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Search of human proteins with 21717832
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21717832 sperm equatorial segment protein 1 [Homo sapiens]
(350 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21717832 sperm equatorial segment protein 1 [Homo sapiens] 699 0.0
gi|153792110 HEG homolog 1 [Homo sapiens] 42 8e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 39 0.009
gi|16554449 zonadhesin isoform 3 [Homo sapiens] 38 0.015
gi|27881494 zonadhesin isoform 6 [Homo sapiens] 38 0.015
gi|239740955 PREDICTED: similar to c114 SLIT-like testicular pro... 35 0.077
gi|239740953 PREDICTED: similar to c114 SLIT-like testicular pro... 35 0.077
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 35 0.10
gi|83367077 mucin 16 [Homo sapiens] 35 0.13
gi|116325993 c114 SLIT-like testicular protein [Homo sapiens] 35 0.13
gi|110665701 leucine rich repeat containing 37A [Homo sapiens] 35 0.13
gi|75677612 leucine rich repeat containing 37, member A3 [Homo s... 34 0.17
gi|223941846 zinc finger protein 652 [Homo sapiens] 34 0.22
gi|7662384 zinc finger protein 652 [Homo sapiens] 34 0.22
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof... 34 0.22
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof... 34 0.22
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 34 0.22
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 33 0.29
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 33 0.29
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 33 0.29
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 33 0.29
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 33 0.29
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 33 0.29
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 33 0.29
gi|239758038 PREDICTED: mucin 3A, cell surface associated, parti... 33 0.29
gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens] 33 0.29
gi|150170670 piccolo isoform 2 [Homo sapiens] 33 0.29
gi|150378539 piccolo isoform 1 [Homo sapiens] 33 0.29
gi|21264337 ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... 33 0.38
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 33 0.38
>gi|21717832 sperm equatorial segment protein 1 [Homo sapiens]
Length = 350
Score = 699 bits (1805), Expect = 0.0
Identities = 350/350 (100%), Positives = 350/350 (100%)
Query: 1 MKPLVLLVALLLWPSSVPAYPSITVTPDEEQNLNHYIQVLENLVRSVPSGEPGREKKSNS 60
MKPLVLLVALLLWPSSVPAYPSITVTPDEEQNLNHYIQVLENLVRSVPSGEPGREKKSNS
Sbjct: 1 MKPLVLLVALLLWPSSVPAYPSITVTPDEEQNLNHYIQVLENLVRSVPSGEPGREKKSNS 60
Query: 61 PKHVYSIASKGSKFKELVTHGDASTENDVLTNPISEETTTFPTGGFTPEIGKKKHTESTP 120
PKHVYSIASKGSKFKELVTHGDASTENDVLTNPISEETTTFPTGGFTPEIGKKKHTESTP
Sbjct: 61 PKHVYSIASKGSKFKELVTHGDASTENDVLTNPISEETTTFPTGGFTPEIGKKKHTESTP 120
Query: 121 FWSIKPNNVSIVLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPVVTESSTSPYVTSYKSP 180
FWSIKPNNVSIVLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPVVTESSTSPYVTSYKSP
Sbjct: 121 FWSIKPNNVSIVLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPVVTESSTSPYVTSYKSP 180
Query: 181 VTTLDKSTGIGISTESEDVPQLSGETAIEKPEEFGKHPESWNNDDILKKILDINSQVQQA 240
VTTLDKSTGIGISTESEDVPQLSGETAIEKPEEFGKHPESWNNDDILKKILDINSQVQQA
Sbjct: 181 VTTLDKSTGIGISTESEDVPQLSGETAIEKPEEFGKHPESWNNDDILKKILDINSQVQQA 240
Query: 241 LLSDTSNPAYREDIEASKDHLKRSLALAAAAEHKLKTMYKSQLLPVGRTSNKIDDIETVI 300
LLSDTSNPAYREDIEASKDHLKRSLALAAAAEHKLKTMYKSQLLPVGRTSNKIDDIETVI
Sbjct: 241 LLSDTSNPAYREDIEASKDHLKRSLALAAAAEHKLKTMYKSQLLPVGRTSNKIDDIETVI 300
Query: 301 NMLCNSRSKLYEYLDIKCVPPEMREKAATVFNTLKNMCRSRRVTALLKVY 350
NMLCNSRSKLYEYLDIKCVPPEMREKAATVFNTLKNMCRSRRVTALLKVY
Sbjct: 301 NMLCNSRSKLYEYLDIKCVPPEMREKAATVFNTLKNMCRSRRVTALLKVY 350
>gi|153792110 HEG homolog 1 [Homo sapiens]
Length = 1381
Score = 42.0 bits (97), Expect = 8e-04
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 93 PISEETTTFPTGGFTPEIGKKKHTESTPFWSIKPNNVSIVLHAEEPYIENEEPEPEPEPA 152
P+S TT P TP + + + T T F + + +LH+ + + P E
Sbjct: 730 PLSVSQTTLPQSSSTPVLPRARETPVTSFQTSTMTSFMTMLHSSQTADLKSQSTPHQEKV 789
Query: 153 AKQTEAPRMLPVVTESSTSPYVTSYKSPVTTLDKSTGIGISTESEDVPQLS 203
++++P ++ + TE ST T+ P + + ST + S ++ Q+S
Sbjct: 790 ITESKSPSLVSLPTE-STKAVTTNSPLPPSLTESSTEQTLPATSTNLAQMS 839
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 38.5 bits (88), Expect = 0.009
Identities = 39/182 (21%), Positives = 67/182 (36%), Gaps = 23/182 (12%)
Query: 51 EPGREKKSNSPKHVYSIASKGSKFKELVTHGDASTENDVLTNPISEETTTFPTGGFTPEI 110
+P +E++S+S S +S S + S+ +D E ++ P PE+
Sbjct: 2525 QPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSD-------SEGSSLPV---QPEV 2574
Query: 111 GKKKHTESTPFWSIKPNNVSIVLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPVVTESST 170
K+ TP +E E PEP P +++ + + SS+
Sbjct: 2575 ALKRVPSPTPA-------------PKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSS 2621
Query: 171 SPYVTSYKSPVTTLDKSTGIGISTESEDVPQLSGETAIEKPEEFGKHPESWNNDDILKKI 230
S +S S ++ S+ S+ S P G A+ KP K P +K
Sbjct: 2622 SSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKP 2681
Query: 231 LD 232
+D
Sbjct: 2682 ID 2683
>gi|16554449 zonadhesin isoform 3 [Homo sapiens]
Length = 2812
Score = 37.7 bits (86), Expect = 0.015
Identities = 52/205 (25%), Positives = 76/205 (37%), Gaps = 29/205 (14%)
Query: 26 TPDEEQNLNHYIQVLENLVRSVPSGEPG--REKKSNSPKHVYSIASKGSKFKELVTHGDA 83
TP EE + V+ S+P+ +P EK + S + K + E T
Sbjct: 663 TPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKPTISMEETIISTEKPTISPEKPTIPTE 722
Query: 84 STENDVLTNPISEETTTFPTGGFT-----PEIGKKKHTESTPFWSIKPNNVSI------- 131
+ IS E T PT T P I +K T T +I P ++I
Sbjct: 723 KPTIPTEKSTISPEKPTTPTEKPTIPTEKPTISPEKPTTPTEKPTISPEKLTIPTEKPTI 782
Query: 132 -----VLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPVVTESSTSPYVTSYKSPVTTLDK 186
+ E+P I EEP E TE P + E T P + T++++
Sbjct: 783 PTEKPTIPTEKPTISTEEPTTPTEETTISTEKP---SIPMEKPTLP----TEETTTSVEE 835
Query: 187 STGIGISTESEDVPQLSGETAIEKP 211
+T ISTE +P + EKP
Sbjct: 836 TT---ISTEKLTIPMEKPTISTEKP 857
Score = 34.3 bits (77), Expect = 0.17
Identities = 46/167 (27%), Positives = 66/167 (39%), Gaps = 21/167 (12%)
Query: 46 SVPSGEPG-REKKSNSPKHVYSIASKGSKFKELVTHGDASTENDVLTNPISEETTTFPTG 104
++PS +P +K P +I S+ K ++ + + T P E TT+
Sbjct: 620 TIPSEKPTILTEKPTIPSEKPTIPSE----KPTISTEKPTVPTEEPTTPTEETTTSMEE- 674
Query: 105 GFTPEIGKKKHTESTPFWSIKPNNVSIVLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPV 164
P I +K + T SI +I + EE I E+P PE TE P +
Sbjct: 675 ---PVIPTEKPSIPTEKPSIPTEKPTISM--EETIISTEKPTISPEKPTIPTEKP---TI 726
Query: 165 VTESSTSPYVTSYKSPVTTLDKSTGIGISTESEDVPQLSGETAIEKP 211
TE ST S + P T +K T I TE + T EKP
Sbjct: 727 PTEKST----ISPEKPTTPTEKPT---IPTEKPTISPEKPTTPTEKP 766
Score = 30.8 bits (68), Expect = 1.9
Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 8/122 (6%)
Query: 94 ISEETTTFPTGGFTPEIGKKKHTESTPFWSIKPNNVSIVLHAEEPYIENEEPEPEPEPAA 153
IS E T PT T I +K T P + + + E+P I E+P E
Sbjct: 866 ISPEKLTIPTEKLT--IPTEKPT--IPIEETTISTEKLTIPTEKPTISPEKPTISTEKPT 921
Query: 154 KQTEAPRMLPVVTESSTSPYVTSYKSPVTTLDKST----GIGISTESEDVPQLSGETAIE 209
TE P + T ST + P + +K T ISTE +P E
Sbjct: 922 IPTEKPTIPTEETTISTEKLTIPTEKPTISPEKLTIPTEKPTISTEKPTIPTEKLTIPTE 981
Query: 210 KP 211
KP
Sbjct: 982 KP 983
Score = 30.4 bits (67), Expect = 2.5
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 16/115 (13%)
Query: 94 ISEETTTFPTGGFTPEIGKKKHT---ESTPFWSIKPNNVSI--VLHAEEPYIENEEPEPE 148
+ +E T PT P I +K T E S KP S + E+P I +E+P
Sbjct: 586 VPKEKPTIPTE--KPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIP 643
Query: 149 PEPAAKQTEAPRMLPVVTESSTSP---YVTSYKSPVTTLDKSTGIGISTESEDVP 200
E TE P V TE T+P TS + PV +K + I TE +P
Sbjct: 644 SEKPTISTEKP---TVPTEEPTTPTEETTTSMEEPVIPTEKPS---IPTEKPSIP 692
>gi|27881494 zonadhesin isoform 6 [Homo sapiens]
Length = 2721
Score = 37.7 bits (86), Expect = 0.015
Identities = 52/205 (25%), Positives = 76/205 (37%), Gaps = 29/205 (14%)
Query: 26 TPDEEQNLNHYIQVLENLVRSVPSGEPG--REKKSNSPKHVYSIASKGSKFKELVTHGDA 83
TP EE + V+ S+P+ +P EK + S + K + E T
Sbjct: 663 TPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKPTISMEETIISTEKPTISPEKPTIPTE 722
Query: 84 STENDVLTNPISEETTTFPTGGFT-----PEIGKKKHTESTPFWSIKPNNVSI------- 131
+ IS E T PT T P I +K T T +I P ++I
Sbjct: 723 KPTIPTEKSTISPEKPTTPTEKPTIPTEKPTISPEKPTTPTEKPTISPEKLTIPTEKPTI 782
Query: 132 -----VLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPVVTESSTSPYVTSYKSPVTTLDK 186
+ E+P I EEP E TE P + E T P + T++++
Sbjct: 783 PTEKPTIPTEKPTISTEEPTTPTEETTISTEKP---SIPMEKPTLP----TEETTTSVEE 835
Query: 187 STGIGISTESEDVPQLSGETAIEKP 211
+T ISTE +P + EKP
Sbjct: 836 TT---ISTEKLTIPMEKPTISTEKP 857
Score = 34.3 bits (77), Expect = 0.17
Identities = 46/167 (27%), Positives = 66/167 (39%), Gaps = 21/167 (12%)
Query: 46 SVPSGEPG-REKKSNSPKHVYSIASKGSKFKELVTHGDASTENDVLTNPISEETTTFPTG 104
++PS +P +K P +I S+ K ++ + + T P E TT+
Sbjct: 620 TIPSEKPTILTEKPTIPSEKPTIPSE----KPTISTEKPTVPTEEPTTPTEETTTSMEE- 674
Query: 105 GFTPEIGKKKHTESTPFWSIKPNNVSIVLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPV 164
P I +K + T SI +I + EE I E+P PE TE P +
Sbjct: 675 ---PVIPTEKPSIPTEKPSIPTEKPTISM--EETIISTEKPTISPEKPTIPTEKP---TI 726
Query: 165 VTESSTSPYVTSYKSPVTTLDKSTGIGISTESEDVPQLSGETAIEKP 211
TE ST S + P T +K T I TE + T EKP
Sbjct: 727 PTEKST----ISPEKPTTPTEKPT---IPTEKPTISPEKPTTPTEKP 766
Score = 30.8 bits (68), Expect = 1.9
Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 8/122 (6%)
Query: 94 ISEETTTFPTGGFTPEIGKKKHTESTPFWSIKPNNVSIVLHAEEPYIENEEPEPEPEPAA 153
IS E T PT T I +K T P + + + E+P I E+P E
Sbjct: 866 ISPEKLTIPTEKLT--IPTEKPT--IPIEETTISTEKLTIPTEKPTISPEKPTISTEKPT 921
Query: 154 KQTEAPRMLPVVTESSTSPYVTSYKSPVTTLDKST----GIGISTESEDVPQLSGETAIE 209
TE P + T ST + P + +K T ISTE +P E
Sbjct: 922 IPTEKPTIPTEETTISTEKLTIPTEKPTISPEKLTIPTEKPTISTEKPTIPTEKLTIPTE 981
Query: 210 KP 211
KP
Sbjct: 982 KP 983
Score = 30.4 bits (67), Expect = 2.5
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 16/115 (13%)
Query: 94 ISEETTTFPTGGFTPEIGKKKHT---ESTPFWSIKPNNVSI--VLHAEEPYIENEEPEPE 148
+ +E T PT P I +K T E S KP S + E+P I +E+P
Sbjct: 586 VPKEKPTIPTE--KPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIP 643
Query: 149 PEPAAKQTEAPRMLPVVTESSTSP---YVTSYKSPVTTLDKSTGIGISTESEDVP 200
E TE P V TE T+P TS + PV +K + I TE +P
Sbjct: 644 SEKPTISTEKP---TVPTEEPTTPTEETTTSMEEPVIPTEKPS---IPTEKPSIP 692
>gi|239740955 PREDICTED: similar to c114 SLIT-like testicular
protein isoform 1 [Homo sapiens]
Length = 1635
Score = 35.4 bits (80), Expect = 0.077
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 9/117 (7%)
Query: 55 EKKSNSPKHVYSIASKGSKFKELVTHGDASTENDVLTNPISEETTTFPTGGFTPEIGKKK 114
+K P +S+A ++L T ++ L N S T +P G PE+ K
Sbjct: 148 KKLKKDPAQRWSLAEIIGIIRQLST---PQSQKQTLQNEYSSTDTPYP-GSLPPELRVKS 203
Query: 115 HTESTPFWSIKPNNVSIVLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPVVTESSTS 171
P + P+ + EP +N E + + ++ Q EAP LP + E S
Sbjct: 204 DEPPGPSEQVGPSQFHL-----EPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPS 255
>gi|239740953 PREDICTED: similar to c114 SLIT-like testicular
protein isoform 2 [Homo sapiens]
Length = 1700
Score = 35.4 bits (80), Expect = 0.077
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 9/117 (7%)
Query: 55 EKKSNSPKHVYSIASKGSKFKELVTHGDASTENDVLTNPISEETTTFPTGGFTPEIGKKK 114
+K P +S+A ++L T ++ L N S T +P G PE+ K
Sbjct: 148 KKLKKDPAQRWSLAEIIGIIRQLST---PQSQKQTLQNEYSSTDTPYP-GSLPPELRVKS 203
Query: 115 HTESTPFWSIKPNNVSIVLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPVVTESSTS 171
P + P+ + EP +N E + + ++ Q EAP LP + E S
Sbjct: 204 DEPPGPSEQVGPSQFHL-----EPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPS 255
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 35.0 bits (79), Expect = 0.10
Identities = 38/132 (28%), Positives = 51/132 (38%), Gaps = 13/132 (9%)
Query: 93 PISE---ETTTFPTGGFTPEIGKKKHTESTPFWSIKPNNVSIVLHAEEPYIE---NEEPE 146
PI E E P T E + +TE TP + +P + A EP E PE
Sbjct: 53 PIPEPCPELAPGPCPEATSESATELYTEPTPEPATEPASEPAPEPATEPAPEPATEPAPE 112
Query: 147 PEPEPAAKQTEAPRMLPVVTESSTSPYVTSYKSPVTTLDKSTGIGISTESEDVPQLSGET 206
P PEPA + P P + ES P +P T + + + E V +L+ E
Sbjct: 113 PAPEPATESAPEPTPEPAL-ESVPEP------APELTPEVAPELAPEPTPEPVTELAPEF 165
Query: 207 AIEKPEEFGKHP 218
E EF P
Sbjct: 166 CPEAAPEFRPSP 177
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 34.7 bits (78), Expect = 0.13
Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 8/128 (6%)
Query: 68 ASKGSKFKELVTHGDASTENDVLTNPISEETTTFPTGGFTPEIGKKKHTESTPFWSIKPN 127
A S ++ G ++T+ + + TFPT +P +E+T W P
Sbjct: 11301 AESSSAISTTISPGIPGVLTSLVTSSGRDISATFPTVPESPH-----ESEATASWVTHPA 11355
Query: 128 NVSIVLHAEEPYIENEEPEPEPEPAAKQ-TEAPRMLPVVTESSTSPYVTSYKSPVTTLDK 186
S + P + EP+ P A EA P +T S P + + S VT+
Sbjct: 11356 VTSTTVPRTTPNYSHSEPDTTPSIATSPGAEATSDFPTITVSPDVPDMVT--SQVTSSGT 11413
Query: 187 STGIGIST 194
T I I T
Sbjct: 11414 DTSITIPT 11421
>gi|116325993 c114 SLIT-like testicular protein [Homo sapiens]
Length = 1700
Score = 34.7 bits (78), Expect = 0.13
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 9/117 (7%)
Query: 55 EKKSNSPKHVYSIASKGSKFKELVTHGDASTENDVLTNPISEETTTFPTGGFTPEIGKKK 114
+K P +S+A ++L T ++ L N S T +P G PE+ K
Sbjct: 148 KKLKKDPAQRWSLAEIIGITRQLST---PQSQKQTLQNEYSSTDTPYP-GSLPPELRVKS 203
Query: 115 HTESTPFWSIKPNNVSIVLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPVVTESSTS 171
P + P+ + EP +N E + + ++ Q EAP LP + E S
Sbjct: 204 DEPPGPSEQVGPSQFHL-----EPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPS 255
>gi|110665701 leucine rich repeat containing 37A [Homo sapiens]
Length = 1700
Score = 34.7 bits (78), Expect = 0.13
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 9/117 (7%)
Query: 55 EKKSNSPKHVYSIASKGSKFKELVTHGDASTENDVLTNPISEETTTFPTGGFTPEIGKKK 114
+K P +S+A ++L T ++ L N S T +P G PE+ K
Sbjct: 148 KKLKKDPAQRWSLAEIIGITRQLST---PQSQKQTLQNEYSSTDTPYP-GSLPPELRVKS 203
Query: 115 HTESTPFWSIKPNNVSIVLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPVVTESSTS 171
P + P+ + EP +N E + + ++ Q EAP LP + E S
Sbjct: 204 DEPPGPSEQVGPSQFHL-----EPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPS 255
>gi|75677612 leucine rich repeat containing 37, member A3 [Homo
sapiens]
Length = 1634
Score = 34.3 bits (77), Expect = 0.17
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 9/117 (7%)
Query: 55 EKKSNSPKHVYSIASKGSKFKELVTHGDASTENDVLTNPISEETTTFPTGGFTPEIGKKK 114
+K P +S+A +L T ++ L N S T +P G PE+ K
Sbjct: 148 KKLKKDPAQRWSLAEIIGIIHQLST---PQSQKQTLQNEYSSTDTPYP-GSLPPELRVKS 203
Query: 115 HTESTPFWSIKPNNVSIVLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPVVTESSTS 171
P + P+ + EP +N E + + ++ Q EAP LP + E S
Sbjct: 204 DEPPGPSEQVGPSQFHL-----EPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPS 255
>gi|223941846 zinc finger protein 652 [Homo sapiens]
Length = 606
Score = 33.9 bits (76), Expect = 0.22
Identities = 45/206 (21%), Positives = 96/206 (46%), Gaps = 14/206 (6%)
Query: 54 REKKSNSPKHVYSIASKGSKFKELVT---HGDASTENDVLTNPISEETTTFPTGGFTPEI 110
+E N HV +A + S+ ++ + HG A+ E D+ T E+ + P
Sbjct: 9 QELVENCAVHVAGMAQEDSRRGQVPSSFYHG-ANQELDLSTKVYKRESGS-PYSVLVDTK 66
Query: 111 GKKKH---TESTPFWSIKPNNVSIVLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPVVTE 167
K H TE P++ + VS V +E +++ E E E + + E +++ V
Sbjct: 67 MSKPHLHETEEQPYFR-ETRAVSDVHAVKEDRENSDDTEEEEEEVSYKRE--QIIVEVNL 123
Query: 168 SSTSPYVTSYKSPVTTLDKSTGIGISTESEDVPQLSGETAIEKPEEFGKHPESWNNDDIL 227
++ + V+ + V++ K T + + T SE+ + S E A + ++G++ + + I+
Sbjct: 124 NNQTLNVSKGEKGVSSQSKETPV-LKTSSEEEEEESEEEATDDSNDYGENEKQKKKEKIV 182
Query: 228 KKILDINSQVQQA--LLSDTSNPAYR 251
+K+ + ++A + + T++P R
Sbjct: 183 EKVSVTQRRTRRAASVAAATTSPTPR 208
>gi|7662384 zinc finger protein 652 [Homo sapiens]
Length = 606
Score = 33.9 bits (76), Expect = 0.22
Identities = 45/206 (21%), Positives = 96/206 (46%), Gaps = 14/206 (6%)
Query: 54 REKKSNSPKHVYSIASKGSKFKELVT---HGDASTENDVLTNPISEETTTFPTGGFTPEI 110
+E N HV +A + S+ ++ + HG A+ E D+ T E+ + P
Sbjct: 9 QELVENCAVHVAGMAQEDSRRGQVPSSFYHG-ANQELDLSTKVYKRESGS-PYSVLVDTK 66
Query: 111 GKKKH---TESTPFWSIKPNNVSIVLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPVVTE 167
K H TE P++ + VS V +E +++ E E E + + E +++ V
Sbjct: 67 MSKPHLHETEEQPYFR-ETRAVSDVHAVKEDRENSDDTEEEEEEVSYKRE--QIIVEVNL 123
Query: 168 SSTSPYVTSYKSPVTTLDKSTGIGISTESEDVPQLSGETAIEKPEEFGKHPESWNNDDIL 227
++ + V+ + V++ K T + + T SE+ + S E A + ++G++ + + I+
Sbjct: 124 NNQTLNVSKGEKGVSSQSKETPV-LKTSSEEEEEESEEEATDDSNDYGENEKQKKKEKIV 182
Query: 228 KKILDINSQVQQA--LLSDTSNPAYR 251
+K+ + ++A + + T++P R
Sbjct: 183 EKVSVTQRRTRRAASVAAATTSPTPR 208
>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
[Homo sapiens]
Length = 6907
Score = 33.9 bits (76), Expect = 0.22
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 18/119 (15%)
Query: 221 WNNDDILKKILDINSQVQQALLSDTSNPAYREDIEASKDHLKRSLALAAAAEHKLKTMYK 280
+ N+++LK I D+ SQ+ + L D + PA + H K+SL K+ Y+
Sbjct: 1434 FKNNELLKNIQDVQSQISKIGLKDPTVPAVK--------HRKKSLIRL----DKVLDEYE 1481
Query: 281 SQLLPVGRTSNKI----DDIETVINMLCNSRSKLYEYLDIKCVPPEMREKAATVFNTLK 335
+ + +N + D E +N C + L+E + K + E E+ V LK
Sbjct: 1482 EEKRHLQEMANSLPHFKDGREKTVNQQCQNTVVLWE--NTKALVTECLEQCGRVLELLK 1538
>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
[Homo sapiens]
Length = 6885
Score = 33.9 bits (76), Expect = 0.22
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 18/119 (15%)
Query: 221 WNNDDILKKILDINSQVQQALLSDTSNPAYREDIEASKDHLKRSLALAAAAEHKLKTMYK 280
+ N+++LK I D+ SQ+ + L D + PA + H K+SL K+ Y+
Sbjct: 1434 FKNNELLKNIQDVQSQISKIGLKDPTVPAVK--------HRKKSLIRL----DKVLDEYE 1481
Query: 281 SQLLPVGRTSNKI----DDIETVINMLCNSRSKLYEYLDIKCVPPEMREKAATVFNTLK 335
+ + +N + D E +N C + L+E + K + E E+ V LK
Sbjct: 1482 EEKRHLQEMANSLPHFKDGREKTVNQQCQNTVVLWE--NTKALVTECLEQCGRVLELLK 1538
>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
Length = 987
Score = 33.9 bits (76), Expect = 0.22
Identities = 53/208 (25%), Positives = 72/208 (34%), Gaps = 38/208 (18%)
Query: 2 KPLVLLVALLLWPSSVPAYPSITVTPDEEQNLNHYIQVLENLVRSVPSGEP------GRE 55
KP L+ L+ PS VPA + T P Q + S PS P G +
Sbjct: 391 KPPTTLLGLIPAPSMVPA--TDTKAPPTLQAET----ATKPQATSAPSPAPKQSFLFGTQ 444
Query: 56 KKSNSPKHVYSIASKGSKFKELVTHGDASTENDVLTNPISEETTTFPTGGFTPEIGKKKH 115
S S + +S FK + T P SE+ P G P +
Sbjct: 445 NTSPSSPAAPAASSASPMFKPIFT-----------APPKSEKEGPTPPG---PSV----- 485
Query: 116 TESTPFWSIKPNNVSIVLHAEEPYIENEEPE---PEPEPAAKQTEAPRMLPVVTESSTSP 172
T + P S P S +P + P P P P KQT P P ++T+P
Sbjct: 486 TATAPSSSSLPTTTSTTAPTFQPVFSSMGPPASVPLPAPFFKQTTTPATAP----TTTAP 541
Query: 173 YVTSYKSPVTTLDKSTGIGISTESEDVP 200
T S + + T ST+S P
Sbjct: 542 LFTGLASATSAVAPITSASPSTDSASKP 569
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 33.5 bits (75), Expect = 0.29
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 16/143 (11%)
Query: 31 QNLNHYIQVLENLVRSVPSGEPGREKK--------SNSPKHVYSIASKGSKFKELVTHGD 82
Q + Y+ L LVR + + +EKK N+ +I G E
Sbjct: 555 QQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDE------ 608
Query: 83 ASTENDVLTNPISEETTTFPTGGFTPEIGK-KKHTESTPFWSIKPNNVSIVLHAEEPYIE 141
S +D+ I E+ TG P+ G+ + E P + + P + S +EE E
Sbjct: 609 TSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEE 668
Query: 142 NEEPEPE-PEPAAKQTEAPRMLP 163
EE +P+ +P E + +P
Sbjct: 669 EEEEQPQAAQPPTLPVEEKKKIP 691
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 33.5 bits (75), Expect = 0.29
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 16/143 (11%)
Query: 31 QNLNHYIQVLENLVRSVPSGEPGREKK--------SNSPKHVYSIASKGSKFKELVTHGD 82
Q + Y+ L LVR + + +EKK N+ +I G E
Sbjct: 555 QQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDE------ 608
Query: 83 ASTENDVLTNPISEETTTFPTGGFTPEIGK-KKHTESTPFWSIKPNNVSIVLHAEEPYIE 141
S +D+ I E+ TG P+ G+ + E P + + P + S +EE E
Sbjct: 609 TSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEE 668
Query: 142 NEEPEPE-PEPAAKQTEAPRMLP 163
EE +P+ +P E + +P
Sbjct: 669 EEEEQPQAAQPPTLPVEEKKKIP 691
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 33.5 bits (75), Expect = 0.29
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 16/143 (11%)
Query: 31 QNLNHYIQVLENLVRSVPSGEPGREKK--------SNSPKHVYSIASKGSKFKELVTHGD 82
Q + Y+ L LVR + + +EKK N+ +I G E
Sbjct: 555 QQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDE------ 608
Query: 83 ASTENDVLTNPISEETTTFPTGGFTPEIGK-KKHTESTPFWSIKPNNVSIVLHAEEPYIE 141
S +D+ I E+ TG P+ G+ + E P + + P + S +EE E
Sbjct: 609 TSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEE 668
Query: 142 NEEPEPE-PEPAAKQTEAPRMLP 163
EE +P+ +P E + +P
Sbjct: 669 EEEEQPQAAQPPTLPVEEKKKIP 691
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 33.5 bits (75), Expect = 0.29
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 16/143 (11%)
Query: 31 QNLNHYIQVLENLVRSVPSGEPGREKK--------SNSPKHVYSIASKGSKFKELVTHGD 82
Q + Y+ L LVR + + +EKK N+ +I G E
Sbjct: 555 QQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDE------ 608
Query: 83 ASTENDVLTNPISEETTTFPTGGFTPEIGK-KKHTESTPFWSIKPNNVSIVLHAEEPYIE 141
S +D+ I E+ TG P+ G+ + E P + + P + S +EE E
Sbjct: 609 TSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEE 668
Query: 142 NEEPEPE-PEPAAKQTEAPRMLP 163
EE +P+ +P E + +P
Sbjct: 669 EEEEQPQAAQPPTLPVEEKKKIP 691
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 33.5 bits (75), Expect = 0.29
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 16/143 (11%)
Query: 31 QNLNHYIQVLENLVRSVPSGEPGREKK--------SNSPKHVYSIASKGSKFKELVTHGD 82
Q + Y+ L LVR + + +EKK N+ +I G E
Sbjct: 555 QQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDE------ 608
Query: 83 ASTENDVLTNPISEETTTFPTGGFTPEIGK-KKHTESTPFWSIKPNNVSIVLHAEEPYIE 141
S +D+ I E+ TG P+ G+ + E P + + P + S +EE E
Sbjct: 609 TSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEE 668
Query: 142 NEEPEPE-PEPAAKQTEAPRMLP 163
EE +P+ +P E + +P
Sbjct: 669 EEEEQPQAAQPPTLPVEEKKKIP 691
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 33.5 bits (75), Expect = 0.29
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 16/143 (11%)
Query: 31 QNLNHYIQVLENLVRSVPSGEPGREKK--------SNSPKHVYSIASKGSKFKELVTHGD 82
Q + Y+ L LVR + + +EKK N+ +I G E
Sbjct: 555 QQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDE------ 608
Query: 83 ASTENDVLTNPISEETTTFPTGGFTPEIGK-KKHTESTPFWSIKPNNVSIVLHAEEPYIE 141
S +D+ I E+ TG P+ G+ + E P + + P + S +EE E
Sbjct: 609 TSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEE 668
Query: 142 NEEPEPE-PEPAAKQTEAPRMLP 163
EE +P+ +P E + +P
Sbjct: 669 EEEEQPQAAQPPTLPVEEKKKIP 691
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 33.5 bits (75), Expect = 0.29
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 16/143 (11%)
Query: 31 QNLNHYIQVLENLVRSVPSGEPGREKK--------SNSPKHVYSIASKGSKFKELVTHGD 82
Q + Y+ L LVR + + +EKK N+ +I G E
Sbjct: 555 QQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDE------ 608
Query: 83 ASTENDVLTNPISEETTTFPTGGFTPEIGK-KKHTESTPFWSIKPNNVSIVLHAEEPYIE 141
S +D+ I E+ TG P+ G+ + E P + + P + S +EE E
Sbjct: 609 TSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEE 668
Query: 142 NEEPEPE-PEPAAKQTEAPRMLP 163
EE +P+ +P E + +P
Sbjct: 669 EEEEQPQAAQPPTLPVEEKKKIP 691
>gi|239758038 PREDICTED: mucin 3A, cell surface associated, partial
[Homo sapiens]
Length = 909
Score = 33.5 bits (75), Expect = 0.29
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Query: 116 TESTPFWSIK-------PNNVSIVLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPVVTES 168
TE TPF I P ++I + P E +P E + T + P TE
Sbjct: 642 TEITPFSYISLPSTTPCPGTITITIVPASPTDPCVEMDPSTEATSPPTTPLTVFPFTTEM 701
Query: 169 STSPYVTSYKSPVTTLDKSTGIGISTESEDVPQLSGET 206
T P S ++ +TT ++ + +ES P S T
Sbjct: 702 VTCPTSISIQTTLTTYMDTSSMMPESESSISPNASSST 739
>gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens]
Length = 1486
Score = 33.5 bits (75), Expect = 0.29
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Query: 116 TESTPFWSIK-------PNNVSIVLHAEEPYIENEEPEPEPEPAAKQTEAPRMLPVVTES 168
TE TPF I P ++I + P E +P E + T + P TE
Sbjct: 916 TEITPFSYISLPSTTPCPGTITITIVPASPTDPCVEMDPSTEATSPPTTPLTVFPFTTEM 975
Query: 169 STSPYVTSYKSPVTTLDKSTGIGISTESEDVPQLSGET 206
T P S ++ +TT ++ + +ES P S T
Sbjct: 976 VTCPTSISIQTTLTTYMDTSSMMPESESSISPNASSST 1013
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 33.5 bits (75), Expect = 0.29
Identities = 47/205 (22%), Positives = 79/205 (38%), Gaps = 22/205 (10%)
Query: 22 SITVTPDEEQNLNHYIQVLENLVRSVPSGEPGREKKSNSPKHVYSIASKGSKFKELVTHG 81
++ + +EE+ L E L++ R++ +P + A G E
Sbjct: 2047 TMVTSTEEERKLLDADAAYEELMK--------RQQMQLTPGSSPTQAPIGEDMTESTMDF 2098
Query: 82 DASTENDVLTNPISEETTTFPTGGFTPEIGKKKHTESTPFWSIKPNNVSIVLHAEEPYIE 141
D + + ++ +S + T T T I K T+ I+ V+ + I
Sbjct: 2099 DRMPDASLTSSVLSGASLTDSTSSATLSIPDVKITQHFSTEEIEDEYVTDYTREIQEIIA 2158
Query: 142 NEE---PEPEPEPAAKQTEAPRMLPVVTESSTSPYVTSYKSPVTTLDKST-----GIGIS 193
+E EP +A P P +T S +S T SP+TTLD T + +
Sbjct: 2159 HESLILTYSEPSESATSVP-PSDTPSLTSSVSSVCTTDSSSPITTLDSITTVYTEPVDMI 2217
Query: 194 TESEDVPQLSGET-----AIEKPEE 213
T+ ED ++S T I+ PEE
Sbjct: 2218 TKFEDSEEISSSTYFPGSIIDYPEE 2242
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 33.5 bits (75), Expect = 0.29
Identities = 47/205 (22%), Positives = 79/205 (38%), Gaps = 22/205 (10%)
Query: 22 SITVTPDEEQNLNHYIQVLENLVRSVPSGEPGREKKSNSPKHVYSIASKGSKFKELVTHG 81
++ + +EE+ L E L++ R++ +P + A G E
Sbjct: 2047 TMVTSTEEERKLLDADAAYEELMK--------RQQMQLTPGSSPTQAPIGEDMTESTMDF 2098
Query: 82 DASTENDVLTNPISEETTTFPTGGFTPEIGKKKHTESTPFWSIKPNNVSIVLHAEEPYIE 141
D + + ++ +S + T T T I K T+ I+ V+ + I
Sbjct: 2099 DRMPDASLTSSVLSGASLTDSTSSATLSIPDVKITQHFSTEEIEDEYVTDYTREIQEIIA 2158
Query: 142 NEE---PEPEPEPAAKQTEAPRMLPVVTESSTSPYVTSYKSPVTTLDKST-----GIGIS 193
+E EP +A P P +T S +S T SP+TTLD T + +
Sbjct: 2159 HESLILTYSEPSESATSVP-PSDTPSLTSSVSSVCTTDSSSPITTLDSITTVYTEPVDMI 2217
Query: 194 TESEDVPQLSGET-----AIEKPEE 213
T+ ED ++S T I+ PEE
Sbjct: 2218 TKFEDSEEISSSTYFPGSIIDYPEE 2242
>gi|21264337 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
[Homo sapiens]
Length = 1544
Score = 33.1 bits (74), Expect = 0.38
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 12/86 (13%)
Query: 86 ENDVLTNPISEETTTFPTGGFTPEIGKKKHTE--STPFWSIKPNN-VSIVLHAEEPYI-- 140
E + L P+ EE G F PE+ + T +T W++KP N ++ ++P++
Sbjct: 1394 EQEELEEPVYEEPVYEEVGAF-PELIQDTSTSFSTTREWTVKPENPLTSQKSLDQPFLSK 1452
Query: 141 ------ENEEPEPEPEPAAKQTEAPR 160
E PEP P P +K + R
Sbjct: 1453 SSTLGQEERPPEPPPGPPSKSSPQAR 1478
>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
Length = 984
Score = 33.1 bits (74), Expect = 0.38
Identities = 53/208 (25%), Positives = 72/208 (34%), Gaps = 38/208 (18%)
Query: 2 KPLVLLVALLLWPSSVPAYPSITVTPDEEQNLNHYIQVLENLVRSVPSGEP------GRE 55
KP L+ L+ PS VPA + T P Q + S PS P G +
Sbjct: 391 KPPTTLLGLIPAPSMVPA--TDTKAPPTLQAET----ATKPQATSAPSPAPKQSFLFGTQ 444
Query: 56 KKSNSPKHVYSIASKGSKFKELVTHGDASTENDVLTNPISEETTTFPTGGFTPEIGKKKH 115
S S + +S FK + T P SE+ P G P +
Sbjct: 445 NTSPSSPAAPAASSAPPMFKPIFT-----------APPKSEKEGPTPPG---PSV----- 485
Query: 116 TESTPFWSIKPNNVSIVLHAEEPYIENEEPE---PEPEPAAKQTEAPRMLPVVTESSTSP 172
T + P S P S +P + P P P P KQT P P ++T+P
Sbjct: 486 TATAPSSSSLPTTTSTTAPTFQPVFSSMGPPASVPLPAPFFKQTTTPATAP----TTTAP 541
Query: 173 YVTSYKSPVTTLDKSTGIGISTESEDVP 200
T S + + T ST+S P
Sbjct: 542 LFTGLASATSAVAPITSASPSTDSASKP 569
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.127 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,408,963
Number of Sequences: 37866
Number of extensions: 708565
Number of successful extensions: 3239
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 2879
Number of HSP's gapped (non-prelim): 432
length of query: 350
length of database: 18,247,518
effective HSP length: 103
effective length of query: 247
effective length of database: 14,347,320
effective search space: 3543788040
effective search space used: 3543788040
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.