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Search of human proteins with 21389535
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21389535 T-complex 10A-2 [Homo sapiens]
(215 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21389535 T-complex 10A-2 [Homo sapiens] 437 e-123
gi|223468602 t-complex 10-like 2 [Homo sapiens] 333 9e-92
gi|105553088 t-complex 10 [Homo sapiens] 278 3e-75
gi|130980075 centromere protein J [Homo sapiens] 57 1e-08
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 41 9e-04
gi|27597090 suppressor of Ty 6 homolog [Homo sapiens] 37 0.013
gi|89886201 hypothetical protein LOC642938 [Homo sapiens] 37 0.017
gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo s... 35 0.037
gi|38569411 AP1 gamma subunit binding protein 1 isoform 2 [Homo ... 34 0.11
gi|38569409 AP1 gamma subunit binding protein 1 isoform 1 [Homo ... 34 0.11
gi|29893555 angiopoietin-like 6 [Homo sapiens] 33 0.14
gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo s... 33 0.14
gi|21735548 centrosomal protein 2 [Homo sapiens] 33 0.18
gi|5803145 ralA binding protein 1 [Homo sapiens] 33 0.24
gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens] 32 0.31
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 32 0.41
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 32 0.41
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 32 0.41
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 32 0.41
gi|122937207 coiled-coil domain containing 61 [Homo sapiens] 32 0.41
gi|224282174 DH and coiled-coil domain-containing protein [Homo ... 32 0.53
gi|208431757 KLRAQ motif containing 1 isoform 3 [Homo sapiens] 32 0.53
gi|24308420 KLRAQ motif containing 1 isoform 2 [Homo sapiens] 32 0.53
gi|208431754 KLRAQ motif containing 1 isoform 1 [Homo sapiens] 32 0.53
gi|241982802 HMG box domain containing 3 [Homo sapiens] 31 0.70
gi|150170670 piccolo isoform 2 [Homo sapiens] 31 0.70
gi|150378539 piccolo isoform 1 [Homo sapiens] 31 0.70
gi|153792230 hypothetical protein LOC57670 [Homo sapiens] 31 0.91
gi|16554562 caspase recruitment domain protein 9 isoform 2 [Homo... 31 0.91
gi|47717131 caspase recruitment domain protein 9 isoform 1 [Homo... 31 0.91
>gi|21389535 T-complex 10A-2 [Homo sapiens]
Length = 215
Score = 437 bits (1124), Expect = e-123
Identities = 215/215 (100%), Positives = 215/215 (100%)
Query: 1 MLAGQLEARDPKEGTHPEDPCPGAGAVMEKTAVAAEVLTEDCNTGEMPPLQQQIIRLHQE 60
MLAGQLEARDPKEGTHPEDPCPGAGAVMEKTAVAAEVLTEDCNTGEMPPLQQQIIRLHQE
Sbjct: 1 MLAGQLEARDPKEGTHPEDPCPGAGAVMEKTAVAAEVLTEDCNTGEMPPLQQQIIRLHQE 60
Query: 61 LGRQKSLWADVHGKLRSHIDALREQNMELREKLRALQLQRWKARKKSAASPHAGQESHTL 120
LGRQKSLWADVHGKLRSHIDALREQNMELREKLRALQLQRWKARKKSAASPHAGQESHTL
Sbjct: 61 LGRQKSLWADVHGKLRSHIDALREQNMELREKLRALQLQRWKARKKSAASPHAGQESHTL 120
Query: 121 ALEPAFGKISPLSADEETIPKYAGHKNQSATLLGQRSSSNNSAPPKPMSLKIERISSWKT 180
ALEPAFGKISPLSADEETIPKYAGHKNQSATLLGQRSSSNNSAPPKPMSLKIERISSWKT
Sbjct: 121 ALEPAFGKISPLSADEETIPKYAGHKNQSATLLGQRSSSNNSAPPKPMSLKIERISSWKT 180
Query: 181 PPQENRDKNLSRRRQDRRATPTGRPTPCAERRGGV 215
PPQENRDKNLSRRRQDRRATPTGRPTPCAERRGGV
Sbjct: 181 PPQENRDKNLSRRRQDRRATPTGRPTPCAERRGGV 215
>gi|223468602 t-complex 10-like 2 [Homo sapiens]
Length = 353
Score = 333 bits (853), Expect = 9e-92
Identities = 166/212 (78%), Positives = 182/212 (85%)
Query: 1 MLAGQLEARDPKEGTHPEDPCPGAGAVMEKTAVAAEVLTEDCNTGEMPPLQQQIIRLHQE 60
ML GQLEAR+PKEGTHPEDPCPGAGA MEKT AAEV ED N GEMP LQQQI LHQE
Sbjct: 1 MLEGQLEAREPKEGTHPEDPCPGAGAAMEKTPAAAEVPREDSNAGEMPSLQQQITSLHQE 60
Query: 61 LGRQKSLWADVHGKLRSHIDALREQNMELREKLRALQLQRWKARKKSAASPHAGQESHTL 120
LGRQ+SLWAD+H KL+SH+DALR+QN ELRE+LR LQ Q+W+A KK AASPHAG+ESHTL
Sbjct: 61 LGRQQSLWADIHRKLQSHMDALRKQNRELREELRGLQRQQWEAGKKPAASPHAGRESHTL 120
Query: 121 ALEPAFGKISPLSADEETIPKYAGHKNQSATLLGQRSSSNNSAPPKPMSLKIERISSWKT 180
ALEPAFGKISPLSADEET PKYAG K+QSATLLGQR SSN+ APPKPMSLK ERI+S KT
Sbjct: 121 ALEPAFGKISPLSADEETTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGKT 180
Query: 181 PPQENRDKNLSRRRQDRRATPTGRPTPCAERR 212
PPQE+R+K+ RRQDR PTGRPTP AERR
Sbjct: 181 PPQEDREKSPPGRRQDRSPAPTGRPTPGAERR 212
>gi|105553088 t-complex 10 [Homo sapiens]
Length = 326
Score = 278 bits (711), Expect = 3e-75
Identities = 141/186 (75%), Positives = 157/186 (84%)
Query: 28 MEKTAVAAEVLTEDCNTGEMPPLQQQIIRLHQELGRQKSLWADVHGKLRSHIDALREQNM 87
MEKT AAEV ED N GEMP LQQQI LHQELGRQ+SLWAD+H KL+SH+DALR+QN
Sbjct: 1 MEKTPAAAEVPREDSNAGEMPSLQQQITSLHQELGRQQSLWADIHRKLQSHMDALRKQNR 60
Query: 88 ELREKLRALQLQRWKARKKSAASPHAGQESHTLALEPAFGKISPLSADEETIPKYAGHKN 147
ELRE+LR LQ Q+W+A KK AASPHAG+ESHTLALEPAFGKIS LSADE+T PKYAG K+
Sbjct: 61 ELREELRGLQRQQWEAGKKPAASPHAGRESHTLALEPAFGKISHLSADEDTTPKYAGRKS 120
Query: 148 QSATLLGQRSSSNNSAPPKPMSLKIERISSWKTPPQENRDKNLSRRRQDRRATPTGRPTP 207
QSATLLGQR SSN+ APPKPMSLK ERI+S KTPPQE+R+K+ RRQDR PTGRPTP
Sbjct: 121 QSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQEDREKSPPGRRQDRSPAPTGRPTP 180
Query: 208 CAERRG 213
AERRG
Sbjct: 181 GAERRG 186
>gi|130980075 centromere protein J [Homo sapiens]
Length = 1338
Score = 57.0 bits (136), Expect = 1e-08
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 27 VMEKTAVAAEVLTEDCNTGEMPPLQQQIIRLHQELGRQKSLWADVHGKLRSHIDALREQN 86
V EK AA + E+ L+QQI L ++L R+++ W+ H +LRS I L +N
Sbjct: 976 VFEKYTTAARTFPDKKEREEIQTLKQQIADLREDLKRKETKWSSTHSRLRSQIQMLVREN 1035
Query: 87 MELREKLRALQ---LQRWKARKKSAASPHAGQESHTLALEPAFGKISPLSADEETIPKYA 143
+LRE+++ ++ L WK R ++ S ++ LA + S +S+ + + KY
Sbjct: 1036 TDLREEIKVMERFRLDAWK-RAEAIESSLEVEKKDKLANTSVRFQNSQISSGTQ-VEKY- 1092
Query: 144 GHKNQSATLLGQRSSSNNSAPPKPM 168
K + G + SAPP+ +
Sbjct: 1093 --KKNYLPMQGNPPRRSKSAPPRDL 1115
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 40.8 bits (94), Expect = 9e-04
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 18/181 (9%)
Query: 46 EMPPLQQQIIRLHQELGRQKSLWADVHGKL-----RSHIDALREQNMELREKLRALQLQR 100
E LQ Q+ L +L +++ A H KL ++H DA ++QN EL+E+LR+L+ +
Sbjct: 1585 EAQRLQAQLNELQAQLSQKEQ--AAEHYKLQMEKAKTHYDAKKQQNQELQEQLRSLEQLQ 1642
Query: 101 WKARKKSAASPHAGQESHTLAL--EPAFGKISPLSADEETIPKYAGHKNQSATLLGQ--- 155
+ ++ A + G E L + A L+A ++ H +Q LG+
Sbjct: 1643 KENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQVAHADQQLRDLGKFQV 1702
Query: 156 -----RSSSNNSAPPKPMSLKIERISSWKTPPQENRDKNLSRRRQDRRATPTGRPTPCAE 210
+S + P +S+ +S + P K L R + D + P +P ++
Sbjct: 1703 ATDALKSREPQAKPQLDLSIDSLDLSCEEGTPLSITSK-LPRTQPDGTSVPGEPASPISQ 1761
Query: 211 R 211
R
Sbjct: 1762 R 1762
>gi|27597090 suppressor of Ty 6 homolog [Homo sapiens]
Length = 1726
Score = 37.0 bits (84), Expect = 0.013
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 113 AGQESHTLALEPAFGKISPLSADEETIPKY----AGHKNQSATLLGQRSSSNNSAPPKPM 168
A Q T + P++ +P + T P+Y A QSA Q SSS+ +P
Sbjct: 1608 AQQPVATPLMTPSYSYTTP--SQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPK 1665
Query: 169 SLKIERISSWKTPPQENRDKNLSRRRQDRRATPTGRPTPCAE 210
S I K Q ++K RR+Q +R TP P+P E
Sbjct: 1666 SNSHAAIDWGKMAEQWLQEKEAERRKQKQRLTPRPSPSPMIE 1707
>gi|89886201 hypothetical protein LOC642938 [Homo sapiens]
Length = 479
Score = 36.6 bits (83), Expect = 0.017
Identities = 40/141 (28%), Positives = 55/141 (39%), Gaps = 19/141 (13%)
Query: 88 ELREKLRALQLQRWKARKKS--AASPHAGQESHTLALEPAFGKISPLSADEETIPKYAG- 144
+L++ + L R K KS AA P Q + L + P+ EE P AG
Sbjct: 110 DLKKCYQTFPLDRKKGNLKSLPAADPFKSQNNGFLTDAKEKNEAGPM---EEARPCGAGR 166
Query: 145 ---------HKNQSATLLGQRSSSNNSAP---PKPMSLKIERISSWKTPPQENRDKNL-S 191
H NQ + Q N + P P+P+S + + PP E D L
Sbjct: 167 VHKTTALVFHSNQHMNTVDQPLGVNCTEPCKSPEPLSYGEAALQNSTRPPSEEPDYQLLG 226
Query: 192 RRRQDRRATPTGRPTPCAERR 212
R +QDR + P P A RR
Sbjct: 227 RAKQDRGRPNSEEPAPPALRR 247
>gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo
sapiens]
Length = 731
Score = 35.4 bits (80), Expect = 0.037
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 14/149 (9%)
Query: 46 EMPPLQQQIIRLHQELGRQ-----KSLWADVHGKLRSHIDALREQNMELREKLRALQLQR 100
++ LQQ+ +LHQE + +SL + G L+ +D LRE+N LR++ R + Q+
Sbjct: 332 QLESLQQEACKLHQEKEMEVYRVTESLQREKAGLLKQ-LDFLRERNKHLRDE-RDICFQK 389
Query: 101 WKARKKSAASPHAGQESHTLALEPAF----GKISPLSADEET---IPKYAGHKNQSATLL 153
KA K + A+ A + + ++ + G + S +EE IP+ + L
Sbjct: 390 NKAAKANTAASRASWKKRSGSVIGKYVDSRGILRSQSEEEEEVFGIPRRSSLGLSGYPLT 449
Query: 154 GQRSSSNNSAPPKPMSLKIERISSWKTPP 182
+ + P P + RI S + P
Sbjct: 450 EEEPGTGEPGPGGPYPRPLRRIISVEEDP 478
>gi|38569411 AP1 gamma subunit binding protein 1 isoform 2 [Homo
sapiens]
Length = 1302
Score = 33.9 bits (76), Expect = 0.11
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 83 REQNMELREKLRALQLQRWKARKKSAASPHAGQESHTLALEPAFGKISPLSADEETIPKY 142
+++ +E K R + Q+ K R S+ P G++S ALE G + S D + P
Sbjct: 130 QQKLLEEERKRRQFEEQKQKLRLLSSVKPKTGEKSRDDALEAIKGNLDGFSRDAKMHPTP 189
Query: 143 AGHKNQSATLLGQR 156
A H + L ++
Sbjct: 190 ASHPKKPGPSLEEK 203
>gi|38569409 AP1 gamma subunit binding protein 1 isoform 1 [Homo
sapiens]
Length = 1314
Score = 33.9 bits (76), Expect = 0.11
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 83 REQNMELREKLRALQLQRWKARKKSAASPHAGQESHTLALEPAFGKISPLSADEETIPKY 142
+++ +E K R + Q+ K R S+ P G++S ALE G + S D + P
Sbjct: 130 QQKLLEEERKRRQFEEQKQKLRLLSSVKPKTGEKSRDDALEAIKGNLDGFSRDAKMHPTP 189
Query: 143 AGHKNQSATLLGQR 156
A H + L ++
Sbjct: 190 ASHPKKPGPSLEEK 203
>gi|29893555 angiopoietin-like 6 [Homo sapiens]
Length = 470
Score = 33.5 bits (75), Expect = 0.14
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 25 GAVMEKTAVAAEVLTEDCNTGEMPPLQQQIIRLHQELGRQKSLWADVHGKLRSHIDALRE 84
GAV + E N E+ L+ ++ R H+EL R+ A G + + ALR+
Sbjct: 40 GAVCWSGPASTRATPEAANASELAALRMRVGR-HEELLRELQRLAAADGAVAGEVRALRK 98
Query: 85 QNMELREKLRALQLQRWKARKKSAASPHAGQESHTLALEPA 125
++ L +L L +A+ + A P AG + L EPA
Sbjct: 99 ESRGLSARLGQL-----RAQLQHEAGPGAGPGA-DLGAEPA 133
>gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo
sapiens]
Length = 462
Score = 33.5 bits (75), Expect = 0.14
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 46 EMPPLQQQIIRLHQELGRQ-----KSLWADVHGKLRSHIDALREQNMELREKLRALQLQR 100
++ LQQ+ +LHQE + +SL + G L+ +D LRE+N LR++ R + Q+
Sbjct: 332 QLESLQQEACKLHQEKEMEVYRVTESLQREKAGLLKQ-LDFLRERNKHLRDE-RDICFQK 389
Query: 101 WKARKKSAASPHA 113
KA K + A+ A
Sbjct: 390 NKAAKANTAASRA 402
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 33.1 bits (74), Expect = 0.18
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 46 EMPPLQQQIIRLHQELGRQKSLWADVHGKLRSHIDALREQNMELREKLRALQLQRWKAR 104
E P L + ++RL +E R +SL A+V+ +LR H++ N LRE + L + +AR
Sbjct: 92 EEPNLDELLVRLEEEQQRCESL-AEVNTQLRLHMEKADVVNKALREDVEKLTVDWSRAR 149
Score = 31.6 bits (70), Expect = 0.53
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 46 EMPPLQQQIIRLHQELGRQKSLWADVHGKLRSHIDALREQNMELREKLRALQLQRWKAR 104
E+ LQ+Q+ + +E KS W L S + L E L+ +LR +LQR +A+
Sbjct: 1286 ELQDLQRQLSQNQEE----KSKWEGKQNSLESELMELHETMASLQSRLRRAELQRMEAQ 1340
>gi|5803145 ralA binding protein 1 [Homo sapiens]
Length = 655
Score = 32.7 bits (73), Expect = 0.24
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 51 QQQIIRLHQELGRQKSLWADVHGKLRSHIDALREQNMELREKLRALQLQRWKARKKSAAS 110
++++ + ++L RQ + L I RE +ELR +LR LQ+QR KA +++
Sbjct: 549 EEELQIILEDLQRQNEELEIKNNHLNQAIHEEREAIIELRVQLRLLQMQRAKAEQQAQED 608
Query: 111 PH------AGQESHTLALEPAFGKISPLSADEETIPKYAGHKNQSA 150
A Q LEP K P + E P + + +++
Sbjct: 609 EEPEWRGGAVQPPRDGVLEPKAAKEQPKAGKEPAKPSPSRDRKETS 654
>gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]
Length = 1007
Score = 32.3 bits (72), Expect = 0.31
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 146 KNQSATLLGQRSSSNNSAPPKPMSLKIERISSWKTPPQENRDKNLSRRRQDRRATPTGRP 205
K+ S TL R + + S K + R+SS +T P RD LSRR + + A+P R
Sbjct: 380 KSPSRTLSPGRRAKSRSLERKRREPERRRLSSPRTRP---RDDILSRRERSKDASPINRW 436
Query: 206 TPCAER 211
+P R
Sbjct: 437 SPTRRR 442
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 32.0 bits (71), Expect = 0.41
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 51 QQQIIRLHQELGRQKSLWADVHGKLRSHIDALREQNMELREKLRALQLQRWKARKKSAAS 110
++ + +L + + K LW +V + R+ + + QN E ++L+ L+ + + +++ AAS
Sbjct: 1666 EEAVKQLRKMQAQMKELWREVE-ETRTSREEIFSQNRESEKRLKGLEAEVLRLQEELAAS 1724
Query: 111 P----HAGQESHTLALEPAFGKISPLSADEE 137
A Q+ +A E A G +S + EE
Sbjct: 1725 DRARRQAQQDRDEMADEVANGNLSKAAILEE 1755
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 32.0 bits (71), Expect = 0.41
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 51 QQQIIRLHQELGRQKSLWADVHGKLRSHIDALREQNMELREKLRALQLQRWKARKKSAAS 110
++ + +L + + K LW +V + R+ + + QN E ++L+ L+ + + +++ AAS
Sbjct: 1658 EEAVKQLRKMQAQMKELWREVE-ETRTSREEIFSQNRESEKRLKGLEAEVLRLQEELAAS 1716
Query: 111 P----HAGQESHTLALEPAFGKISPLSADEE 137
A Q+ +A E A G +S + EE
Sbjct: 1717 DRARRQAQQDRDEMADEVANGNLSKAAILEE 1747
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 32.0 bits (71), Expect = 0.41
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 51 QQQIIRLHQELGRQKSLWADVHGKLRSHIDALREQNMELREKLRALQLQRWKARKKSAAS 110
++ + +L + + K LW +V + R+ + + QN E ++L+ L+ + + +++ AAS
Sbjct: 1699 EEAVKQLRKMQAQMKELWREVE-ETRTSREEIFSQNRESEKRLKGLEAEVLRLQEELAAS 1757
Query: 111 P----HAGQESHTLALEPAFGKISPLSADEE 137
A Q+ +A E A G +S + EE
Sbjct: 1758 DRARRQAQQDRDEMADEVANGNLSKAAILEE 1788
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 32.0 bits (71), Expect = 0.41
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 35 AEVLTEDCNTGEMPPLQQQIIRLHQELGRQKSLWADVHGKLRSHIDALREQNMELREKLR 94
A +L ++ TGE+ L+QQII ++ K L A + + A RE LRE+
Sbjct: 936 ALLLAKETLTGELAGLRQQIIATQEKASLDKELMA------QKLVQAEREAQASLREQRA 989
Query: 95 ALQ--LQRWKARKKSA 108
A + LQR + K++A
Sbjct: 990 AHEEDLQRLQREKEAA 1005
Score = 30.0 bits (66), Expect = 1.5
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 51 QQQIIRLHQELGRQKSLWADVHGKLRSHIDALREQNMELREKLRAL--QLQRWKARKKSA 108
QQQ + L QE+ R +S A L + A R++ L E++ L QLQ+ R +
Sbjct: 1948 QQQQLELQQEVERLRSAQAQTERTLEARERAHRQRVRGLEEQVSTLKGQLQQELRRSSAP 2007
Query: 109 ASPHAG 114
SP +G
Sbjct: 2008 FSPPSG 2013
>gi|122937207 coiled-coil domain containing 61 [Homo sapiens]
Length = 531
Score = 32.0 bits (71), Expect = 0.41
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 48 PPLQQQIIR-LHQELGRQKSL-WADVHGKLRSHIDALREQNMELREKLRALQLQRWKARK 105
P + Q IIR L +ELGR + L + + I LREQ L + R L+ Q ++R+
Sbjct: 202 PVVLQGIIRSLKEELGRLQGLDGQNTRDTRENEIWHLREQVSRLASEKRELEAQLGRSRE 261
Query: 106 KSAASPHAGQESHTL 120
++ A A QE+ L
Sbjct: 262 EALAGRAARQEAEAL 276
>gi|224282174 DH and coiled-coil domain-containing protein [Homo
sapiens]
Length = 844
Score = 31.6 bits (70), Expect = 0.53
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 106 KSAASPHAGQESHTL-ALEPAFGKISPLSADEETIPKYAGHKNQSATLLGQRSSSNNSAP 164
KSA SP ++ L A A GK PLS + P+ + L RSSS AP
Sbjct: 678 KSATSPAGSSSAYKLEAAAQAHGKAKPLSRSLKEFPRAPPADGVAPRLYSTRSSSGGRAP 737
Query: 165 PK 166
K
Sbjct: 738 IK 739
>gi|208431757 KLRAQ motif containing 1 isoform 3 [Homo sapiens]
Length = 734
Score = 31.6 bits (70), Expect = 0.53
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Query: 2 LAGQLEARDPKEGTHPEDPCPGAGAVMEKTAVAAEVLTEDCNTGEMPPLQQQIIRLHQEL 61
L QL+ D K H C + + E LTE EM Q I RL EL
Sbjct: 632 LTSQLQLADSKS-VHFYAECRALSKRLALAEKSKEALTE-----EMKLASQNISRLQDEL 685
Query: 62 GRQKSLWADVHGKLRSHIDALREQNMELREKLRALQLQRWKARKKS 107
K + D + H+ ++ E + RE++ L++ KK+
Sbjct: 686 TTTKRSYEDQLSMMSDHLCSMNETLSKQREEIDTLKMSSKGNSKKN 731
>gi|24308420 KLRAQ motif containing 1 isoform 2 [Homo sapiens]
Length = 769
Score = 31.6 bits (70), Expect = 0.53
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Query: 2 LAGQLEARDPKEGTHPEDPCPGAGAVMEKTAVAAEVLTEDCNTGEMPPLQQQIIRLHQEL 61
L QL+ D K H C + + E LTE EM Q I RL EL
Sbjct: 667 LTSQLQLADSKS-VHFYAECRALSKRLALAEKSKEALTE-----EMKLASQNISRLQDEL 720
Query: 62 GRQKSLWADVHGKLRSHIDALREQNMELREKLRALQLQRWKARKKS 107
K + D + H+ ++ E + RE++ L++ KK+
Sbjct: 721 TTTKRSYEDQLSMMSDHLCSMNETLSKQREEIDTLKMSSKGNSKKN 766
>gi|208431754 KLRAQ motif containing 1 isoform 1 [Homo sapiens]
Length = 780
Score = 31.6 bits (70), Expect = 0.53
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Query: 2 LAGQLEARDPKEGTHPEDPCPGAGAVMEKTAVAAEVLTEDCNTGEMPPLQQQIIRLHQEL 61
L QL+ D K H C + + E LTE EM Q I RL EL
Sbjct: 678 LTSQLQLADSKS-VHFYAECRALSKRLALAEKSKEALTE-----EMKLASQNISRLQDEL 731
Query: 62 GRQKSLWADVHGKLRSHIDALREQNMELREKLRALQLQRWKARKKS 107
K + D + H+ ++ E + RE++ L++ KK+
Sbjct: 732 TTTKRSYEDQLSMMSDHLCSMNETLSKQREEIDTLKMSSKGNSKKN 777
>gi|241982802 HMG box domain containing 3 [Homo sapiens]
Length = 1292
Score = 31.2 bits (69), Expect = 0.70
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 29 EKTAVAAEVLTEDCNTGEMPPLQQQIIRLHQELGRQKS-----LWADVHGKLRSHIDAL- 82
E T V E+ C T PP +++ ++H E ++ + D++ K++ + L
Sbjct: 9 EVTVVMEEIEEAYCYTSPGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLP 68
Query: 83 -REQNMELREKLRALQLQR-----WKAR-KKSAASPHAGQESHTLALE--PAFGKISPLS 133
E N ++ E R L + KA+ +K P++ + T + P F KI P S
Sbjct: 69 QSEINKKISESWRLLSVAERSYYLEKAKLEKEGLDPNSKLSALTAVVPDIPGFRKILPRS 128
Query: 134 ADEETIPKYAGHKNQSATLLGQRSSSNNSAPPKP 167
D IPK + +++S L + N +P P
Sbjct: 129 -DYIIIPKSSLQEDRSCPQLELCVAQNQMSPKGP 161
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 31.2 bits (69), Expect = 0.70
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 96 LQLQRWKARKKSAASPHAGQESHTLAL-EPAFGKISPLSADEETIPKYAGHKNQSATLLG 154
L L++ A++ AA + Q H +L +P K SP+ + P Y+ + S + +G
Sbjct: 4169 LTLEKQAAKQLPAAILYQKQSKHKKSLIDPKMSKFSPIQESRDLEPDYSSYMTSSTSSIG 4228
Query: 155 QRSS 158
SS
Sbjct: 4229 GISS 4232
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 31.2 bits (69), Expect = 0.70
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 96 LQLQRWKARKKSAASPHAGQESHTLAL-EPAFGKISPLSADEETIPKYAGHKNQSATLLG 154
L L++ A++ AA + Q H +L +P K SP+ + P Y+ + S + +G
Sbjct: 4169 LTLEKQAAKQLPAAILYQKQSKHKKSLIDPKMSKFSPIQESRDLEPDYSSYMTSSTSSIG 4228
Query: 155 QRSS 158
SS
Sbjct: 4229 GISS 4232
>gi|153792230 hypothetical protein LOC57670 [Homo sapiens]
Length = 1884
Score = 30.8 bits (68), Expect = 0.91
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
Query: 127 GKISPLSAD----EETIPKYAGHKNQSATLLGQRSSSNNSAPPKPMSLK--------IER 174
G++SP AD EE+ + AG K A G+ + S PP P S E
Sbjct: 1359 GRVSPSDADSTVSEESSERDAGDKTPGAVNDGRSHRAPQSGPPLPSSGNEQHSSASIFEH 1418
Query: 175 ISSWKTPPQENR---DKNLSRRRQDRRATPTGRPTP 207
+ PP+ +R K Q A P RP+P
Sbjct: 1419 VDRISRPPEASRRVPSKIQLIAMQPIPAPPVQRPSP 1454
>gi|16554562 caspase recruitment domain protein 9 isoform 2 [Homo
sapiens]
Length = 492
Score = 30.8 bits (68), Expect = 0.91
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 50 LQQQIIRLHQELGRQKSLWADVHGKLRSHIDALREQNMELREKLRALQLQ--RWKARKKS 107
+++ I Q + ++ L A H + DALR+Q EL EK LQLQ + +A+ +
Sbjct: 350 MEEVAIERDQAIATREELHAQ-HARGLQEKDALRKQVRELGEKADELQLQVFQCEAQLLA 408
Query: 108 AASPHAGQESHTLALEPAFGKISPLSADEETIPK 141
Q+ TL L SP + E ++P+
Sbjct: 409 VEGRLRRQQLETLVLSSDLEDGSPRRSQELSLPQ 442
>gi|47717131 caspase recruitment domain protein 9 isoform 1 [Homo
sapiens]
Length = 536
Score = 30.8 bits (68), Expect = 0.91
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 50 LQQQIIRLHQELGRQKSLWADVHGKLRSHIDALREQNMELREKLRALQLQ--RWKARKKS 107
+++ I Q + ++ L A H + DALR+Q EL EK LQLQ + +A+ +
Sbjct: 350 MEEVAIERDQAIATREELHAQ-HARGLQEKDALRKQVRELGEKADELQLQVFQCEAQLLA 408
Query: 108 AASPHAGQESHTLALEPAFGKISPLSADEETIPK 141
Q+ TL L SP + E ++P+
Sbjct: 409 VEGRLRRQQLETLVLSSDLEDGSPRRSQELSLPQ 442
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,737,800
Number of Sequences: 37866
Number of extensions: 461609
Number of successful extensions: 2066
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 108
Number of HSP's that attempted gapping in prelim test: 1970
Number of HSP's gapped (non-prelim): 199
length of query: 215
length of database: 18,247,518
effective HSP length: 98
effective length of query: 117
effective length of database: 14,536,650
effective search space: 1700788050
effective search space used: 1700788050
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.