Guide to the Human Genome
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Name: PLA2G12B Sequence: fasta or formatted (195aa) NCBI GI: 45505135
Description:

phospholipase A2, group XIIB

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         11           2
 C cysteine            7.2         14           2
 D aspartate           5.6         11           1
 E glutamate           6.2         12           3
 F phenylalanine       4.6          9           1
 G glycine             9.2         18           3
 H histidine           1.0          2           1
 I isoleucine          1.5          3           1
 K lysine              5.6         11           1
 L leucine            10.8         21           2
 M methionine          2.6          5           1
 N asparagine          3.6          7           1
 P proline             4.6          9           1
 Q glutamine           2.6          5           1
 R arginine            5.1         10           1
 S serine              9.2         18           1
 T threonine           3.6          7           1
 V valine              5.1         10           1
 W tryptophan          2.1          4           1
 Y tyrosine            4.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2, group XIIB 
PLA2G12A              0.376   phospholipase A2, group XIIA 
NPR1                  0.013   natriuretic peptide receptor 1 
DGKH                  0.013   diacylglycerol kinase, eta isoform 1 
DGKH                  0.013   diacylglycerol kinase, eta isoform 2 
DGKQ                  0.010   diacylglycerol kinase, theta 
JAG2                  0.010   jagged 2 isoform b precursor 
JAG2                  0.010   jagged 2 isoform a precursor 
RIC8B                 0.010   resistance to inhibitors of cholinesterase 8 homolog...
WNT10B                0.008   wingless-type MMTV integration site family, member 1...
KRTAP21-2             0.008   keratin associated protein 21-2 
CPT1B                 0.008   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.008   carnitine palmitoyltransferase 1B isoform c 
CPT1B                 0.008   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.008   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.008   carnitine palmitoyltransferase 1B isoform a 
CPT1B                 0.008   carnitine palmitoyltransferase 1B isoform a 
DGKK                  0.008   diacylglycerol kinase kappa 
GRN                   0.005   granulin precursor 
CD97                  0.005   CD97 antigen isoform 1 precursor 
EMR2                  0.005   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.005   egf-like module containing, mucin-like, hormone rece...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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