Search of human proteins with 21362112

Search of human proteins with 21362112

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21362112 limb region 1 protein [Homo sapiens]
         (490 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21362112 limb region 1 protein [Homo sapiens]                      954   0.0  
gi|148746216 lipocalin-interacting membrane receptor [Homo sapiens]   574   e-164
gi|31542671 liver regeneration p-53 related protein [Homo sapiens]     45   2e-04
gi|219689113 two pore segment channel 1 isoform 1 [Homo sapiens]       39   0.014
gi|29725622 two pore segment channel 1 isoform 2 [Homo sapiens]        39   0.014
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H...    35   0.12 
gi|50083277 ATPase class I type 8B member 4 [Homo sapiens]             33   0.45 
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]     32   1.3  
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]    32   1.7  
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr...    32   1.7  
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr...    32   1.7  
gi|156104908 myosin heavy chain 6 [Homo sapiens]                       32   1.7  
gi|169163827 PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...    31   2.2  
gi|81295809 pericentrin [Homo sapiens]                                 31   2.2  
gi|27436988 potassium voltage-gated channel, subfamily G, member...    31   2.2  
gi|4505727 peroxisomal biogenesis factor 3 [Homo sapiens]              31   2.9  
gi|40316837 ATPase, class I, type 8B, member 2 isoform a [Homo s...    31   2.9  
gi|51972208 leucine, glutamate and lysine rich 1 [Homo sapiens]        30   3.8  
gi|154759283 cerebellar degeneration-related protein 2-like [Hom...    30   3.8  
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo...    30   5.0  
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo...    30   5.0  
gi|31542943 solute carrier family 35, member F2 [Homo sapiens]         30   6.5  
gi|118572603 ubinuclein 1 [Homo sapiens]                               30   6.5  
gi|118572601 ubinuclein 1 [Homo sapiens]                               30   6.5  
gi|15718675 arachidonate 5-lipoxygenase-activating protein [Homo...    30   6.5  
gi|114842396 ankyrin-repeat and fibronectin type III domain cont...    30   6.5  
gi|42740899 CTAGE family, member 5 isoform 3 [Homo sapiens]            30   6.5  
gi|157502197 hypothetical protein LOC9772 [Homo sapiens]               30   6.5  
gi|93102361 palladin [Homo sapiens]                                    29   8.5  
gi|71061468 centromere protein E [Homo sapiens]                        29   8.5  

>gi|21362112 limb region 1 protein [Homo sapiens]
          Length = 490

 Score =  954 bits (2465), Expect = 0.0
 Identities = 490/490 (100%), Positives = 490/490 (100%)

Query: 1   MEGQDEVSAREQHFHSQVRESTICFLLFAILYVVSYFIITRYKRKSDEQEDEDAIVNRIS 60
           MEGQDEVSAREQHFHSQVRESTICFLLFAILYVVSYFIITRYKRKSDEQEDEDAIVNRIS
Sbjct: 1   MEGQDEVSAREQHFHSQVRESTICFLLFAILYVVSYFIITRYKRKSDEQEDEDAIVNRIS 60

Query: 61  LFLSTFTLAVSAGAVLLLPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCL 120
           LFLSTFTLAVSAGAVLLLPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCL
Sbjct: 61  LFLSTFTLAVSAGAVLLLPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCL 120

Query: 121 FVLMPFAFFFLESEGFAGLKKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASME 180
           FVLMPFAFFFLESEGFAGLKKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASME
Sbjct: 121 FVLMPFAFFFLESEGFAGLKKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASME 180

Query: 181 SLYDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYII 240
           SLYDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYII
Sbjct: 181 SLYDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYII 240

Query: 241 TLEEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVL 300
           TLEEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVL
Sbjct: 241 TLEEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVL 300

Query: 301 LLIETSISVLLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMV 360
           LLIETSISVLLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMV
Sbjct: 301 LLIETSISVLLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMV 360

Query: 361 SSVVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFG 420
           SSVVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFG
Sbjct: 361 SSVVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFG 420

Query: 421 RFNWLGNFYIVLSYNLLFAIVTTLCLVRKFTSAVREELFKALGLHKLHLPNTSRDSETAK 480
           RFNWLGNFYIVLSYNLLFAIVTTLCLVRKFTSAVREELFKALGLHKLHLPNTSRDSETAK
Sbjct: 421 RFNWLGNFYIVLSYNLLFAIVTTLCLVRKFTSAVREELFKALGLHKLHLPNTSRDSETAK 480

Query: 481 PSVNGHQKAL 490
           PSVNGHQKAL
Sbjct: 481 PSVNGHQKAL 490


>gi|148746216 lipocalin-interacting membrane receptor [Homo sapiens]
          Length = 489

 Score =  574 bits (1480), Expect = e-164
 Identities = 288/467 (61%), Positives = 364/467 (77%), Gaps = 3/467 (0%)

Query: 7   VSAREQHFHSQVRESTICFLLFAILYVVSYFIITRYKRKSD--EQEDEDAIVNRISLFLS 64
           +S REQ FH ++RE  I  LLFA LY++ +  +TR+K+ ++    +DEDA VN+I+L L 
Sbjct: 9   LSVREQLFHERIRECIISTLLFATLYILCHIFLTRFKKPAEFTTVDDEDATVNKIALELC 68

Query: 65  TFTLAVSAGAVLLLPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCLFVLM 124
           TFTLA++ GAVLLLPFSIISNE+LLS P+NYYIQWLNGSLIHGLWNL  LFSNL L  LM
Sbjct: 69  TFTLAIALGAVLLLPFSIISNEVLLSLPRNYYIQWLNGSLIHGLWNLVFLFSNLSLIFLM 128

Query: 125 PFAFFFLESEGFAGLKKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASMESLYD 184
           PFA+FF ESEGFAG +KG+  R+ ET+VML+LL LL+LG+VWVASA++D + A+ ESLYD
Sbjct: 129 PFAYFFTESEGFAGSRKGVLGRVYETVVMLMLLTLLVLGMVWVASAIVDKNKANRESLYD 188

Query: 185 LWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYIITLEE 244
            WE+YLPYLYSCIS +G LLLL+CTP+GL+RMF+V G+LLVKP +LEDL+EQ+Y    EE
Sbjct: 189 FWEYYLPYLYSCISFLGVLLLLVCTPLGLARMFSVTGKLLVKPRLLEDLEEQLYCSAFEE 248

Query: 245 EALQRRL-NGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVLLLI 303
            AL RR+ N  S  +  ++  L +++  ++T +  LE+R+KASAW+RNL YP  M+ LL+
Sbjct: 249 AALTRRICNPTSCWLPLDMELLHRQVLALQTQRVLLEKRRKASAWQRNLGYPLAMLCLLV 308

Query: 304 ETSISVLLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMVSSV 363
            T +SVL+VA +IL LL+DE AMP+G +G  +G  S S  G  GA ++++LIFYLMVSSV
Sbjct: 309 LTGLSVLIVAIHILELLIDEAAMPRGMQGTSLGQVSFSKLGSFGAVIQVVLIFYLMVSSV 368

Query: 364 VGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFGRFN 423
           VGFYS   F +  P+  DT MT+IIGNCV +LVLSSALPV SRTLG+TRFDLLGDFGRFN
Sbjct: 369 VGFYSSPLFRSLRPRWHDTAMTQIIGNCVCLLVLSSALPVFSRTLGLTRFDLLGDFGRFN 428

Query: 424 WLGNFYIVLSYNLLFAIVTTLCLVRKFTSAVREELFKALGLHKLHLP 470
           WLGNFYIV  YN  FA +TTLCLV+ FT+AVR EL +A GL +L LP
Sbjct: 429 WLGNFYIVFLYNAAFAGLTTLCLVKTFTAAVRAELIRAFGLDRLPLP 475


>gi|31542671 liver regeneration p-53 related protein [Homo sapiens]
          Length = 540

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 31/219 (14%)

Query: 20  ESTICFLLFAILYVVSYFIITRYKRKSDEQEDEDAIVNRISLFLSTFTLAVSAGAVLLLP 79
           E  I + +F +L +        Y RK   + + + +    S   + F+LA++     LLP
Sbjct: 10  ELVIGWCIFGLLLLAILAFCWIYVRKYQSRRESEVV----STITAIFSLAIALITSALLP 65

Query: 80  FSIISNEILLSFPQNY---YIQWLNGSL--------IHGLWNLASLFSNLCLFVLMPFAF 128
             I     L+S+ +N    +  W N ++        ++G + L S+    C+F  +PF +
Sbjct: 66  VDIF----LVSYMKNQNGTFKDWANANVSRQIEDTVLYGYYTLYSVIL-FCVFFWIPFVY 120

Query: 129 FFLESEGFAGLKK--GIRARILETLVMLLLLALLILGIVWVASALIDN-DAASMESLYDL 185
           F+ E +      K   I+  +  TL  +++ ALL+L   +V   + +N ++   E +  L
Sbjct: 121 FYYEEKDDDDTSKCTQIKTALKYTLGFVVICALLLLVGAFVPLNVPNNKNSTEWEKVKSL 180

Query: 186 WE--------FYLPYLYSCISLMGCLLLLLCTPVGLSRM 216
           +E          L +  S ++L+G L  +  T  G+S +
Sbjct: 181 FEELGSSHGLAALSFSISSLTLIGMLAAITYTAYGMSAL 219


>gi|219689113 two pore segment channel 1 isoform 1 [Homo sapiens]
          Length = 888

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 19/118 (16%)

Query: 352 IILIFYLMVSSVVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGIT 411
           ++L+F++++ +++GFY       F+P   D   + +  + VS+ VL          L   
Sbjct: 309 LLLLFFMIIFAILGFYL------FSPNPSDPYFSTLENSIVSLFVL----------LTTA 352

Query: 412 RFD--LLGDFGRFNWLGNFYIV-LSYNLLFAIVTTLCLVRKFTSAVREELFKALGLHK 466
            F   ++  + R  W   F+IV LS  L F +   L +V    + + +  FK+L LHK
Sbjct: 353 NFPDVMMPSYSRNPWSCVFFIVYLSIELYFIMNLLLAVVFDTFNDIEKRKFKSLLLHK 410


>gi|29725622 two pore segment channel 1 isoform 2 [Homo sapiens]
          Length = 816

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 19/118 (16%)

Query: 352 IILIFYLMVSSVVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGIT 411
           ++L+F++++ +++GFY       F+P   D   + +  + VS+ VL          L   
Sbjct: 237 LLLLFFMIIFAILGFYL------FSPNPSDPYFSTLENSIVSLFVL----------LTTA 280

Query: 412 RFD--LLGDFGRFNWLGNFYIV-LSYNLLFAIVTTLCLVRKFTSAVREELFKALGLHK 466
            F   ++  + R  W   F+IV LS  L F +   L +V    + + +  FK+L LHK
Sbjct: 281 NFPDVMMPSYSRNPWSCVFFIVYLSIELYFIMNLLLAVVFDTFNDIEKRKFKSLLLHK 338


>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
            sapiens]
          Length = 1940

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 17/88 (19%)

Query: 230  LEDLDEQIYIITLEEEALQRR-----------------LNGLSSSVEYNIMELEQELENV 272
            L  LDE I  +T E++ALQ                   LN   S +E  + +LE  LE  
Sbjct: 983  LSGLDETIAKLTREKKALQEAHQQALDDLQAEEDKVNSLNKTKSKLEQQVEDLESSLEQE 1042

Query: 273  KTLKTKLERRKKASAWERNLVYPAVMVL 300
            K L+  LER K+    +  L   +++ L
Sbjct: 1043 KKLRVDLERNKRKLEGDLKLAQESILDL 1070


>gi|50083277 ATPase class I type 8B member 4 [Homo sapiens]
          Length = 1192

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 5/102 (4%)

Query: 90  SFPQNYYIQWLNGSLIHGLWNLASLFSNLCLFVLMPFAFFFLESEGFAGLKKGIRARILE 149
           SF Q  Y+Q L   L+HG W+   +   LC F    FAF  +    + G   G  A+ + 
Sbjct: 847 SFAQFRYLQRL--LLVHGRWSYFRMCKFLCYFFYKNFAFTLVHF--WFGFFCGFSAQTVY 902

Query: 150 TLVMLLLLALLILGIVWVASALIDNDAASMESLYDLWEFYLP 191
               + L  ++   +  +A  + D D +   S+ D  + Y P
Sbjct: 903 DQWFITLFNIVYTSLPVLAMGIFDQDVSDQNSV-DCPQLYKP 943


>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
          Length = 1960

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 18/62 (29%), Positives = 31/62 (50%)

Query: 222 QLLVKPTILEDLDEQIYIITLEEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLER 281
           +L  K   LE++   +     EEE   + L      ++ NI ELE++LE  ++ + KL+ 
Sbjct: 905 RLTAKKQELEEICHDLEARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEESARQKLQL 964

Query: 282 RK 283
            K
Sbjct: 965 EK 966



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 241  TLEEEAL--QRRLNGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVM 298
            TLEEEA   + ++  +       + EL ++LE  K +K  LE+ K+    ER  +   V 
Sbjct: 1175 TLEEEAKTHEAQIQEMRQKHSQAVEELAEQLEQTKRVKANLEKAKQTLENERGELANEVK 1234

Query: 299  VLL 301
            VLL
Sbjct: 1235 VLL 1237


>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
          Length = 1684

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)

Query: 222  QLLVKPTILEDLDEQIYIITLEEEALQRRLNGLSSSVEYNIMELEQELENVKTL--KTKL 279
            +L  K   +EDL+++I I   ++E LQ  +  L SSV+    + E++   +K L  KTK 
Sbjct: 1175 KLTNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQ----QYEEKNTKIKQLLVKTKK 1230

Query: 280  ERRKKASAWERNLVYPA 296
            E      A   +L+  A
Sbjct: 1231 ELADSKQAETDHLILQA 1247


>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
           repeats isoform 2 [Homo sapiens]
          Length = 1403

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 231 EDLDEQIYIITLEEEALQRRLNGLSSSVEYNIM---ELEQELENVKTLKTKLERRKKAS 286
           EDL E++  I  E+  L  ++NGL   +   +M   +LE E E +K+L    E++ + S
Sbjct: 291 EDLKERLRKIQQEQRILLDKVNGLQLQLNEEVMVADDLESEREKLKSLLAAKEKQHEES 349


>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
           repeats isoform 1 [Homo sapiens]
          Length = 1416

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 231 EDLDEQIYIITLEEEALQRRLNGLSSSVEYNIM---ELEQELENVKTLKTKLERRKKAS 286
           EDL E++  I  E+  L  ++NGL   +   +M   +LE E E +K+L    E++ + S
Sbjct: 304 EDLKERLRKIQQEQRILLDKVNGLQLQLNEEVMVADDLESEREKLKSLLAAKEKQHEES 362


>gi|156104908 myosin heavy chain 6 [Homo sapiens]
          Length = 1939

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 17/85 (20%)

Query: 233  LDEQIYIITLEEEALQR--------------RLNGLSSS---VEYNIMELEQELENVKTL 275
            LDE I  +T E++ALQ               ++N LS S   +E  + +LE  LE  K +
Sbjct: 987  LDEIIAKLTKEKKALQEAHQQALDDLQVEEDKVNSLSKSKVKLEQQVDDLEGSLEQEKKV 1046

Query: 276  KTKLERRKKASAWERNLVYPAVMVL 300
            +  LER K+    +  L   ++M L
Sbjct: 1047 RMDLERAKRKLEGDLKLTQESIMDL 1071


>gi|169163827 PREDICTED: similar to UPF0634 protein KIAA1641 [Homo
           sapiens]
          Length = 475

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 27/105 (25%), Positives = 56/105 (53%), Gaps = 7/105 (6%)

Query: 191 PYLYSCISLMGCLLLLL-CTPV-GLSRMFTVMGQLL-VKPTILEDLDEQIYIITLEEEAL 247
           P +YSCI  + C  L+  C  +  +   F +  +L+ +K    E L  +I  +  +   L
Sbjct: 7   PKIYSCILSLLCFFLVTDCVHLLKIKNTFCLWKRLIKLKDNHCEQLRVKIRKLKNKASVL 66

Query: 248 QRRLNG---LSSSVEYNIMELEQELENVKTLKTKLERRKKASAWE 289
           Q+R++    + S +++ I+ELE+EL +++    + E++K+ +  E
Sbjct: 67  QKRISEKEEIKSQLKHEILELEKELCSLR-FAIQQEKKKRRNVEE 110


>gi|81295809 pericentrin [Homo sapiens]
          Length = 3336

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 14/106 (13%)

Query: 206  LLCTPVGLSRMFTVMGQLLV----KPTILEDLDEQIYIITLEEEALQRRLNGLSSSVEYN 261
            LLC+  G  R   + G+L      K  +   L +Q    +   EALQ+RL G   + E  
Sbjct: 1775 LLCSQAGGPRGQALQGELEAALEAKEALSRLLADQERRHSQALEALQQRLQGAEEAAELQ 1834

Query: 262  IMELEQ-------ELENVKTLKTKLE---RRKKASAWERNLVYPAV 297
            + ELE+       E+E++ +   + E   + K+A+  ERNL   A+
Sbjct: 1835 LAELERNVALREAEVEDMASRIQEFEAALKAKEATIAERNLEIDAL 1880


>gi|27436988 potassium voltage-gated channel, subfamily G, member 1
           [Homo sapiens]
          Length = 513

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 305 TSISVLLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLM 359
           T I ++ +    + LLVD  A   G R PG GN+ L   G V   L  + I Y+M
Sbjct: 302 TLIDLVAILPYYITLLVDGAAA--GRRKPGAGNSYLDKVGLVLRVLRALRILYVM 354


>gi|4505727 peroxisomal biogenesis factor 3 [Homo sapiens]
          Length = 373

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 17/78 (21%), Positives = 44/78 (56%), Gaps = 3/78 (3%)

Query: 239 IITLEEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVM 298
           +IT+ ++A+Q+ L  +S     ++++LEQ+L+ ++ L   +E+ K +S   ++   P + 
Sbjct: 179 LITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEIRNL---VEQHKSSSWINKDGSKPLLC 235

Query: 299 VLLLIETSISVLLVACNI 316
             ++ +    + + AC +
Sbjct: 236 HYMMPDEETPLAVQACGL 253


>gi|40316837 ATPase, class I, type 8B, member 2 isoform a [Homo
           sapiens]
          Length = 1223

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 4/93 (4%)

Query: 90  SFPQNYYIQWLNGSLIHGLWNLASLFSNLCLFVLMPFAFFFLESEGFAGLKKGIRARILE 149
           SF Q  ++Q L   L+HG W+   +   LC F    FAF  +    + G   G  A+ + 
Sbjct: 879 SFSQFKFLQRL--LLVHGRWSYLRMCKFLCYFFYKNFAFTMVHF--WFGFFCGFSAQTVY 934

Query: 150 TLVMLLLLALLILGIVWVASALIDNDAASMESL 182
               + L  ++   +  +A  + D D     S+
Sbjct: 935 DQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSM 967


>gi|51972208 leucine, glutamate and lysine rich 1 [Homo sapiens]
          Length = 388

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 18/58 (31%), Positives = 30/58 (51%)

Query: 223 LLVKPTILEDLDEQIYIITLEEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLE 280
           L+    I + L E++ +   +EE ++RR+N   + +E     L Q  E V TLK + E
Sbjct: 10  LMTCQQIYKALQEELTVKEKQEEDIKRRINLAENELEITKTLLNQTREEVLTLKNERE 67


>gi|154759283 cerebellar degeneration-related protein 2-like [Homo
           sapiens]
          Length = 465

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 9/61 (14%)

Query: 232 DLDEQIYIITLEEEALQRRLNGLSSSVE---YNIMELEQE------LENVKTLKTKLERR 282
           DL+   + + LE +A Q++++GL+ ++E     + EL+ +      LE ++ L+ K ERR
Sbjct: 93  DLELTNHRLVLESKAAQQKIHGLTETIERLQAQVEELQAQVEQLRGLEQLRVLREKRERR 152

Query: 283 K 283
           +
Sbjct: 153 R 153


>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
            sapiens]
          Length = 1941

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 17/83 (20%)

Query: 233  LDEQIYIITLEEEALQR--------------RLNGLSSS---VEYNIMELEQELENVKTL 275
            LDE I  +T E++ALQ               ++N L+ +   +E  + +LE  LE  K L
Sbjct: 991  LDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDDLEGSLEQEKKL 1050

Query: 276  KTKLERRKKASAWERNLVYPAVM 298
            +  LER K+    +  L   ++M
Sbjct: 1051 RMDLERAKRKLEGDLKLAQESIM 1073


>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
            sapiens]
          Length = 1941

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 17/83 (20%)

Query: 233  LDEQIYIITLEEEALQR--------------RLNGLSSS---VEYNIMELEQELENVKTL 275
            LDE I  +T E++ALQ               ++N L+ +   +E  + +LE  LE  K L
Sbjct: 991  LDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDDLEGSLEQEKKL 1050

Query: 276  KTKLERRKKASAWERNLVYPAVM 298
            +  LER K+    +  L   ++M
Sbjct: 1051 RMDLERAKRKLEGDLKLAQESIM 1073


>gi|31542943 solute carrier family 35, member F2 [Homo sapiens]
          Length = 374

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 29/159 (18%)

Query: 1   MEGQDEVSAREQHFHSQVRESTICFLLFAILYVVSYFIITRYKRKSDEQEDEDAIVNRIS 60
           M G D ++ RE +  S V    I  LL A LY +S        +K   QE     +  + 
Sbjct: 178 MVGADILAGREDNSGSDVLIGDILVLLGASLYAISNVCEEYIVKKLSRQE----FLGMVG 233

Query: 61  LFLSTFTLAVSAGAVLLLPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLF--SNL 118
           LF +     + +G  LL+                  +++ + + IH  W +A LF    L
Sbjct: 234 LFGT-----IISGIQLLI------------------VEYKDIASIHWDWKIALLFVAFAL 270

Query: 119 CLFVLMPFAFFFLESEGFAGLKKGIRARILETLVMLLLL 157
           C+F L  F    ++      +  GI    L +L + L L
Sbjct: 271 CMFCLYSFMPLVIKVTSATSVNLGILTADLYSLFVGLFL 309


>gi|118572603 ubinuclein 1 [Homo sapiens]
          Length = 1134

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 243 EEEALQRRLNGLSSSVEYN--IMELEQELENVKTLKTKLERRKKASAWE 289
           +EE   RR+ G     ++N  I EL  ++  +K     LER  KA AWE
Sbjct: 498 DEEKGGRRIMGPRKKFQWNDEIRELLCQVVKIKLESQDLERNNKAQAWE 546


>gi|118572601 ubinuclein 1 [Homo sapiens]
          Length = 1134

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 243 EEEALQRRLNGLSSSVEYN--IMELEQELENVKTLKTKLERRKKASAWE 289
           +EE   RR+ G     ++N  I EL  ++  +K     LER  KA AWE
Sbjct: 498 DEEKGGRRIMGPRKKFQWNDEIRELLCQVVKIKLESQDLERNNKAQAWE 546


>gi|15718675 arachidonate 5-lipoxygenase-activating protein [Homo
           sapiens]
          Length = 161

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 5/63 (7%)

Query: 335 IGNASLSTFGFVGAALEIILIFYLMVSSVVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSI 394
           +G  + ST G++     I+ +F + V+ +  +Y + FFG+     D     K I   +S 
Sbjct: 102 LGERTQSTPGYIFGKRIILFLFLMSVAGIFNYYLIFFFGS-----DFENYIKTISTTISP 156

Query: 395 LVL 397
           L+L
Sbjct: 157 LLL 159


>gi|114842396 ankyrin-repeat and fibronectin type III domain
           containing 1 [Homo sapiens]
          Length = 763

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 235 EQIYIITLEEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWE 289
           E  + ++LE  A+   LN L    +  + EL  ++EN        E+ K+  AWE
Sbjct: 200 ESPHFVSLESRAMH--LNTLVQEAQERVSELSAQVENEGFTLDNTEKEKQLKAWE 252


>gi|42740899 CTAGE family, member 5 isoform 3 [Homo sapiens]
          Length = 761

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 6/115 (5%)

Query: 224 LVKPTILEDLDEQIYIITLEEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLERRK 283
           L K   L  +DE+I   T E E  ++R   L   +E  I   + ++  +   K   +   
Sbjct: 408 LEKEEKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSYQGQI--ISHEKKAHDNWL 465

Query: 284 KASAWERNL----VYPAVMVLLLIETSISVLLVACNILCLLVDETAMPKGTRGPG 334
            A   ERNL       A     L ET +   L+  +   L V  TA  +G+RGPG
Sbjct: 466 AARNAERNLNDLRKENAHNRQKLTETELKFELLEKDPYALDVPNTAFGRGSRGPG 520


>gi|157502197 hypothetical protein LOC9772 [Homo sapiens]
          Length = 1356

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 11/118 (9%)

Query: 242 LEEEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWER----NLVYPAV 297
           L+E+ L    + L  S    +  L+++LE V  L+  L  RKK   W+     + ++ + 
Sbjct: 3   LKEKHLGEPPSALGLSTRKALSVLKEQLEAV--LEGHLRERKKCLTWKEVWRSSFLHHSN 60

Query: 298 MVLLLIETSISVLLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILI 355
                     S++L+A  +L LL      P G+RG G+ NAS     F+   L ++LI
Sbjct: 61  RCSCFHWPGASLMLLA--VLLLLGCCGGQPAGSRGVGLVNASAL---FLLLLLNLVLI 113


>gi|93102361 palladin [Homo sapiens]
          Length = 1106

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 244 EEALQRRLNGLSSSVEYNIMELEQELENVKTLKTKLERR 282
           EE + RRL G  S+  +NI E E+E  N +   +  E+R
Sbjct: 705 EERMARRLLGADSATVFNIQEPEEETANQEYKVSSCEQR 743


>gi|71061468 centromere protein E [Homo sapiens]
          Length = 2701

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 17/72 (23%)

Query: 230 LEDLDEQIYIITLEEEAL-------QRRLNGLSSSV----------EYNIMELEQELENV 272
           ++D  E+++IIT E++ L       + R+ GL   +          + N    +QE +N 
Sbjct: 763 IQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNF 822

Query: 273 KTLKTKLERRKK 284
           KTL    E++ K
Sbjct: 823 KTLHMDFEQKYK 834


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.141    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,885,315
Number of Sequences: 37866
Number of extensions: 618030
Number of successful extensions: 2910
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2848
Number of HSP's gapped (non-prelim): 81
length of query: 490
length of database: 18,247,518
effective HSP length: 106
effective length of query: 384
effective length of database: 14,233,722
effective search space: 5465749248
effective search space used: 5465749248
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.