DKC1 13417

Name: DKC1	Sequence: fasta or formatted (509aa)		NCBI GI: 215599015
Description: dyskerin isoform 2		Referenced in: Nucleus and Nucleolus Small RNAs in RNA Processing tRNA Enzymes
Other entries for this name: alt prot [514aa] dyskerin isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 39 2 C cysteine 1.6 8 1 D aspartate 4.9 25 1 E glutamate 8.3 42 2 F phenylalanine 1.0 5 1 G glycine 6.1 31 2 H histidine 2.6 13 1 I isoleucine 6.1 31 2 K lysine 12.2 62 8 L leucine 9.0 46 3 M methionine 2.4 12 1 N asparagine 1.8 9 1 P proline 4.5 23 2 Q glutamine 3.1 16 2 R arginine 5.9 30 2 S serine 5.7 29 2 T threonine 5.9 30 2 V valine 7.9 40 2 W tryptophan 1.2 6 1 Y tyrosine 2.4 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 dyskerin isoform 2 DKC1 0.993 dyskerin isoform 1 TRUB1 0.043 TruB pseudouridine (psi) synthase homolog 1 NOP58 0.020 NOP58 ribonucleoprotein homolog MAP1A 0.019 microtubule-associated protein 1A TCOF1 0.019 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.019 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.019 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.019 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.019 Treacher Collins-Franceschetti syndrome 1 isoform a ... CHD2 0.018 chromodomain helicase DNA binding protein 2 isoform... CYLC1 0.017 cylicin, basic protein of sperm head cytoskeleton 1... CYLC2 0.017 cylicin 2 MAP1B 0.017 microtubule-associated protein 1B DEK 0.016 DEK oncogene isoform 2 DEK 0.016 DEK oncogene isoform 1 METAP2 0.015 methionyl aminopeptidase 2 LOC100294088 0.014 PREDICTED: hypothetical protein, partial DDX21 0.014 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 FAM9A 0.014 family with sequence similarity 9, member A NKAP 0.014 NFKB activating protein LOC100133698 0.014 PREDICTED: hypothetical protein ADD2 0.014 adducin 2 isoform c ADD2 0.014 adducin 2 isoform a LARP7 0.014 La ribonucleoprotein domain family, member 7 LARP7 0.014 La ribonucleoprotein domain family, member 7 THOC2 0.014 THO complex 2 DNMT1 0.013 DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho... DNMT1 0.013 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo... LOC100128588 0.013 PREDICTED: similar to hCG34808 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.