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Search of human proteins with 218563746
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|218563746 hypothetical protein LOC401124 [Homo sapiens]
(616 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|218563746 hypothetical protein LOC401124 [Homo sapiens] 1241 0.0
gi|188595682 ankyrin 2 isoform 3 [Homo sapiens] 62 2e-09
gi|52426737 ankyrin 2 isoform 2 [Homo sapiens] 62 2e-09
gi|32967599 ankyrin 3 isoform 2 [Homo sapiens] 60 6e-09
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens] 55 2e-07
gi|61742786 leucine rich repeat and death domain containing prot... 55 2e-07
gi|61742784 leucine rich repeat and death domain containing prot... 54 3e-07
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] 49 1e-05
gi|61742782 leucine rich repeat and death domain containing prot... 49 1e-05
gi|215598574 ankyrin 1 isoform 9 [Homo sapiens] 45 2e-04
gi|70780359 ankyrin 1 isoform 1 [Homo sapiens] 45 2e-04
gi|70780357 ankyrin 1 isoform 3 [Homo sapiens] 45 2e-04
gi|70780355 ankyrin 1 isoform 2 [Homo sapiens] 45 2e-04
gi|70780353 ankyrin 1 isoform 4 [Homo sapiens] 45 2e-04
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens] 32 2.3
gi|31543630 solute carrier family 20 (phosphate transporter), me... 31 2.9
gi|158341646 hypothetical protein LOC729830 [Homo sapiens] 30 5.0
gi|169213065 PREDICTED: similar to hCG1654128 [Homo sapiens] 30 6.6
gi|169213233 PREDICTED: similar to hCG1654128 [Homo sapiens] 30 6.6
gi|169212742 PREDICTED: similar to hCG1654128 [Homo sapiens] 30 6.6
gi|4505725 peroxin1 [Homo sapiens] 30 6.6
gi|4826686 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Homo sapiens] 30 8.6
gi|13128864 histone deacetylase 6 [Homo sapiens] 30 8.6
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens] 30 8.6
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens] 30 8.6
>gi|218563746 hypothetical protein LOC401124 [Homo sapiens]
Length = 616
Score = 1241 bits (3212), Expect = 0.0
Identities = 616/616 (100%), Positives = 616/616 (100%)
Query: 1 MCLEKRYLDVLSDVTGPQVSCYITAPSYVLQQLECRIINHMSSLIVGDNEELVSNVITIE 60
MCLEKRYLDVLSDVTGPQVSCYITAPSYVLQQLECRIINHMSSLIVGDNEELVSNVITIE
Sbjct: 1 MCLEKRYLDVLSDVTGPQVSCYITAPSYVLQQLECRIINHMSSLIVGDNEELVSNVITIE 60
Query: 61 CSDKEKRVPFPIGIAIPFTARYRGNYRDIMVKVCDINLQSSYLNPNSLEGMKGGYKGTCA 120
CSDKEKRVPFPIGIAIPFTARYRGNYRDIMVKVCDINLQSSYLNPNSLEGMKGGYKGTCA
Sbjct: 61 CSDKEKRVPFPIGIAIPFTARYRGNYRDIMVKVCDINLQSSYLNPNSLEGMKGGYKGTCA 120
Query: 121 SVKVYKLGIFSVVSCLKKESFTVTKKGLALKSSMDSRISLNYPPGVFTSPVLVQLKIQPV 180
SVKVYKLGIFSVVSCLKKESFTVTKKGLALKSSMDSRISLNYPPGVFTSPVLVQLKIQPV
Sbjct: 121 SVKVYKLGIFSVVSCLKKESFTVTKKGLALKSSMDSRISLNYPPGVFTSPVLVQLKIQPV 180
Query: 181 DPALVAHLKAQQDTFYSVQSTSPLIHIQHPSTYPFQKPVTLFLPCSPYLDKNNLGSEIDH 240
DPALVAHLKAQQDTFYSVQSTSPLIHIQHPSTYPFQKPVTLFLPCSPYLDKNNLGSEIDH
Sbjct: 181 DPALVAHLKAQQDTFYSVQSTSPLIHIQHPSTYPFQKPVTLFLPCSPYLDKNNLGSEIDH 240
Query: 241 KRRASATINRITPSYFNRTKIASIRKPRKNASECLKLLGFRSQDSGWCGLDDVVKTIQSG 300
KRRASATINRITPSYFNRTKIASIRKPRKNASECLKLLGFRSQDSGWCGLDDVVKTIQSG
Sbjct: 241 KRRASATINRITPSYFNRTKIASIRKPRKNASECLKLLGFRSQDSGWCGLDDVVKTIQSG 300
Query: 301 LVSVELYEHLERFIVLHLSSTMDNSHLVTFVKSLEEAMLSTTACIVLSHQKDNPHRIAVL 360
LVSVELYEHLERFIVLHLSSTMDNSHLVTFVKSLEEAMLSTTACIVLSHQKDNPHRIAVL
Sbjct: 301 LVSVELYEHLERFIVLHLSSTMDNSHLVTFVKSLEEAMLSTTACIVLSHQKDNPHRIAVL 360
Query: 361 VVPSKDLSQVLKDLHLEGFGGPPEPSRHFQVREGEQLLLRFTGNIFASSNGKDYGKDYTL 420
VVPSKDLSQVLKDLHLEGFGGPPEPSRHFQVREGEQLLLRFTGNIFASSNGKDYGKDYTL
Sbjct: 361 VVPSKDLSQVLKDLHLEGFGGPPEPSRHFQVREGEQLLLRFTGNIFASSNGKDYGKDYTL 420
Query: 421 IFHLQRKPRLELQIKEVDEFGNYSCPHYKGTIVVYKVPKGKIVPNLNQSLVINENHSQLP 480
IFHLQRKPRLELQIKEVDEFGNYSCPHYKGTIVVYKVPKGKIVPNLNQSLVINENHSQLP
Sbjct: 421 IFHLQRKPRLELQIKEVDEFGNYSCPHYKGTIVVYKVPKGKIVPNLNQSLVINENHSQLP 480
Query: 481 ICKLPLKLPKHKKLINRPQSTKRVSKDPVEALWDNLLHWLAEELSEENAESLSSTLPLRR 540
ICKLPLKLPKHKKLINRPQSTKRVSKDPVEALWDNLLHWLAEELSEENAESLSSTLPLRR
Sbjct: 481 ICKLPLKLPKHKKLINRPQSTKRVSKDPVEALWDNLLHWLAEELSEENAESLSSTLPLRR 540
Query: 541 STIQLIKLKNPDDLTEQIHEFLCFWKKSLPTFTDKLRLLARHLRKIGRSDLAEELKFKWE 600
STIQLIKLKNPDDLTEQIHEFLCFWKKSLPTFTDKLRLLARHLRKIGRSDLAEELKFKWE
Sbjct: 541 STIQLIKLKNPDDLTEQIHEFLCFWKKSLPTFTDKLRLLARHLRKIGRSDLAEELKFKWE 600
Query: 601 NKVFTEPQQCFDVAPE 616
NKVFTEPQQCFDVAPE
Sbjct: 601 NKVFTEPQQCFDVAPE 616
>gi|188595682 ankyrin 2 isoform 3 [Homo sapiens]
Length = 1863
Score = 62.0 bits (149), Expect = 2e-09
Identities = 127/588 (21%), Positives = 231/588 (39%), Gaps = 104/588 (17%)
Query: 46 VGDNEELVSNVITIECSDKEKRVPFPIGIAIPFTARYRGNYRDIMV-----------KVC 94
+ + E LVS ++ + + P+ + IP A RG R+++V C
Sbjct: 1044 LNEGESLVSRILQL--GPPGTKFLGPVIVEIPHFAALRGKERELVVLRSENGDSWKEHFC 1101
Query: 95 D---------INLQSSYLN-PNSLEGMKGGYKGTCASVKVYKLGIFSVVSCLKKESFTVT 144
D +N L+ P LE K C + F+VVS +K++S +
Sbjct: 1102 DYTEDELNEILNGMDEVLDSPEDLEK-----KRICRIITRDFPQYFAVVSRIKQDSNLIG 1156
Query: 145 KKGLALKSSMDSRISLNYPPGVFTSPVLVQLKIQPVDPALVAHLKAQQDTFYSVQSTSPL 204
+G L S++ ++ +P G T + V L+ QP+ LV + + TF SP+
Sbjct: 1157 PEGGVLSSTVVPQVQAVFPEGALTKRIRVGLQAQPMHSELVKKILGNKATF------SPI 1210
Query: 205 IHIQHPSTYPFQKPVTLFLP---CSPYLDKNNLGSEIDHKRRASATINRITPSYFNRTKI 261
+ ++ P F KP+T+ +P S + N G + R + TP+ +
Sbjct: 1211 VTLE-PRRRKFHKPITMTIPVPKASSDVMLNGFGGDAPTLRLLCSITGGTTPAQWEDITG 1269
Query: 262 ASIRKPRKNASECLKLLGFRSQDSGWCGLDDVVKTIQSGLVSVELYEHLERFIVLHLSST 321
+ P +EC + F + S L D + +S + ++Y E V +++
Sbjct: 1270 TT---PLTFVNEC---VSFTTNVSARFWLIDCRQIQESVTFASQVYR--EIICVPYMAK- 1320
Query: 322 MDNSHLVTFVKSLEEAMLSTTACIVLSHQKDNPHRIAVLVVPSKDLSQVLKDLHLEGFGG 381
V F KS + + + C ++ K + + ++ ++V +
Sbjct: 1321 -----FVVFAKS-HDPIEARLRCFCMTDDK-----VDKTLEQQENFAEVAR--------- 1360
Query: 382 PPEPSRHFQVREGEQLLLRFTGNIFASSNGKDYGKDYTLIFHLQRKPRLELQIKEVDEFG 441
SR +V EG+ + + GN+ + G+ + F ++ RL L +K V +
Sbjct: 1361 ----SRDVEVLEGKPIYVDCFGNLVPLTKS---GQHHIFSFFAFKENRLPLFVK-VRDTT 1412
Query: 442 NYSCPHYKGTIVVYKVPKGKIVPNLNQSLVINENHSQLPICKLPLKLPKHKKLINRPQ-- 499
C G + K PK + LV IC L + LP + K Q
Sbjct: 1413 QEPC----GRLSFMKEPKS------TRGLV------HQAICNLNITLPIYTKESESDQEQ 1456
Query: 500 ------STKRVSKDPVEALWDNLLHWLAEELSEENAESLSSTLPLRRSTIQLIKLKNPDD 553
++++ +D E + + L ++A+ L E L+ L I I+++NP+
Sbjct: 1457 EEEIDMTSEKNPQDEQERI-EERLAYIADHLGFSWTE-LARELDFTEEQIHQIRIENPNS 1514
Query: 554 LTEQIHEFLCFW-KKSLPTFTDKLRLLARHLRKIGRSDLAEELKFKWE 600
L +Q H L +W ++ TD L L KI R D+ ++ E
Sbjct: 1515 LQDQSHALLKYWLERDGKHATD--TNLVECLTKINRMDIVHLMETNTE 1560
>gi|52426737 ankyrin 2 isoform 2 [Homo sapiens]
Length = 1872
Score = 62.0 bits (149), Expect = 2e-09
Identities = 127/588 (21%), Positives = 231/588 (39%), Gaps = 104/588 (17%)
Query: 46 VGDNEELVSNVITIECSDKEKRVPFPIGIAIPFTARYRGNYRDIMV-----------KVC 94
+ + E LVS ++ + + P+ + IP A RG R+++V C
Sbjct: 1053 LNEGESLVSRILQL--GPPGTKFLGPVIVEIPHFAALRGKERELVVLRSENGDSWKEHFC 1110
Query: 95 D---------INLQSSYLN-PNSLEGMKGGYKGTCASVKVYKLGIFSVVSCLKKESFTVT 144
D +N L+ P LE K C + F+VVS +K++S +
Sbjct: 1111 DYTEDELNEILNGMDEVLDSPEDLEK-----KRICRIITRDFPQYFAVVSRIKQDSNLIG 1165
Query: 145 KKGLALKSSMDSRISLNYPPGVFTSPVLVQLKIQPVDPALVAHLKAQQDTFYSVQSTSPL 204
+G L S++ ++ +P G T + V L+ QP+ LV + + TF SP+
Sbjct: 1166 PEGGVLSSTVVPQVQAVFPEGALTKRIRVGLQAQPMHSELVKKILGNKATF------SPI 1219
Query: 205 IHIQHPSTYPFQKPVTLFLP---CSPYLDKNNLGSEIDHKRRASATINRITPSYFNRTKI 261
+ ++ P F KP+T+ +P S + N G + R + TP+ +
Sbjct: 1220 VTLE-PRRRKFHKPITMTIPVPKASSDVMLNGFGGDAPTLRLLCSITGGTTPAQWEDITG 1278
Query: 262 ASIRKPRKNASECLKLLGFRSQDSGWCGLDDVVKTIQSGLVSVELYEHLERFIVLHLSST 321
+ P +EC + F + S L D + +S + ++Y E V +++
Sbjct: 1279 TT---PLTFVNEC---VSFTTNVSARFWLIDCRQIQESVTFASQVYR--EIICVPYMAK- 1329
Query: 322 MDNSHLVTFVKSLEEAMLSTTACIVLSHQKDNPHRIAVLVVPSKDLSQVLKDLHLEGFGG 381
V F KS + + + C ++ K + + ++ ++V +
Sbjct: 1330 -----FVVFAKS-HDPIEARLRCFCMTDDK-----VDKTLEQQENFAEVAR--------- 1369
Query: 382 PPEPSRHFQVREGEQLLLRFTGNIFASSNGKDYGKDYTLIFHLQRKPRLELQIKEVDEFG 441
SR +V EG+ + + GN+ + G+ + F ++ RL L +K V +
Sbjct: 1370 ----SRDVEVLEGKPIYVDCFGNLVPLTKS---GQHHIFSFFAFKENRLPLFVK-VRDTT 1421
Query: 442 NYSCPHYKGTIVVYKVPKGKIVPNLNQSLVINENHSQLPICKLPLKLPKHKKLINRPQ-- 499
C G + K PK + LV IC L + LP + K Q
Sbjct: 1422 QEPC----GRLSFMKEPKS------TRGLV------HQAICNLNITLPIYTKESESDQEQ 1465
Query: 500 ------STKRVSKDPVEALWDNLLHWLAEELSEENAESLSSTLPLRRSTIQLIKLKNPDD 553
++++ +D E + + L ++A+ L E L+ L I I+++NP+
Sbjct: 1466 EEEIDMTSEKNPQDEQERI-EERLAYIADHLGFSWTE-LARELDFTEEQIHQIRIENPNS 1523
Query: 554 LTEQIHEFLCFW-KKSLPTFTDKLRLLARHLRKIGRSDLAEELKFKWE 600
L +Q H L +W ++ TD L L KI R D+ ++ E
Sbjct: 1524 LQDQSHALLKYWLERDGKHATD--TNLVECLTKINRMDIVHLMETNTE 1569
>gi|32967599 ankyrin 3 isoform 2 [Homo sapiens]
Length = 1001
Score = 60.1 bits (144), Expect = 6e-09
Identities = 117/517 (22%), Positives = 200/517 (38%), Gaps = 106/517 (20%)
Query: 130 FSVVSCLKKESFTVTKKGLALKSSMDSRISLNYPPGVFTSPVLVQLKIQPVDPALVAHLK 189
F+VVS +K+ES + +G L S+ + ++P G T + V L+ QPV +V +
Sbjct: 268 FAVVSRIKQESNQIGPEGGILSSTTVPLVQASFPEGALTKRIRVGLQAQPVPDEIVKKIL 327
Query: 190 AQQDTFYSVQSTSPLIHIQHPSTYPFQKPVTLFLPCSPYLDKNNLGSEIDHKRRASATIN 249
+ TF SP++ ++ P F KP+T+ +P P G + + + T N
Sbjct: 328 GNKATF------SPIVTVE-PRRRKFHKPITMTIPVPP-----PSGEGVSNGYKGDTTPN 375
Query: 250 -RITPSYFNRTKIASIR-----KPRKNASECLKLLGFRSQDSGWCGLDDVVKTIQSGLVS 303
R+ S T A P +C + F + S L D + +++ ++
Sbjct: 376 LRLLCSITGGTSPAQWEDITGTTPLTFIKDC---VSFTTNVSARFWLADCHQVLETVGLA 432
Query: 304 VELYEHLERFIVLHLSSTMDNSHLVTFVKSLEEAMLSTTACIVLSHQKDNPHRIAVLVVP 363
+LY L V +++ V F K + + + S+ C ++ K + +
Sbjct: 433 TQLYREL--ICVPYMAK------FVVFAK-MNDPVESSLRCFCMTDDK-----VDKTLEQ 478
Query: 364 SKDLSQVLKDLHLEGFGGPPEPSRHFQVREGEQLLLRFTGNIFASSNGKDYGKDYTLIFH 423
++ +V + S+ +V EG+ + + GN+ + G G+ F+
Sbjct: 479 QENFEEVAR-------------SKDIEVLEGKPIYVDCYGNLAPLTKG---GQQLVFNFY 522
Query: 424 LQRKPRLELQIKEVDEFGNYSCPHYKGTIVVYKVPKGKIVPNLNQSLVINENHSQLPICK 483
++ RL IK + + C G + K PK + Q +C
Sbjct: 523 SFKENRLPFSIK-IRDTSQEPC----GRLSFLKEPK------------TTKGLPQTAVCN 565
Query: 484 LPLKLPKHKKL--INRPQS------TKRVS---------KDPVEALWDNLLHWLAEELSE 526
L + LP HKK+ +R QS KR S + P E D + +A+ L
Sbjct: 566 LNITLPAHKKIEKTDRRQSFASLALRKRYSYLTEPGMSPQSPCERT-DIRMAIVADHLGL 624
Query: 527 ENAESLSSTLPLRRSTIQLIKLKNPDDLTEQIHEFLCFW--KKSLPTFTDKLRLLARHLR 584
E L+ L I I+++NP+ L Q L W + TD L + L
Sbjct: 625 SWTE-LARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALTSV---LT 680
Query: 585 KIGRSDLAEELK--------------FKWENKVFTEP 607
KI R D+ L+ F EN VF +P
Sbjct: 681 KINRIDIVTLLEGPIFDYGNISGTRSFADENNVFHDP 717
>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
Length = 4377
Score = 55.1 bits (131), Expect = 2e-07
Identities = 80/370 (21%), Positives = 147/370 (39%), Gaps = 68/370 (18%)
Query: 130 FSVVSCLKKESFTVTKKGLALKSSMDSRISLNYPPGVFTSPVLVQLKIQPVDPALVAHLK 189
F+VVS +K+ES + +G L S+ + ++P G T + V L+ QPV +V +
Sbjct: 1134 FAVVSRIKQESNQIGPEGGILSSTTVPLVQASFPEGALTKRIRVGLQAQPVPDEIVKKIL 1193
Query: 190 AQQDTFYSVQSTSPLIHIQHPSTYPFQKPVTLFLPCSPYLDKNNLGSEIDHKRRASATIN 249
+ TF SP++ ++ P F KP+T+ +P P G + + + T N
Sbjct: 1194 GNKATF------SPIVTVE-PRRRKFHKPITMTIPVPP-----PSGEGVSNGYKGDTTPN 1241
Query: 250 -RITPSYFNRTKIASIR-----KPRKNASECLKLLGFRSQDSGWCGLDDVVKTIQSGLVS 303
R+ S T A P +C + F + S L D + +++ ++
Sbjct: 1242 LRLLCSITGGTSPAQWEDITGTTPLTFIKDC---VSFTTNVSARFWLADCHQVLETVGLA 1298
Query: 304 VELYEHLERFIVLHLSSTMDNSHLVTFVKSLEEAMLSTTACIVLSHQKDNPHRIAVLVVP 363
+LY L V +++ V F K + + + S+ C ++ K + +
Sbjct: 1299 TQLYREL--ICVPYMAK------FVVFAK-MNDPVESSLRCFCMTDDK-----VDKTLEQ 1344
Query: 364 SKDLSQVLKDLHLEGFGGPPEPSRHFQVREGEQLLLRFTGNIFASSNGKDYGKDYTLIFH 423
++ +V + S+ +V EG+ + + GN+ + G G+ F+
Sbjct: 1345 QENFEEVAR-------------SKDIEVLEGKPIYVDCYGNLAPLTKG---GQQLVFNFY 1388
Query: 424 LQRKPRLELQIKEVDEFGNYSCPHYKGTIVVYKVPKGKIVPNLNQSLVINENHSQLPICK 483
++ RL IK + + C G + K PK + Q +C
Sbjct: 1389 SFKENRLPFSIK-IRDTSQEPC----GRLSFLKEPK------------TTKGLPQTAVCN 1431
Query: 484 LPLKLPKHKK 493
L + LP HKK
Sbjct: 1432 LNITLPAHKK 1441
>gi|61742786 leucine rich repeat and death domain containing protein
isoform 3 [Homo sapiens]
Length = 893
Score = 54.7 bits (130), Expect = 2e-07
Identities = 127/573 (22%), Positives = 216/573 (37%), Gaps = 111/573 (19%)
Query: 46 VGDNEELVSNVITIECSDKEKRVPFP--IGIAIPFTARYRGNYRDIMVKVCDINLQS--- 100
+G ++ L+S+V+ ++ V F +G+ + FT R+++V+ + N
Sbjct: 370 LGPHDALLSHVLELQ----PHGVAFQQDVGLWLLFTPPQARRCREVVVRTRNDNSWGDLE 425
Query: 101 SYLNPNSLEGMKGGYKGTCASVKVYKLGIFSVVSCLKKESFTVTKKGLALKSSMDSRISL 160
+YL + + + A +V F VVS + V +G L SS + +
Sbjct: 426 TYLEEEAPQRL-------WAHCQVPHFSWFLVVSRPVSNACLVPPEGTLLCSSGHPGVKV 478
Query: 161 NYPPGVFTSPVLVQLKIQPVDPALVAHLKAQQDTFYSVQSTSPLIHIQHPSTYPFQKPVT 220
+PPG P V +++ + + L + + + SPL+ + F +PVT
Sbjct: 479 IFPPGATEEPRRVSMQVVRMAGRELQALLGEPEA-----AVSPLLCLSQSGPPSFLQPVT 533
Query: 221 LFLPCSPYLDKNNLGSEIDHKRRASATINRITPSYFNRTKIASIRKPRKNASECLKLLGF 280
+ LP L G +D R L LL +
Sbjct: 534 VQLP----LPSGITGLSLDRSR--------------------------------LHLLYW 557
Query: 281 RSQDSGWCGLDDVVKTIQSGLVSVELYEHLERFIVLHLS-----STMDNSHLVTFVKSLE 335
+ W DD+ + V +EL RF V H S T N K+ E
Sbjct: 558 APPAATW---DDI-----TAQVVLELTHLYARFQVTHFSWYWLWYTTKNCVGGLARKAWE 609
Query: 336 EAMLSTTACIVLSHQKDNPHRIAVLVVPSKDLSQVLKDLHLEGFGGPPEPSRHFQVREGE 395
L I L ++D P ++ + +P + L+ L LE + GP EPS ++ EGE
Sbjct: 610 RLRLHRVNLIALQRRRD-PEQVLLQCLPRNKVDATLRRL-LERYRGP-EPSDTVEMFEGE 666
Query: 396 QLLLRFTGNIFASSNGKDYGKD-YTLIFHLQRKPRLELQIKEVDEFGNYSCPHYKGTIVV 454
+ F I ++ D + +F+ K +KEV Y+G + V
Sbjct: 667 EFFAAFERGIDVDADRPDCVEGRICFVFYSHLK-----NVKEVS--------FYRGAVPV 713
Query: 455 YKVPKGKIVPNLNQSLVINENHSQLPICKLPLKLPKHKKLINRPQSTKRVSKDPVEALWD 514
VP ++ + L + LP+KLP+ + P+ +S P+
Sbjct: 714 R-------VPEEAEAARQRKGADALWMATLPIKLPRLRGS-EGPRRGAGLSLAPL----- 760
Query: 515 NLLHWLAEELSEENAESLSSTLPL-----------RRSTIQLIKLKNPDDLTEQIHEFLC 563
NL L++ N S++ L L +Q I+ + DDL EQI L
Sbjct: 761 NLGDAETGFLTQSNLLSVAGRLGLDWPAVALHLGVSYREVQRIRHEFRDDLDEQIRHMLF 820
Query: 564 FWKKSLPTFTDKLRLLARHLRKIGRSDLAEELK 596
W + + LL + L + R D+AEE++
Sbjct: 821 SWAERQAGQPGAVGLLVQALEQSDRQDVAEEVR 853
>gi|61742784 leucine rich repeat and death domain containing protein
isoform 1 [Homo sapiens]
Length = 910
Score = 54.3 bits (129), Expect = 3e-07
Identities = 124/573 (21%), Positives = 216/573 (37%), Gaps = 94/573 (16%)
Query: 46 VGDNEELVSNVITIECSDKEKRVPFP--IGIAIPFTARYRGNYRDIMVKVCDINLQS--- 100
+G ++ L+S+V+ ++ V F +G+ + FT R+++V+ + N
Sbjct: 370 LGPHDALLSHVLELQ----PHGVAFQQDVGLWLLFTPPQARRCREVVVRTRNDNSWGDLE 425
Query: 101 SYLNPNSLEGMKGGYKGTCASVKVYKLGIFSVVSCLKKESFTVTKKGLALKSSMDSRISL 160
+YL + + + A +V F VVS + V +G L SS + +
Sbjct: 426 TYLEEEAPQRL-------WAHCQVPHFSWFLVVSRPVSNACLVPPEGTLLCSSGHPGVKV 478
Query: 161 NYPPGVFTSPVLVQLKIQPVDPALVAHLKAQQDTFYSVQSTSPLIHIQHPSTYPFQKPVT 220
+PPG P V +++ + + L + + + SPL+ + F +PVT
Sbjct: 479 IFPPGATEEPRRVSMQVVRMAGRELQALLGEPEA-----AVSPLLCLSQSGPPSFLQPVT 533
Query: 221 LFLPCSPYLDKNNLGSEIDHKRRASATINRITPSYFNRTKIASIRKPRKNASECLKLLGF 280
+ LP L G +D R L LL +
Sbjct: 534 VQLP----LPSGITGLSLDRSR--------------------------------LHLLYW 557
Query: 281 RSQDSGWCGLDDVVKTIQSGLVSVELYEHLERFIVLHLS-----STMDNSHLVTFVKSLE 335
+ W DD+ + V +EL RF V H S T N K+ E
Sbjct: 558 APPAATW---DDI-----TAQVVLELTHLYARFQVTHFSWYWLWYTTKNCVGGLARKAWE 609
Query: 336 EAMLSTTACIVLSHQKDNPHRIAVLVVPSKDLSQVLKDLHLEGFGGPPEPSRHFQVREGE 395
L I L ++D P ++ + +P + L+ L LE + GP EPS ++ EGE
Sbjct: 610 RLRLHRVNLIALQRRRD-PEQVLLQCLPRNKVDATLRRL-LERYRGP-EPSDTVEMFEGE 666
Query: 396 QLLLRFTGNIFASSNGKDYGKD-YTLIFHLQRKPRLELQIKEVDEFGNYSCPHYKGTIVV 454
+ F I ++ D + +F+ K E+ + + +G +
Sbjct: 667 EFFAAFERGIDVDADRPDCVEGRICFVFYSHLKNVKEVYVTTTLD---REAQAVRGQVSF 723
Query: 455 YKVPKGKIVPNLNQSLVINENHSQLPICKLPLKLPKHKKLINRPQSTKRVSKDPVEALWD 514
Y+ VP ++ + L + LP+KLP+ + P+ +S P+
Sbjct: 724 YRGAVPVRVPEEAEAARQRKGADALWMATLPIKLPRLRGS-EGPRRGAGLSLAPL----- 777
Query: 515 NLLHWLAEELSEENAESLSSTLPL-----------RRSTIQLIKLKNPDDLTEQIHEFLC 563
NL L++ N S++ L L +Q I+ + DDL EQI L
Sbjct: 778 NLGDAETGFLTQSNLLSVAGRLGLDWPAVALHLGVSYREVQRIRHEFRDDLDEQIRHMLF 837
Query: 564 FWKKSLPTFTDKLRLLARHLRKIGRSDLAEELK 596
W + + LL + L + R D+AEE++
Sbjct: 838 SWAERQAGQPGAVGLLVQALEQSDRQDVAEEVR 870
>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
Length = 3957
Score = 49.3 bits (116), Expect = 1e-05
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 35/200 (17%)
Query: 46 VGDNEELVSNVITIECSDKEKRVPFPIGIAIPFTARYRGNYRDIMV-----------KVC 94
+ + E LVS ++ + + P+ + IP A RG R+++V C
Sbjct: 1053 LNEGESLVSRILQL--GPPGTKFLGPVIVEIPHFAALRGKERELVVLRSENGDSWKEHFC 1110
Query: 95 D---------INLQSSYLN-PNSLEGMKGGYKGTCASVKVYKLGIFSVVSCLKKESFTVT 144
D +N L+ P LE K C + F+VVS +K++S +
Sbjct: 1111 DYTEDELNEILNGMDEVLDSPEDLEK-----KRICRIITRDFPQYFAVVSRIKQDSNLIG 1165
Query: 145 KKGLALKSSMDSRISLNYPPGVFTSPVLVQLKIQPVDPALVAHLKAQQDTFYSVQSTSPL 204
+G L S++ ++ +P G T + V L+ QP+ LV + + TF SP+
Sbjct: 1166 PEGGVLSSTVVPQVQAVFPEGALTKRIRVGLQAQPMHSELVKKILGNKATF------SPI 1219
Query: 205 IHIQHPSTYPFQKPVTLFLP 224
+ ++ P F KP+T+ +P
Sbjct: 1220 VTLE-PRRRKFHKPITMTIP 1238
>gi|61742782 leucine rich repeat and death domain containing protein
isoform 2 [Homo sapiens]
Length = 753
Score = 48.9 bits (115), Expect = 1e-05
Identities = 122/568 (21%), Positives = 212/568 (37%), Gaps = 95/568 (16%)
Query: 46 VGDNEELVSNVITIECSDKEKRVPFP--IGIAIPFTARYRGNYRDIMVKVCDINLQS--- 100
+G ++ L+S+V+ ++ V F +G+ + FT R+++V+ + N
Sbjct: 224 LGPHDALLSHVLELQ----PHGVAFQQDVGLWLLFTPPQARRCREVVVRTRNDNSWGDLE 279
Query: 101 SYLNPNSLEGMKGGYKGTCASVKVYKLGIFSVVSCLKKESFTVTKKGLALKSSMDSRISL 160
+YL + + + A +V F VVS + V +G L SS + +
Sbjct: 280 TYLEEEAPQRL-------WAHCQVPHFSWFLVVSRPVSNACLVPPEGTLLCSSGHPGVKV 332
Query: 161 NYPPGVFTSPVLVQLKIQPVDPALVAHLKAQQDTFYSVQSTSPLIHIQHPSTYPFQKPVT 220
+PPG P V +++ + + L + + + SPL+ + F +PVT
Sbjct: 333 IFPPGATEEPRRVSMQVVRMAGRELQALLGEPEA-----AVSPLLCLSQSGPPSFLQPVT 387
Query: 221 LFLPCSPYLDKNNLGSEIDHKRRASATINRITPSYFNRTKIASIRKPRKNASECLKLLGF 280
+ LP L G +D R L LL +
Sbjct: 388 VQLP----LPSGITGLSLDRSR--------------------------------LHLLYW 411
Query: 281 RSQDSGWCGLDDVVKTIQSGLVSVELYEHLERFIVLHLSSTMDNSHLVTFVKSLEEAMLS 340
+ W DD+ T Q L LY L T N K+ E L
Sbjct: 412 APPAATW---DDI--TAQVVLELTHLY---------WLWYTTKNCVGGLARKAWERLRLH 457
Query: 341 TTACIVLSHQKDNPHRIAVLVVPSKDLSQVLKDLHLEGFGGPPEPSRHFQVREGEQLLLR 400
I L ++D P ++ + +P + L+ L LE + GP EPS ++ EGE+
Sbjct: 458 RVNLIALQRRRD-PEQVLLQCLPRNKVDATLRRL-LERYRGP-EPSDTVEMFEGEEFFAA 514
Query: 401 FTGNIFASSNGKDYGKD-YTLIFHLQRKPRLELQIKEVDEFGNYSCPHYKGTIVVYKVPK 459
F I ++ D + +F+ K E+ + + +G + Y+
Sbjct: 515 FERGIDVDADRPDCVEGRICFVFYSHLKNVKEVYVTTTLD---REAQAVRGQVSFYRGAV 571
Query: 460 GKIVPNLNQSLVINENHSQLPICKLPLKLPKHKKLINRPQSTKRVSKDPVEALWDNLLHW 519
VP ++ + L + LP+KLP+ + P+ +S P+ NL
Sbjct: 572 PVRVPEEAEAARQRKGADALWMATLPIKLPRLRGS-EGPRRGAGLSLAPL-----NLGDA 625
Query: 520 LAEELSEENAESLSSTLPL-----------RRSTIQLIKLKNPDDLTEQIHEFLCFWKKS 568
L++ N S++ L L +Q I+ + DDL EQI L W +
Sbjct: 626 ETGFLTQSNLLSVAGRLGLDWPAVALHLGVSYREVQRIRHEFRDDLDEQIRHMLFSWAER 685
Query: 569 LPTFTDKLRLLARHLRKIGRSDLAEELK 596
+ LL + L + R D+AEE++
Sbjct: 686 QAGQPGAVGLLVQALEQSDRQDVAEEVR 713
>gi|215598574 ankyrin 1 isoform 9 [Homo sapiens]
Length = 1897
Score = 45.1 bits (105), Expect = 2e-04
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 80 ARYRGNYRDIMVKVCDINLQSSYLNPNSLEGMKGGYKGTCASVKVYKLGIFSVVSCLKKE 139
+RY +Y D ++ D L SLE ++ K C + F ++S L ++
Sbjct: 1063 SRYGESYLDQILNGMDEEL-------GSLEELEK--KRVCRIITTDFPLYFVIMSRLCQD 1113
Query: 140 SFTVTKKGLALKSSMDSRISLNYPPGVFTSPVLVQLKIQPVDPALVAHLKAQQDTFYSVQ 199
T+ +G +LKS + + +P T V + L+ QPV LV L Q TF
Sbjct: 1114 YDTIGPEGGSLKSKLVPLVQATFPENAVTKRVKLALQAQPVPDELVTKLLGNQATF---- 1169
Query: 200 STSPLIHIQHPSTYPFQKPVTLFLPCSP 227
SP++ ++ P F +P+ L +P P
Sbjct: 1170 --SPIVTVE-PRRRKFHRPIGLRIPLPP 1194
>gi|70780359 ankyrin 1 isoform 1 [Homo sapiens]
Length = 1881
Score = 45.1 bits (105), Expect = 2e-04
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 80 ARYRGNYRDIMVKVCDINLQSSYLNPNSLEGMKGGYKGTCASVKVYKLGIFSVVSCLKKE 139
+RY +Y D ++ D L SLE ++ K C + F ++S L ++
Sbjct: 1022 SRYGESYLDQILNGMDEEL-------GSLEELEK--KRVCRIITTDFPLYFVIMSRLCQD 1072
Query: 140 SFTVTKKGLALKSSMDSRISLNYPPGVFTSPVLVQLKIQPVDPALVAHLKAQQDTFYSVQ 199
T+ +G +LKS + + +P T V + L+ QPV LV L Q TF
Sbjct: 1073 YDTIGPEGGSLKSKLVPLVQATFPENAVTKRVKLALQAQPVPDELVTKLLGNQATF---- 1128
Query: 200 STSPLIHIQHPSTYPFQKPVTLFLPCSP 227
SP++ ++ P F +P+ L +P P
Sbjct: 1129 --SPIVTVE-PRRRKFHRPIGLRIPLPP 1153
>gi|70780357 ankyrin 1 isoform 3 [Homo sapiens]
Length = 1880
Score = 45.1 bits (105), Expect = 2e-04
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 80 ARYRGNYRDIMVKVCDINLQSSYLNPNSLEGMKGGYKGTCASVKVYKLGIFSVVSCLKKE 139
+RY +Y D ++ D L SLE ++ K C + F ++S L ++
Sbjct: 1022 SRYGESYLDQILNGMDEEL-------GSLEELEK--KRVCRIITTDFPLYFVIMSRLCQD 1072
Query: 140 SFTVTKKGLALKSSMDSRISLNYPPGVFTSPVLVQLKIQPVDPALVAHLKAQQDTFYSVQ 199
T+ +G +LKS + + +P T V + L+ QPV LV L Q TF
Sbjct: 1073 YDTIGPEGGSLKSKLVPLVQATFPENAVTKRVKLALQAQPVPDELVTKLLGNQATF---- 1128
Query: 200 STSPLIHIQHPSTYPFQKPVTLFLPCSP 227
SP++ ++ P F +P+ L +P P
Sbjct: 1129 --SPIVTVE-PRRRKFHRPIGLRIPLPP 1153
>gi|70780355 ankyrin 1 isoform 2 [Homo sapiens]
Length = 1719
Score = 45.1 bits (105), Expect = 2e-04
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 80 ARYRGNYRDIMVKVCDINLQSSYLNPNSLEGMKGGYKGTCASVKVYKLGIFSVVSCLKKE 139
+RY +Y D ++ D L SLE ++ K C + F ++S L ++
Sbjct: 1022 SRYGESYLDQILNGMDEEL-------GSLEELEK--KRVCRIITTDFPLYFVIMSRLCQD 1072
Query: 140 SFTVTKKGLALKSSMDSRISLNYPPGVFTSPVLVQLKIQPVDPALVAHLKAQQDTFYSVQ 199
T+ +G +LKS + + +P T V + L+ QPV LV L Q TF
Sbjct: 1073 YDTIGPEGGSLKSKLVPLVQATFPENAVTKRVKLALQAQPVPDELVTKLLGNQATF---- 1128
Query: 200 STSPLIHIQHPSTYPFQKPVTLFLPCSP 227
SP++ ++ P F +P+ L +P P
Sbjct: 1129 --SPIVTVE-PRRRKFHRPIGLRIPLPP 1153
>gi|70780353 ankyrin 1 isoform 4 [Homo sapiens]
Length = 1856
Score = 45.1 bits (105), Expect = 2e-04
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 80 ARYRGNYRDIMVKVCDINLQSSYLNPNSLEGMKGGYKGTCASVKVYKLGIFSVVSCLKKE 139
+RY +Y D ++ D L SLE ++ K C + F ++S L ++
Sbjct: 1022 SRYGESYLDQILNGMDEEL-------GSLEELEK--KRVCRIITTDFPLYFVIMSRLCQD 1072
Query: 140 SFTVTKKGLALKSSMDSRISLNYPPGVFTSPVLVQLKIQPVDPALVAHLKAQQDTFYSVQ 199
T+ +G +LKS + + +P T V + L+ QPV LV L Q TF
Sbjct: 1073 YDTIGPEGGSLKSKLVPLVQATFPENAVTKRVKLALQAQPVPDELVTKLLGNQATF---- 1128
Query: 200 STSPLIHIQHPSTYPFQKPVTLFLPCSP 227
SP++ ++ P F +P+ L +P P
Sbjct: 1129 --SPIVTVE-PRRRKFHRPIGLRIPLPP 1153
>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 31.6 bits (70), Expect = 2.3
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 397 LLLRFTGNIFASSNGKDYGKDYTLIFHLQRKPRLELQIKEV---DEFGNYSCPHYKGT-- 451
LLLRF N F+ S G D+ + +++LQI + + F + +Y+GT
Sbjct: 24 LLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHG 83
Query: 452 -IVVYKVPKGKIVPNLNQSL-VINEN 475
IVVY V + N+ + L IN+N
Sbjct: 84 VIVVYDVTSAESFVNVKRWLHEINQN 109
>gi|31543630 solute carrier family 20 (phosphate transporter),
member 1 [Homo sapiens]
Length = 679
Score = 31.2 bits (69), Expect = 2.9
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 293 VVKTIQSGLVSVELYEHLERFIVLHLSSTMDNSHLVTFVKSLEEAMLSTTACIV 346
V +TI+ GL+ VE+Y + ++ S M S + V S + +S T CIV
Sbjct: 81 VSETIRKGLIDVEMYNSTQGLLMAGSVSAMFGSAVWQLVASFLKLPISGTHCIV 134
>gi|158341646 hypothetical protein LOC729830 [Homo sapiens]
Length = 1040
Score = 30.4 bits (67), Expect = 5.0
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 24/107 (22%)
Query: 330 FVKSLEEAMLSTTACIVLSHQKDNPHRIAVLVVPSKDLSQV------------------- 370
F++SL E ++AC V + P + + P KD SQ
Sbjct: 535 FLQSLTEEGSVSSACPVFGLPQQLPRKTGPQLAPRKDKSQTELEWDDSYDTGISSGADVG 594
Query: 371 ----LKDLHLEGFGGPPEPSRHFQVREGEQLLLRFTGNIFASSNGKD 413
DL + G P +P +H Q + LLL F G+ S+ +D
Sbjct: 595 SPGPYDDLEVSGPPAPIDPPKHIQEMKKNALLL-FKGSYIEESDFQD 640
>gi|169213065 PREDICTED: similar to hCG1654128 [Homo sapiens]
Length = 851
Score = 30.0 bits (66), Expect = 6.6
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 478 QLPICKLPLKLPKHKKLINRPQSTKRVSKDPVEA-LWDNLLHWLAEEL 524
++P+ K P+++PK K L P + K P++A LW +L + EL
Sbjct: 765 EVPLWKSPVEVPKWKSLYGSPTVEVPLWKSPMKAPLWKSLYESFSMEL 812
>gi|169213233 PREDICTED: similar to hCG1654128 [Homo sapiens]
Length = 1070
Score = 30.0 bits (66), Expect = 6.6
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 478 QLPICKLPLKLPKHKKLINRPQSTKRVSKDPVEA-LWDNLLHWLAEEL 524
++P+ K P+++PK K L P + K P++A LW +L + EL
Sbjct: 984 EVPLWKSPVEVPKWKSLYGSPTVEVPLWKSPMKAPLWKSLYESFSMEL 1031
>gi|169212742 PREDICTED: similar to hCG1654128 [Homo sapiens]
Length = 1015
Score = 30.0 bits (66), Expect = 6.6
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 478 QLPICKLPLKLPKHKKLINRPQSTKRVSKDPVEA-LWDNLLHWLAEEL 524
++P+ K P+++PK K L P + K P++A LW +L + EL
Sbjct: 929 EVPLWKSPVEVPKWKSLYGSPTVEVPLWKSPMKAPLWKSLYESFSMEL 976
>gi|4505725 peroxin1 [Homo sapiens]
Length = 1283
Score = 30.0 bits (66), Expect = 6.6
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 14/122 (11%)
Query: 448 YKGTIVVYKVPKGKIVPNLNQSLVINENHSQLPICKLPL--KLPKHKKLINRPQSTKRVS 505
Y + V + K I +L + L I E H+ + I + + K+P+ KL R K +S
Sbjct: 400 YTKNVEVLHLGKVWIPDDLRKRLNI-EMHAVVRITPVEVTPKIPRSLKLQPRENLPKDIS 458
Query: 506 KDPVEALWDNLLHWLAEELSEENAESLSSTLPLRRSTIQLIKLKNPDDLTEQIHEFLCFW 565
++ ++ ++ + WL + S ++ LPL S + IKL+ D L E + W
Sbjct: 459 EEDIKTVFYS---WLQQ--------STTTMLPLVISEEEFIKLETKDGLKEFSLSIVHSW 507
Query: 566 KK 567
+K
Sbjct: 508 EK 509
>gi|4826686 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Homo sapiens]
Length = 740
Score = 29.6 bits (65), Expect = 8.6
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 378 GFGGPPEPSRHFQVRE-GEQLLLRFT---------GNIFASSNGKDYGKDYTLIFHLQRK 427
GFGG + S + Q GE+ + T G++ S NGKD G + + H++ +
Sbjct: 166 GFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQ 225
Query: 428 ---PRLELQIKEVD-EFG--NYSCPHYKGTIVVYKVPKGKIV 463
P L+ E+ FG + P G + + K P G IV
Sbjct: 226 ALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267
>gi|13128864 histone deacetylase 6 [Homo sapiens]
Length = 1215
Score = 29.6 bits (65), Expect = 8.6
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 554 LTEQIHEFLCFWKKSLPTFTDKLRLLARHLRKIGRSDLAEELKFKWENK 602
L EQ++EF C W S P ++L + L + G D + ++ K
Sbjct: 90 LDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEK 138
>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
Length = 1337
Score = 29.6 bits (65), Expect = 8.6
Identities = 35/147 (23%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 204 LIHIQHPSTYPFQKPVTLFLPCSPYLDKNNLGSEIDHKRRASATINRITPSYFNRTKIAS 263
L+H+ Y FQ L L + N G DH R + + P Y +R K+
Sbjct: 839 LMHLDKLIGYTFQDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDR-KVHH 897
Query: 264 IRKPRKNASECLKLLGFRSQDSGWCGLDDVVKTIQSGLVSVELYEHLERFIVLHLSSTMD 323
+ +K + + ++ QD S + E E L +V L+S
Sbjct: 898 MHMRKKGINTLINIMSRLGQDD----------PTPSRINHNERLEFLGDAVVEFLTSV-- 945
Query: 324 NSHLVTFVKSLEEAMLSTTACIVLSHQ 350
HL SLEE L+T ++ +Q
Sbjct: 946 --HLYYLFPSLEEGGLATYRTAIVQNQ 970
>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
Length = 1374
Score = 29.6 bits (65), Expect = 8.6
Identities = 35/147 (23%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 204 LIHIQHPSTYPFQKPVTLFLPCSPYLDKNNLGSEIDHKRRASATINRITPSYFNRTKIAS 263
L+H+ Y FQ L L + N G DH R + + P Y +R K+
Sbjct: 876 LMHLDKLIGYTFQDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDR-KVHH 934
Query: 264 IRKPRKNASECLKLLGFRSQDSGWCGLDDVVKTIQSGLVSVELYEHLERFIVLHLSSTMD 323
+ +K + + ++ QD S + E E L +V L+S
Sbjct: 935 MHMRKKGINTLINIMSRLGQDD----------PTPSRINHNERLEFLGDAVVEFLTSV-- 982
Query: 324 NSHLVTFVKSLEEAMLSTTACIVLSHQ 350
HL SLEE L+T ++ +Q
Sbjct: 983 --HLYYLFPSLEEGGLATYRTAIVQNQ 1007
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,029,320
Number of Sequences: 37866
Number of extensions: 1083003
Number of successful extensions: 2435
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2386
Number of HSP's gapped (non-prelim): 49
length of query: 616
length of database: 18,247,518
effective HSP length: 108
effective length of query: 508
effective length of database: 14,157,990
effective search space: 7192258920
effective search space used: 7192258920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.