Guide to the Human Genome
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Name: PLA2G12A Sequence: fasta or formatted (189aa) NCBI GI: 21361944
Description:

phospholipase A2, group XIIA

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         11           2
 C cysteine            7.9         15           2
 D aspartate           6.3         12           1
 E glutamate           4.8          9           2
 F phenylalanine       2.1          4           1
 G glycine             6.9         13           2
 H histidine           3.2          6           1
 I isoleucine          3.2          6           1
 K lysine              6.3         12           1
 L leucine            13.2         25           5
 M methionine          1.1          2           1
 N asparagine          3.2          6           1
 P proline             4.8          9           2
 Q glutamine           5.3         10           1
 R arginine            4.8          9           1
 S serine              5.3         10           1
 T threonine           6.9         13           2
 V valine              4.2          8           2
 W tryptophan          0.5          1           1
 Y tyrosine            4.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2, group XIIA 
PLA2G12B              0.391   phospholipase A2, group XIIB 
ZAN                   0.018   zonadhesin isoform 3 
FBN3                  0.013   fibrillin 3 precursor 
PLA2G1B               0.013   phospholipase A2 group IB 
KRTAP21-2             0.013   keratin associated protein 21-2 
CDR2                  0.011   cerebellar degeneration-related protein 2 
PLA2G3                0.011   phospholipase A2, group III precursor 
FBXO31                0.008   F-box protein 31 
LOC100292052          0.008   PREDICTED: similar to hCG1773661 
LOC100287226          0.008   PREDICTED: similar to hCG1773661 
LOC100287226          0.008   PREDICTED: hypothetical protein XP_002343677 
ZNF227                0.008   zinc finger protein 227 
RNF213                0.008   ring finger protein 213 
NOTCH2                0.005   notch 2 preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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