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Search of human proteins with 219842303
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|219842303 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
(247 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|219842314 brain-derived neurotrophic factor isoform a preprop... 504 e-143
gi|219842312 brain-derived neurotrophic factor isoform a preprop... 504 e-143
gi|219842309 brain-derived neurotrophic factor isoform a preprop... 504 e-143
gi|219842306 brain-derived neurotrophic factor isoform a preprop... 504 e-143
gi|219842303 brain-derived neurotrophic factor isoform a preprop... 504 e-143
gi|219842300 brain-derived neurotrophic factor isoform a preprop... 504 e-143
gi|219842298 brain-derived neurotrophic factor isoform e [Homo s... 504 e-143
gi|219842296 brain-derived neurotrophic factor isoform d preprop... 504 e-143
gi|219842294 brain-derived neurotrophic factor isoform a preprop... 504 e-143
gi|219842292 brain-derived neurotrophic factor isoform a preprop... 504 e-143
gi|219842290 brain-derived neurotrophic factor isoform a preprop... 504 e-143
gi|219842288 brain-derived neurotrophic factor isoform a preprop... 504 e-143
gi|25306264 brain-derived neurotrophic factor isoform a prepropr... 504 e-143
gi|25306261 brain-derived neurotrophic factor isoform c prepropr... 504 e-143
gi|25306267 brain-derived neurotrophic factor isoform a prepropr... 504 e-143
gi|25306257 brain-derived neurotrophic factor isoform a prepropr... 504 e-143
gi|25306253 brain-derived neurotrophic factor isoform a prepropr... 504 e-143
gi|25306235 brain-derived neurotrophic factor isoform b prepropr... 504 e-143
gi|156630995 neurotrophin 3 isoform 1 preproprotein [Homo sapiens] 172 3e-43
gi|4505469 neurotrophin 3 isoform 2 preproprotein [Homo sapiens] 172 3e-43
gi|5453808 neurotrophin 5 preproprotein [Homo sapiens] 158 5e-39
gi|70995319 nerve growth factor, beta polypeptide precursor [Hom... 139 2e-33
gi|4507493 thrombopoietin precursor [Homo sapiens] 31 0.87
gi|13569960 interferon stimulated exonuclease gene 20kDa-like 2 ... 29 3.3
gi|218505703 von Willebrand factor A domain containing 3A [Homo ... 29 3.3
gi|223671925 hypothetical protein LOC222234 isoform 1 [Homo sapi... 28 5.6
gi|56118254 zinc finger protein 18 [Homo sapiens] 28 7.4
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens] 28 7.4
gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens] 28 7.4
gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens] 28 7.4
>gi|219842314 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 241 LTIKRGR 247
>gi|219842312 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 241 LTIKRGR 247
>gi|219842309 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 241 LTIKRGR 247
>gi|219842306 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 241 LTIKRGR 247
>gi|219842303 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 241 LTIKRGR 247
>gi|219842300 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 241 LTIKRGR 247
>gi|219842298 brain-derived neurotrophic factor isoform e [Homo
sapiens]
Length = 329
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 83 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 142
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 143 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 202
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 203 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 262
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 263 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 322
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 323 LTIKRGR 329
>gi|219842296 brain-derived neurotrophic factor isoform d
preproprotein [Homo sapiens]
Length = 276
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 30 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 89
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 90 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 149
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 150 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 209
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 210 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 269
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 270 LTIKRGR 276
>gi|219842294 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 241 LTIKRGR 247
>gi|219842292 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 241 LTIKRGR 247
>gi|219842290 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 241 LTIKRGR 247
>gi|219842288 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 241 LTIKRGR 247
>gi|25306264 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 241 LTIKRGR 247
>gi|25306261 brain-derived neurotrophic factor isoform c
preproprotein [Homo sapiens]
Length = 262
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 16 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 75
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 76 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 135
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 136 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 195
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 196 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 255
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 256 LTIKRGR 262
>gi|25306267 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 241 LTIKRGR 247
>gi|25306257 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 241 LTIKRGR 247
>gi|25306253 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 241 LTIKRGR 247
>gi|25306235 brain-derived neurotrophic factor isoform b
preproprotein [Homo sapiens]
Length = 255
Score = 504 bits (1297), Expect = e-143
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
Sbjct: 9 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 68
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
Sbjct: 69 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 128
Query: 121 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 180
NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY
Sbjct: 129 NMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQY 188
Query: 181 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 240
FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT
Sbjct: 189 FYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCT 248
Query: 241 LTIKRGR 247
LTIKRGR
Sbjct: 249 LTIKRGR 255
>gi|156630995 neurotrophin 3 isoform 1 preproprotein [Homo sapiens]
Length = 270
Score = 172 bits (435), Expect = 3e-43
Identities = 84/156 (53%), Positives = 110/156 (70%), Gaps = 3/156 (1%)
Query: 93 RVMLSSQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSD-PARRGELSVCDSISEWVTAA 151
RV+LS PLEPP L+L+E+Y AN + R +R+++ + RGE SVCDS S WVT
Sbjct: 116 RVLLSDSTPLEPPPLYLMEDYVGSPVVANRTSRRKRYAEHKSHRGEYSVCDSESLWVT-- 173
Query: 152 DKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTT 211
DK +A+D+ G VTVL ++ +KQYFYET+C K GCRGID +HWNSQC+T+
Sbjct: 174 DKSSAIDIRGHQVTVLGEIKTGNSPVKQYFYETRCKEARPVKNGCRGIDDKHWNSQCKTS 233
Query: 212 QSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIKRGR 247
Q+YVRALT ++ K +GWR+IRIDTSCVC L+ K GR
Sbjct: 234 QTYVRALTSENNKLVGWRWIRIDTSCVCALSRKIGR 269
>gi|4505469 neurotrophin 3 isoform 2 preproprotein [Homo sapiens]
Length = 257
Score = 172 bits (435), Expect = 3e-43
Identities = 84/156 (53%), Positives = 110/156 (70%), Gaps = 3/156 (1%)
Query: 93 RVMLSSQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSD-PARRGELSVCDSISEWVTAA 151
RV+LS PLEPP L+L+E+Y AN + R +R+++ + RGE SVCDS S WVT
Sbjct: 103 RVLLSDSTPLEPPPLYLMEDYVGSPVVANRTSRRKRYAEHKSHRGEYSVCDSESLWVT-- 160
Query: 152 DKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTT 211
DK +A+D+ G VTVL ++ +KQYFYET+C K GCRGID +HWNSQC+T+
Sbjct: 161 DKSSAIDIRGHQVTVLGEIKTGNSPVKQYFYETRCKEARPVKNGCRGIDDKHWNSQCKTS 220
Query: 212 QSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIKRGR 247
Q+YVRALT ++ K +GWR+IRIDTSCVC L+ K GR
Sbjct: 221 QTYVRALTSENNKLVGWRWIRIDTSCVCALSRKIGR 256
>gi|5453808 neurotrophin 5 preproprotein [Homo sapiens]
Length = 210
Score = 158 bits (399), Expect = 5e-39
Identities = 89/172 (51%), Positives = 115/172 (66%), Gaps = 14/172 (8%)
Query: 88 DLYTSRVMLSSQVPLEPPLLFLLEE--YKNYLDA-ANMSMRVRRHSDPA-RRGELSVCDS 143
DL + RV+LS P PPLLFLLE ++ A AN S R + PA RRGEL+VCD+
Sbjct: 40 DLLSPRVVLSRGAPAGPPLLFLLEAGAFRESAGAPANRSRRGVSETAPASRRGELAVCDA 99
Query: 144 ISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQ-LKQYFYETKCNP-------MGYTKEG 195
+S WVT D++TAVD+ G V VL +VP + G L+QYF+ET+C G G
Sbjct: 100 VSGWVT--DRRTAVDLRGREVEVLGEVPAAGGSPLRQYFFETRCKADNAEEGGPGAGGGG 157
Query: 196 CRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIKRGR 247
CRG+D+RHW S+C+ QSYVRALT D++ R+GWR+IRIDT+CVCTL + GR
Sbjct: 158 CRGVDRRHWVSECKAKQSYVRALTADAQGRVGWRWIRIDTACVCTLLSRTGR 209
>gi|70995319 nerve growth factor, beta polypeptide precursor [Homo
sapiens]
Length = 241
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
Query: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
Query: 121 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 178
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
Query: 179 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 238
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
Query: 239 CTLTIKRGR 247
C L+ K R
Sbjct: 231 CVLSRKAVR 239
>gi|4507493 thrombopoietin precursor [Homo sapiens]
Length = 353
Score = 31.2 bits (69), Expect = 0.87
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 89 LYTSRVMLSSQVPLEPPLLFLLEEYKN-YLDAANMSMRVRRHSDPARRGELSVCDSISEW 147
L T+R+ LSS P L L + ++ ++ + +S H P +V S+ EW
Sbjct: 13 LLTARLTLSSPAPPACDLRVLSKLLRDSHVLHSRLSQCPEVHPLPTPVLLPAVDFSLGEW 72
Query: 148 VTAADKKTAVDMSGGTVTVLEKVPVSKGQL 177
T ++ A D+ G +LE V ++GQL
Sbjct: 73 KTQMEETKAQDILGAVTLLLEGVMAARGQL 102
>gi|13569960 interferon stimulated exonuclease gene 20kDa-like 2
[Homo sapiens]
Length = 353
Score = 29.3 bits (64), Expect = 3.3
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 110 LEEYKNYLDAANM--SMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVL 167
L E + +L N S + HS+P+++GE D + + KKTA +G +
Sbjct: 34 LLERRGFLSKKNQPPSKAPKLHSEPSKKGETPTVDGTWKTPSFPKKKTAASSNGSGQPLD 93
Query: 168 EKVPVS 173
+K VS
Sbjct: 94 KKAAVS 99
>gi|218505703 von Willebrand factor A domain containing 3A [Homo
sapiens]
Length = 1184
Score = 29.3 bits (64), Expect = 3.3
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 109 LLEEYKNYLDAANMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLE 168
+LEE N + S ++ RH + + V +W+T KK + G V++L
Sbjct: 116 VLEEGTNVVQKICFSTQIIRHFESKLSDTIEVYQERIQWLTENSKKAFGLIKGARVSILI 175
Query: 169 KV-PVSKGQLKQYF 181
V +S G K+ F
Sbjct: 176 DVSAISSGPQKEEF 189
>gi|223671925 hypothetical protein LOC222234 isoform 1 [Homo
sapiens]
Length = 392
Score = 28.5 bits (62), Expect = 5.6
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 7 TMVISYFGCMKAAPMKEANIRGQGGLAYP-GVRTHGTLESVNGPKAGSRGLTSLADTFEH 65
T+ +S FG ++A +R L YP G R L +V G + G RGL L ++
Sbjct: 68 TLQVSPFGRLRARLPCHLAVRPLDPLTYPDGDRV---LVAVCGVEGGVRGLDGLQVKYDE 124
Query: 66 VIEELLDEDQKVRPNEENNKDADL 89
+EE+ + P +A L
Sbjct: 125 DLEEMAIVSDTIHPQASVEVNAPL 148
>gi|56118254 zinc finger protein 18 [Homo sapiens]
Length = 549
Score = 28.1 bits (61), Expect = 7.4
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 17/127 (13%)
Query: 37 VRTHGTLESVNGPKAGSRGLTS-------LADTFEHVIEEL--------LDEDQKVRPNE 81
+ T+G + S G LT+ LA + HV E++ E+ K N
Sbjct: 241 LETYGKMVSGAGISHPKSDLTNSIEFGEELAGIYLHVNEKIPRPTCIGDRQENDKENLNL 300
Query: 82 ENNKDADLYTSRVMLSSQVPLEPPL--LFLLEEYKNYLDAANMSMRVRRHSDPARRGELS 139
EN++D +L + S +VP + L F +E + + N+ ++ D +LS
Sbjct: 301 ENHRDQELLHASCQASGEVPSQASLRGFFTEDEPGCFGEGENLPEALQNIQDEGTGEQLS 360
Query: 140 VCDSISE 146
+ ISE
Sbjct: 361 PQERISE 367
>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
Length = 888
Score = 28.1 bits (61), Expect = 7.4
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 45 SVNGPKAGSR--GLTSLADTFEHVIEELLDEDQKVRPNE-ENNKDADLYTSRVML 96
S NG + S+ G S +D+ E+++EE L+ED KV+ + +N+ + ++ +S L
Sbjct: 42 SGNGSEDASKDSGEGSCSDSEENILEEELNEDIKVKEEQLKNSAEEEVLSSEKQL 96
>gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 28.1 bits (61), Expect = 7.4
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 34 YPGVRTHGTLESVNGPKAGSRGLTSLADTFEHVIEELLDEDQKVRPNEENNK 85
Y G ++ V S S+ + + V E +LDE +K +PN +K
Sbjct: 1858 YNSTELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDK 1909
>gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 28.1 bits (61), Expect = 7.4
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 34 YPGVRTHGTLESVNGPKAGSRGLTSLADTFEHVIEELLDEDQKVRPNEENNK 85
Y G ++ V S S+ + + V E +LDE +K +PN +K
Sbjct: 1858 YNSTELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDK 1909
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,227,900
Number of Sequences: 37866
Number of extensions: 384012
Number of successful extensions: 970
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 933
Number of HSP's gapped (non-prelim): 36
length of query: 247
length of database: 18,247,518
effective HSP length: 100
effective length of query: 147
effective length of database: 14,460,918
effective search space: 2125754946
effective search space used: 2125754946
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.