BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|21553317 SFT2 domain containing 1 [Homo sapiens] (159 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|21553317 SFT2 domain containing 1 [Homo sapiens] 324 2e-89 gi|40786408 SFT2 domain containing 2 [Homo sapiens] 213 6e-56 gi|33413418 signal peptide peptidase 3 [Homo sapiens] 33 0.079 gi|13994190 frizzled 8 [Homo sapiens] 32 0.18 gi|27894385 frizzled 5 precursor [Homo sapiens] 31 0.39 gi|31542731 major facilitator superfamily domain containing 7 [H... 31 0.39 gi|30039714 otopetrin 2 [Homo sapiens] 28 3.3 gi|225637544 olfactory receptor, family 56, subfamily A, member ... 28 4.3 gi|169202671 PREDICTED: olfactory receptor, family 56, subfamily... 28 4.3 gi|89034551 PREDICTED: olfactory receptor, family 56, subfamily ... 28 4.3 gi|239744276 PREDICTED: olfactory receptor, family 56, subfamily... 28 4.3 gi|62526033 ATP-binding cassette, sub-family G, member 2 [Homo s... 27 5.6 gi|31317278 WD repeat domain 20 isoform 3 [Homo sapiens] 27 5.6 gi|31317276 WD repeat domain 20 isoform 4 [Homo sapiens] 27 5.6 gi|31317274 WD repeat domain 20 isoform 1 [Homo sapiens] 27 5.6 gi|31317280 WD repeat domain 20 isoform 2 [Homo sapiens] 27 5.6 gi|53933287 olfactory receptor, family 5, subfamily K, member 4 ... 27 5.6 gi|5454070 solute carrier family 9 (sodium/hydrogen exchanger), ... 27 7.4 gi|110227626 solute carrier family 9 (sodium/hydrogen exchanger)... 27 7.4 gi|115270955 olfactory receptor, family 5, subfamily K, member 1... 27 7.4 gi|47679099 Kazal type serine protease inhibitor 5-like 2 [Homo ... 27 7.4 gi|53933278 olfactory receptor, family 5, subfamily K, member 3 ... 27 9.6 >gi|21553317 SFT2 domain containing 1 [Homo sapiens] Length = 159 Score = 324 bits (831), Expect = 2e-89 Identities = 159/159 (100%), Positives = 159/159 (100%) Query: 1 MEKLRRVLSGQDDEEQGLTAQVLDASSLSFNTRLKWFAICFVCGVFFSILGTGLLWLPGG 60 MEKLRRVLSGQDDEEQGLTAQVLDASSLSFNTRLKWFAICFVCGVFFSILGTGLLWLPGG Sbjct: 1 MEKLRRVLSGQDDEEQGLTAQVLDASSLSFNTRLKWFAICFVCGVFFSILGTGLLWLPGG 60 Query: 61 IKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFEATRLLATIVMLLCFIFTLCAALWWHK 120 IKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFEATRLLATIVMLLCFIFTLCAALWWHK Sbjct: 61 IKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFEATRLLATIVMLLCFIFTLCAALWWHK 120 Query: 121 KGLAVLFCILQFLSMTWYSLSYIPYARDAVIKCCSSLLS 159 KGLAVLFCILQFLSMTWYSLSYIPYARDAVIKCCSSLLS Sbjct: 121 KGLAVLFCILQFLSMTWYSLSYIPYARDAVIKCCSSLLS 159 >gi|40786408 SFT2 domain containing 2 [Homo sapiens] Length = 160 Score = 213 bits (542), Expect = 6e-56 Identities = 100/160 (62%), Positives = 132/160 (82%), Gaps = 1/160 (0%) Query: 1 MEKLRRVLSGQDDEEQGLTAQVLDASSLSFNTRLKWFAICFVCGVFFSILGTGLLWLPG- 59 M+KL++VLSGQD E++ ++V++ASSLS++TR+K F CF G+ S+LGT LLW+P Sbjct: 1 MDKLKKVLSGQDTEDRSGLSEVVEASSLSWSTRIKGFIACFAIGILCSLLGTVLLWVPRK 60 Query: 60 GIKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFEATRLLATIVMLLCFIFTLCAALWWH 119 G+ LFAVFYT GN+A++ ST FLMGPVKQLK+MFE TRL+ATI++LLCF TLC+A WWH Sbjct: 61 GLHLFAVFYTFGNIASIGSTIFLMGPVKQLKRMFEPTRLIATIMVLLCFALTLCSAFWWH 120 Query: 120 KKGLAVLFCILQFLSMTWYSLSYIPYARDAVIKCCSSLLS 159 KGLA++FCILQ L++TWYSLS+IP+ARDAV KC + L+ Sbjct: 121 NKGLALIFCILQSLALTWYSLSFIPFARDAVKKCFAVCLA 160 >gi|33413418 signal peptide peptidase 3 [Homo sapiens] Length = 384 Score = 33.5 bits (75), Expect = 0.079 Identities = 22/100 (22%), Positives = 42/100 (42%) Query: 44 GVFFSILGTGLLWLPGGIKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFEATRLLATIV 103 G FS+LG G + +PG + F + Y A +C GP +M + + T++ Sbjct: 261 GSHFSMLGIGDIVMPGLLLCFVLRYDNYKKQASGDSCGAPGPANISGRMQKVSYFHCTLI 320 Query: 104 MLLCFIFTLCAALWWHKKGLAVLFCILQFLSMTWYSLSYI 143 + T A H+ L ++ F + +++Y+ Sbjct: 321 GYFVGLLTATVASRIHRAAQPALLYLVPFTLLPLLTMAYL 360 >gi|13994190 frizzled 8 [Homo sapiens] Length = 694 Score = 32.3 bits (72), Expect = 0.18 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 12/68 (17%) Query: 83 MGPVKQLKKMFEATRLLATIVMLLCFIFTLCAALWWHKKGLAVLFCILQFLSMTWYSLSY 142 +G V+Q + L T+V LL + F + +++WW LS+TW+ + Sbjct: 379 LGAVEQHVRYETTGPALCTVVFLLVYFFGMASSIWW------------VILSLTWFLAAG 426 Query: 143 IPYARDAV 150 + + +A+ Sbjct: 427 MKWGNEAI 434 >gi|27894385 frizzled 5 precursor [Homo sapiens] Length = 585 Score = 31.2 bits (69), Expect = 0.39 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 12/52 (23%) Query: 99 LATIVMLLCFIFTLCAALWWHKKGLAVLFCILQFLSMTWYSLSYIPYARDAV 150 L TIV LL + F + +++WW LS+TW+ + + + +A+ Sbjct: 314 LCTIVFLLVYFFGMASSIWW------------VILSLTWFLAAGMKWGNEAI 353 >gi|31542731 major facilitator superfamily domain containing 7 [Homo sapiens] Length = 559 Score = 31.2 bits (69), Expect = 0.39 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 11/90 (12%) Query: 65 AVFYTLGNLAALASTCFLMGP-VKQLKKMFEATRLLATIVMLLCFIFTLCAALWWHKKGL 123 A+F T G L ALA +GP V + K EAT++ + L C F L + L L Sbjct: 288 ALFITFGILGALA-----LGPYVDRTKHFTEATKIGLCLFSLACVPFALVSQLQGQTLAL 342 Query: 124 AVLFCILQFLSMTWYSLSYIPYARDAVIKC 153 A +L + S P A + ++C Sbjct: 343 AATCSLLGL-----FGFSVGPVAMELAVEC 367 >gi|30039714 otopetrin 2 [Homo sapiens] Length = 562 Score = 28.1 bits (61), Expect = 3.3 Identities = 23/100 (23%), Positives = 37/100 (37%), Gaps = 13/100 (13%) Query: 43 CGVFFSILGTGLLWLPGGIKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFEATRLLATI 102 C V + G +WL GG+ LF + L F G + A ++L + Sbjct: 89 CAVPYRDAHAGPIWLRGGLVLFGI-------CTLIMDVFKTGYYSSFFECQSAIKILHPL 141 Query: 103 VMLLCFIFTLCAALWWHKKGLAVLFCILQFLSMTWYSLSY 142 + + F+ LW K C+ L +TW L + Sbjct: 142 IQAV-FVIIQTYFLWVSAKD-----CVHVHLDLTWCGLMF 175 >gi|225637544 olfactory receptor, family 56, subfamily A, member 5 [Homo sapiens] Length = 313 Score = 27.7 bits (60), Expect = 4.3 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 5/106 (4%) Query: 56 WLPGGIKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFEATRLLATIVMLLCFIFTLCAA 115 WL + L + +G A L T +L + Q + L IV+ L I + A Sbjct: 29 WLSLPLSLLFLL-AMGANATLLITIYLEASLHQPLYYLLSLLSLLDIVLCLTVIPKVLAI 87 Query: 116 LWWHKKGLAVLFCILQFLSM----TWYSLSYIPYARDAVIKCCSSL 157 W+ + ++ C LQ M T S +++ A D + C L Sbjct: 88 FWFDLRSISFPACFLQVFIMNSFLTMESCTFMIMAYDRYVAICKPL 133 >gi|169202671 PREDICTED: olfactory receptor, family 56, subfamily A, member 5 [Homo sapiens] Length = 313 Score = 27.7 bits (60), Expect = 4.3 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 5/106 (4%) Query: 56 WLPGGIKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFEATRLLATIVMLLCFIFTLCAA 115 WL + L + +G A L T +L + Q + L IV+ L I + A Sbjct: 29 WLSLPLSLLFLL-AMGANATLLITIYLEASLHQPLYYLLSLLSLLDIVLCLTVIPKVLAI 87 Query: 116 LWWHKKGLAVLFCILQFLSM----TWYSLSYIPYARDAVIKCCSSL 157 W+ + ++ C LQ M T S +++ A D + C L Sbjct: 88 FWFDLRSISFPACFLQVFIMNSFLTMESCTFMIMAYDRYVAICKPL 133 >gi|89034551 PREDICTED: olfactory receptor, family 56, subfamily A, member 5 [Homo sapiens] Length = 313 Score = 27.7 bits (60), Expect = 4.3 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 5/106 (4%) Query: 56 WLPGGIKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFEATRLLATIVMLLCFIFTLCAA 115 WL + L + +G A L T +L + Q + L IV+ L I + A Sbjct: 29 WLSLPLSLLFLL-AMGANATLLITIYLEASLHQPLYYLLSLLSLLDIVLCLTVIPKVLAI 87 Query: 116 LWWHKKGLAVLFCILQFLSM----TWYSLSYIPYARDAVIKCCSSL 157 W+ + ++ C LQ M T S +++ A D + C L Sbjct: 88 FWFDLRSISFPACFLQVFIMNSFLTMESCTFMIMAYDRYVAICKPL 133 >gi|239744276 PREDICTED: olfactory receptor, family 56, subfamily A, member 5 [Homo sapiens] Length = 313 Score = 27.7 bits (60), Expect = 4.3 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 5/106 (4%) Query: 56 WLPGGIKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFEATRLLATIVMLLCFIFTLCAA 115 WL + L + +G A L T +L + Q + L IV+ L I + A Sbjct: 29 WLSLPLSLLFLL-AMGANATLLITIYLEASLHQPLYYLLSLLSLLDIVLCLTVIPKVLAI 87 Query: 116 LWWHKKGLAVLFCILQFLSM----TWYSLSYIPYARDAVIKCCSSL 157 W+ + ++ C LQ M T S +++ A D + C L Sbjct: 88 FWFDLRSISFPACFLQVFIMNSFLTMESCTFMIMAYDRYVAICKPL 133 >gi|62526033 ATP-binding cassette, sub-family G, member 2 [Homo sapiens] Length = 655 Score = 27.3 bits (59), Expect = 5.6 Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 12/109 (11%) Query: 38 AICFVCGVFFSILGTGLLWLPGGIKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFEATR 97 +I F C V+F + GL P F + +TL +A AS+ L Q + Sbjct: 486 SIIFTCIVYFML---GLK--PKADAFFVMMFTLMMVAYSASSMALAIAAGQ------SVV 534 Query: 98 LLATIVMLLCFIFTLC-AALWWHKKGLAVLFCILQFLSMTWYSLSYIPY 145 +AT++M +CF+F + + L + +A LQ+ S+ Y + + + Sbjct: 535 SVATLLMTICFVFMMIFSGLLVNLTTIASWLSWLQYFSIPRYGFTALQH 583 >gi|31317278 WD repeat domain 20 isoform 3 [Homo sapiens] Length = 508 Score = 27.3 bits (59), Expect = 5.6 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 52 TGLLWLPGGIKLFAVFYTLGN--LAALASTCFLMGPVKQLKKMFEA 95 T + W+PG LF V ++ GN L + TC P QL K E+ Sbjct: 92 TCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGES 137 >gi|31317276 WD repeat domain 20 isoform 4 [Homo sapiens] Length = 445 Score = 27.3 bits (59), Expect = 5.6 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 52 TGLLWLPGGIKLFAVFYTLGN--LAALASTCFLMGPVKQLKKMFEA 95 T + W+PG LF V ++ GN L + TC P QL K E+ Sbjct: 29 TCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGES 74 >gi|31317274 WD repeat domain 20 isoform 1 [Homo sapiens] Length = 581 Score = 27.3 bits (59), Expect = 5.6 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 52 TGLLWLPGGIKLFAVFYTLGN--LAALASTCFLMGPVKQLKKMFEA 95 T + W+PG LF V ++ GN L + TC P QL K E+ Sbjct: 153 TCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGES 198 >gi|31317280 WD repeat domain 20 isoform 2 [Homo sapiens] Length = 569 Score = 27.3 bits (59), Expect = 5.6 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 52 TGLLWLPGGIKLFAVFYTLGN--LAALASTCFLMGPVKQLKKMFEA 95 T + W+PG LF V ++ GN L + TC P QL K E+ Sbjct: 153 TCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGES 198 >gi|53933287 olfactory receptor, family 5, subfamily K, member 4 [Homo sapiens] Length = 321 Score = 27.3 bits (59), Expect = 5.6 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 63 LFAVFYTLGNLAALASTCFLMGPVKQLKKMFEATRLLATIVMLLCFIFTLCAA 115 L ++ LGNLA + S C K L+ F R+++ + F F LC A Sbjct: 56 LTPMYIFLGNLALMDSCCSCAVTPKMLENFFSEDRIISLYECMAQFYF-LCLA 107 >gi|5454070 solute carrier family 9 (sodium/hydrogen exchanger), member 6 isoform b [Homo sapiens] Length = 669 Score = 26.9 bits (58), Expect = 7.4 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 8/85 (9%) Query: 65 AVFYTLGNLAALASTCFLMGP--------VKQLKKMFEATRLLATIVMLLCFIFTLCAAL 116 A+F ++G + S F MG V + K+ E L + L+ + L A Sbjct: 287 AMFKSIGIFLGIFSGSFAMGAATGVVTALVTKFTKLREFQLLETGLFFLMSWSTFLLAEA 346 Query: 117 WWHKKGLAVLFCILQFLSMTWYSLS 141 W +AVLFC + T+ +LS Sbjct: 347 WGFTGVVAVLFCGITQAHYTYNNLS 371 >gi|110227626 solute carrier family 9 (sodium/hydrogen exchanger), member 6 isoform a [Homo sapiens] Length = 701 Score = 26.9 bits (58), Expect = 7.4 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 8/85 (9%) Query: 65 AVFYTLGNLAALASTCFLMGP--------VKQLKKMFEATRLLATIVMLLCFIFTLCAAL 116 A+F ++G + S F MG V + K+ E L + L+ + L A Sbjct: 319 AMFKSIGIFLGIFSGSFAMGAATGVVTALVTKFTKLREFQLLETGLFFLMSWSTFLLAEA 378 Query: 117 WWHKKGLAVLFCILQFLSMTWYSLS 141 W +AVLFC + T+ +LS Sbjct: 379 WGFTGVVAVLFCGITQAHYTYNNLS 403 >gi|115270955 olfactory receptor, family 5, subfamily K, member 1 [Homo sapiens] Length = 308 Score = 26.9 bits (58), Expect = 7.4 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 15/80 (18%) Query: 45 VFFSILGTGLLWLPGGIKLFAVFYT-----------LGNLAALASTCFLMGPVKQLKKMF 93 VFF+I L+ + G I L A+ +T LGNLA + S C K L+ F Sbjct: 30 VFFAIY---LITVVGNISLVALIFTHRRLHTPMYIFLGNLALVDSCCACAITPKMLENFF 86 Query: 94 EATRLLATIVMLLCFIFTLC 113 + ++ + F F LC Sbjct: 87 SENKRISLYECAVQFYF-LC 105 >gi|47679099 Kazal type serine protease inhibitor 5-like 2 [Homo sapiens] Length = 97 Score = 26.9 bits (58), Expect = 7.4 Identities = 12/51 (23%), Positives = 25/51 (49%) Query: 89 LKKMFEATRLLATIVMLLCFIFTLCAALWWHKKGLAVLFCILQFLSMTWYS 139 + K F LL+ I++ L WW +G+ + C + ++++WY+ Sbjct: 1 MAKSFPVFSLLSFILIHLVLSSVSGPRHWWPPRGIIKVKCPYEKVNLSWYN 51 >gi|53933278 olfactory receptor, family 5, subfamily K, member 3 [Homo sapiens] Length = 321 Score = 26.6 bits (57), Expect = 9.6 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 20/113 (17%) Query: 14 EEQGLTAQVLDASSLSFNTRLKWFAICFVCGVFFSILGTGLLWLPGGIKLFAVFYT---- 69 E L A+ + + +++ +LK + FV VFF+I L+ + G I L A+ Y Sbjct: 4 ENHSLIAEFI-LTGFTYHPKLK--TVLFV--VFFAIY---LITMVGNIGLVALIYIEQRL 55 Query: 70 -------LGNLAALASTCFLMGPVKQLKKMFEATRLLATIVMLLCFIFTLCAA 115 LGNL + S C K L+ F + + + F F LC A Sbjct: 56 HTPMYIFLGNLVLMDSCCSSAITPKMLENFFSEDKRITLYECMAQFYF-LCLA 107 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.332 0.142 0.464 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,371,199 Number of Sequences: 37866 Number of extensions: 191778 Number of successful extensions: 640 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 632 Number of HSP's gapped (non-prelim): 23 length of query: 159 length of database: 18,247,518 effective HSP length: 94 effective length of query: 65 effective length of database: 14,688,114 effective search space: 954727410 effective search space used: 954727410 T: 11 A: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (22.0 bits) S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.