Search of human proteins with 22027655

Search of human proteins with 22027655

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|22027655 adaptor-related protein complex 1 sigma 2 subunit
[Homo sapiens]
         (157 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22027655 adaptor-related protein complex 1 sigma 2 subunit [H...   314   2e-86
gi|4557471 adaptor-related protein complex 1, sigma 1 subunit [H...   283   4e-77
gi|88703051 adaptor-related protein complex 1, sigma 3 subunit [...   236   8e-63
gi|70906430 adaptor-related protein complex 2, sigma 1 subunit i...   142   9e-35
gi|189409104 adaptor-related protein complex 4, sigma 1 subunit ...   121   3e-28
gi|5031581 adaptor-related protein complex 3, sigma 2 subunit [H...   109   1e-24
gi|4502861 adaptor-related protein complex 3, sigma 1 subunit [H...   107   4e-24
gi|21361394 adaptor-related protein complex 4, sigma 1 subunit i...    95   3e-20
gi|11038643 adaptor-related protein complex 2, sigma 1 subunit i...    80   5e-16
gi|14917111 adaptor-related protein complex 4, mu 1 subunit [Hom...    39   0.002
gi|68799814 adaptor-related protein complex 2, mu 1 subunit isof...    37   0.007
gi|6912240 adaptor-related protein complex 3, mu 1 subunit [Homo...    36   0.012
gi|46370095 adaptor-related protein complex 3, mu 1 subunit [Hom...    36   0.012
gi|197209857 adaptor-related protein complex 3, mu 2 subunit [Ho...    36   0.012
gi|5803000 adaptor-related protein complex 3, mu 2 subunit [Homo...    36   0.012
gi|14917109 adaptor-related protein complex 2, mu 1 subunit isof...    36   0.012
gi|7705983 coatomer protein complex, subunit zeta 2 [Homo sapiens]     35   0.026
gi|7706337 coatomer protein complex, subunit zeta 1 [Homo sapiens]     35   0.034
gi|9506797 adaptor-related protein complex 1, mu 2 subunit [Homo...    34   0.045
gi|11863154 archain isoform 1 [Homo sapiens]                           32   0.17 
gi|194473724 adaptor-related protein complex 1, mu 1 subunit iso...    31   0.38 
gi|14210504 adaptor-related protein complex 1, mu 1 subunit isof...    31   0.38 
gi|239757058 PREDICTED: hypothetical protein [Homo sapiens]            28   4.2  
gi|71565160 SMC1 structural maintenance of chromosomes 1-like 2 ...    28   4.2  
gi|154354998 inositol 1,4,5-triphosphate receptor, type 1 isofor...    27   5.5  
gi|154354996 inositol 1,4,5-triphosphate receptor, type 1 isofor...    27   5.5  
gi|196114970 protein tyrosine phosphatase, non-receptor type 12 ...    27   7.1  
gi|196114967 protein tyrosine phosphatase, non-receptor type 12 ...    27   7.1  
gi|196114951 protein tyrosine phosphatase, non-receptor type 12 ...    27   7.1  
gi|52218826 olfactory receptor, family 1, subfamily J, member 4 ...    27   7.1  

>gi|22027655 adaptor-related protein complex 1 sigma 2 subunit [Homo
           sapiens]
          Length = 157

 Score =  314 bits (804), Expect = 2e-86
 Identities = 157/157 (100%), Positives = 157/157 (100%)

Query: 1   MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60
           MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR
Sbjct: 1   MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60

Query: 61  YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG 120
           YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG
Sbjct: 61  YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG 120

Query: 121 EVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGLT 157
           EVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGLT
Sbjct: 121 EVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGLT 157


>gi|4557471 adaptor-related protein complex 1, sigma 1 subunit [Homo
           sapiens]
          Length = 158

 Score =  283 bits (724), Expect = 4e-77
 Identities = 137/156 (87%), Positives = 150/156 (96%)

Query: 1   MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60
           M+FMLLFSRQGKLRLQKWY+  SDKE+KK+ REL+Q VLARKPKMCSFLEWRDLK+VYKR
Sbjct: 2   MRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKR 61

Query: 61  YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG 120
           YASLYFCCAIE QDNELITLE+IHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFL+GG
Sbjct: 62  YASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGG 121

Query: 121 EVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGL 156
           +VQ+TSKK+VLKAIEQADLLQEE E+PRSVLEE+GL
Sbjct: 122 DVQDTSKKSVLKAIEQADLLQEEDESPRSVLEEMGL 157


>gi|88703051 adaptor-related protein complex 1, sigma 3 subunit
           [Homo sapiens]
          Length = 154

 Score =  236 bits (601), Expect = 8e-63
 Identities = 109/145 (75%), Positives = 132/145 (91%)

Query: 1   MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60
           + F+LLFSRQGKLRLQKWY+ L DKE+KKITRE+VQ +L+R  +  SF++W++LK+VYKR
Sbjct: 2   IHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYKR 61

Query: 61  YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG 120
           YASLYFCCAIE+QDNEL+TLEI+HRYVELLDKYFG+VCELDIIFNFEKAYFILDEF++GG
Sbjct: 62  YASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGG 121

Query: 121 EVQETSKKNVLKAIEQADLLQEEAE 145
           E+QETSKK  +KAIE +D+LQE  E
Sbjct: 122 EIQETSKKIAVKAIEDSDMLQETME 146


>gi|70906430 adaptor-related protein complex 2, sigma 1 subunit
           isoform AP17 [Homo sapiens]
          Length = 142

 Score =  142 bits (359), Expect = 9e-35
 Identities = 64/134 (47%), Positives = 94/134 (70%)

Query: 1   MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60
           ++F+L+ +R GK RL KWY+   D EK+K+  E+   V  R  K  +F+E+R+ KI+Y+R
Sbjct: 2   IRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRR 61

Query: 61  YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG 120
           YA LYFC  ++  DN L  LE IH +VE+L++YF +VCELD++FNF K Y ++DE  L G
Sbjct: 62  YAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAG 121

Query: 121 EVQETSKKNVLKAI 134
           E++ETS+  VLK +
Sbjct: 122 EIRETSQTKVLKQL 135


>gi|189409104 adaptor-related protein complex 4, sigma 1 subunit
           isoform 2 [Homo sapiens]
          Length = 144

 Score =  121 bits (303), Expect = 3e-28
 Identities = 52/142 (36%), Positives = 94/142 (66%)

Query: 1   MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60
           ++F L+ ++QG+ RL K+Y  +   ++  +  E++++ L+R  + CSF+E++D K++Y++
Sbjct: 2   IKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYRQ 61

Query: 61  YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG 120
           YA+L+    + D +NE+   E IH +VE+LD+YF  V ELDI+FN +K + ILDE +L G
Sbjct: 62  YAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMFNLDKVHIILDEMVLNG 121

Query: 121 EVQETSKKNVLKAIEQADLLQE 142
            + ET++  +L  +   D + E
Sbjct: 122 CIVETNRARILAPLLILDKMSE 143


>gi|5031581 adaptor-related protein complex 3, sigma 2 subunit [Homo
           sapiens]
          Length = 193

 Score =  109 bits (272), Expect = 1e-24
 Identities = 55/148 (37%), Positives = 93/148 (62%), Gaps = 6/148 (4%)

Query: 1   MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEW------RDL 54
           +Q +L+F+  GK RL ++Y    ++ +++I RE    VL R   +C+FLE        D 
Sbjct: 2   IQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDY 61

Query: 55  KIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILD 114
           K++Y+ YA+LYF   ++  ++EL  L++I  +VE LDK F +VCELD+IF+ +K ++IL 
Sbjct: 62  KLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYILQ 121

Query: 115 EFLLGGEVQETSKKNVLKAIEQADLLQE 142
           E ++GG V ET+   ++  IE  + L++
Sbjct: 122 EVVMGGMVLETNMNEIVAQIEAQNRLEK 149


>gi|4502861 adaptor-related protein complex 3, sigma 1 subunit [Homo
           sapiens]
          Length = 193

 Score =  107 bits (267), Expect = 4e-24
 Identities = 55/145 (37%), Positives = 90/145 (62%), Gaps = 6/145 (4%)

Query: 4   MLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEW------RDLKIV 57
           +L+F+  GK RL K+Y P S+  +++I RE    V  R   +C+FLE        D K++
Sbjct: 5   ILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLI 64

Query: 58  YKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFL 117
           Y+ YA+LYF   ++  ++EL  L++I  +VE LDK F +VCELD+IF+ +K + IL E +
Sbjct: 65  YRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNILAEMV 124

Query: 118 LGGEVQETSKKNVLKAIEQADLLQE 142
           +GG V ET+   ++  I+  + L++
Sbjct: 125 MGGMVLETNMNEIVTQIDAQNKLEK 149


>gi|21361394 adaptor-related protein complex 4, sigma 1 subunit
           isoform 1 [Homo sapiens]
          Length = 159

 Score = 94.7 bits (234), Expect = 3e-20
 Identities = 38/104 (36%), Positives = 71/104 (68%)

Query: 1   MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60
           ++F L+ ++QG+ RL K+Y  +   ++  +  E++++ L+R  + CSF+E++D K++Y++
Sbjct: 2   IKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYRQ 61

Query: 61  YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIF 104
           YA+L+    + D +NE+   E IH +VE+LD+YF  V ELD+ F
Sbjct: 62  YAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDVSF 105


>gi|11038643 adaptor-related protein complex 2, sigma 1 subunit
           isoform AP17delta [Homo sapiens]
          Length = 104

 Score = 80.5 bits (197), Expect = 5e-16
 Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 38/134 (28%)

Query: 1   MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60
           ++F+L+ +R GK RL KWY+   D EK+K+  E+   V  R  K  +F            
Sbjct: 2   IRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNF------------ 49

Query: 61  YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG 120
                                     VE+L++YF +VCELD++FNF K Y ++DE  L G
Sbjct: 50  --------------------------VEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAG 83

Query: 121 EVQETSKKNVLKAI 134
           E++ETS+  VLK +
Sbjct: 84  EIRETSQTKVLKQL 97


>gi|14917111 adaptor-related protein complex 4, mu 1 subunit [Homo
           sapiens]
          Length = 453

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 25/79 (31%), Positives = 38/79 (48%)

Query: 57  VYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEF 116
           ++ R++ LY      +  +    LE++ R   LL  Y GS+ E  I  N    Y +LDE 
Sbjct: 57  IHIRHSGLYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEV 116

Query: 117 LLGGEVQETSKKNVLKAIE 135
           L  G VQ TS + +   I+
Sbjct: 117 LDYGYVQTTSTEMLRNFIQ 135


>gi|68799814 adaptor-related protein complex 2, mu 1 subunit isoform
           b [Homo sapiens]
          Length = 433

 Score = 37.0 bits (84), Expect = 0.007
 Identities = 25/151 (16%), Positives = 62/151 (41%), Gaps = 2/151 (1%)

Query: 4   MLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYAS 63
           + +++ +G++ + + Y    D  +  +    V  + AR+               + + ++
Sbjct: 5   LFIYNHKGEVLISRVY--RDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHVKRSN 62

Query: 64  LYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQ 123
           ++     +   N  +  E +++  +++  YFG + E +I  NF   Y +LDE L  G  Q
Sbjct: 63  IWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFGYPQ 122

Query: 124 ETSKKNVLKAIEQADLLQEEAETPRSVLEEI 154
            +    +   I Q  +  +  E    +  ++
Sbjct: 123 NSETGALKTFITQQGIKSQTKEEQSQITSQV 153


>gi|6912240 adaptor-related protein complex 3, mu 1 subunit [Homo
           sapiens]
          Length = 418

 Score = 36.2 bits (82), Expect = 0.012
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 64  LYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQ 123
           L+F   I+ +   L  +E +HR  +    YFG   E  I  N    Y +L+E L  G   
Sbjct: 64  LFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPL 123

Query: 124 ETSKKNVLKAI 134
            T + N+LK +
Sbjct: 124 AT-ESNILKEL 133


>gi|46370095 adaptor-related protein complex 3, mu 1 subunit [Homo
           sapiens]
          Length = 418

 Score = 36.2 bits (82), Expect = 0.012
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 64  LYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQ 123
           L+F   I+ +   L  +E +HR  +    YFG   E  I  N    Y +L+E L  G   
Sbjct: 64  LFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPL 123

Query: 124 ETSKKNVLKAI 134
            T + N+LK +
Sbjct: 124 AT-ESNILKEL 133


>gi|197209857 adaptor-related protein complex 3, mu 2 subunit [Homo
           sapiens]
          Length = 418

 Score = 36.2 bits (82), Expect = 0.012
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 64  LYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQ 123
           ++F   I+ +   L  +E +HR V+    YFG   E  I  N    Y +L+E L  G   
Sbjct: 64  IFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPL 123

Query: 124 ETSKKNVLKAI 134
            T + N+LK +
Sbjct: 124 AT-ESNILKEL 133


>gi|5803000 adaptor-related protein complex 3, mu 2 subunit [Homo
           sapiens]
          Length = 418

 Score = 36.2 bits (82), Expect = 0.012
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 64  LYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQ 123
           ++F   I+ +   L  +E +HR V+    YFG   E  I  N    Y +L+E L  G   
Sbjct: 64  IFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPL 123

Query: 124 ETSKKNVLKAI 134
            T + N+LK +
Sbjct: 124 AT-ESNILKEL 133


>gi|14917109 adaptor-related protein complex 2, mu 1 subunit isoform
           a [Homo sapiens]
          Length = 435

 Score = 36.2 bits (82), Expect = 0.012
 Identities = 30/159 (18%), Positives = 66/159 (41%), Gaps = 10/159 (6%)

Query: 4   MLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYAS 63
           + +++ +G++ + + Y    D  +  +    V  + AR+               + + ++
Sbjct: 5   LFIYNHKGEVLISRVY--RDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHVKRSN 62

Query: 64  LYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQ 123
           ++     +   N  +  E +++  +++  YFG + E +I  NF   Y +LDE L  G  Q
Sbjct: 63  IWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFGYPQ 122

Query: 124 ETSKKNVLKAI-------EQADLLQEEAETPRSVLEEIG 155
             S+   LK          Q    +E+++    V  +IG
Sbjct: 123 -NSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIG 160


>gi|7705983 coatomer protein complex, subunit zeta 2 [Homo sapiens]
          Length = 210

 Score = 35.0 bits (79), Expect = 0.026
 Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 4/133 (3%)

Query: 4   MLLFSRQGKLRLQKWYVPLSDKEKKKITREL-VQTVLARKPKMCSFLEWRDLKIVYKRYA 62
           + +    G+  L K+Y       K+++  E  V    +R     +F  +  + IVYK   
Sbjct: 49  VFILDNDGRRLLAKYYDDTFPSMKEQMVFEKNVFNKTSRTESEIAF--FGGMTIVYKNSI 106

Query: 63  SLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELD-IIFNFEKAYFILDEFLLGGE 121
            L+        +NEL+ + ++    E L+       E   ++ N + A+ +LDE + GG 
Sbjct: 107 DLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFLVLDEIVDGGV 166

Query: 122 VQETSKKNVLKAI 134
           + E+  + V++ +
Sbjct: 167 ILESDPQQVIQKV 179


>gi|7706337 coatomer protein complex, subunit zeta 1 [Homo sapiens]
          Length = 177

 Score = 34.7 bits (78), Expect = 0.034
 Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 6/134 (4%)

Query: 4   MLLFSRQGKLRLQKWYVPL--SDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRY 61
           +L+    G     K+Y     S KE+K   + +      R     + LE   L +VYK  
Sbjct: 16  ILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKT-HRTDSEIALLE--GLTVVYKSS 72

Query: 62  ASLYFCCAIEDQDNELITLEIIHRYVELLDKYF-GSVCELDIIFNFEKAYFILDEFLLGG 120
             LYF       +NEL+ + +++   + L +    +V +  ++ N E  +  +DE + GG
Sbjct: 73  IDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGG 132

Query: 121 EVQETSKKNVLKAI 134
            + E+  + V+  +
Sbjct: 133 VILESDPQQVVHRV 146


>gi|9506797 adaptor-related protein complex 1, mu 2 subunit [Homo
           sapiens]
          Length = 423

 Score = 34.3 bits (77), Expect = 0.045
 Identities = 21/92 (22%), Positives = 41/92 (44%)

Query: 45  MCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIF 104
           +   L    +  ++ ++++LY         N  +    +++ +E+  +YF  + E  I  
Sbjct: 46  LAPLLSHGQVHFLWIKHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRD 105

Query: 105 NFEKAYFILDEFLLGGEVQETSKKNVLKAIEQ 136
           NF   Y +LDE +  G  Q T  K + + I Q
Sbjct: 106 NFVIVYELLDELMDFGFPQTTDSKILQEYITQ 137


>gi|11863154 archain isoform 1 [Homo sapiens]
          Length = 511

 Score = 32.3 bits (72), Expect = 0.17
 Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 19/143 (13%)

Query: 29  KITRELVQTVLARKPKMCS------FLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEI 82
           ++TR  ++ +LA  PK+ +      F+E   ++ VY+    LY         N L  LE 
Sbjct: 23  EMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLET 82

Query: 83  IHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG-------------EVQETSKKN 129
           +  +  ++ +Y  ++ E +I  +     F  DE +  G                ++ ++ 
Sbjct: 83  LRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEK 142

Query: 130 VLKAIEQADLLQEEAETPRSVLE 152
           V +A+ +    + +AE  R   E
Sbjct: 143 VFRAVRETQEREAKAEMRRKAKE 165


>gi|194473724 adaptor-related protein complex 1, mu 1 subunit
           isoform 1 [Homo sapiens]
          Length = 435

 Score = 31.2 bits (69), Expect = 0.38
 Identities = 19/83 (22%), Positives = 39/83 (46%)

Query: 54  LKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFIL 113
           ++ ++ ++ +LY     +      +    +++ V++  +YF  + E  I  NF   Y +L
Sbjct: 55  VRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELL 114

Query: 114 DEFLLGGEVQETSKKNVLKAIEQ 136
           DE +  G  Q T  K + + I Q
Sbjct: 115 DELMDFGYPQTTDSKILQEYITQ 137


>gi|14210504 adaptor-related protein complex 1, mu 1 subunit isoform
           2 [Homo sapiens]
          Length = 423

 Score = 31.2 bits (69), Expect = 0.38
 Identities = 19/83 (22%), Positives = 39/83 (46%)

Query: 54  LKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFIL 113
           ++ ++ ++ +LY     +      +    +++ V++  +YF  + E  I  NF   Y +L
Sbjct: 55  VRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELL 114

Query: 114 DEFLLGGEVQETSKKNVLKAIEQ 136
           DE +  G  Q T  K + + I Q
Sbjct: 115 DELMDFGYPQTTDSKILQEYITQ 137


>gi|239757058 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 603

 Score = 27.7 bits (60), Expect = 4.2
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 69  AIEDQDNELITLEIIHRYV---ELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG 120
           A++++  EL++ E I  Y+   +LL  +  SVC+   +F F   +F  +  L GG
Sbjct: 180 ALKEKQTELLSEEKIVFYLSSPQLLAYFLISVCDQLALFRFHSTHFPRNTVLRGG 234


>gi|71565160 SMC1 structural maintenance of chromosomes 1-like 2
           [Homo sapiens]
          Length = 1235

 Score = 27.7 bits (60), Expect = 4.2
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query: 127 KKNVLKAIEQADLLQEEAETPRSVLEEI 154
           KKN+     QA L +EEAE  +S+LEE+
Sbjct: 189 KKNIAAERRQAKLEKEEAERYQSLLEEL 216


>gi|154354998 inositol 1,4,5-triphosphate receptor, type 1 isoform 1
           [Homo sapiens]
          Length = 2710

 Score = 27.3 bits (59), Expect = 5.5
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 21  PLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFC 67
           P SDKEK K+T E+V   LAR      F  + DL  + K   ++  C
Sbjct: 854 PFSDKEKNKLTFEVVN--LARNLIYFGFYNFSDLLRLTKILLAILDC 898


>gi|154354996 inositol 1,4,5-triphosphate receptor, type 1 isoform 2
           [Homo sapiens]
          Length = 2695

 Score = 27.3 bits (59), Expect = 5.5
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 21  PLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFC 67
           P SDKEK K+T E+V   LAR      F  + DL  + K   ++  C
Sbjct: 839 PFSDKEKNKLTFEVVN--LARNLIYFGFYNFSDLLRLTKILLAILDC 883


>gi|196114970 protein tyrosine phosphatase, non-receptor type 12
           isoform 3 [Homo sapiens]
          Length = 650

 Score = 26.9 bits (58), Expect = 7.1
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 95  GSVCELDIIFNFEKAYFILDEFLLGGEVQE--TSKKNVLKAIEQADLL 140
           G++C +D  +N  KA  I +EF +   +QE  T + + ++  EQ +L+
Sbjct: 109 GAICAIDYTWNLLKAGKIPEEFNVFNLIQEMRTQRHSAVQTKEQYELV 156


>gi|196114967 protein tyrosine phosphatase, non-receptor type 12
           isoform 2 [Homo sapiens]
          Length = 661

 Score = 26.9 bits (58), Expect = 7.1
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 95  GSVCELDIIFNFEKAYFILDEFLLGGEVQE--TSKKNVLKAIEQADLL 140
           G++C +D  +N  KA  I +EF +   +QE  T + + ++  EQ +L+
Sbjct: 120 GAICAIDYTWNLLKAGKIPEEFNVFNLIQEMRTQRHSAVQTKEQYELV 167


>gi|196114951 protein tyrosine phosphatase, non-receptor type 12
           isoform 1 [Homo sapiens]
          Length = 780

 Score = 26.9 bits (58), Expect = 7.1
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 95  GSVCELDIIFNFEKAYFILDEFLLGGEVQE--TSKKNVLKAIEQADLL 140
           G++C +D  +N  KA  I +EF +   +QE  T + + ++  EQ +L+
Sbjct: 239 GAICAIDYTWNLLKAGKIPEEFNVFNLIQEMRTQRHSAVQTKEQYELV 286


>gi|52218826 olfactory receptor, family 1, subfamily J, member 4
           [Homo sapiens]
          Length = 313

 Score = 26.9 bits (58), Expect = 7.1
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 43  PKMCSFLEWRDLKIVYKRYAS-LYFCCAIEDQDNELITLEIIHRYVEL 89
           PKM   ++ +D  I+Y    + +YF     D DN L+T     RYV +
Sbjct: 79  PKMLLSMQTQDQSILYAGCVTQMYFFIFFTDLDNFLLTSMAYDRYVAI 126


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.140    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,481,918
Number of Sequences: 37866
Number of extensions: 221171
Number of successful extensions: 572
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 546
Number of HSP's gapped (non-prelim): 32
length of query: 157
length of database: 18,247,518
effective HSP length: 94
effective length of query: 63
effective length of database: 14,688,114
effective search space: 925351182
effective search space used: 925351182
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.