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Search of human proteins with 217272831
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|217272831 nuclear transcription factor Y, gamma isoform 1
[Homo sapiens]
(354 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|217272831 nuclear transcription factor Y, gamma isoform 1 [Ho... 692 0.0
gi|11496978 nuclear transcription factor Y, gamma isoform 2 [Hom... 642 0.0
gi|217272829 nuclear transcription factor Y, gamma isoform 3 [Ho... 635 0.0
gi|217272835 nuclear transcription factor Y, gamma isoform 5 [Ho... 552 e-157
gi|217272833 nuclear transcription factor Y, gamma isoform 4 [Ho... 550 e-157
gi|38455394 DNA-directed DNA polymerase epsilon 4 [Homo sapiens] 64 2e-10
gi|8393116 chromatin accessibility complex 1 [Homo sapiens] 59 7e-09
gi|221139761 zinc finger protein 853 [Homo sapiens] 57 3e-08
gi|18426973 DR1-associated protein 1 [Homo sapiens] 56 6e-08
gi|4505389 nuclear transcription factor Y, alpha isoform 1 [Homo... 55 1e-07
gi|11496974 nuclear transcription factor Y, alpha isoform 2 [Hom... 50 2e-06
gi|44890059 involucrin [Homo sapiens] 49 5e-06
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 47 3e-05
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 47 3e-05
gi|4758010 clock [Homo sapiens] 47 3e-05
gi|7706635 cornulin [Homo sapiens] 46 6e-05
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 45 8e-05
gi|56549696 E1A binding protein p400 [Homo sapiens] 45 8e-05
gi|38788274 bromodomain PHD finger transcription factor isoform ... 45 1e-04
gi|17017963 forkhead box P2 isoform I [Homo sapiens] 44 2e-04
gi|93141033 PAX interacting protein 1 [Homo sapiens] 42 6e-04
gi|38788260 bromodomain PHD finger transcription factor isoform ... 42 6e-04
gi|33286444 mastermind-like 2 [Homo sapiens] 42 8e-04
gi|226246533 TOX high mobility group box family member 3 isoform... 42 0.001
gi|226054295 TOX high mobility group box family member 3 isoform... 42 0.001
gi|67010025 Sp4 transcription factor [Homo sapiens] 41 0.002
gi|110347429 mediator complex subunit 12 [Homo sapiens] 40 0.003
gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sap... 40 0.003
gi|38570099 glutamine-rich 1 [Homo sapiens] 40 0.003
gi|38570097 glutamine-rich 1 [Homo sapiens] 40 0.003
>gi|217272831 nuclear transcription factor Y, gamma isoform 1 [Homo
sapiens]
Length = 354
Score = 692 bits (1785), Expect = 0.0
Identities = 354/354 (100%), Positives = 354/354 (100%)
Query: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM
Sbjct: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
Query: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR
Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
Query: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII
Sbjct: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
Query: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP
Sbjct: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
Query: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTE 300
VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTE
Sbjct: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTE 300
Query: 301 VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 354
VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD
Sbjct: 301 VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 354
>gi|11496978 nuclear transcription factor Y, gamma isoform 2 [Homo
sapiens]
Length = 335
Score = 642 bits (1655), Expect = 0.0
Identities = 335/354 (94%), Positives = 335/354 (94%), Gaps = 19/354 (5%)
Query: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM
Sbjct: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
Query: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR
Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
Query: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII
Sbjct: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
Query: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP
Sbjct: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
Query: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTE 300
VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQ QITQTE
Sbjct: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQ-------------------QITQTE 281
Query: 301 VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 354
VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD
Sbjct: 282 VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 335
>gi|217272829 nuclear transcription factor Y, gamma isoform 3 [Homo
sapiens]
Length = 334
Score = 635 bits (1638), Expect = 0.0
Identities = 334/354 (94%), Positives = 334/354 (94%), Gaps = 20/354 (5%)
Query: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM
Sbjct: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
Query: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR
Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
Query: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII
Sbjct: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
Query: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP
Sbjct: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
Query: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTE 300
VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQ QITQTE
Sbjct: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQ-------------------QITQTE 281
Query: 301 VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 354
VQQGQQQFSQFTDG QLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD
Sbjct: 282 VQQGQQQFSQFTDG-QLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 334
>gi|217272835 nuclear transcription factor Y, gamma isoform 5 [Homo
sapiens]
Length = 301
Score = 552 bits (1423), Expect = e-157
Identities = 300/354 (84%), Positives = 300/354 (84%), Gaps = 53/354 (14%)
Query: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM
Sbjct: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
Query: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR
Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
Query: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII
Sbjct: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
Query: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
A QPQ GQTMQVMQQIITNTGEIQQIP
Sbjct: 181 A-------------------------QPQ---------QGQTMQVMQQIITNTGEIQQIP 206
Query: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTE 300
VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQ ITQTE
Sbjct: 207 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQ-------------------ITQTE 247
Query: 301 VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 354
VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD
Sbjct: 248 VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 301
>gi|217272833 nuclear transcription factor Y, gamma isoform 4 [Homo
sapiens]
Length = 297
Score = 550 bits (1417), Expect = e-157
Identities = 297/354 (83%), Positives = 297/354 (83%), Gaps = 57/354 (16%)
Query: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKM 60
MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVK
Sbjct: 1 MSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVK- 59
Query: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120
RNDIAMAITKFDQFDFLIDIVPR
Sbjct: 60 -------------------------------------RNDIAMAITKFDQFDFLIDIVPR 82
Query: 121 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 180
DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII
Sbjct: 83 DELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIII 142
Query: 181 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP
Sbjct: 143 AQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 202
Query: 241 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTE 300
VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQ QITQTE
Sbjct: 203 VQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQ-------------------QITQTE 243
Query: 301 VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 354
VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD
Sbjct: 244 VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD 297
>gi|38455394 DNA-directed DNA polymerase epsilon 4 [Homo sapiens]
Length = 117
Score = 64.3 bits (155), Expect = 2e-10
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 34 TVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKR 93
+V R+ LPLAR+K ++K D DV + EA + A+AA++F+ + A+ + KR
Sbjct: 32 SVPGARLSRLPLARVKALVKADPDVTLAGQEAIFILARAAELFVETIAKDAYCCAQQGKR 91
Query: 94 RTLQRNDIAMAITKFDQFDFL 114
+TLQR D+ AI D+F FL
Sbjct: 92 KTLQRRDLDNAIEAVDEFAFL 112
>gi|8393116 chromatin accessibility complex 1 [Homo sapiens]
Length = 131
Score = 58.9 bits (141), Expect = 7e-09
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 39 RVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQR 98
R+ LPL+RI+ IMK +V I+ EA VL AKA ++F+ L ++ H +++ L
Sbjct: 15 RLISLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRHGSGKEKKVLTY 74
Query: 99 NDIAMAITKFDQFDFLIDIVPR--------DELKPPKRQEE 131
+D+A + + F FL DI+P+ LK KR+E+
Sbjct: 75 SDLANTAQQSETFQFLADILPKKILASKYLKMLKEEKREED 115
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 56.6 bits (135), Expect = 3e-08
Identities = 63/234 (26%), Positives = 94/234 (40%), Gaps = 13/234 (5%)
Query: 121 DELKPPKRQEEVRQSVTPAEPVQY-YFTLAQQPTA---VQVQGQQQGQQTTSSTTTIQPG 176
+E +P +R+ +++Q EP Q QQP +Q Q QQ GQQ S +
Sbjct: 80 EETRPGQRELQLQQLEQQPEPQQQPQHEQLQQPQPHLELQQQPQQDGQQQLSQLQQEKHQ 139
Query: 177 QIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEI 236
+ + P + + QQ+Q Q Q Q + QQ Q QQ++ ++
Sbjct: 140 SV-----HHQELKPELQLMHQQQQLQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQEQL 194
Query: 237 QQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQI 296
QQ + Q Q +L Q Q++Q Q Q QQ Q Q + L++ Q+
Sbjct: 195 QQQVQEQQLLQQQQEQLQQQ----QLLQQQEQLQQQQFQQQQEQLQQQQQLLLLQQQGQL 250
Query: 297 TQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQ 350
Q +QQ Q Q Q QQ Q+QQ + Q+ Q Q Q Q Q
Sbjct: 251 QQQLLQQQQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQLLQQQQEQLQQ 304
Score = 49.3 bits (116), Expect = 5e-06
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 27/202 (13%)
Query: 127 KRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQG 186
++QE+++Q V + +Q QQ +Q Q Q Q QQ +Q Q ++ QQG
Sbjct: 189 QQQEQLQQQVQEQQLLQQQQEQLQQQQLLQQQEQLQQQQFQQQQEQLQQQQQLLLLQQQG 248
Query: 187 QTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAG 246
Q + Q +Q QAQ Q Q + Q Q ++QQ + QQ +Q
Sbjct: 249 QL--------QQQLLQQQQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQLLQQQQE 300
Query: 247 QLQYIRLAQP------------------VSGTQVVQGQIQTLATNAQQGQRNASQGKPRR 288
QLQ +L P + Q ++ Q Q L Q+ +R Q + +
Sbjct: 301 QLQQQQLQPPPLEPEEEEEVELELMPVDLGSEQELEQQRQEL-ERQQELERQQEQRQLQL 359
Query: 289 CLKETLQITQTEVQQGQQQFSQ 310
L+E LQ + +++Q QQQ Q
Sbjct: 360 KLQEELQQLEQQLEQQQQQLEQ 381
Score = 36.6 bits (83), Expect = 0.035
Identities = 49/192 (25%), Positives = 76/192 (39%), Gaps = 8/192 (4%)
Query: 147 TLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQA 206
TL+ + Q +++ Q+ SS + A +T P ++ Q Q Q
Sbjct: 41 TLSGGSGGSESQEEEEPQERNSSPQRPAVSAPVGASEIAEETRPGQRELQLQQLEQ--QP 98
Query: 207 QPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQ 266
+PQ Q Q Q Q +QQ G+ Q +Q Q + + +P Q++ Q
Sbjct: 99 EPQQQPQHEQLQQPQPHLELQQQPQQDGQQQLSQLQQEKHQSVHHQELKP--ELQLMHQQ 156
Query: 267 IQTLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMP 326
Q Q+ QR Q + +T Q + +V Q Q+Q Q QQL Q QQ +
Sbjct: 157 QQLQPQQVQEQQRLQQQQEQ----LQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQ 212
Query: 327 AGQDLAQPMFIQ 338
Q L Q +Q
Sbjct: 213 QQQLLQQQEQLQ 224
>gi|18426973 DR1-associated protein 1 [Homo sapiens]
Length = 205
Score = 55.8 bits (133), Expect = 6e-08
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 44 PLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAM 103
P ARIKKIM+ DE++ ++A PV+ ++A ++F+ L +A T+ +T+ + +
Sbjct: 13 PPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQ 72
Query: 104 AITKFDQFDFLIDIV 118
I QFDFL D+V
Sbjct: 73 CIELEQQFDFLKDLV 87
>gi|4505389 nuclear transcription factor Y, alpha isoform 1 [Homo
sapiens]
Length = 347
Score = 54.7 bits (130), Expect = 1e-07
Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQ 209
QQ VQ Q + Q ++S +Q Q++ QP Q + + GQ + +VQA P
Sbjct: 26 QQGGVTAVQLQTEAQVASASGQQVQTLQVVQGQPLMVQVSGGQLITSTGQPI-MVQAVPG 84
Query: 210 GQAQQAQSGTGQTMQVMQQI-ITNTGEI-----QQIPVQLNAGQLQYIRLAQPVSGTQVV 263
GQ Q Q +QQI + G+I Q + VQ GQ Q I + QP T V
Sbjct: 85 GQGQTIMQVPVSGTQGLQQIQLVPPGQIQIQGGQAVQVQGQQGQTQQIIIQQP--QTAVT 142
Query: 264 QGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQ 303
GQ QT A QGQ+ A + + + + + T +QQ
Sbjct: 143 AGQTQTQQQIAVQGQQVAQTAEGQTIVYQPVNADGTILQQ 182
Score = 48.1 bits (113), Expect = 1e-05
Identities = 45/143 (31%), Positives = 60/143 (41%), Gaps = 25/143 (17%)
Query: 147 TLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQA 206
T+ Q P + QG QQ Q IQ GQ + Q QQGQT QI+
Sbjct: 89 TIMQVPVS-GTQGLQQIQLVPPGQIQIQGGQAVQVQGQQGQTQ------------QIIIQ 135
Query: 207 QPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQI---PVQLNAGQLQYIRL---------A 254
QPQ Q+ T Q + V Q + T E Q I PV + LQ + + A
Sbjct: 136 QPQTAVTAGQTQTQQQIAVQGQQVAQTAEGQTIVYQPVNADGTILQQVTVPVSGMITIPA 195
Query: 255 QPVSGTQVVQGQIQTLATNAQQG 277
++G Q+VQ T T++ QG
Sbjct: 196 ASLAGAQIVQTGANTNTTSSGQG 218
>gi|11496974 nuclear transcription factor Y, alpha isoform 2 [Homo
sapiens]
Length = 318
Score = 50.4 bits (119), Expect = 2e-06
Identities = 53/158 (33%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 160 QQQGQQTTSSTTTI--QPGQIIIAQPQQGQTTPVTMQVGEGQQVQ------IVQAQPQGQ 211
+Q + SST I Q GQI QQ Q P+ +QV GQ + +VQA P GQ
Sbjct: 2 EQYTANSNSSTEQIVVQAGQI----QQQVQGQPLMVQVSGGQLITSTGQPIMVQAVPGGQ 57
Query: 212 AQQAQSGTGQTMQVMQQI-ITNTGEIQ-----QIPVQLNAGQLQYIRLAQPVSGTQVVQG 265
Q Q +QQI + G+IQ + VQ GQ Q I + QP T V G
Sbjct: 58 GQTIMQVPVSGTQGLQQIQLVPPGQIQIQGGQAVQVQGQQGQTQQIIIQQPQ--TAVTAG 115
Query: 266 QIQTLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQ 303
Q QT A QGQ+ A + + + + + T +QQ
Sbjct: 116 QTQTQQQIAVQGQQVAQTAEGQTIVYQPVNADGTILQQ 153
Score = 48.1 bits (113), Expect = 1e-05
Identities = 45/143 (31%), Positives = 60/143 (41%), Gaps = 25/143 (17%)
Query: 147 TLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQA 206
T+ Q P + QG QQ Q IQ GQ + Q QQGQT QI+
Sbjct: 60 TIMQVPVS-GTQGLQQIQLVPPGQIQIQGGQAVQVQGQQGQTQ------------QIIIQ 106
Query: 207 QPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQI---PVQLNAGQLQYIRL---------A 254
QPQ Q+ T Q + V Q + T E Q I PV + LQ + + A
Sbjct: 107 QPQTAVTAGQTQTQQQIAVQGQQVAQTAEGQTIVYQPVNADGTILQQVTVPVSGMITIPA 166
Query: 255 QPVSGTQVVQGQIQTLATNAQQG 277
++G Q+VQ T T++ QG
Sbjct: 167 ASLAGAQIVQTGANTNTTSSGQG 189
>gi|44890059 involucrin [Homo sapiens]
Length = 585
Score = 49.3 bits (116), Expect = 5e-06
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 35/207 (16%)
Query: 122 ELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIA 181
+L+ P++QE Q P + QQ +++ QQ+GQ Q GQ+ +
Sbjct: 222 QLELPEQQEG--QLELPQQQEGQLELSEQQEGQLELSEQQEGQLKHLEH---QEGQLEVP 276
Query: 182 QPQQGQTTPVTMQVGEGQQVQIVQAQPQ------GQAQQAQSGTGQTMQVMQQIITNTGE 235
+ Q GQ + Q G+ + + + QP+ GQ + + GQ + QQ G+
Sbjct: 277 EEQMGQLKYLEQQEGQLKHLDQQEKQPELPEQQMGQLKHLEQQEGQPKHLEQQ----EGQ 332
Query: 236 IQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQ 295
++Q+ Q GQL+++ + +GQ++ L Q+GQ + ++ LQ
Sbjct: 333 LEQLEEQ--EGQLKHL---------EQQEGQLEHL--EHQEGQLGLPE-------QQVLQ 372
Query: 296 ITQTEVQQGQQQFSQFTDGQQLYQIQQ 322
+ Q E QQGQ + + +GQ + +QQ
Sbjct: 373 LKQLEKQQGQPKHLEEEEGQLKHLVQQ 399
Score = 42.4 bits (98), Expect = 6e-04
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVG-----EGQQVQI- 203
QQ +++ QQ+GQ Q GQ+ + + Q+GQ Q G + Q+ Q+
Sbjct: 188 QQEGQLELPEQQEGQLELPEQ---QEGQLELPEQQEGQLELPEQQEGQLELPQQQEGQLE 244
Query: 204 VQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVV 263
+ Q +GQ + ++ GQ + Q G+++ Q+ GQL+Y+ Q +
Sbjct: 245 LSEQQEGQLELSEQQEGQLKHLEHQ----EGQLEVPEEQM--GQLKYLE-QQEGQLKHLD 297
Query: 264 QGQIQTLATNAQQGQ---RNASQGKPRRCLKETLQITQTEVQQGQQQFSQFTDGQ---QL 317
Q + Q Q GQ +G+P+ ++ Q+ Q E Q+GQ + + +GQ
Sbjct: 298 QQEKQPELPEQQMGQLKHLEQQEGQPKHLEQQEGQLEQLEEQEGQLKHLEQQEGQLEHLE 357
Query: 318 YQIQQVTMPAGQDLAQPMFIQSANQP 343
+Q Q+ +P Q L + QP
Sbjct: 358 HQEGQLGLPEQQVLQLKQLEKQQGQP 383
Score = 38.5 bits (88), Expect = 0.009
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 20/212 (9%)
Query: 122 ELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIA 181
+LK + QE Q P E + L QQ ++ QQ+ Q Q GQ+
Sbjct: 262 QLKHLEHQEG--QLEVPEEQMGQLKYLEQQEGQLKHLDQQEKQPELPEQ---QMGQLKHL 316
Query: 182 QPQQGQTTPVTMQVGEGQQVQIVQAQ------PQGQAQQAQSGTGQTMQVMQQIITNTGE 235
+ Q+GQ + Q G+ +Q++ + Q +GQ + + GQ QQ++ +
Sbjct: 317 EQQEGQPKHLEQQEGQLEQLEEQEGQLKHLEQQEGQLEHLEHQEGQLGLPEQQVL----Q 372
Query: 236 IQQIPVQLNAGQLQYIRLAQPVSGTQVVQ-GQIQTLATNAQQGQRNASQGKPRRCLKETL 294
++Q+ Q GQ +++ + V Q GQ++ L Q+GQ + + ++
Sbjct: 373 LKQLEKQ--QGQPKHLEEEEGQLKHLVQQEGQLKHLVQ--QEGQLEQQERQVEHLEQQVG 428
Query: 295 QITQTEVQQGQQQFSQFTDGQQLYQIQQVTMP 326
Q+ E Q+GQ + + GQ QQV P
Sbjct: 429 QLKHLEEQEGQLKHLEQQQGQLEVPEQQVGQP 460
Score = 31.2 bits (69), Expect = 1.5
Identities = 42/194 (21%), Positives = 73/194 (37%), Gaps = 45/194 (23%)
Query: 155 VQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQ 214
VQ +GQ + Q+ Q GQ+ + Q+GQ + Q G+
Sbjct: 407 VQQEGQLEQQERQVEHLEQQVGQLKHLEEQEGQLKHLEQQQGQ----------------- 449
Query: 215 AQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNA 274
++V +Q + ++Q QL + Q +GQ++ L
Sbjct: 450 --------LEVPEQQVGQPKNLEQEEKQLELPEQQ--------------EGQVKHLEKQE 487
Query: 275 QQGQRNASQ-GKPRRCLKETLQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQ 333
Q + Q G+P+ ++ + E Q GQ + + QQ Q++ + GQ L Q
Sbjct: 488 AQLELPEQQVGQPKHLEQQEKHLEHPEQQDGQLKHLE----QQEGQLKDLEQQKGQ-LEQ 542
Query: 334 PMFIQSANQPSDGQ 347
P+F + Q D Q
Sbjct: 543 PVFAPAPGQVQDIQ 556
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 47.0 bits (110), Expect = 3e-05
Identities = 49/154 (31%), Positives = 60/154 (38%), Gaps = 10/154 (6%)
Query: 199 QQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVS 258
QQV + Q Q Q Q QQ Q Q Q QQ QQ Q +A Q Q+ + Q
Sbjct: 156 QQVALQQQQQQQQFQQQQQAALQQQQQQQQQ-------QQFQAQQSAMQQQFQAVVQQQQ 208
Query: 259 GTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQGQQQFSQFTDGQQLY 318
Q Q Q Q L Q Q+ Q + + LQ+ Q + QQ QQQ Q Q
Sbjct: 209 QLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQP 268
Query: 319 QIQQVTMPAGQ---DLAQPMFIQSANQPSDGQAP 349
IQQ M Q A P +Q + Q P
Sbjct: 269 PIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPP 302
Score = 41.6 bits (96), Expect = 0.001
Identities = 48/171 (28%), Positives = 65/171 (38%), Gaps = 12/171 (7%)
Query: 186 GQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNA 245
GQ P T + + A PQ Q Q Q Q Q Q +QQ Q
Sbjct: 127 GQPPPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQ 186
Query: 246 GQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQ-----RNASQGKPRRCLKETLQITQTE 300
Q Q + A VVQ Q Q L QQ Q + +Q + ++ ++ +I Q +
Sbjct: 187 QQFQAQQSAMQQQFQAVVQQQ-QQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQ 245
Query: 301 VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQV 351
+QQ QQQ QQ Q QQ + A + QP Q PS Q+
Sbjct: 246 LQQQQQQ------QQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQL 290
Score = 37.7 bits (86), Expect = 0.016
Identities = 62/225 (27%), Positives = 85/225 (37%), Gaps = 23/225 (10%)
Query: 123 LKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQ 182
L+ ++Q++ +Q +Q F Q Q Q QQQ QQ Q I Q
Sbjct: 177 LQQQQQQQQQQQFQAQQSAMQQQFQAVVQQ---QQQLQQQQQQQQHLIKLHHQNQQQIQQ 233
Query: 183 PQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQ 242
QQ +Q+ + QQ Q Q Q Q QA QAQ Q MQQ Q +P Q
Sbjct: 234 QQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQ--PPMQQ--PQPPPSQALPQQ 289
Query: 243 LN----------AGQLQYIRLAQPVSGTQVVQGQIQTLATNAQ--QGQRNASQGKPRRCL 290
L Q Q +AQ Q Q Q L + AQ GQ +Q P + +
Sbjct: 290 LQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQ-PPLKFV 348
Query: 291 KETLQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPM 335
+ + + Q V Q Q Q Q Q Q+ P Q + + +
Sbjct: 349 RAPMVVQQPPV---QPQVQQQQTAVQTAQAAQMVAPGVQMITEAL 390
Score = 37.0 bits (84), Expect = 0.027
Identities = 58/228 (25%), Positives = 79/228 (34%), Gaps = 40/228 (17%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQ 185
P+ Q +++Q + Q F QQ Q Q QQQ QQ + + +Q QQ
Sbjct: 149 PQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQ---------QQ 199
Query: 186 GQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNA 245
Q V + QQ+Q Q Q Q + Q Q QQ+ Q QL
Sbjct: 200 FQAV-----VQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQL--------QRIAQLQL 246
Query: 246 GQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQGQ 305
Q Q + Q Q +Q Q QQ Q SQ P ++ Q+ T+ Q
Sbjct: 247 QQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALP----QQLQQMHHTQHHQPP 302
Query: 306 QQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTG 353
Q Q P Q+ + QS QP QA + G
Sbjct: 303 PQPQQ--------------PPVAQNQPSQLPPQSQTQPLVSQAQALPG 336
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 47.0 bits (110), Expect = 3e-05
Identities = 49/154 (31%), Positives = 60/154 (38%), Gaps = 10/154 (6%)
Query: 199 QQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVS 258
QQV + Q Q Q Q QQ Q Q Q QQ QQ Q +A Q Q+ + Q
Sbjct: 156 QQVALQQQQQQQQFQQQQQAALQQQQQQQQQ-------QQFQAQQSAMQQQFQAVVQQQQ 208
Query: 259 GTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQGQQQFSQFTDGQQLY 318
Q Q Q Q L Q Q+ Q + + LQ+ Q + QQ QQQ Q Q
Sbjct: 209 QLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQP 268
Query: 319 QIQQVTMPAGQ---DLAQPMFIQSANQPSDGQAP 349
IQQ M Q A P +Q + Q P
Sbjct: 269 PIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPP 302
Score = 41.6 bits (96), Expect = 0.001
Identities = 48/171 (28%), Positives = 65/171 (38%), Gaps = 12/171 (7%)
Query: 186 GQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNA 245
GQ P T + + A PQ Q Q Q Q Q Q +QQ Q
Sbjct: 127 GQPPPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQ 186
Query: 246 GQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQ-----RNASQGKPRRCLKETLQITQTE 300
Q Q + A VVQ Q Q L QQ Q + +Q + ++ ++ +I Q +
Sbjct: 187 QQFQAQQSAMQQQFQAVVQQQ-QQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQ 245
Query: 301 VQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQV 351
+QQ QQQ QQ Q QQ + A + QP Q PS Q+
Sbjct: 246 LQQQQQQ------QQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQL 290
Score = 41.2 bits (95), Expect = 0.001
Identities = 69/247 (27%), Positives = 94/247 (38%), Gaps = 33/247 (13%)
Query: 123 LKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQ 182
L+ ++Q++ +Q +Q F Q Q Q QQQ QQ Q I Q
Sbjct: 177 LQQQQQQQQQQQFQAQQSAMQQQFQAVVQQ---QQQLQQQQQQQQHLIKLHHQNQQQIQQ 233
Query: 183 PQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQ 242
QQ +Q+ + QQ Q Q Q Q QA QAQ Q MQQ Q +P Q
Sbjct: 234 QQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQ--PPMQQ--PQPPPSQALPQQ 289
Query: 243 LN----------AGQLQYIRLAQPVSGTQVVQGQIQTLATNAQ--QGQRNASQGKPRRCL 290
L Q Q +AQ Q Q Q L + AQ GQ +Q P + +
Sbjct: 290 LQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQ-PPLKFV 348
Query: 291 KETLQITQTEVQ---QGQQQFSQFTDGQQL----YQIQQVTMP------AGQDLAQPMFI 337
+ + + Q VQ Q QQ Q Q+ Q+ Q ++P GQ + P +
Sbjct: 349 RAPMVVQQPPVQPQVQQQQTAVQTAQAAQMVAPGVQVSQSSLPMLSSPSPGQQVQTPQSM 408
Query: 338 QSANQPS 344
QPS
Sbjct: 409 PPPPQPS 415
Score = 37.0 bits (84), Expect = 0.027
Identities = 58/228 (25%), Positives = 79/228 (34%), Gaps = 40/228 (17%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQ 185
P+ Q +++Q + Q F QQ Q Q QQQ QQ + + +Q QQ
Sbjct: 149 PQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQ---------QQ 199
Query: 186 GQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNA 245
Q V + QQ+Q Q Q Q + Q Q QQ+ Q QL
Sbjct: 200 FQAV-----VQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQL--------QRIAQLQL 246
Query: 246 GQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQGQ 305
Q Q + Q Q +Q Q QQ Q SQ P ++ Q+ T+ Q
Sbjct: 247 QQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALP----QQLQQMHHTQHHQPP 302
Query: 306 QQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTG 353
Q Q P Q+ + QS QP QA + G
Sbjct: 303 PQPQQ--------------PPVAQNQPSQLPPQSQTQPLVSQAQALPG 336
>gi|4758010 clock [Homo sapiens]
Length = 846
Score = 46.6 bits (109), Expect = 3e-05
Identities = 59/213 (27%), Positives = 85/213 (39%), Gaps = 36/213 (16%)
Query: 164 QQTTSSTTTIQPGQIIIAQPQQ----GQT----------TPVTMQVGEGQQVQIVQAQPQ 209
QQT ST+T ++ QQ QT T V Q G VQI + PQ
Sbjct: 625 QQTLQSTSTQSQQNVLSGHSQQTSLPSQTQSTLTAPLYNTMVISQPAAGSMVQIPSSMPQ 684
Query: 210 GQAQQAQSGT---------GQTMQVMQQIIT---NTGEIQQIPVQLNAGQLQYIRLAQPV 257
Q A T Q Q++ +++T G + +P + GQ + A P
Sbjct: 685 NSTQSAAVTTFTQDRQIRFSQGQQLVTKLVTAPVACGAV-MVPSTMLMGQ---VVTAYPT 740
Query: 258 SGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQGQQQFSQFTDGQQL 317
TQ Q Q QTL+ QQ Q+++ + + L Q +Q ++ Q QQF Q +
Sbjct: 741 FATQ--QQQSQTLSVTQQQQQQSSQEQQ----LTSVQQPSQAQLTQPPQQFLQTSRLLHG 794
Query: 318 YQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQ 350
Q+ + A L Q F QS +Q Q Q
Sbjct: 795 NPSTQLILSAAFPLQQSTFPQSHHQQHQSQQQQ 827
Score = 29.3 bits (64), Expect = 5.6
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Query: 151 QPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQ-PQQGQTTPVTMQVGEGQQVQIVQAQPQ 209
Q +V Q QQQ Q T+ QP Q + Q PQQ T + Q+ + A P
Sbjct: 749 QTLSVTQQQQQQSSQEQQLTSVQQPSQAQLTQPPQQFLQTSRLLHGNPSTQLILSAAFPL 808
Query: 210 GQAQQAQSGTGQTMQVMQQ 228
Q+ QS Q QQ
Sbjct: 809 QQSTFPQSHHQQHQSQQQQ 827
>gi|7706635 cornulin [Homo sapiens]
Length = 495
Score = 45.8 bits (107), Expect = 6e-05
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 26/192 (13%)
Query: 161 QQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTG 220
Q G T + T T++ + Q G T+ T + GQ + + QG++Q +Q+ TG
Sbjct: 290 QAGTHTQTPTQTVEQD----SSHQTGSTSTQTQESTNGQN-RGTEIHGQGRSQTSQAVTG 344
Query: 221 QTMQVM------------QQIITNTGEIQQIPVQLNAGQLQ-YIRLAQPVSGTQVVQGQI 267
Q+ Q +++ G +Q Q G Q +++++ P +G V GQ
Sbjct: 345 GHTQIQAGSHTETVEQDRSQTVSHGGAREQGQTQTQPGSGQRWMQVSNPEAGETVPGGQA 404
Query: 268 QTLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQGQQQFSQFTDGQQLYQIQQ----- 322
QT A+ + G++ S PRRC+ E Q V G++ + + ++ Q
Sbjct: 405 QTGAST-ESGRQEWSSTHPRRCVTEGQGDRQPTV-VGEEWVDDHSRETVILRLDQGNLHT 462
Query: 323 -VTMPAGQDLAQ 333
V+ GQD AQ
Sbjct: 463 SVSSAQGQDAAQ 474
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 45.4 bits (106), Expect = 8e-05
Identities = 56/237 (23%), Positives = 86/237 (36%), Gaps = 42/237 (17%)
Query: 119 PRDELKPPKRQEEVRQSVTPAEP---------VQYYFTLAQQPTAVQVQGQQQGQQTTSS 169
P+ + P Q + Q ++P P Q Q P A+ QG + T S
Sbjct: 3773 PQGLMPPSSHQGLLVQQLSPQPPQGPQGMLGPAQVAVLQQQHPGALGPQGPHRQVLMTQS 3832
Query: 170 TTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQI 229
P +AQ QG G ++ Q Q Q Q Q Q + Q +
Sbjct: 3833 RVLSSPQ---LAQQGQGLM---------GHRLVTAQQQQQQQQHQQQGSMAGLSHLQQSL 3880
Query: 230 ITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRC 289
++++G+ + AQP+ G +Q L Q Q+ Q + ++
Sbjct: 3881 MSHSGQPKLS--------------AQPM-------GSLQQLQQQQQLQQQQQLQQQQQQQ 3919
Query: 290 LKETLQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDG 346
L++ Q+ Q ++QQ QQQ QQ Q QQ + Q Q F Q Q G
Sbjct: 3920 LQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMG 3976
Score = 35.8 bits (81), Expect = 0.060
Identities = 58/210 (27%), Positives = 82/210 (39%), Gaps = 27/210 (12%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQ 209
QQ Q Q QQQ QQ +Q Q+ Q QQ +Q + QQ+Q Q Q Q
Sbjct: 3903 QQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQ------QLQQQQQQQLQQQQQQLQ 3956
Query: 210 GQAQQAQSGTGQTMQVMQQIITNTG-------EIQQIPVQLNAGQ----LQYIRLAQPVS 258
Q QQ Q Q Q Q + N + QQ V L G LQ+ +
Sbjct: 3957 QQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQQVALGPGMPAKPLQHFSSPGALG 4016
Query: 259 GTQVVQGQIQ-----TLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQGQQQFSQFTD 313
T ++ G+ Q +++ A +G + QG P + T + TE G+ + S D
Sbjct: 4017 PTLLLTGKEQNTVDPAVSSEATEGP-STHQGGP-LAIGTTPESMATE--PGEVKPSLSGD 4072
Query: 314 GQ-QLYQIQQVTMPAGQDLAQPMFIQSANQ 342
Q L Q Q P+ L P+ + Q
Sbjct: 4073 SQLLLVQPQPQPQPSSLQLQPPLRLPGQQQ 4102
Score = 34.7 bits (78), Expect = 0.13
Identities = 63/248 (25%), Positives = 96/248 (38%), Gaps = 21/248 (8%)
Query: 86 IHTEDNKRRTLQRNDIAMAITKFDQFDF-LIDIVPRDELKPPKRQEEVRQSVTPAEPVQY 144
+H + K ++ A +F + D + +V + K K+ ++VR+ +
Sbjct: 3534 VHRKSRKALCAKQRTAKKAGREFPEADAEKLKLVTEQQSKIQKQLDQVRKQQKEHTNLMA 3593
Query: 145 YFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIV 204
+ QQ Q Q QQQ QQ S+ + P Q P+ P + G G +Q
Sbjct: 3594 EYRNKQQQ---QQQQQQQQQQQHSAVLALSPSQ----SPRLLTKLPGQLLPGHG--LQPP 3644
Query: 205 QAQPQGQAQQAQSGTGQTMQVMQQ--IITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQV 262
Q P GQA + G Q NT QQ Q + G LA P G
Sbjct: 3645 QGPPGGQAGGLRLTPGGMALPGQPGGPFLNTALAQQQQQQHSGGAGS---LAGPSGGFFP 3701
Query: 263 VQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQ-TEVQQGQQQFSQFTDGQQLYQIQ 321
+++L +++ Q Q + +R +Q+ Q + QQ QQQ Q GQ Q Q
Sbjct: 3702 GNLALRSLGPDSRLLQERQLQLQQQR-----MQLAQKLQQQQQQQQQQQHLLGQVAIQQQ 3756
Query: 322 QVTMPAGQ 329
Q P Q
Sbjct: 3757 QQQGPGVQ 3764
Score = 32.7 bits (73), Expect = 0.51
Identities = 55/239 (23%), Positives = 86/239 (35%), Gaps = 23/239 (9%)
Query: 119 PRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTT-IQPGQ 177
P L+ ++Q++++Q + Q QQ Q+Q QQQ QQ +Q Q
Sbjct: 3893 PMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQ 3952
Query: 178 IIIAQPQQGQTTPVTMQVGEGQ-----QVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITN 232
+ Q QQ Q Q + Q Q + + + Q Q QQ G G + +Q ++
Sbjct: 3953 QQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQQVALGPGMPAKPLQH-FSS 4011
Query: 233 TGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQG----QIQTLATNAQQGQRNASQGKPRR 288
G + P L G+ Q P ++ +G Q LA G+ +
Sbjct: 4012 PGALG--PTLLLTGKEQ--NTVDPAVSSEATEGPSTHQGGPLAIGTTPESMATEPGEVKP 4067
Query: 289 CLKETLQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQ 347
L Q+ + Q Q S Q+Q GQ Q + +A S GQ
Sbjct: 4068 SLSGDSQLLLVQPQPQPQPSS--------LQLQPPLRLPGQQQQQVSLLHTAGGGSHGQ 4118
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 45.4 bits (106), Expect = 8e-05
Identities = 55/210 (26%), Positives = 81/210 (38%), Gaps = 30/210 (14%)
Query: 128 RQEEVRQSVTPAEPVQYYFTLAQQPTA-VQVQGQQQGQQTTSSTTTI---QPGQIIIAQP 183
+ ++ + + P P + QPTA VQVQ Q QQ + TT+ +PG ++
Sbjct: 2782 KMQKQKLQMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQQQSPQLTTVTAPRPGALLTG-- 2839
Query: 184 QQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQL 243
TT +QV +V Q Q QGQ Q Q +++ + P
Sbjct: 2840 ----TTVANLQVARLTRVPTSQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSP--- 2892
Query: 244 NAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQ 303
L V+G V GQ Q A GQ +Q +++ L++ Q VQQ
Sbjct: 2893 -----GVTTLPMNVAGISVAIGQPQKAA-----GQTVVAQPVH---MQQLLKLKQQAVQQ 2939
Query: 304 GQQQFSQFTDG----QQLYQIQQVTMPAGQ 329
+ Q G QQ QQ+T P Q
Sbjct: 2940 QKAIQPQAAQGPAAVQQKITAQQITTPGAQ 2969
Score = 43.9 bits (102), Expect = 2e-04
Identities = 66/250 (26%), Positives = 91/250 (36%), Gaps = 31/250 (12%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQ 185
P Q + + + P LA+ P T+ + + I QPQ+
Sbjct: 2854 PTSQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSPGVTTLPMNVAGISVAIGQPQK 2913
Query: 186 --GQTT---PVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP 240
GQT PV MQ + Q VQ Q Q Q AQ ++ Q IT G Q++
Sbjct: 2914 AAGQTVVAQPVHMQQLLKLKQQAVQQQKAIQPQAAQGPAAVQQKITAQQITTPGAQQKVA 2973
Query: 241 VQLN-AGQLQY----IRLAQPVSGTQVVQGQI-----------QTLATNAQQGQRNASQG 284
A + Q+ I AQ ++G Q VQ QI QT + QQ + Q
Sbjct: 2974 YAAQPALKTQFLTTPISQAQKLAGAQQVQTQIQVAKLPQVVQQQTPVASIQQVASASQQA 3033
Query: 285 KPRRCLKETLQITQ-TEVQQGQQQFSQFTDGQQLYQ----IQQVTMPAGQDLAQPMFIQS 339
P +T+ +TQ T Q Q T Q+ Q QQV A L P
Sbjct: 3034 SP-----QTVALTQATAAGQQVQMIPAVTATAQVVQQKLIQQQVVTTASAPLQTPGAPNP 3088
Query: 340 ANQPSDGQAP 349
A P+ +P
Sbjct: 3089 AQVPASSDSP 3098
Score = 33.5 bits (75), Expect = 0.30
Identities = 40/172 (23%), Positives = 57/172 (33%), Gaps = 18/172 (10%)
Query: 135 SVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQ 194
SVT + V T Q P V Q TI P + + QQ Q Q
Sbjct: 2671 SVTASAVVTTNLTPVQTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQ 2730
Query: 195 VGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLA 254
+ QQ Q Q Q Q Q T T ++Q +Q A I+
Sbjct: 2731 QQQQQQQQQQQQQQQQQT------------------TTTSQVQVPQIQGQAQSPAQIKAV 2772
Query: 255 QPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQGQQ 306
++ +++ Q Q L Q A P+ + +Q +Q QQ Q
Sbjct: 2773 GKLTPEHLIKMQKQKLQMPPQPPPPQAQSAPPQPTAQVQVQTSQPPQQQSPQ 2824
Score = 33.1 bits (74), Expect = 0.39
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 17/127 (13%)
Query: 118 VPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQ 177
+ ++ P Q++V + PA Q+ T Q A ++ G QQ Q T IQ +
Sbjct: 2958 ITAQQITTPGAQQKVAYAAQPALKTQFLTTPISQ--AQKLAGAQQVQ------TQIQVAK 3009
Query: 178 IIIAQPQQGQTTPVT--MQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGE 235
+ QQ TPV QV Q QA PQ A + GQ +Q++ +
Sbjct: 3010 LPQVVQQQ---TPVASIQQVASASQ----QASPQTVALTQATAAGQQVQMIPAVTATAQV 3062
Query: 236 IQQIPVQ 242
+QQ +Q
Sbjct: 3063 VQQKLIQ 3069
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 45.1 bits (105), Expect = 1e-04
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 32/227 (14%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQ-QTTSSTTTIQPGQ----III 180
P +Q +V+ + + P+Q + +L + QGQ Q Q Q SST T+ GQ + +
Sbjct: 2361 PGQQSQVQTTTSQPIPIQPHTSLQ-----IPSQGQPQSQPQVQSSTQTLSSGQTLNQVTV 2415
Query: 181 AQP-----QQGQTTPVTMQVGE-GQQVQI---VQAQPQGQAQQAQSGTGQTMQVMQQIIT 231
+ P Q Q P + V + QQVQ+ +Q+Q Q Q QSG Q +++ I
Sbjct: 2416 SSPSRPQLQIQQPQPQVIAVPQLQQQVQVLSQIQSQVVAQIQAQQSGVPQQIKLQLPI-- 2473
Query: 232 NTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLK 291
+IQQ + Q+Q + Q S VQ Q+Q + Q Q+ Q + +
Sbjct: 2474 ---QIQQSSA-VQTHQIQNVVTVQAAS----VQEQLQRVQQLRDQQQKKKQQQIEIK-RE 2524
Query: 292 ETLQIT-QTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFI 337
TLQ + Q+E+ Q Q + L Q + +T PA ++ Q M +
Sbjct: 2525 HTLQASNQSEIIQKQVVMKHNAVIEHLKQKKSMT-PAEREENQRMIV 2570
Score = 42.4 bits (98), Expect = 6e-04
Identities = 59/233 (25%), Positives = 87/233 (37%), Gaps = 40/233 (17%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQ 185
P ++V + +PV T P V Q+ + +ST+ IQ +PQQ
Sbjct: 2086 PGAPQQVMTQIIRGQPVS---TAVSAPNTVSSTPGQKSLTSATSTSNIQSSASQPPRPQQ 2142
Query: 186 GQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP--VQL 243
G QV++ AQ Q Q G V+Q TG++Q IP V +
Sbjct: 2143 G-------------QVKLTMAQ-LTQLTQGHGGNQGLTVVIQGQGQTTGQLQLIPQGVTV 2188
Query: 244 NAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQ 303
G Q + A +GT V + LAT A T ++ T
Sbjct: 2189 LPGPGQQLMQAAMPNGT-VQRFLFTPLATTATTASTT------------TTTVSTTAAGT 2235
Query: 304 GQQQFSQFTDGQQLYQIQQVTMPAGQDL------AQPMFIQSANQPSDGQAPQ 350
G+Q+ S+ + Q++ Q T+P Q AQP Q + QP PQ
Sbjct: 2236 GEQRQSKLSPQMQVH--QDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQ 2286
Score = 42.4 bits (98), Expect = 6e-04
Identities = 55/252 (21%), Positives = 95/252 (37%), Gaps = 41/252 (16%)
Query: 125 PPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQ 184
P + + + + V V + QPT Q Q Q+ + + + P
Sbjct: 2288 PAQPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQSPS 2347
Query: 185 QGQ---TTPVTMQVGEGQQVQIVQAQP-------------QGQAQ---QAQSGTGQTM-- 223
Q + +TP + G+ QVQ +QP QGQ Q Q QS T QT+
Sbjct: 2348 QTRIRPSTPSQLSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQPQSQPQVQSST-QTLSS 2406
Query: 224 -QVMQQIITNTGEIQQIPVQLNAGQLQYI-RLAQPVSGTQVVQGQIQTLATNAQQG---- 277
Q + Q+ ++ Q+ +Q Q+ + +L Q V +Q Q+ Q G
Sbjct: 2407 GQTLNQVTVSSPSRPQLQIQQPQPQVIAVPQLQQQVQVLSQIQSQVVAQIQAQQSGVPQQ 2466
Query: 278 -------QRNASQGKPRRCLKETLQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQD 330
Q S ++ + + VQ+ Q+ Q D QQ + QQ+ +
Sbjct: 2467 IKLQLPIQIQQSSAVQTHQIQNVVTVQAASVQEQLQRVQQLRDQQQKKKQQQI------E 2520
Query: 331 LAQPMFIQSANQ 342
+ + +Q++NQ
Sbjct: 2521 IKREHTLQASNQ 2532
Score = 32.7 bits (73), Expect = 0.51
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTP-----VTMQVGEGQQVQIV 204
Q+PT + T+S+T+TI P Q ++ P G T +T +VG V
Sbjct: 1923 QKPTVIATSTTSP---TSSTTSTISPAQKVMVAPISGSVTTGTKMVLTTKVGSPATVTFQ 1979
Query: 205 QAQPQGQ-----AQQAQSGTGQTMQVMQQII----TNTGEIQQ 238
Q + Q +Q QS +G +QV Q+++ ++TG QQ
Sbjct: 1980 QNKNFHQTFATWVKQGQSNSG-VVQVQQKVLGIIPSSTGTSQQ 2021
>gi|17017963 forkhead box P2 isoform I [Homo sapiens]
Length = 715
Score = 44.3 bits (103), Expect = 2e-04
Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 19/204 (9%)
Query: 147 TLAQQPTAVQVQGQQQGQQTTSSTTTIQ------------PGQIIIAQPQQGQTTPVTMQ 194
TL+ Q A G+ G T+S +T++ Q+++ Q G +P +
Sbjct: 22 TLSSQLDAGSRDGRSSGD-TSSEVSTVELLHLQQQQALQAARQLLLQQQTSGLKSPKSSD 80
Query: 195 VGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLA 254
QV + A Q Q Q Q++QQ + + ++Q + Q A LQ +L
Sbjct: 81 KQRPLQVPVSVAMMTPQVITPQ----QMQQILQQQVLSPQQLQALLQQQQAVMLQQQQL- 135
Query: 255 QPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQGQQQFSQFTDG 314
Q Q Q +Q L QQ Q+ Q + ++ ++ Q Q + QQ QQQ Q G
Sbjct: 136 QEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQ-QQQQQQQQQQQQQQQHPG 194
Query: 315 QQLYQIQQVTMPAGQDLAQPMFIQ 338
+Q + QQ Q AQ + Q
Sbjct: 195 KQAKEQQQQQQQQQQLAAQQLVFQ 218
Score = 42.0 bits (97), Expect = 8e-04
Identities = 49/182 (26%), Positives = 73/182 (40%), Gaps = 15/182 (8%)
Query: 150 QQPTAVQ------VQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQI 203
QQ A+Q +Q Q G ++ S+ +P Q+ ++ Q+ + Q Q+
Sbjct: 53 QQQQALQAARQLLLQQQTSGLKSPKSSDKQRPLQVPVSVAMMTPQVITPQQMQQILQQQV 112
Query: 204 VQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVV 263
+ Q Q Q Q +Q+ E Q+ +QL Q Q + Q Q
Sbjct: 113 LSPQQLQALLQQQQAVMLQQQQLQEFYKKQQE--QLHLQLLQQQQQQQQQQQQQQQQQQQ 170
Query: 264 QGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQGQQQFS--QFTDGQQLYQIQ 321
Q Q Q QQ Q+ Q P + KE Q + QQ QQQ + Q QQL Q+Q
Sbjct: 171 QQQQQQQQQQQQQQQQQQQQQHPGKQAKE-----QQQQQQQQQQLAAQQLVFQQQLLQMQ 225
Query: 322 QV 323
Q+
Sbjct: 226 QL 227
Score = 38.1 bits (87), Expect = 0.012
Identities = 42/144 (29%), Positives = 58/144 (40%), Gaps = 10/144 (6%)
Query: 123 LKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQ-----QGQQTTSSTTTIQPGQ 177
+ P + Q+ ++Q V + +Q L QQ AV +Q QQ + QQ +Q Q
Sbjct: 99 ITPQQMQQILQQQVLSPQQLQ---ALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQ 155
Query: 178 IIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQ 237
Q QQ Q Q + QQ Q Q Q Q Q QQ G Q QQ Q
Sbjct: 156 Q--QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQ 213
Query: 238 QIPVQLNAGQLQYIRLAQPVSGTQ 261
Q+ Q Q+Q ++ Q + Q
Sbjct: 214 QLVFQQQLLQMQQLQQQQHLLSLQ 237
>gi|93141033 PAX interacting protein 1 [Homo sapiens]
Length = 1069
Score = 42.4 bits (98), Expect = 6e-04
Identities = 58/206 (28%), Positives = 77/206 (37%), Gaps = 29/206 (14%)
Query: 152 PTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQ 211
P +Q QQQ QQ Q ++ QPQQ MQ+ + QQ QI Q QP Q
Sbjct: 396 PETHMLQQQQQAQQQQ------QQHPVLHLQPQQ------IMQLQQQQQQQISQ-QPYPQ 442
Query: 212 A-------QQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQ 264
QQ Q Q QQ + + P QL+ Q Q QP +Q
Sbjct: 443 QPPHPFSQQQQQQQQAHPHQFSQQQLQFPQQQLHPPQQLHRPQQQL----QPFQQQHALQ 498
Query: 265 GQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQGQQQFSQFTDGQQLYQIQQVT 324
Q L + Q Q+ A + L++ Q + Q QQQ + QQ Q+Q T
Sbjct: 499 QQFHQLQQHQLQQQQLAQLQQQHSLLQQ-----QQQQQIQQQQLQRMHQQQQQQQMQSQT 553
Query: 325 MPAGQDLAQPMFIQSANQPSDGQAPQ 350
P +Q + Q Q Q Q
Sbjct: 554 APHLSQTSQALQHQVPPQQPPQQQQQ 579
Score = 38.9 bits (89), Expect = 0.007
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 119 PRDELKPPKRQEEVRQSVTPAEP----VQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQ 174
P+ +L+P ++Q ++Q + Q L QQ + +Q Q QQQ QQ Q
Sbjct: 484 PQQQLQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQQ 543
Query: 175 PGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQ 216
Q Q Q QT P Q + Q Q+ QP Q QQ Q
Sbjct: 544 QQQ----QQMQSQTAPHLSQTSQALQHQVPPQQPPQQQQQQQ 581
Score = 38.5 bits (88), Expect = 0.009
Identities = 57/183 (31%), Positives = 71/183 (38%), Gaps = 33/183 (18%)
Query: 155 VQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTT---PVTMQVGEG---QQVQIVQAQP 208
+Q Q Q Q QQ +QP QI+ Q QQ Q P Q QQ Q QA P
Sbjct: 401 LQQQQQAQQQQQQHPVLHLQPQQIMQLQQQQQQQISQQPYPQQPPHPFSQQQQQQQQAHP 460
Query: 209 QGQAQQAQSGTGQTMQVMQQI---------ITNTGEIQQIPVQLNAGQLQYIRLAQ---- 255
+QQ Q + QQ+ +QQ QL QLQ +LAQ
Sbjct: 461 HQFSQQQLQFPQQQLHPPQQLHRPQQQLQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQ 520
Query: 256 -----PVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTEV------QQG 304
Q+ Q Q+Q + QQ Q+ SQ P L +T Q Q +V QQ
Sbjct: 521 HSLLQQQQQQQIQQQQLQRMHQQQQQ-QQMQSQTAPH--LSQTSQALQHQVPPQQPPQQQ 577
Query: 305 QQQ 307
QQQ
Sbjct: 578 QQQ 580
Score = 33.9 bits (76), Expect = 0.23
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 18/111 (16%)
Query: 119 PRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQI 178
P+ +L PP++ +Q + +P Q L QQ +Q Q Q Q QQ +Q
Sbjct: 471 PQQQLHPPQQLHRPQQQL---QPFQQQHALQQQFHQLQ-QHQLQQQQLAQ----LQQQHS 522
Query: 179 IIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSG--TGQTMQVMQ 227
++ Q QQ Q + QQ+Q + Q Q Q Q+Q+ QT Q +Q
Sbjct: 523 LLQQQQQQQI--------QQQQLQRMHQQQQQQQMQSQTAPHLSQTSQALQ 565
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 42.4 bits (98), Expect = 6e-04
Identities = 59/233 (25%), Positives = 87/233 (37%), Gaps = 40/233 (17%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQ 185
P ++V + +PV T P V Q+ + +ST+ IQ +PQQ
Sbjct: 2212 PGAPQQVMTQIIRGQPVS---TAVSAPNTVSSTPGQKSLTSATSTSNIQSSASQPPRPQQ 2268
Query: 186 GQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIP--VQL 243
G QV++ AQ Q Q G V+Q TG++Q IP V +
Sbjct: 2269 G-------------QVKLTMAQ-LTQLTQGHGGNQGLTVVIQGQGQTTGQLQLIPQGVTV 2314
Query: 244 NAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTEVQQ 303
G Q + A +GT V + LAT A T ++ T
Sbjct: 2315 LPGPGQQLMQAAMPNGT-VQRFLFTPLATTATTASTT------------TTTVSTTAAGT 2361
Query: 304 GQQQFSQFTDGQQLYQIQQVTMPAGQDL------AQPMFIQSANQPSDGQAPQ 350
G+Q+ S+ + Q++ Q T+P Q AQP Q + QP PQ
Sbjct: 2362 GEQRQSKLSPQMQVH--QDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQ 2412
Score = 32.7 bits (73), Expect = 0.51
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTP-----VTMQVGEGQQVQIV 204
Q+PT + T+S+T+TI P Q ++ P G T +T +VG V
Sbjct: 2049 QKPTVIATSTTSP---TSSTTSTISPAQKVMVAPISGSVTTGTKMVLTTKVGSPATVTFQ 2105
Query: 205 QAQPQGQ-----AQQAQSGTGQTMQVMQQII----TNTGEIQQ 238
Q + Q +Q QS +G +QV Q+++ ++TG QQ
Sbjct: 2106 QNKNFHQTFATWVKQGQSNSG-VVQVQQKVLGIIPSSTGTSQQ 2147
>gi|33286444 mastermind-like 2 [Homo sapiens]
Length = 1156
Score = 42.0 bits (97), Expect = 8e-04
Identities = 40/140 (28%), Positives = 56/140 (40%), Gaps = 13/140 (9%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQ 209
QQ Q Q QQQ QQ++ I AQ QQ Q + ++ Q + QQ Q Q Q Q
Sbjct: 606 QQQQQQQQQQQQQQQQSS-----------ISAQQQQQQQSSISAQQQQQQQQQQQQQQQQ 654
Query: 210 GQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQT 269
Q QQ Q + Q Q + + + + P+ L L QP++G Q Q
Sbjct: 655 QQQQQQQQQQQPSSQPAQSLPSQ--PLLRSPLPLQQKLLLQQMQNQPIAGMGYQVSQQQR 712
Query: 270 LATNAQQGQRNASQGKPRRC 289
++ GQ P C
Sbjct: 713 QDQHSVVGQNTGPSPSPNPC 732
Score = 35.0 bits (79), Expect = 0.10
Identities = 55/233 (23%), Positives = 88/233 (37%), Gaps = 29/233 (12%)
Query: 127 KRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQP--- 183
++Q++ + S++ + Q QQ Q Q QQQ QQ +S P Q ++ P
Sbjct: 627 QQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPL 686
Query: 184 ------QQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQ 237
QQ Q P+ G G QV Q Q Q +G + T +G +
Sbjct: 687 QQKLLLQQMQNQPI---AGMGYQVSQQQRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMN 743
Query: 238 QIPVQLN---AGQLQYIRLAQPVSGTQVVQGQIQTLATN---AQQGQRNASQGKPRRCLK 291
LN G+ Q ++ Q + Q + Q Q LA A Q Q N +P K
Sbjct: 744 SQQSLLNQQLMGKKQTLQ-RQIMEQKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYK 802
Query: 292 ETLQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPS 344
+ Q Q +Q++ G +++ + Q LA P+ + P+
Sbjct: 803 D-----QRRNVGNMQPTAQYSGGS-----STISLNSNQALANPVSTHTILTPN 845
Score = 32.3 bits (72), Expect = 0.66
Identities = 46/178 (25%), Positives = 66/178 (37%), Gaps = 26/178 (14%)
Query: 182 QPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPV 241
+P+QG T P+ + Q+ P T Q Q QQ QQ
Sbjct: 550 EPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQ--------QQ--- 598
Query: 242 QLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQITQTEV 301
Q Q + Q Q Q Q Q + +AQQ Q+ S ++ ++ Q Q +
Sbjct: 599 -----QQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQ 653
Query: 302 QQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQS-------ANQPSDGQAPQVT 352
QQ QQQ Q QQ ++P+ L P+ +Q NQP G QV+
Sbjct: 654 QQQQQQQQQ---QQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQMQNQPIAGMGYQVS 708
>gi|226246533 TOX high mobility group box family member 3 isoform 2
[Homo sapiens]
Length = 571
Score = 41.6 bits (96), Expect = 0.001
Identities = 53/208 (25%), Positives = 80/208 (38%), Gaps = 18/208 (8%)
Query: 125 PPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQ 184
P Q+ + +S+ P +P+ + Q T+V + +++ G ++
Sbjct: 367 PQTLQQSLPRSIAP-KPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSM--GTTMVGSAP 423
Query: 185 QGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLN 244
Q +P Q+Q Q Q Q Q QQ Q Q Q+ QQI ++QQ Q +
Sbjct: 424 STQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQI---QQQMQQQHFQHH 480
Query: 245 AGQ---LQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQIT---- 297
Q Q L Q ++ Q+ Q Q L Q ++ SQ PR+ QIT
Sbjct: 481 MQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPSPRQHSPVASQITSPIP 540
Query: 298 -----QTEVQQGQQQFSQFTDGQQLYQI 320
Q QQ Q Q T Q L Q+
Sbjct: 541 AIGSPQPASQQHQSQIQSQTQTQVLSQV 568
Score = 35.8 bits (81), Expect = 0.060
Identities = 57/238 (23%), Positives = 93/238 (39%), Gaps = 28/238 (11%)
Query: 116 DIVPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQ--QQGQQTTSST--- 170
D + ++ + KR+ E + Y +L + A + Q + QQT +ST
Sbjct: 289 DSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLT 348
Query: 171 ------TTIQPGQIIIAQPQQGQTT--------PVTMQVGEGQ---QVQIVQAQPQGQAQ 213
T + + A PQ Q + P+TM++ Q V I P
Sbjct: 349 SSLLLNTPLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVTIAANMPSNIGA 408
Query: 214 QAQSGTGQTM--QVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLA 271
S G TM ++ + + QQ +QL Q Q + Q + Q+ Q Q+
Sbjct: 409 PLISSMGTTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQI 468
Query: 272 TNAQQGQRNASQGKPRRCLKETLQITQTEV--QQGQQQFSQFTDGQQLYQIQQVTMPA 327
QQ Q+ Q ++ L++ Q Q ++ QQ QQQ Q QQL +Q + P+
Sbjct: 469 Q--QQMQQQHFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPS 524
>gi|226054295 TOX high mobility group box family member 3 isoform 1
[Homo sapiens]
Length = 576
Score = 41.6 bits (96), Expect = 0.001
Identities = 53/208 (25%), Positives = 80/208 (38%), Gaps = 18/208 (8%)
Query: 125 PPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQ 184
P Q+ + +S+ P +P+ + Q T+V + +++ G ++
Sbjct: 372 PQTLQQSLPRSIAP-KPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSM--GTTMVGSAP 428
Query: 185 QGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLN 244
Q +P Q+Q Q Q Q Q QQ Q Q Q+ QQI ++QQ Q +
Sbjct: 429 STQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQI---QQQMQQQHFQHH 485
Query: 245 AGQ---LQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQIT---- 297
Q Q L Q ++ Q+ Q Q L Q ++ SQ PR+ QIT
Sbjct: 486 MQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPSPRQHSPVASQITSPIP 545
Query: 298 -----QTEVQQGQQQFSQFTDGQQLYQI 320
Q QQ Q Q T Q L Q+
Sbjct: 546 AIGSPQPASQQHQSQIQSQTQTQVLSQV 573
Score = 35.8 bits (81), Expect = 0.060
Identities = 57/238 (23%), Positives = 93/238 (39%), Gaps = 28/238 (11%)
Query: 116 DIVPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQ--QQGQQTTSST--- 170
D + ++ + KR+ E + Y +L + A + Q + QQT +ST
Sbjct: 294 DSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLT 353
Query: 171 ------TTIQPGQIIIAQPQQGQTT--------PVTMQVGEGQ---QVQIVQAQPQGQAQ 213
T + + A PQ Q + P+TM++ Q V I P
Sbjct: 354 SSLLLNTPLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVTIAANMPSNIGA 413
Query: 214 QAQSGTGQTM--QVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLA 271
S G TM ++ + + QQ +QL Q Q + Q + Q+ Q Q+
Sbjct: 414 PLISSMGTTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQI 473
Query: 272 TNAQQGQRNASQGKPRRCLKETLQITQTEV--QQGQQQFSQFTDGQQLYQIQQVTMPA 327
QQ Q+ Q ++ L++ Q Q ++ QQ QQQ Q QQL +Q + P+
Sbjct: 474 Q--QQMQQQHFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPS 529
>gi|67010025 Sp4 transcription factor [Homo sapiens]
Length = 784
Score = 40.8 bits (94), Expect = 0.002
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 129 QEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQP------GQIIIAQ 182
+ + +S TPA AQ + +Q G Q Q ++S +Q QI I Q
Sbjct: 356 ERTIEESQTPAATESE----AQSSSQLQPNGMQNAQDQSNSLQQVQIVGQPILQQIQIQQ 411
Query: 183 PQQG---QTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEI--Q 237
PQQ P + Q+ GQ +Q +Q QP Q Q Q+ + + +T +G+I Q
Sbjct: 412 PQQQIIQAIPPQSFQLQSGQTIQTIQQQPL-QNVQLQAVNPTQVLIRAPTLTPSGQISWQ 470
Query: 238 QIPVQ----LNAGQLQYIRLAQPVSGTQVVQGQIQTLA 271
+ VQ L+ Q+Q L+Q ++ T V TLA
Sbjct: 471 TVQVQNIQSLSNLQVQNAGLSQQLTITPVSSSGGTTLA 508
Score = 39.7 bits (91), Expect = 0.004
Identities = 63/274 (22%), Positives = 101/274 (36%), Gaps = 46/274 (16%)
Query: 70 AKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQ 129
A +++ I E A +E LQ N + A + + + IV + L+ + Q
Sbjct: 352 ASSSERTIEESQTPAATESEAQSSSQLQPNGMQNAQDQSNSLQ-QVQIVGQPILQQIQIQ 410
Query: 130 EEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQ---QG 186
+ +Q + P + Q +Q Q Q Q + P Q++I P G
Sbjct: 411 QPQQQIIQAIPPQSFQLQSGQTIQTIQQQPLQNVQ-----LQAVNPTQVLIRAPTLTPSG 465
Query: 187 QTTPVTMQVGEGQQVQIVQAQPQGQAQQ-----AQSGTGQTMQVMQQIITNTGEIQQIPV 241
Q + T+QV Q + +Q Q G +QQ S G T+ + + + P+
Sbjct: 466 QISWQTVQVQNIQSLSNLQVQNAGLSQQLTITPVSSSGGTTLAQIAPVA-----VAGAPI 520
Query: 242 QLNAGQLQYIRLAQPVS----GTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETL--- 294
LN QL + Q VS G VQ Q + + GQ+ G + + T+
Sbjct: 521 TLNTAQLASVPNLQTVSVANLGAAGVQVQGVPVTITSVAGQQQGQDGV--KVQQATIAPV 578
Query: 295 ------------------QITQTEVQQGQQQFSQ 310
Q+TQ +QQGQQ Q
Sbjct: 579 TVAVGGIANATIGAVSPDQLTQVHLQQGQQTSDQ 612
Score = 30.4 bits (67), Expect = 2.5
Identities = 66/271 (24%), Positives = 100/271 (36%), Gaps = 63/271 (23%)
Query: 129 QEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQ-QGQQTTSSTTTIQPGQI--------- 178
Q +V Q P+ VQY P V+GQQ Q T+SS+ GQI
Sbjct: 150 QFQVIQVQNPSGSVQYQVI----PQLQTVEGQQIQINPTSSSSLQDLQGQIQLISAGNNQ 205
Query: 179 -------------IIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQS------GT 219
I+AQ QT PV ++ G +Q+ Q P QAQ + G
Sbjct: 206 AILTAANRTASGNILAQNLANQTVPVQIRPGVSIPLQL-QTLPGTQAQVVTTLPINIGGV 264
Query: 220 GQTMQVMQQIITN--TGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQI---------- 267
+ V+ + TG++ Q ++G +L + T +
Sbjct: 265 TLALPVINNVAAGGGTGQVGQPAATADSGTSNGNQLVSTPTNTTTSASTMPESPSSSTTC 324
Query: 268 -----------QTLATNAQQGQ-RNASQGKPRRCLKE--TLQITQTEVQQGQQ-QFSQFT 312
TL ++A GQ + S R ++E T T++E Q Q Q +
Sbjct: 325 TTTASTSLTSSDTLVSSADTGQYASTSASSSERTIEESQTPAATESEAQSSSQLQPNGMQ 384
Query: 313 DGQ-QLYQIQQVTMPAGQDLAQPMFIQSANQ 342
+ Q Q +QQV + GQ + Q + IQ Q
Sbjct: 385 NAQDQSNSLQQVQI-VGQPILQQIQIQQPQQ 414
>gi|110347429 mediator complex subunit 12 [Homo sapiens]
Length = 2177
Score = 40.0 bits (92), Expect = 0.003
Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 14/123 (11%)
Query: 127 KRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQG 186
++Q++ +Q + QY+ QQ ++ Q QQQ QQ Q QQ
Sbjct: 2060 QQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQ----------QQQQQQ 2109
Query: 187 QTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAG 246
Q Q + QQ Q QPQ Q Q + G QT Q Q ++Q+ QL+
Sbjct: 2110 QQQQQQHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQ----TAALVRQLQQQLSNT 2165
Query: 247 QLQ 249
Q Q
Sbjct: 2166 QPQ 2168
Score = 36.6 bits (83), Expect = 0.035
Identities = 60/236 (25%), Positives = 80/236 (33%), Gaps = 53/236 (22%)
Query: 119 PRDELKPPKRQEEVRQSVTPA------EPVQYYFTLAQQPTA-VQVQGQQQGQQTTSSTT 171
P + PP + QS P+ +P ++ L Q+P+ V Q G TS+
Sbjct: 1959 PAGTMVPPSYSSQPYQSTHPSTNPTLVDPTRH---LQQRPSGYVHQQAPTYGHGLTSTQR 2015
Query: 172 TIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIIT 231
Q + P TP++ Q G V+ P+ Q QQ Q Q Q QQ
Sbjct: 2016 FSH--QTLQQTPMISTMTPMSAQ-GVQAGVRSTAILPEQQQQQQQQQQQQQQQQQQQ--- 2069
Query: 232 NTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLK 291
Q Q +IR Q Q Q L QQ Q+
Sbjct: 2070 ----------QQQQQQQYHIRQQQ----------QQQILRQQQQQQQQQ----------- 2098
Query: 292 ETLQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQ 347
Q + QQ QQQ Q Q Q QQ P Q +QP F + Q + Q
Sbjct: 2099 ------QQQQQQQQQQQQQQQQQHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQ 2148
Score = 36.6 bits (83), Expect = 0.035
Identities = 38/120 (31%), Positives = 43/120 (35%), Gaps = 8/120 (6%)
Query: 156 QVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQA 215
Q Q QQQ QQ Q Q I Q QQ Q QQ Q Q Q Q Q QQ
Sbjct: 2055 QQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQILR--------QQQQQQQQQQQQQQQQQ 2106
Query: 216 QSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQ 275
Q Q Q QQ Q P Q Q ++ Q T + Q+Q +N Q
Sbjct: 2107 QQQQQQQQQHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQTAALVRQLQQQLSNTQ 2166
Score = 36.2 bits (82), Expect = 0.046
Identities = 37/116 (31%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Query: 150 QQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQ 209
QQ Q Q QQQ QQ Q QI+ Q QQ Q Q + QQ Q Q Q
Sbjct: 2059 QQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQ 2118
Query: 210 GQAQQAQSGTGQTM---QVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQV 262
Q QQA Q Q +Q + T + QQ + Q Q + QP T +
Sbjct: 2119 QQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQTAALVRQLQ-QQLSNTQPQPSTNI 2173
Score = 31.2 bits (69), Expect = 1.5
Identities = 35/148 (23%), Positives = 55/148 (37%), Gaps = 3/148 (2%)
Query: 204 VQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVV 263
+Q +P G Q G + Q+ T +QQ P+ + + V T ++
Sbjct: 1991 LQQRPSGYVHQQAPTYGHGLTSTQRFSHQT--LQQTPMISTMTPMSAQGVQAGVRSTAIL 2048
Query: 264 QGQIQTLATNAQQGQRNASQGKPRRCLKETL-QITQTEVQQGQQQFSQFTDGQQLYQIQQ 322
Q Q QQ Q+ Q + ++ + + Q Q ++ + QQQ Q QQ Q QQ
Sbjct: 2049 PEQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQ 2108
Query: 323 VTMPAGQDLAQPMFIQSANQPSDGQAPQ 350
Q Q + QP PQ
Sbjct: 2109 QQQQQQQHQQQQQQQAAPPQPQPQSQPQ 2136
>gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sapiens]
Length = 2603
Score = 40.0 bits (92), Expect = 0.003
Identities = 68/277 (24%), Positives = 105/277 (37%), Gaps = 25/277 (9%)
Query: 74 QIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVR 133
Q +IT + + + K L++ I AI K Q L ++ D+L K +E
Sbjct: 796 QGYITNQSPESIVEEAQGKLTELEQR-IKEAIEKNAQLQSL-ELAHADQLTKEKIEE--- 850
Query: 134 QSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQT----- 188
+ T E +Q + ++ V+ + Q + QQ Q I Q QQ Q+
Sbjct: 851 LNKTREEQIQKKQKILEELQKVERELQLKTQQQLKKQYLEVKAQRIQLQQQQQQSCQHLG 910
Query: 189 --TPVTM--QVGEGQQVQIVQAQP-----QGQAQQAQSGTG--QTMQVMQQIITNTGEIQ 237
TPV + Q+ EG ++ Q P + Q AQ G Q + + Q + G +
Sbjct: 911 LLTPVGVGEQLSEGDYARLQQVDPVLLKDEPQQTAAQMGFAPIQPLAMPQALPLAAGPLP 970
Query: 238 QIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNASQGKPRRCLKETLQIT 297
+ N +LQ + + QPV G + G Q + T QQG AS P + L +TL
Sbjct: 971 PGSIA-NLTELQGVIVGQPVLGQAQLAGLGQGILTETQQGLMVAS---PAQTLNDTLDDI 1026
Query: 298 QTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQP 334
V S I Q P + P
Sbjct: 1027 MAAVSGRASAMSNTPTHSIAASISQPQTPTPSPIISP 1063
>gi|38570099 glutamine-rich 1 [Homo sapiens]
Length = 776
Score = 40.0 bits (92), Expect = 0.003
Identities = 65/258 (25%), Positives = 93/258 (36%), Gaps = 46/258 (17%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAV------------------QVQGQQQGQQTT 167
P+ Q+E + V + VQ + Q P V QVQ Q QGQ
Sbjct: 86 PQTQQEQQIQVQQPQQVQVQVQVQQSPQQVSAQLSPQLTVHQPTEQPIQVQVQIQGQAPQ 145
Query: 168 SSTTTIQPGQIIIAQPQQGQTTPVTMQ-VGEGQQVQIVQAQPQ---GQAQQAQSGTGQTM 223
S+ +IQ + P Q Q + +Q V QQ+Q + + Q QAQ GQ++
Sbjct: 146 SAAPSIQTPSLQSPSPSQLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQIQAQLVAGQSL 205
Query: 224 QVMQQI-ITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNAS 282
QQI I G + P Q + R + GT V ++ + A
Sbjct: 206 AGGQQIQIQTVGALSPPPSQQGSP-----REGERRVGTASVLQPVKKRKVDMPITVSYAI 260
Query: 283 QGKPRRCLKETLQITQTEVQQGQQQF-------SQFTDGQQLYQIQ-QVTMPAGQDLAQP 334
G+P T + QGQQQ D LY +T P G+ P
Sbjct: 261 SGQP--------VATVLAIPQGQQQSYVSLRPDLLTVDSAHLYSATGTITSPTGETWTIP 312
Query: 335 MFIQSANQPSDGQAPQVT 352
++ SA D Q +T
Sbjct: 313 VY--SAQPRGDPQQQSIT 328
Score = 37.0 bits (84), Expect = 0.027
Identities = 50/190 (26%), Positives = 69/190 (36%), Gaps = 25/190 (13%)
Query: 151 QPTAVQVQGQQQGQQTTSSTTTIQPGQII-IAQPQQGQTTPVTMQVGEGQQVQIVQAQPQ 209
Q TA QQG + +T G ++ +A P P T Q + Q Q Q Q Q
Sbjct: 46 QQTATTTMVYQQGGNCIYTDSTEVAGSLLELACPVTTSVQPQTQQEQQIQVQQPQQVQVQ 105
Query: 210 GQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQT 269
Q QQ+ QQ+ QL+ + QP+ +QGQ
Sbjct: 106 VQVQQSP--------------------QQVSAQLSPQLTVHQPTEQPIQVQVQIQGQAPQ 145
Query: 270 LATNAQQGQRNASQGKPRRCLKETLQITQTEVQQGQQ-QFSQFTDGQQLYQIQQVTMPAG 328
A + Q S P + QI VQ QQ Q ++ + +Q Q + AG
Sbjct: 146 SAAPSIQ---TPSLQSPSPSQLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQIQAQLVAG 202
Query: 329 QDLAQPMFIQ 338
Q LA IQ
Sbjct: 203 QSLAGGQQIQ 212
Score = 36.6 bits (83), Expect = 0.035
Identities = 55/220 (25%), Positives = 85/220 (38%), Gaps = 28/220 (12%)
Query: 141 PVQYYFTLAQQPTAVQV---QGQQQGQQTTSSTTTIQPGQIIIAQPQ-QGQTTPVTMQVG 196
P+ + ++ QP A + QGQQQ S +++P + + T +T G
Sbjct: 253 PITVSYAISGQPVATVLAIPQGQQQ------SYVSLRPDLLTVDSAHLYSATGTITSPTG 306
Query: 197 EGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQP 256
E + + AQP+G QQ T + Q N + P L A +L+ + +
Sbjct: 307 ETWTIPVYSAQPRGDPQQQSI----THIAIPQEAYNAVHVSGSPTALAAVKLEDDK-EKM 361
Query: 257 VSGTQVVQGQ----IQTLATN---AQQGQRNASQGKPRRCLKETLQITQTEV------QQ 303
V T VV+ +QTLA + AQ N + + T Q T V QQ
Sbjct: 362 VGTTSVVKNSHEEVVQTLANSLFPAQFMNGNIHIPVAVQAVAGTYQNTAQTVHIWDPQQQ 421
Query: 304 GQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQP 343
QQQ Q Q QQ+ + Q ++ +QP
Sbjct: 422 PQQQTPQEQTPPPQQQQQQLQVTCSAQTVQVAEVEPQSQP 461
>gi|38570097 glutamine-rich 1 [Homo sapiens]
Length = 776
Score = 40.0 bits (92), Expect = 0.003
Identities = 65/258 (25%), Positives = 93/258 (36%), Gaps = 46/258 (17%)
Query: 126 PKRQEEVRQSVTPAEPVQYYFTLAQQPTAV------------------QVQGQQQGQQTT 167
P+ Q+E + V + VQ + Q P V QVQ Q QGQ
Sbjct: 86 PQTQQEQQIQVQQPQQVQVQVQVQQSPQQVSAQLSPQLTVHQPTEQPIQVQVQIQGQAPQ 145
Query: 168 SSTTTIQPGQIIIAQPQQGQTTPVTMQ-VGEGQQVQIVQAQPQ---GQAQQAQSGTGQTM 223
S+ +IQ + P Q Q + +Q V QQ+Q + + Q QAQ GQ++
Sbjct: 146 SAAPSIQTPSLQSPSPSQLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQIQAQLVAGQSL 205
Query: 224 QVMQQI-ITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQGQRNAS 282
QQI I G + P Q + R + GT V ++ + A
Sbjct: 206 AGGQQIQIQTVGALSPPPSQQGSP-----REGERRVGTASVLQPVKKRKVDMPITVSYAI 260
Query: 283 QGKPRRCLKETLQITQTEVQQGQQQF-------SQFTDGQQLYQIQ-QVTMPAGQDLAQP 334
G+P T + QGQQQ D LY +T P G+ P
Sbjct: 261 SGQP--------VATVLAIPQGQQQSYVSLRPDLLTVDSAHLYSATGTITSPTGETWTIP 312
Query: 335 MFIQSANQPSDGQAPQVT 352
++ SA D Q +T
Sbjct: 313 VY--SAQPRGDPQQQSIT 328
Score = 37.0 bits (84), Expect = 0.027
Identities = 50/190 (26%), Positives = 69/190 (36%), Gaps = 25/190 (13%)
Query: 151 QPTAVQVQGQQQGQQTTSSTTTIQPGQII-IAQPQQGQTTPVTMQVGEGQQVQIVQAQPQ 209
Q TA QQG + +T G ++ +A P P T Q + Q Q Q Q Q
Sbjct: 46 QQTATTTMVYQQGGNCIYTDSTEVAGSLLELACPVTTSVQPQTQQEQQIQVQQPQQVQVQ 105
Query: 210 GQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQT 269
Q QQ+ QQ+ QL+ + QP+ +QGQ
Sbjct: 106 VQVQQSP--------------------QQVSAQLSPQLTVHQPTEQPIQVQVQIQGQAPQ 145
Query: 270 LATNAQQGQRNASQGKPRRCLKETLQITQTEVQQGQQ-QFSQFTDGQQLYQIQQVTMPAG 328
A + Q S P + QI VQ QQ Q ++ + +Q Q + AG
Sbjct: 146 SAAPSIQ---TPSLQSPSPSQLQAAQIQVQHVQAAQQIQAAEIPEEHIPHQQIQAQLVAG 202
Query: 329 QDLAQPMFIQ 338
Q LA IQ
Sbjct: 203 QSLAGGQQIQ 212
Score = 36.6 bits (83), Expect = 0.035
Identities = 55/220 (25%), Positives = 85/220 (38%), Gaps = 28/220 (12%)
Query: 141 PVQYYFTLAQQPTAVQV---QGQQQGQQTTSSTTTIQPGQIIIAQPQ-QGQTTPVTMQVG 196
P+ + ++ QP A + QGQQQ S +++P + + T +T G
Sbjct: 253 PITVSYAISGQPVATVLAIPQGQQQ------SYVSLRPDLLTVDSAHLYSATGTITSPTG 306
Query: 197 EGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQP 256
E + + AQP+G QQ T + Q N + P L A +L+ + +
Sbjct: 307 ETWTIPVYSAQPRGDPQQQSI----THIAIPQEAYNAVHVSGSPTALAAVKLEDDK-EKM 361
Query: 257 VSGTQVVQGQ----IQTLATN---AQQGQRNASQGKPRRCLKETLQITQTEV------QQ 303
V T VV+ +QTLA + AQ N + + T Q T V QQ
Sbjct: 362 VGTTSVVKNSHEEVVQTLANSLFPAQFMNGNIHIPVAVQAVAGTYQNTAQTVHIWDPQQQ 421
Query: 304 GQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQP 343
QQQ Q Q QQ+ + Q ++ +QP
Sbjct: 422 PQQQTPQEQTPPPQQQQQQLQVTCSAQTVQVAEVEPQSQP 461
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.127 0.350
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,285,837
Number of Sequences: 37866
Number of extensions: 529166
Number of successful extensions: 2498
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 1978
Number of HSP's gapped (non-prelim): 385
length of query: 354
length of database: 18,247,518
effective HSP length: 103
effective length of query: 251
effective length of database: 14,347,320
effective search space: 3601177320
effective search space used: 3601177320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.