSFHQNLQDVTEDQLSLASIHYMRSHYQEAIDIYKRILLDNREYLALNVYVALCYY 165
                  + N  D+T   + L  IH +     +AI++YK+ +  + E   L   + L Y 
Sbjct: 163 -------NLNRHDLT--YIMLGKIHLLEGDLDKAIEVYKKAVEFSPENTELLTTLGLLYL 213

Query: 166 KLDYYDVSQEVLAVYLQQIPDSTIAL 191
           +L  Y  + E L   L   P +  A+
Sbjct: 214 QLGIYQKAFEHLGNALTYDPTNYKAI 239


>gi|225545550 TEL2, telomere maintenance 2, homolog [Homo sapiens]
          Length = 837

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 14/112 (12%)

Query: 197 NHFRLYNG---RAAEAELKSLMDNASSSFEFAKELIRHNLVVFRGGEGALQVLPPLVDVI 253
           N+FRL      R  +A + SL     SS  F  +++    V  R  E  L VL P +  +
Sbjct: 183 NYFRLLGEEVVRVLQAVVDSLQGGLDSSVSFVSQVLGKACVHGRQQE-ILGVLVPRLAAL 241

Query: 254 PEARLNLVIYYLRQDDVQEAYNLIKDLEPTTPQEYILKGVVNAALGQEMGSR 305
            +        YL Q   +  + L++ + P    E +L G+V AALG E+ SR
Sbjct: 242 TQGS------YLHQ---RVCWRLVEQV-PDRAMEAVLTGLVEAALGPEVLSR 283


>gi|60685231 tetratricopeptide repeat domain 7B [Homo sapiens]
          Length = 843

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 6/73 (8%)

Query: 121 EDQLSLASIHYMRSHYQEAIDIYKRILLDNREYLALNVYVALCYYKLDYYDVSQEVLAVY 180
           E  L +A ++Y+   Y+EA++IY R+ LD+    A+        Y+L     +     + 
Sbjct: 98  ESNLIMAKLNYVEGDYKEALNIYARVGLDDLPLTAVPP------YRLRVIAEAYATKGLC 151

Query: 181 LQQIPDSTIALNL 193
           L+++P S+   NL
Sbjct: 152 LEKLPISSSTSNL 164


>gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing
           protein) [Homo sapiens]
          Length = 543

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 23/134 (17%)

Query: 19  KRKKKGRKIPKL-EELLSKRDFTGAITLLEEYENATKEENCNSEVWVNLACTYFFLGMYK 77
           + KK+  K  +L  +   K+DF    T L+ Y+ A + +  N     N A  YF  G Y 
Sbjct: 220 ENKKQALKEKELGNDAYKKKDFD---TALKHYDKAKELDPTNMTYITNQAAVYFEKGDYN 276

Query: 78  QAEAAGFKASKSRLQNRLLFHLAHKFNDEKKLMSFHQNLQDVTEDQLSLASIHYMRSHYQ 137
           +      KA +   +NR                   ++ + + +    + + ++    Y+
Sbjct: 277 KCRELCEKAIEVGRENR-------------------EDYRQIAKAYARIGNSYFKEEKYK 317

Query: 138 EAIDIYKRILLDNR 151
           +AI  Y + L ++R
Sbjct: 318 DAIHFYNKSLAEHR 331


>gi|4505245 mannose receptor C type 1 precursor [Homo sapiens]
          Length = 1456

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 442  KMGQFYYSAKAFDVLERLDPNPEYWEGKRGACVGIFQMIIAGREPKETLREVLHLLRST 500
            K G  +YS K F +   ++   + W+  R AC+G    +++ +  KE      H+  ST
Sbjct: 946  KEGWNFYSNKCFKIFGFMEEERKNWQEARKACIGFGGNLVSIQNEKEQAFLTYHMKDST 1004


>gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]
          Length = 495

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 16/107 (14%)

Query: 36  KRDFTGAITLLEEYENATKEENCNSEVWVNLACTYFFLGMYKQAEAAGFK---ASKSRLQ 92
           KRD   A T++EE++   KEEN  +E   N A   ++L + KQ E    K   A +  L+
Sbjct: 153 KRDAEIAKTMMEEHKRIIKEENA-AEDKRNKAKAQYYLDLEKQLEEQEKKKQEAYEQLLK 211

Query: 93  NRLLF-HLAHKFNDEKKLMSFHQNLQDVTEDQLSLASIHYMRSHYQE 138
            +L+   +  K  +E +L           E Q  L  ++ MR + +E
Sbjct: 212 EKLMIDEIVRKIYEEDQL-----------EKQQKLEKMNAMRRYIEE 247


>gi|57546917 mannose receptor, C type 1-like 1 [Homo sapiens]
          Length = 1456

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 442  KMGQFYYSAKAFDVLERLDPNPEYWEGKRGACVGIFQMIIAGREPKETLREVLHLLRST 500
            K G  +YS K F +   ++   + W+  R AC+G    +++ +  KE      H+  ST
Sbjct: 946  KEGWNFYSNKCFKIFGFMEEERKNWQEARKACIGFGGNLVSIQNEKEQAFLTYHMKDST 1004


>gi|116089292 tetratricopeptide repeat domain 21B [Homo sapiens]
          Length = 1316

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)

Query: 270  VQEAYNLIKDLEPTTPQEYI-LKGVVNAALGQEMGSRDHMKIAQQFFQLVGGSASECDTI 328
            V+ A  L+K+L+P T Q ++ L+ + N  L   M ++    + Q        +ASE + I
Sbjct: 1101 VRTAEKLLKELKPQTVQGHVQLRIMENYCL---MATKQKSNVEQALNTFTEIAASEKEHI 1157

Query: 329  PGRQCMASCFFLLKQ 343
            P    MA+ + +LKQ
Sbjct: 1158 PALLGMATAYMILKQ 1172


>gi|53759120 tetratricopeptide repeat domain 8 isoform A [Homo
           sapiens]
          Length = 515

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 22/153 (14%)

Query: 86  ASKSRLQNRLLFHLAHKFNDEKKLMSF------HQNLQDVTEDQLSLASIHYMRSHYQEA 139
           + K +L   L  ++ H  ND K  +        H   +D    ++ +   +Y    Y+EA
Sbjct: 186 SQKPKLAKALFEYIFHHENDVKTALDLAALSTEHSQYKDWWW-KVQIGKCYYRLGMYREA 244

Query: 140 IDIYKRILLDNREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIALNLKACNHF 199
              +K  L   +E +   +Y+A  Y  LD    +  +    L + P     L    C   
Sbjct: 245 EKQFKSAL-KQQEMVDTFLYLAKVYVSLDQPVTALNLFKQGLDKFPGEVTLL----CGIA 299

Query: 200 RLYNGRAAEAELKSLMDNASSSFEFAKELIRHN 232
           R+Y            M+N SS+ E+ KE+++ +
Sbjct: 300 RIYEE----------MNNMSSAAEYYKEVLKQD 322


>gi|38146012 tetratricopeptide repeat domain 8 isoform B [Homo
           sapiens]
          Length = 505

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 22/153 (14%)

Query: 86  ASKSRLQNRLLFHLAHKFNDEKKLMSF------HQNLQDVTEDQLSLASIHYMRSHYQEA 139
           + K +L   L  ++ H  ND K  +        H   +D    ++ +   +Y    Y+EA
Sbjct: 176 SQKPKLAKALFEYIFHHENDVKTALDLAALSTEHSQYKDWWW-KVQIGKCYYRLGMYREA 234

Query: 140 IDIYKRILLDNREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIALNLKACNHF 199
              +K  L   +E +   +Y+A  Y  LD    +  +    L + P     L    C   
Sbjct: 235 EKQFKSAL-KQQEMVDTFLYLAKVYVSLDQPVTALNLFKQGLDKFPGEVTLL----CGIA 289

Query: 200 RLYNGRAAEAELKSLMDNASSSFEFAKELIRHN 232
           R+Y            M+N SS+ E+ KE+++ +
Sbjct: 290 RIYEE----------MNNMSSAAEYYKEVLKQD 312


>gi|27262638 sperm associated antigen 1 [Homo sapiens]
          Length = 926

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 24/94 (25%), Positives = 42/94 (44%)

Query: 135 HYQEAIDIYKRILLDNREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIALNLK 194
           +Y++A+  Y   L  N +  A+    ALCY KL  ++ +++     LQ    +  A   +
Sbjct: 638 NYKDALSKYSECLKINNKECAIYTNRALCYLKLCQFEEAKQDCDQALQLADGNVKAFYRR 697

Query: 195 ACNHFRLYNGRAAEAELKSLMDNASSSFEFAKEL 228
           A  H  L N + +  +L  ++    S  E   EL
Sbjct: 698 ALAHKGLKNYQKSLIDLNKVILLDPSIIEAKMEL 731


>gi|27262636 sperm associated antigen 1 [Homo sapiens]
          Length = 926

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 24/94 (25%), Positives = 42/94 (44%)

Query: 135 HYQEAIDIYKRILLDNREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIALNLK 194
           +Y++A+  Y   L  N +  A+    ALCY KL  ++ +++     LQ    +  A   +
Sbjct: 638 NYKDALSKYSECLKINNKECAIYTNRALCYLKLCQFEEAKQDCDQALQLADGNVKAFYRR 697

Query: 195 ACNHFRLYNGRAAEAELKSLMDNASSSFEFAKEL 228
           A  H  L N + +  +L  ++    S  E   EL
Sbjct: 698 ALAHKGLKNYQKSLIDLNKVILLDPSIIEAKMEL 731


>gi|11559925 X-prolyl aminopeptidase (aminopeptidase P) 3, putative
           [Homo sapiens]
          Length = 507

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 449 SAKAFDVLERLDPNPEYWEGKRGACVGIFQMIIAGREPKETLREVLHLL 497
           S KA   + R DP+ E W+G R    G   + + G +   TL E  HLL
Sbjct: 146 SHKAILFVPRRDPSRELWDGPRSGTDG--AIALTGVDEAYTLEEFQHLL 192


>gi|190358539 mitochondrial glycerol 3-phosphate acyltransferase
           [Homo sapiens]
          Length = 828

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 22/116 (18%)

Query: 349 IYLNSFKSYFYNDDIFNFNYAQAKAATGNTSEGEEAFLLIQSEKMKNDYIYLSWLARCYI 408
           + L  F S+F+N  I        KAAT    E     L +   +   DY+ L+++  C+ 
Sbjct: 192 VLLKLFNSFFWNIQIHKGQLEMVKAAT----ETNLPLLFLPVHRSHIDYLLLTFILFCHN 247

Query: 409 MNKKPRLAWELYLKMETSGESFSLLQLIANDCYKMGQFYYSAKAFDVLERLDPNPE 464
           + K P +A         SG + + + + +   +K+G F+       +  RLD  P+
Sbjct: 248 I-KAPYIA---------SGNNLN-IPIFSTLIHKLGGFF-------IRRRLDETPD 285


>gi|38146008 tetratricopeptide repeat domain 8 isoform C [Homo
           sapiens]
          Length = 475

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 34/149 (22%), Positives = 59/149 (39%), Gaps = 22/149 (14%)

Query: 90  RLQNRLLFHLAHKFNDEKKLMSF------HQNLQDVTEDQLSLASIHYMRSHYQEAIDIY 143
           RL   L  ++ H  ND K  +        H   +D    ++ +   +Y    Y+EA   +
Sbjct: 150 RLGTALFEYIFHHENDVKTALDLAALSTEHSQYKDWWW-KVQIGKCYYRLGMYREAEKQF 208

Query: 144 KRILLDNREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQIPDSTIALNLKACNHFRLYN 203
           K  L   +E +   +Y+A  Y  LD    +  +    L + P     L    C   R+Y 
Sbjct: 209 KSAL-KQQEMVDTFLYLAKVYVSLDQPVTALNLFKQGLDKFPGEVTLL----CGIARIYE 263

Query: 204 GRAAEAELKSLMDNASSSFEFAKELIRHN 232
                      M+N SS+ E+ KE+++ +
Sbjct: 264 E----------MNNMSSAAEYYKEVLKQD 282


>gi|22749211 transmembrane and tetratricopeptide repeat containing 2
           [Homo sapiens]
          Length = 836

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 106 EKKLMSFHQNLQDVTEDQLSLASIHYMRSHYQEAIDIYKRIL 147
           ++ L   H +   VT    +L  +++ + HY+EA+ +YK  +
Sbjct: 592 DENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEEALSVYKEAI 633


>gi|25777612 proteasome 26S non-ATPase subunit 3 [Homo sapiens]
          Length = 534

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 12/67 (17%)

Query: 399 YLSWLARCYIMNKK-----PRLAWELYLKMETSGESFSLLQLIANDCYKMGQFYYSAKAF 453
           YL  L   ++MN K      +++ +L  K+ T       L L+A  CY     YY A+ +
Sbjct: 166 YLQLLVVIFMMNSKRYKEAQKISDDLMQKISTQNRR--ALDLVAAKCY-----YYHARVY 218

Query: 454 DVLERLD 460
           + L++LD
Sbjct: 219 EFLDKLD 225


>gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]
          Length = 1007

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 16/58 (27%), Positives = 31/58 (53%)

Query: 202 YNGRAAEAELKSLMDNASSSFEFAKELIRHNLVVFRGGEGALQVLPPLVDVIPEARLN 259
           Y G+   + +    DNA ++ E A ++IR+N ++ + G   L+ L  L D  P+ + +
Sbjct: 692 YTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFH 749


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,571,097
Number of Sequences: 37866
Number of extensions: 782777
Number of successful extensions: 1896
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1877
Number of HSP's gapped (non-prelim): 38
length of query: 523
length of database: 18,247,518
effective HSP length: 107
effective length of query: 416
effective length of database: 14,195,856
effective search space: 5905476096
effective search space used: 5905476096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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