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Search of human proteins with 22165355
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22165355 thioesterase, adipose associated isoform BFIT1
[Homo sapiens]
(607 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22165355 thioesterase, adipose associated isoform BFIT1 [Homo... 1229 0.0
gi|22165400 thioesterase, adipose associated isoform BFIT2 [Homo... 1097 0.0
gi|18640736 acyl-CoA thioesterase 12 [Homo sapiens] 478 e-135
gi|75709208 acyl-CoA thioesterase 7 isoform hBACHa [Homo sapiens] 81 2e-15
gi|32528286 acyl-CoA thioesterase 7 isoform hBACHd [Homo sapiens] 79 2e-14
gi|32528284 acyl-CoA thioesterase 7 isoform hBACHc [Homo sapiens] 76 1e-13
gi|32528282 acyl-CoA thioesterase 7 isoform hBACHb [Homo sapiens] 74 3e-13
gi|31543657 StAR-related lipid transfer (START) domain containin... 41 0.004
gi|21040261 START domain containing protein 6 [Homo sapiens] 40 0.005
gi|41281907 StAR-related lipid transfer (START) domain containin... 33 0.58
gi|16445031 StAR-related lipid transfer (START) domain containin... 33 0.58
gi|41281898 StAR-related lipid transfer (START) domain containin... 33 0.58
gi|163914394 DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo... 32 1.3
gi|215820652 StAR-related lipid transfer (START) domain containi... 32 1.3
gi|215820650 StAR-related lipid transfer (START) domain containi... 32 1.3
gi|31543659 StAR-related lipid transfer (START) domain containin... 32 1.3
gi|13273317 homeobox B8 [Homo sapiens] 32 2.2
gi|15029506 homeobox D8 [Homo sapiens] 31 2.9
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 31 3.8
gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens] 31 3.8
gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens] 31 3.8
gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens] 31 3.8
gi|71565160 SMC1 structural maintenance of chromosomes 1-like 2 ... 30 4.9
>gi|22165355 thioesterase, adipose associated isoform BFIT1 [Homo
sapiens]
Length = 607
Score = 1229 bits (3181), Expect = 0.0
Identities = 607/607 (100%), Positives = 607/607 (100%)
Query: 1 MIQNVGNHLRRGLASVFSNRTSRKSALRAGNDSAMADGEGYRNPTEVQMSQLVLPCHTNQ 60
MIQNVGNHLRRGLASVFSNRTSRKSALRAGNDSAMADGEGYRNPTEVQMSQLVLPCHTNQ
Sbjct: 1 MIQNVGNHLRRGLASVFSNRTSRKSALRAGNDSAMADGEGYRNPTEVQMSQLVLPCHTNQ 60
Query: 61 RGELSVGQLLKWIDTTACLSAERHAGCPCVTASMDDIYFEHTISVGQVVNIKAKVNRAFN 120
RGELSVGQLLKWIDTTACLSAERHAGCPCVTASMDDIYFEHTISVGQVVNIKAKVNRAFN
Sbjct: 61 RGELSVGQLLKWIDTTACLSAERHAGCPCVTASMDDIYFEHTISVGQVVNIKAKVNRAFN 120
Query: 121 SSMEVGIQVASEDLCSEKQWNVCKALATFVARREITKVKLKQITPRTEEEKMEHSVAAER 180
SSMEVGIQVASEDLCSEKQWNVCKALATFVARREITKVKLKQITPRTEEEKMEHSVAAER
Sbjct: 121 SSMEVGIQVASEDLCSEKQWNVCKALATFVARREITKVKLKQITPRTEEEKMEHSVAAER 180
Query: 181 RRMRLVYADTIKDLLANCAIQGDLESRDCSRMVPAEKTRVESVELVLPPHANHQGNTFGG 240
RRMRLVYADTIKDLLANCAIQGDLESRDCSRMVPAEKTRVESVELVLPPHANHQGNTFGG
Sbjct: 181 RRMRLVYADTIKDLLANCAIQGDLESRDCSRMVPAEKTRVESVELVLPPHANHQGNTFGG 240
Query: 241 QIMAWMENVATIAASRLCRAHPTLKAIEMFHFRGPSQVGDRLVLKAIVNNAFKHSMEVGV 300
QIMAWMENVATIAASRLCRAHPTLKAIEMFHFRGPSQVGDRLVLKAIVNNAFKHSMEVGV
Sbjct: 241 QIMAWMENVATIAASRLCRAHPTLKAIEMFHFRGPSQVGDRLVLKAIVNNAFKHSMEVGV 300
Query: 301 CVEAYRQEAETHRRHINSAFMTFVVLDADDQPQLLPWIRPQPGDGERRYREASARKKIRL 360
CVEAYRQEAETHRRHINSAFMTFVVLDADDQPQLLPWIRPQPGDGERRYREASARKKIRL
Sbjct: 301 CVEAYRQEAETHRRHINSAFMTFVVLDADDQPQLLPWIRPQPGDGERRYREASARKKIRL 360
Query: 361 DRKYIVSCKQTEVPLSVPWDPSNQVYLSYNNVSSLKMLVAKDNWVLSSEISQVRLYTLED 420
DRKYIVSCKQTEVPLSVPWDPSNQVYLSYNNVSSLKMLVAKDNWVLSSEISQVRLYTLED
Sbjct: 361 DRKYIVSCKQTEVPLSVPWDPSNQVYLSYNNVSSLKMLVAKDNWVLSSEISQVRLYTLED 420
Query: 421 DKFLSFHMEMVVHVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYHVTSPALG 480
DKFLSFHMEMVVHVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYHVTSPALG
Sbjct: 421 DKFLSFHMEMVVHVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYHVTSPALG 480
Query: 481 GHTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQ 540
GHTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQ
Sbjct: 481 GHTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQ 540
Query: 541 LTKCCWVRVSLTELVSASGFYSWGLESRSKGRRSDGWNGKLAGGHLSTLKAIPVAKINSR 600
LTKCCWVRVSLTELVSASGFYSWGLESRSKGRRSDGWNGKLAGGHLSTLKAIPVAKINSR
Sbjct: 541 LTKCCWVRVSLTELVSASGFYSWGLESRSKGRRSDGWNGKLAGGHLSTLKAIPVAKINSR 600
Query: 601 FGYLQDT 607
FGYLQDT
Sbjct: 601 FGYLQDT 607
>gi|22165400 thioesterase, adipose associated isoform BFIT2 [Homo
sapiens]
Length = 594
Score = 1097 bits (2838), Expect = 0.0
Identities = 543/543 (100%), Positives = 543/543 (100%)
Query: 1 MIQNVGNHLRRGLASVFSNRTSRKSALRAGNDSAMADGEGYRNPTEVQMSQLVLPCHTNQ 60
MIQNVGNHLRRGLASVFSNRTSRKSALRAGNDSAMADGEGYRNPTEVQMSQLVLPCHTNQ
Sbjct: 1 MIQNVGNHLRRGLASVFSNRTSRKSALRAGNDSAMADGEGYRNPTEVQMSQLVLPCHTNQ 60
Query: 61 RGELSVGQLLKWIDTTACLSAERHAGCPCVTASMDDIYFEHTISVGQVVNIKAKVNRAFN 120
RGELSVGQLLKWIDTTACLSAERHAGCPCVTASMDDIYFEHTISVGQVVNIKAKVNRAFN
Sbjct: 61 RGELSVGQLLKWIDTTACLSAERHAGCPCVTASMDDIYFEHTISVGQVVNIKAKVNRAFN 120
Query: 121 SSMEVGIQVASEDLCSEKQWNVCKALATFVARREITKVKLKQITPRTEEEKMEHSVAAER 180
SSMEVGIQVASEDLCSEKQWNVCKALATFVARREITKVKLKQITPRTEEEKMEHSVAAER
Sbjct: 121 SSMEVGIQVASEDLCSEKQWNVCKALATFVARREITKVKLKQITPRTEEEKMEHSVAAER 180
Query: 181 RRMRLVYADTIKDLLANCAIQGDLESRDCSRMVPAEKTRVESVELVLPPHANHQGNTFGG 240
RRMRLVYADTIKDLLANCAIQGDLESRDCSRMVPAEKTRVESVELVLPPHANHQGNTFGG
Sbjct: 181 RRMRLVYADTIKDLLANCAIQGDLESRDCSRMVPAEKTRVESVELVLPPHANHQGNTFGG 240
Query: 241 QIMAWMENVATIAASRLCRAHPTLKAIEMFHFRGPSQVGDRLVLKAIVNNAFKHSMEVGV 300
QIMAWMENVATIAASRLCRAHPTLKAIEMFHFRGPSQVGDRLVLKAIVNNAFKHSMEVGV
Sbjct: 241 QIMAWMENVATIAASRLCRAHPTLKAIEMFHFRGPSQVGDRLVLKAIVNNAFKHSMEVGV 300
Query: 301 CVEAYRQEAETHRRHINSAFMTFVVLDADDQPQLLPWIRPQPGDGERRYREASARKKIRL 360
CVEAYRQEAETHRRHINSAFMTFVVLDADDQPQLLPWIRPQPGDGERRYREASARKKIRL
Sbjct: 301 CVEAYRQEAETHRRHINSAFMTFVVLDADDQPQLLPWIRPQPGDGERRYREASARKKIRL 360
Query: 361 DRKYIVSCKQTEVPLSVPWDPSNQVYLSYNNVSSLKMLVAKDNWVLSSEISQVRLYTLED 420
DRKYIVSCKQTEVPLSVPWDPSNQVYLSYNNVSSLKMLVAKDNWVLSSEISQVRLYTLED
Sbjct: 361 DRKYIVSCKQTEVPLSVPWDPSNQVYLSYNNVSSLKMLVAKDNWVLSSEISQVRLYTLED 420
Query: 421 DKFLSFHMEMVVHVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYHVTSPALG 480
DKFLSFHMEMVVHVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYHVTSPALG
Sbjct: 421 DKFLSFHMEMVVHVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYHVTSPALG 480
Query: 481 GHTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQ 540
GHTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQ
Sbjct: 481 GHTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQ 540
Query: 541 LTK 543
LTK
Sbjct: 541 LTK 543
>gi|18640736 acyl-CoA thioesterase 12 [Homo sapiens]
Length = 555
Score = 478 bits (1230), Expect = e-135
Identities = 256/494 (51%), Positives = 336/494 (68%), Gaps = 5/494 (1%)
Query: 44 PTEVQMSQLVLPCHTNQRGELSVGQLLKWIDTTACLSAERHAGCPCVTASMDDIYFEHTI 103
P EV MSQ + P H RGELS GQLLKWIDTTACL+AE+HAG CVTAS+DDI FE T
Sbjct: 6 PGEVVMSQAIQPAHATARGELSAGQLLKWIDTTACLAAEKHAGVSCVTASVDDIQFEETA 65
Query: 104 SVGQVVNIKAKVNRAFNSSMEVGIQVASEDLCSEKQWNVCKALATFVARRE-ITKVKLKQ 162
VGQV+ IKAKV RAF++SME+ I+V +D+ + + V A +TFVA+ K+ LK
Sbjct: 66 RVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLKP 125
Query: 163 ITPRTEEEKMEHSVAAERRRMRLVYADTIKDLLANCAIQGDLESRDCSRMVPAEKTRVES 222
+T TE++ +EH++AAERR++RL + DT +L+ + DL + V T V+S
Sbjct: 126 VTLLTEQDHVEHNLAAERRKVRLQHEDTFNNLMKESSKFDDLIFDEEEGAVSTRGTSVQS 185
Query: 223 VELVLPPHANHQGNTFGGQIMAWMENVATIAASRLCRAHPTLKAIEMFHFRGPSQVGDRL 282
+ELVLPPHANH GNTFGGQIMAWME VATI+ASRLC AHP LK+++MF FRGPS VGDRL
Sbjct: 186 IELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAHPFLKSVDMFKFRGPSTVGDRL 245
Query: 283 VLKAIVNNAFKHSMEVGVCVEAY--RQEAETHRRHINSAFMTFVVLDADDQPQLLPWIRP 340
V AIVNN F+ +EVGV VEA+ ++ AE RHINSAF+ + D + P I+P
Sbjct: 246 VFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRHINSAFLIYNAADDKENLITFPRIQP 305
Query: 341 QPGDGERRYREASARKKIRLDRKYIVSCKQTEVPLSVPWDPSNQVYLSYNNVSSLKMLVA 400
D RRYR A ARK+IRL RKY++S K+ EVPL + WD S Q LS +NV +LK L A
Sbjct: 306 ISKDDFRRYRGAIARKRIRLGRKYVISHKE-EVPLCIHWDISKQASLSDSNVEALKKLAA 364
Query: 401 KDNWVLSSEISQVRLYTLEDDKFLSFHMEMVVHVDAAQAFLLLSDLRQRPEWDKHYRSVE 460
K W ++S + ++++YTLE+ LS +E V A A+ LLSD +RP WD H+ S E
Sbjct: 365 KRGWEVTSTVEKIKIYTLEEHDVLSVWVEKHVGSPAHLAYRLLSDFTKRPLWDPHFVSCE 424
Query: 461 LVQQVDEDDAIYHVTSPALGGHTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETP 520
++ V EDD +YH+T P L KP+D V+L SRRKP +G+ Y +A++SV LP+ +P
Sbjct: 425 VIDWVSEDDQLYHITCPIL-NDDKPKDLVVLVSRRKPLKDGNTYTVAVKSVILPSVPPSP 483
Query: 521 EYRRGETLCSGFCL 534
+Y R E +C+GF +
Sbjct: 484 QYIRSEIICAGFLI 497
>gi|75709208 acyl-CoA thioesterase 7 isoform hBACHa [Homo sapiens]
Length = 370
Score = 81.3 bits (199), Expect = 2e-15
Identities = 74/333 (22%), Positives = 140/333 (42%), Gaps = 28/333 (8%)
Query: 38 GEGYRNPTEVQMSQLVLPCHTNQRGELSVGQLLKWIDTTACLSAERHAG------CPCVT 91
G P+ +Q+ +++ P N G + G +LK I+ + + RH C
Sbjct: 35 GPDVETPSAIQICRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAAL 94
Query: 92 ASMDDIYFEHTISVGQVVNIKAKVNRAFNSSMEVGIQVASEDLCSEKQWNVCKALATFVA 151
A ++ F + +G+V ++ A++ S+EV + V SE++ + + KA +V
Sbjct: 95 ARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVP 154
Query: 152 RREITKVKLKQITP------RTEEEKMEHSVAAERRRMRLVY--ADTIKDLLANCAIQGD 203
K+ ++ P EEE + A + RM + D ++ +L +
Sbjct: 155 LSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVL-------N 207
Query: 204 LESRDCSRMVPAEKTRVESVELVLPPHANHQGNTFGGQIMAWMENVATIAASRLCRAHPT 263
E S ++ + LV P G GG M M+ VA I A+R C+ +
Sbjct: 208 PEPNTVSY------SQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIV 261
Query: 264 LKAIEMFHFRGPSQVGDRLVLKAIVNNAFKHSMEVGVCVEAYRQEAETHRRH-INSAFMT 322
+++ +F + G + + + SME+ V V+A + +R+ SAF T
Sbjct: 262 TASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFT 321
Query: 323 FVVLDADDQPQLLPWIRPQPGDGERRYREASAR 355
+V L + + +P + P+ D ++R+ E R
Sbjct: 322 YVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGR 354
>gi|32528286 acyl-CoA thioesterase 7 isoform hBACHd [Homo sapiens]
Length = 329
Score = 78.6 bits (192), Expect = 2e-14
Identities = 73/323 (22%), Positives = 137/323 (42%), Gaps = 28/323 (8%)
Query: 48 QMSQLVLPCHTNQRGELSVGQLLKWIDTTACLSAERHAG------CPCVTASMDDIYFEH 101
Q+S+++ P N G + G +LK I+ + + RH C A ++ F
Sbjct: 4 QLSRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLS 63
Query: 102 TISVGQVVNIKAKVNRAFNSSMEVGIQVASEDLCSEKQWNVCKALATFVARREITKVKLK 161
+ +G+V ++ A++ S+EV + V SE++ + + KA +V K+
Sbjct: 64 PMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVL 123
Query: 162 QITP------RTEEEKMEHSVAAERRRMRLVY--ADTIKDLLANCAIQGDLESRDCSRMV 213
++ P EEE + A + RM + D ++ +L + E S
Sbjct: 124 EVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVL-------NPEPNTVSY-- 174
Query: 214 PAEKTRVESVELVLPPHANHQGNTFGGQIMAWMENVATIAASRLCRAHPTLKAIEMFHFR 273
++ + LV P G GG M M+ VA I A+R C+ + +++ +F
Sbjct: 175 ----SQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFH 230
Query: 274 GPSQVGDRLVLKAIVNNAFKHSMEVGVCVEAYRQEAETHRRH-INSAFMTFVVLDADDQP 332
+ G + + + SME+ V V+A + +R+ SAF T+V L + +
Sbjct: 231 DKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRS 290
Query: 333 QLLPWIRPQPGDGERRYREASAR 355
+P + P+ D ++R+ E R
Sbjct: 291 LPVPQLVPETEDEKKRFEEGKGR 313
Score = 58.5 bits (140), Expect = 2e-08
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 44 PTEVQMSQ-----LVLPCHTNQRGELSVGQLLKWIDTTACLSAERHAGCPCVTASMDDIY 98
P V SQ LV P G + G +K +D A + A RH VTAS+D I
Sbjct: 169 PNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAIN 228
Query: 99 FEHTISVGQVVNIKAKVNRAFNSSMEVGIQVASEDL--CSEKQWNVCKALATFVA-RREI 155
F I G V+ I ++ N SME+ + V ++ + S+K++ A T+V+ +E
Sbjct: 229 FHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEG 288
Query: 156 TKVKLKQITPRTEEEK 171
+ + Q+ P TE+EK
Sbjct: 289 RSLPVPQLVPETEDEK 304
>gi|32528284 acyl-CoA thioesterase 7 isoform hBACHc [Homo sapiens]
Length = 350
Score = 75.9 bits (185), Expect = 1e-13
Identities = 72/320 (22%), Positives = 134/320 (41%), Gaps = 28/320 (8%)
Query: 51 QLVLPCHTNQRGELSVGQLLKWIDTTACLSAERHAG------CPCVTASMDDIYFEHTIS 104
Q++ P N G + G +LK I+ + + RH C A ++ F +
Sbjct: 28 QIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMC 87
Query: 105 VGQVVNIKAKVNRAFNSSMEVGIQVASEDLCSEKQWNVCKALATFVARREITKVKLKQIT 164
+G+V ++ A++ S+EV + V SE++ + + KA +V K+ ++
Sbjct: 88 IGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVP 147
Query: 165 P------RTEEEKMEHSVAAERRRMRLVY--ADTIKDLLANCAIQGDLESRDCSRMVPAE 216
P EEE + A + RM + D ++ +L + E S
Sbjct: 148 PVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVL-------NPEPNTVSY----- 195
Query: 217 KTRVESVELVLPPHANHQGNTFGGQIMAWMENVATIAASRLCRAHPTLKAIEMFHFRGPS 276
++ + LV P G GG M M+ VA I A+R C+ + +++ +F
Sbjct: 196 -SQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKI 254
Query: 277 QVGDRLVLKAIVNNAFKHSMEVGVCVEAYRQEAETHRRH-INSAFMTFVVLDADDQPQLL 335
+ G + + + SME+ V V+A + +R+ SAF T+V L + + +
Sbjct: 255 RKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPV 314
Query: 336 PWIRPQPGDGERRYREASAR 355
P + P+ D ++R+ E R
Sbjct: 315 PQLVPETEDEKKRFEEGKGR 334
Score = 58.5 bits (140), Expect = 2e-08
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 44 PTEVQMSQ-----LVLPCHTNQRGELSVGQLLKWIDTTACLSAERHAGCPCVTASMDDIY 98
P V SQ LV P G + G +K +D A + A RH VTAS+D I
Sbjct: 190 PNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAIN 249
Query: 99 FEHTISVGQVVNIKAKVNRAFNSSMEVGIQVASEDL--CSEKQWNVCKALATFVA-RREI 155
F I G V+ I ++ N SME+ + V ++ + S+K++ A T+V+ +E
Sbjct: 250 FHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEG 309
Query: 156 TKVKLKQITPRTEEEK 171
+ + Q+ P TE+EK
Sbjct: 310 RSLPVPQLVPETEDEK 325
>gi|32528282 acyl-CoA thioesterase 7 isoform hBACHb [Homo sapiens]
Length = 380
Score = 74.3 bits (181), Expect = 3e-13
Identities = 71/320 (22%), Positives = 134/320 (41%), Gaps = 28/320 (8%)
Query: 51 QLVLPCHTNQRGELSVGQLLKWIDTTACLSAERHAG------CPCVTASMDDIYFEHTIS 104
+++ P N G + G +LK I+ + + RH C A ++ F +
Sbjct: 58 RIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMC 117
Query: 105 VGQVVNIKAKVNRAFNSSMEVGIQVASEDLCSEKQWNVCKALATFVARREITKVKLKQIT 164
+G+V ++ A++ S+EV + V SE++ + + KA +V K+ ++
Sbjct: 118 IGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVP 177
Query: 165 P------RTEEEKMEHSVAAERRRMRLVY--ADTIKDLLANCAIQGDLESRDCSRMVPAE 216
P EEE + A + RM + D ++ +L + E S
Sbjct: 178 PVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVL-------NPEPNTVSY----- 225
Query: 217 KTRVESVELVLPPHANHQGNTFGGQIMAWMENVATIAASRLCRAHPTLKAIEMFHFRGPS 276
++ + LV P G GG M M+ VA I A+R C+ + +++ +F
Sbjct: 226 -SQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKI 284
Query: 277 QVGDRLVLKAIVNNAFKHSMEVGVCVEAYRQEAETHRRH-INSAFMTFVVLDADDQPQLL 335
+ G + + + SME+ V V+A + +R+ SAF T+V L + + +
Sbjct: 285 RKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPV 344
Query: 336 PWIRPQPGDGERRYREASAR 355
P + P+ D ++R+ E R
Sbjct: 345 PQLVPETEDEKKRFEEGKGR 364
Score = 58.5 bits (140), Expect = 2e-08
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 44 PTEVQMSQ-----LVLPCHTNQRGELSVGQLLKWIDTTACLSAERHAGCPCVTASMDDIY 98
P V SQ LV P G + G +K +D A + A RH VTAS+D I
Sbjct: 220 PNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAIN 279
Query: 99 FEHTISVGQVVNIKAKVNRAFNSSMEVGIQVASEDL--CSEKQWNVCKALATFVA-RREI 155
F I G V+ I ++ N SME+ + V ++ + S+K++ A T+V+ +E
Sbjct: 280 FHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEG 339
Query: 156 TKVKLKQITPRTEEEK 171
+ + Q+ P TE+EK
Sbjct: 340 RSLPVPQLVPETEDEK 355
>gi|31543657 StAR-related lipid transfer (START) domain containing 3
[Homo sapiens]
Length = 445
Score = 40.8 bits (94), Expect = 0.004
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 396 KMLVAKDNWVL--SSEISQVRLYTLEDDKFLSFHMEMVVHVD--AAQAFLLLSDLRQRPE 451
++L ++NW ++E +YT+E + FH + + A L+ ++ +PE
Sbjct: 251 QILAQEENWKFEKNNEYGDT-VYTIE----VPFHGKTFILKTFLPCPAELVYQEVILQPE 305
Query: 452 ----WDKHYRSVELVQQVDEDDAI-YHVTSPALGGHTKPQDFV----ILASRRKPCDNGD 502
W+K + +++Q+V+++ I Y V++ A GG P+DFV I R + +G
Sbjct: 306 RMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSG- 364
Query: 503 PYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQLTKCCWVRVSLTEL 554
+ S PTH+ Y RGE GF + + C +V + T+L
Sbjct: 365 --IATSHSAKPPTHK----YVRGENGPGGFIVLKSASNPRVCTFVWILNTDL 410
>gi|21040261 START domain containing protein 6 [Homo sapiens]
Length = 220
Score = 40.4 bits (93), Expect = 0.005
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 426 FHMEMVVHVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYH-VTSPALGGHTK 484
+ +E ++ A+ L R WDK + +V ++D D I H +T G
Sbjct: 48 YRVEGIIPESPAKLSDFLYQTGDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSIS 107
Query: 485 PQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETPEYRRGETLCSGF 532
P+DF+ L ++ G+ +I+ +SV P + + Y RG GF
Sbjct: 108 PRDFIDLVYIKR--YEGNMNIISSKSVDFPEYPPSSNYIRGYNHPCGF 153
>gi|41281907 StAR-related lipid transfer (START) domain containing 13
isoform beta [Homo sapiens]
Length = 1105
Score = 33.5 bits (75), Expect = 0.58
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 432 VHVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYHVTSPALGGHTKPQDFVIL 491
V V+A + +L LR+R WD+ + ++V+ +D IY ++ H +DFV+L
Sbjct: 949 VEVEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPS-RDFVVL 1007
Query: 492 ASRRKPCDNGDPYVIAL 508
+ + G +++L
Sbjct: 1008 RTWKTDLPKGMCTLVSL 1024
>gi|16445031 StAR-related lipid transfer (START) domain containing
13 isoform gamma [Homo sapiens]
Length = 995
Score = 33.5 bits (75), Expect = 0.58
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 432 VHVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYHVTSPALGGHTKPQDFVIL 491
V V+A + +L LR+R WD+ + ++V+ +D IY ++ H +DFV+L
Sbjct: 839 VEVEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPS-RDFVVL 897
Query: 492 ASRRKPCDNGDPYVIAL 508
+ + G +++L
Sbjct: 898 RTWKTDLPKGMCTLVSL 914
>gi|41281898 StAR-related lipid transfer (START) domain containing 13
isoform alpha [Homo sapiens]
Length = 1113
Score = 33.5 bits (75), Expect = 0.58
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 432 VHVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYHVTSPALGGHTKPQDFVIL 491
V V+A + +L LR+R WD+ + ++V+ +D IY ++ H +DFV+L
Sbjct: 957 VEVEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPS-RDFVVL 1015
Query: 492 ASRRKPCDNGDPYVIAL 508
+ + G +++L
Sbjct: 1016 RTWKTDLPKGMCTLVSL 1032
>gi|163914394 DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo
sapiens]
Length = 717
Score = 32.3 bits (72), Expect = 1.3
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 503 PYVIALRSVTLPTHRE---TPEYRRGETLCSGFCLWREGDQLTKCCWVRVSLTELVSASG 559
PY +A RS+ L E T + G ++ C + L + CW R+ L E+ S G
Sbjct: 103 PYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGP--NTLLRFCWDRLLLQEVASTRG 160
Query: 560 FYSWGL----ESRSKGRRSDGWNGKLAGGHLSTL 589
+WG+ E++ + SD G L L L
Sbjct: 161 TGAWGVLVLDEAQERSVASDSLQGLLQDARLEKL 194
>gi|215820652 StAR-related lipid transfer (START) domain containing 8
isoform b [Homo sapiens]
Length = 1023
Score = 32.3 bits (72), Expect = 1.3
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 27/173 (15%)
Query: 434 VDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYHVTSPALGGHTKPQDFVILAS 493
V A A +L LR+R WD+ ++++ + +YH + ++ H +DFV+L
Sbjct: 869 VAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPGVELYHYVTDSMAPH-PCRDFVVLRM 927
Query: 494 RRKPCDNGDPYVIALRSVTLPTHRETPEYR-RGETLCSGFCLWREGDQLTKCCWVRVSLT 552
R G ++ S +L + PE R L S + + C R LT
Sbjct: 928 WRSDLPRGGCLLV---SQSLDPEQPVPESGVRALMLTSQYL-------MEPCGLGRSRLT 977
Query: 553 ELVSASGFYSWGLESRSKGRRSDGWNGKLAGGHLSTLKAIPVAKINSRFGYLQ 605
+ A +GR D +N GHL A+ VAKI F LQ
Sbjct: 978 HICRAD----------LRGRSPDWYNKVF--GHLC---AMEVAKIRDSFPTLQ 1015
>gi|215820650 StAR-related lipid transfer (START) domain containing 8
isoform a [Homo sapiens]
Length = 1103
Score = 32.3 bits (72), Expect = 1.3
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 27/173 (15%)
Query: 434 VDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYHVTSPALGGHTKPQDFVILAS 493
V A A +L LR+R WD+ ++++ + +YH + ++ H +DFV+L
Sbjct: 949 VAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPGVELYHYVTDSMAPH-PCRDFVVLRM 1007
Query: 494 RRKPCDNGDPYVIALRSVTLPTHRETPEYR-RGETLCSGFCLWREGDQLTKCCWVRVSLT 552
R G ++ S +L + PE R L S + + C R LT
Sbjct: 1008 WRSDLPRGGCLLV---SQSLDPEQPVPESGVRALMLTSQYL-------MEPCGLGRSRLT 1057
Query: 553 ELVSASGFYSWGLESRSKGRRSDGWNGKLAGGHLSTLKAIPVAKINSRFGYLQ 605
+ A +GR D +N GHL A+ VAKI F LQ
Sbjct: 1058 HICRAD----------LRGRSPDWYNKVF--GHLC---AMEVAKIRDSFPTLQ 1095
>gi|31543659 StAR-related lipid transfer (START) domain containing 8
isoform b [Homo sapiens]
Length = 1023
Score = 32.3 bits (72), Expect = 1.3
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 27/173 (15%)
Query: 434 VDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDEDDAIYHVTSPALGGHTKPQDFVILAS 493
V A A +L LR+R WD+ ++++ + +YH + ++ H +DFV+L
Sbjct: 869 VAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPGVELYHYVTDSMAPH-PCRDFVVLRM 927
Query: 494 RRKPCDNGDPYVIALRSVTLPTHRETPEYR-RGETLCSGFCLWREGDQLTKCCWVRVSLT 552
R G ++ S +L + PE R L S + + C R LT
Sbjct: 928 WRSDLPRGGCLLV---SQSLDPEQPVPESGVRALMLTSQYL-------MEPCGLGRSRLT 977
Query: 553 ELVSASGFYSWGLESRSKGRRSDGWNGKLAGGHLSTLKAIPVAKINSRFGYLQ 605
+ A +GR D +N GHL A+ VAKI F LQ
Sbjct: 978 HICRAD----------LRGRSPDWYNKVF--GHLC---AMEVAKIRDSFPTLQ 1015
>gi|13273317 homeobox B8 [Homo sapiens]
Length = 243
Score = 31.6 bits (70), Expect = 2.2
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 333 QLLPWIRPQPGDGERRYREASAR-KKIRLDRKYI 365
QL PW+RPQ G RR R+ +R + + L+++++
Sbjct: 133 QLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFL 166
>gi|15029506 homeobox D8 [Homo sapiens]
Length = 290
Score = 31.2 bits (69), Expect = 2.9
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 333 QLLPWIRPQPGDGERRYREASAR-KKIRLDRKYI 365
Q+ PW+RPQ G RR R+ +R + + L+++++
Sbjct: 184 QMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFL 217
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 30.8 bits (68), Expect = 3.8
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 169 EEKMEHSVAAERRRMRLVYADTIKDLLANCAIQGDLESRDCSRM 212
E+K ER R + D +KD+L+N IQ +LE R+ RM
Sbjct: 917 EKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELE-REFERM 959
>gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens]
Length = 452
Score = 30.8 bits (68), Expect = 3.8
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 132 EDLCSEKQWNVCKALATFVARREITKVKLKQITPRTEEEKMEH 174
E+ C +++ +C+ E K ++ Q+ RT+EEK+EH
Sbjct: 201 EECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEKLEH 243
>gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]
Length = 548
Score = 30.8 bits (68), Expect = 3.8
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 132 EDLCSEKQWNVCKALATFVARREITKVKLKQITPRTEEEKMEH 174
E+ C +++ +C+ E K ++ Q+ RT+EEK+EH
Sbjct: 201 EECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEKLEH 243
>gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]
Length = 540
Score = 30.8 bits (68), Expect = 3.8
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 132 EDLCSEKQWNVCKALATFVARREITKVKLKQITPRTEEEKMEH 174
E+ C +++ +C+ E K ++ Q+ RT+EEK+EH
Sbjct: 201 EECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEKLEH 243
>gi|71565160 SMC1 structural maintenance of chromosomes 1-like 2
[Homo sapiens]
Length = 1235
Score = 30.4 bits (67), Expect = 4.9
Identities = 25/120 (20%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 110 NIKAKVNRAFNSSMEVGIQVASEDL--CSEKQWNVCKALATFVARREITKVKLKQITPRT 167
++K K+N+ ++++ IQ SED+ + + N + + +A+++ ++K ++T +
Sbjct: 827 HLKKKLNKI--NTLKETIQKGSEDIDHLKKAEENCLQTVNELMAKQQ--QLKDIRVTQNS 882
Query: 168 EEEKMEHSVAAERRRMRLVYADTIKDLLANCAIQGDLESRDCSRMVPAEKTRVESVELVL 227
EK++ + ER++ V + K +IQ LE + + +V+ +E++L
Sbjct: 883 SAEKVQTQIEEERKKFLAVDREVGKLQKEVVSIQTSLEQKRLEKHNLLLDCKVQDIEIIL 942
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.132 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,184,045
Number of Sequences: 37866
Number of extensions: 932240
Number of successful extensions: 2090
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2046
Number of HSP's gapped (non-prelim): 27
length of query: 607
length of database: 18,247,518
effective HSP length: 108
effective length of query: 499
effective length of database: 14,157,990
effective search space: 7064837010
effective search space used: 7064837010
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.