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Search of human proteins with 21361800
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21361800 hypothetical protein LOC59271 [Homo sapiens]
(441 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21361800 hypothetical protein LOC59271 [Homo sapiens] 903 0.0
gi|14149865 family with sequence similarity 176, member A [Homo ... 96 5e-20
gi|205277349 family with sequence similarity 176, member A [Homo... 96 5e-20
gi|8922567 hypothetical protein LOC55194 [Homo sapiens] 84 3e-16
gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens] 64 4e-10
gi|163792198 latrophilin 3 precursor [Homo sapiens] 64 4e-10
gi|6912464 latrophilin 2 precursor [Homo sapiens] 64 4e-10
gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens] 63 5e-10
gi|116006953 polycystin 1-like 2 isoform c [Homo sapiens] 49 9e-06
gi|116006951 polycystin 1-like 2 isoform a [Homo sapiens] 49 9e-06
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa... 36 0.061
gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Hom... 35 0.18
gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Hom... 35 0.18
gi|7662316 HIV-1 Vpr binding protein [Homo sapiens] 34 0.30
gi|20336305 B-cell CLL/lymphoma 11A isoform 1 [Homo sapiens] 34 0.30
gi|20336307 B-cell CLL/lymphoma 11A isoform 2 [Homo sapiens] 34 0.30
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 33 0.40
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 33 0.40
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 33 0.40
gi|38373682 pleckstrin homology domain containing family G membe... 33 0.40
gi|111154084 pleckstrin homology domain containing family G memb... 33 0.40
gi|111154088 pleckstrin homology domain containing family G memb... 33 0.40
gi|111154080 pleckstrin homology domain containing family G memb... 33 0.40
gi|111154078 pleckstrin homology domain containing family G memb... 33 0.40
gi|6912492 mitogen-activated protein kinase 8 interacting protei... 33 0.40
gi|7706537 mitogen-activated protein kinase 8 interacting protei... 33 0.40
gi|28416913 interleukin 27 [Homo sapiens] 33 0.52
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 32 0.88
gi|53832007 calcium channel, voltage-dependent, L type, alpha 1F... 32 0.88
gi|19923844 coiled-coil domain containing 82 [Homo sapiens] 32 0.88
>gi|21361800 hypothetical protein LOC59271 [Homo sapiens]
Length = 441
Score = 903 bits (2333), Expect = 0.0
Identities = 441/441 (100%), Positives = 441/441 (100%)
Query: 1 MLLPGRARQPPTPQPVQHPGLRRQVEPPGQLLRLFYCTVLVCSKEISALTDFSGYLTKLL 60
MLLPGRARQPPTPQPVQHPGLRRQVEPPGQLLRLFYCTVLVCSKEISALTDFSGYLTKLL
Sbjct: 1 MLLPGRARQPPTPQPVQHPGLRRQVEPPGQLLRLFYCTVLVCSKEISALTDFSGYLTKLL 60
Query: 61 QNHTTYACDGDYLNLQCPRHSTISVQSAFYGQDYQMCSSQKPASQREDSLTCVAATTFQK 120
QNHTTYACDGDYLNLQCPRHSTISVQSAFYGQDYQMCSSQKPASQREDSLTCVAATTFQK
Sbjct: 61 QNHTTYACDGDYLNLQCPRHSTISVQSAFYGQDYQMCSSQKPASQREDSLTCVAATTFQK 120
Query: 121 VLDECQNQRACHLLVNSRVFGPDLCPGSSKYLLVSFKCQPNELKNKTVCEDQELKLHCHE 180
VLDECQNQRACHLLVNSRVFGPDLCPGSSKYLLVSFKCQPNELKNKTVCEDQELKLHCHE
Sbjct: 121 VLDECQNQRACHLLVNSRVFGPDLCPGSSKYLLVSFKCQPNELKNKTVCEDQELKLHCHE 180
Query: 181 SKFLNIYSATYGRRTQERDICSSKAERLPPFDCLSYSALQVLSRRCYGKQRCKIIVNNHH 240
SKFLNIYSATYGRRTQERDICSSKAERLPPFDCLSYSALQVLSRRCYGKQRCKIIVNNHH
Sbjct: 181 SKFLNIYSATYGRRTQERDICSSKAERLPPFDCLSYSALQVLSRRCYGKQRCKIIVNNHH 240
Query: 241 FGSPCLPGVKKYLTVTYACVPKNILTAIDPAIANLKPSLKQKDGEYGINFDPSGSKVLRK 300
FGSPCLPGVKKYLTVTYACVPKNILTAIDPAIANLKPSLKQKDGEYGINFDPSGSKVLRK
Sbjct: 241 FGSPCLPGVKKYLTVTYACVPKNILTAIDPAIANLKPSLKQKDGEYGINFDPSGSKVLRK 300
Query: 301 DGILVSNSLAAFAYIRAHPERAALLFVSSVCIGLALTLCALVIRESCAKDFRDLQLGREQ 360
DGILVSNSLAAFAYIRAHPERAALLFVSSVCIGLALTLCALVIRESCAKDFRDLQLGREQ
Sbjct: 301 DGILVSNSLAAFAYIRAHPERAALLFVSSVCIGLALTLCALVIRESCAKDFRDLQLGREQ 360
Query: 361 LVPGSDKVEEDSEDEEEEEDPSESDFPGELSGFCRTSYPIYSSIEAAELAERIERREQII 420
LVPGSDKVEEDSEDEEEEEDPSESDFPGELSGFCRTSYPIYSSIEAAELAERIERREQII
Sbjct: 361 LVPGSDKVEEDSEDEEEEEDPSESDFPGELSGFCRTSYPIYSSIEAAELAERIERREQII 420
Query: 421 QEIWMNSGLDTSLPRNMGQFY 441
QEIWMNSGLDTSLPRNMGQFY
Sbjct: 421 QEIWMNSGLDTSLPRNMGQFY 441
>gi|14149865 family with sequence similarity 176, member A [Homo
sapiens]
Length = 152
Score = 96.3 bits (238), Expect = 5e-20
Identities = 64/144 (44%), Positives = 89/144 (61%), Gaps = 13/144 (9%)
Query: 304 LVSNSLAAFAYIRAHPERAALLFVSSVCIGLALTLCALVIRESCAKDFRDLQLGREQLVP 363
L+SN LAA++++ +PERAAL FVS VCIGL LTL ALVIR SC D R + G++ L
Sbjct: 16 LLSNILAAYSFVSENPERAALYFVSGVCIGLVLTLAALVIRISCHTDCR-RRPGKKFL-- 72
Query: 364 GSDKVEEDSEDEEEEEDPSESDFPGELS-----GFCRT-SYPIYSSIEAAELAERIERRE 417
+ E S D + ED SE D +LS F RT + +++S E E A+R+E RE
Sbjct: 73 ---QDRESSSDSSDSEDGSE-DTVSDLSVRRHRRFERTLNKNVFTSAEELERAQRLEERE 128
Query: 418 QIIQEIWMNSGLDTSLPRNMGQFY 441
+II+EIWMN + R++ ++Y
Sbjct: 129 RIIREIWMNGQPEVPGTRSLNRYY 152
>gi|205277349 family with sequence similarity 176, member A [Homo
sapiens]
Length = 152
Score = 96.3 bits (238), Expect = 5e-20
Identities = 64/144 (44%), Positives = 89/144 (61%), Gaps = 13/144 (9%)
Query: 304 LVSNSLAAFAYIRAHPERAALLFVSSVCIGLALTLCALVIRESCAKDFRDLQLGREQLVP 363
L+SN LAA++++ +PERAAL FVS VCIGL LTL ALVIR SC D R + G++ L
Sbjct: 16 LLSNILAAYSFVSENPERAALYFVSGVCIGLVLTLAALVIRISCHTDCR-RRPGKKFL-- 72
Query: 364 GSDKVEEDSEDEEEEEDPSESDFPGELS-----GFCRT-SYPIYSSIEAAELAERIERRE 417
+ E S D + ED SE D +LS F RT + +++S E E A+R+E RE
Sbjct: 73 ---QDRESSSDSSDSEDGSE-DTVSDLSVRRHRRFERTLNKNVFTSAEELERAQRLEERE 128
Query: 418 QIIQEIWMNSGLDTSLPRNMGQFY 441
+II+EIWMN + R++ ++Y
Sbjct: 129 RIIREIWMNGQPEVPGTRSLNRYY 152
>gi|8922567 hypothetical protein LOC55194 [Homo sapiens]
Length = 165
Score = 83.6 bits (205), Expect = 3e-16
Identities = 54/133 (40%), Positives = 78/133 (58%), Gaps = 8/133 (6%)
Query: 299 RKDGILVSNSLAAFAYIRAHPERAALLFVSSVCIGLALTLCALVIRESCAKDFRDLQLGR 358
R+D L+SNSLAA+A+IRA+PE L FV VC GL LTLC LVI S A R +
Sbjct: 5 RRDMELLSNSLAAYAHIRANPESFGLYFVLGVCFGLLLTLCLLVISISWAPRPRP-RGPA 63
Query: 359 EQLVPGSDKVEEDSEDEEEEEDPSESDFPGELSGFCRTSYP-------IYSSIEAAELAE 411
++ P S +E + +DE+EE+ + L G ++ P +++S E E A+
Sbjct: 64 QRRDPRSSTLEPEDDDEDEEDTVTRLGPDDTLPGPELSAEPDGPLNVNVFTSAEELERAQ 123
Query: 412 RIERREQIIQEIW 424
R+E RE+I++EIW
Sbjct: 124 RLEERERILREIW 136
>gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens]
Length = 1474
Score = 63.5 bits (153), Expect = 4e-10
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 163 LKNKTVCEDQELKLHCHESKFLNIYSATYGRRTQERDICSSKAERLPPFDCLSYSALQVL 222
++ + CE ++L C S + + +A YGR + IC + ++ C A +++
Sbjct: 35 MRRELACEGYPIELRCPGSDVIMVENANYGRTDDK--ICDADPFQMENVQCYLPDAFKIM 92
Query: 223 SRRCYGKQRCKIIVNNHHFGSPCLPGVKKYLTVTYACVPKNI 264
S+RC + +C ++ + F PC PG KYL V Y CVP +
Sbjct: 93 SQRCNNRTQCVVVAGSDAFPDPC-PGTYKYLEVQYDCVPYKV 133
Score = 60.1 bits (144), Expect = 4e-09
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 67 ACDGDYLNLQCPRHSTISVQSAFYGQ-DYQMCSSQKPASQREDSLTCVAATTFQKVLDEC 125
AC+G + L+CP I V++A YG+ D ++C + + +++ C F+ + C
Sbjct: 40 ACEGYPIELRCPGSDVIMVENANYGRTDDKICDADP---FQMENVQCYLPDAFKIMSQRC 96
Query: 126 QNQRACHLLVNSRVFGPDLCPGSSKYLLVSFKCQPNELKNKT-VC 169
N+ C ++ S F PD CPG+ KYL V + C P +++ K VC
Sbjct: 97 NNRTQCVVVAGSDAF-PDPCPGTYKYLEVQYDCVPYKVEQKVFVC 140
>gi|163792198 latrophilin 3 precursor [Homo sapiens]
Length = 1469
Score = 63.5 bits (153), Expect = 4e-10
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 163 LKNKTVCEDQELKLHCHESKFLNIYSATYGRRTQERDICSSKAERLPPFDCLSYSALQVL 222
++ + CE ++L C + + I SA YGR + IC S ++ C A +++
Sbjct: 30 VRRELSCESYPIELRCPGTDVIMIESANYGRTDDK--ICDSDPAQMENIRCYLPDAYKIM 87
Query: 223 SRRCYGKQRCKIIVNNHHFGSPCLPGVKKYLTVTYACVPKNI 264
S+RC + +C ++ F PC PG KYL V Y CVP +
Sbjct: 88 SQRCNNRTQCAVVAGPDVFPDPC-PGTYKYLEVQYECVPYKV 128
Score = 59.7 bits (143), Expect = 5e-09
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 67 ACDGDYLNLQCPRHSTISVQSAFYGQ-DYQMCSSQKPASQREDSLTCVAATTFQKVLDEC 125
+C+ + L+CP I ++SA YG+ D ++C S PA +++ C ++ + C
Sbjct: 35 SCESYPIELRCPGTDVIMIESANYGRTDDKICDSD-PAQM--ENIRCYLPDAYKIMSQRC 91
Query: 126 QNQRACHLLVNSRVFGPDLCPGSSKYLLVSFKCQPNELKNK 166
N+ C ++ VF PD CPG+ KYL V ++C P +++ K
Sbjct: 92 NNRTQCAVVAGPDVF-PDPCPGTYKYLEVQYECVPYKVEQK 131
>gi|6912464 latrophilin 2 precursor [Homo sapiens]
Length = 1403
Score = 63.5 bits (153), Expect = 4e-10
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 163 LKNKTVCEDQELKLHCHESKFLNIYSATYGRRTQERDICSSKAERLPPFDCLSYSALQVL 222
++ + CE + L C S + I SA YGR + IC + ++ DC A +++
Sbjct: 36 VRRELSCEGYSIDLRCPGSDVIMIESANYGRTDDK--ICDADPFQMENTDCYLPDAFKIM 93
Query: 223 SRRCYGKQRCKIIVNNHHFGSPCLPGVKKYLTVTYACVP 261
++RC + +C ++ + F PC PG KYL V Y CVP
Sbjct: 94 TQRCNNRTQCIVVTGSDVFPDPC-PGTYKYLEVQYECVP 131
Score = 61.2 bits (147), Expect = 2e-09
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 67 ACDGDYLNLQCPRHSTISVQSAFYGQ-DYQMCSSQKPASQREDSLTCVAATTFQKVLDEC 125
+C+G ++L+CP I ++SA YG+ D ++C + + D C F+ + C
Sbjct: 41 SCEGYSIDLRCPGSDVIMIESANYGRTDDKICDADPFQMENTD---CYLPDAFKIMTQRC 97
Query: 126 QNQRACHLLVNSRVFGPDLCPGSSKYLLVSFKCQP 160
N+ C ++ S VF PD CPG+ KYL V ++C P
Sbjct: 98 NNRTQCIVVTGSDVF-PDPCPGTYKYLEVQYECVP 131
>gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens]
Length = 1469
Score = 63.2 bits (152), Expect = 5e-10
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 163 LKNKTVCEDQELKLHCHESKFLNIYSATYGRRTQERDICSSKAERLPPFDCLSYSALQVL 222
++ + CE ++L C S + + +A YGR + IC + ++ C A +++
Sbjct: 35 MRRELACEGYPIELRCPGSDVIMVENANYGRTDDK--ICDADPFQMENVQCYLPDAFKIM 92
Query: 223 SRRCYGKQRCKIIVNNHHFGSPCLPGVKKYLTVTYACVP 261
S+RC + +C ++ + F PC PG KYL V Y CVP
Sbjct: 93 SQRCNNRTQCVVVAGSDAFPDPC-PGTYKYLEVQYDCVP 130
Score = 57.4 bits (137), Expect = 3e-08
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 67 ACDGDYLNLQCPRHSTISVQSAFYGQ-DYQMCSSQKPASQREDSLTCVAATTFQKVLDEC 125
AC+G + L+CP I V++A YG+ D ++C + + +++ C F+ + C
Sbjct: 40 ACEGYPIELRCPGSDVIMVENANYGRTDDKICDADP---FQMENVQCYLPDAFKIMSQRC 96
Query: 126 QNQRACHLLVNSRVFGPDLCPGSSKYLLVSFKCQP 160
N+ C ++ S F PD CPG+ KYL V + C P
Sbjct: 97 NNRTQCVVVAGSDAF-PDPCPGTYKYLEVQYDCVP 130
>gi|116006953 polycystin 1-like 2 isoform c [Homo sapiens]
Length = 991
Score = 48.9 bits (115), Expect = 9e-06
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 67 ACDGDYLNLQCPRHSTISVQSAFYGQDYQMCSSQKPASQREDSLTCVAATTFQKVLDECQ 126
AC+G + C I VQ A YG+ +Q + C A ++V +CQ
Sbjct: 161 ACEGLNATVHCGLGQVIQVQDAVYGRQNPHFCTQDAGRPSDLEQGCSWANVKEEVAGQCQ 220
Query: 127 NQRACHLLVNSRVFGPDLCPGSSKYLLVSFKCQ 159
++C + + FG +LCP YL V ++C+
Sbjct: 221 ELQSCQVAADETYFG-NLCPTQGSYLWVQYQCR 252
Score = 41.2 bits (95), Expect = 0.002
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 169 CEDQELKLHCHESKFLNIYSATYGRRTQERDICSSKAERLPPFD--CLSYSALQVLSRRC 226
CE +HC + + + A YGR Q C+ A R + C + + ++ +C
Sbjct: 162 CEGLNATVHCGLGQVIQVQDAVYGR--QNPHFCTQDAGRPSDLEQGCSWANVKEEVAGQC 219
Query: 227 YGKQRCKIIVNNHHFGSPCLPGVKKYLTVTYAC 259
Q C++ + +FG+ C P YL V Y C
Sbjct: 220 QELQSCQVAADETYFGNLC-PTQGSYLWVQYQC 251
>gi|116006951 polycystin 1-like 2 isoform a [Homo sapiens]
Length = 2459
Score = 48.9 bits (115), Expect = 9e-06
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 67 ACDGDYLNLQCPRHSTISVQSAFYGQDYQMCSSQKPASQREDSLTCVAATTFQKVLDECQ 126
AC+G + C I VQ A YG+ +Q + C A ++V +CQ
Sbjct: 161 ACEGLNATVHCGLGQVIQVQDAVYGRQNPHFCTQDAGRPSDLEQGCSWANVKEEVAGQCQ 220
Query: 127 NQRACHLLVNSRVFGPDLCPGSSKYLLVSFKCQ 159
++C + + FG +LCP YL V ++C+
Sbjct: 221 ELQSCQVAADETYFG-NLCPTQGSYLWVQYQCR 252
Score = 41.2 bits (95), Expect = 0.002
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 169 CEDQELKLHCHESKFLNIYSATYGRRTQERDICSSKAERLPPFD--CLSYSALQVLSRRC 226
CE +HC + + + A YGR Q C+ A R + C + + ++ +C
Sbjct: 162 CEGLNATVHCGLGQVIQVQDAVYGR--QNPHFCTQDAGRPSDLEQGCSWANVKEEVAGQC 219
Query: 227 YGKQRCKIIVNNHHFGSPCLPGVKKYLTVTYAC 259
Q C++ + +FG+ C P YL V Y C
Sbjct: 220 QELQSCQVAADETYFGNLC-PTQGSYLWVQYQC 251
>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
sapiens]
Length = 2997
Score = 36.2 bits (82), Expect = 0.061
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 348 AKDFRDLQLGREQLVPGSDKVEEDSEDEEEEEDPSESDFPGELSGFCRT-SYPIYSSIEA 406
AK Q G + L G D E D EDE+ E P+ + F E+ F + S S+E
Sbjct: 1826 AKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTRTPFKDEIDEFANSPSEDKEESMEI 1885
Query: 407 AELAERIERREQIIQEIWMN-SGLDTSLPR 435
+ E ++ Q W N S L T L R
Sbjct: 1886 HATGKHSESNAELGQLYWPNTSTLTTRLRR 1915
>gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Homo
sapiens]
Length = 1108
Score = 34.7 bits (78), Expect = 0.18
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 349 KDFRDLQLGREQLVPGSDKVEEDSEDEEEEEDPSESDFPGELSGFCRTSYPIYSSIEAAE 408
K+ +LQ +E P D+ EE+ E+E EEE+ E++ GE + + +A+
Sbjct: 1029 KEMEELQEEKECEKPQGDEEEEEEEEEVEEEEVEEAENEGEEAKTEGLMKDDRAESQASS 1088
Query: 409 LAERI-ERREQIIQE 422
L +++ E EQ+ +E
Sbjct: 1089 LGQKVGESSEQVSEE 1103
>gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Homo
sapiens]
Length = 1124
Score = 34.7 bits (78), Expect = 0.18
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 349 KDFRDLQLGREQLVPGSDKVEEDSEDEEEEEDPSESDFPGELSGFCRTSYPIYSSIEAAE 408
K+ +LQ +E P D+ EE+ E+E EEE+ E++ GE + + +A+
Sbjct: 1045 KEMEELQEEKECEKPQGDEEEEEEEEEVEEEEVEEAENEGEEAKTEGLMKDDRAESQASS 1104
Query: 409 LAERI-ERREQIIQE 422
L +++ E EQ+ +E
Sbjct: 1105 LGQKVGESSEQVSEE 1119
>gi|7662316 HIV-1 Vpr binding protein [Homo sapiens]
Length = 1507
Score = 33.9 bits (76), Expect = 0.30
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 355 QLGREQLVPGSDKVEEDSEDEEEEEDPSESD 385
++GR++L D+ E+ E+E+EEED E D
Sbjct: 1388 EVGRQRLAEDEDEEEDQEEEEQEEEDDDEDD 1418
>gi|20336305 B-cell CLL/lymphoma 11A isoform 1 [Homo sapiens]
Length = 835
Score = 33.9 bits (76), Expect = 0.30
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 361 LVP--GSDKVEEDSEDEEEEEDPSESDFPGELSGFCRTSYPIYSSIEAAELAERIER 415
L+P G ++ EED E+EEEEE+ E EL+ R Y S+EAA E R
Sbjct: 478 LIPENGDEEEEEDDEEEEEEEEEEEE----ELTESERVDYGFGLSLEAARHHENSSR 530
>gi|20336307 B-cell CLL/lymphoma 11A isoform 2 [Homo sapiens]
Length = 773
Score = 33.9 bits (76), Expect = 0.30
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 361 LVP--GSDKVEEDSEDEEEEEDPSESDFPGELSGFCRTSYPIYSSIEAAELAERIER 415
L+P G ++ EED E+EEEEE+ E EL+ R Y S+EAA E R
Sbjct: 478 LIPENGDEEEEEDDEEEEEEEEEEEE----ELTESERVDYGFGLSLEAARHHENSSR 530
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 33.5 bits (75), Expect = 0.40
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 364 GSDKVEEDSEDEEEEEDPSESDFPGELSGFCRTSYPIYSSIEAAELAERIERREQIIQE 422
G ++ EE+ EDEEEEED + + E G S P +S++ E+ E+ E +++E
Sbjct: 66 GEEEEEEEEEDEEEEEDDDDDELEDE--GEEEASMPNENSVKEPEI-RCDEKPEDLLEE 121
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 33.5 bits (75), Expect = 0.40
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 364 GSDKVEEDSEDEEEEEDPSESDFPGELSGFCRTSYPIYSSIEAAELAERIERREQIIQE 422
G ++ EE+ EDEEEEED + + E G S P +S++ E+ E+ E +++E
Sbjct: 267 GEEEEEEEEEDEEEEEDDDDDELEDE--GEEEASMPNENSVKEPEI-RCDEKPEDLLEE 322
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 33.5 bits (75), Expect = 0.40
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 364 GSDKVEEDSEDEEEEEDPSESDFPGELSGFCRTSYPIYSSIEAAELAERIERREQIIQE 422
G ++ EE+ EDEEEEED + + E G S P +S++ E+ E+ E +++E
Sbjct: 267 GEEEEEEEEEDEEEEEDDDDDELEDE--GEEEASMPNENSVKEPEI-RCDEKPEDLLEE 322
>gi|38373682 pleckstrin homology domain containing family G member 5
isoform a [Homo sapiens]
Length = 1006
Score = 33.5 bits (75), Expect = 0.40
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 354 LQLGREQLVPGSDK----VEEDSEDEEEEEDPSESDFPGELSGFCRTSYP 399
LQ R Q PGS + +EE+ +++EEEE+ E + GE SG S P
Sbjct: 686 LQQLRAQEPPGSQQPLQSLEEEEDEQEEEEEEEEEEEEGEDSGTSAASSP 735
>gi|111154084 pleckstrin homology domain containing family G member
5 isoform b [Homo sapiens]
Length = 1083
Score = 33.5 bits (75), Expect = 0.40
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 354 LQLGREQLVPGSDK----VEEDSEDEEEEEDPSESDFPGELSGFCRTSYP 399
LQ R Q PGS + +EE+ +++EEEE+ E + GE SG S P
Sbjct: 763 LQQLRAQEPPGSQQPLQSLEEEEDEQEEEEEEEEEEEEGEDSGTSAASSP 812
>gi|111154088 pleckstrin homology domain containing family G member
5 isoform a [Homo sapiens]
Length = 1006
Score = 33.5 bits (75), Expect = 0.40
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 354 LQLGREQLVPGSDK----VEEDSEDEEEEEDPSESDFPGELSGFCRTSYP 399
LQ R Q PGS + +EE+ +++EEEE+ E + GE SG S P
Sbjct: 686 LQQLRAQEPPGSQQPLQSLEEEEDEQEEEEEEEEEEEEGEDSGTSAASSP 735
>gi|111154080 pleckstrin homology domain containing family G member
5 isoform a [Homo sapiens]
Length = 1006
Score = 33.5 bits (75), Expect = 0.40
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 354 LQLGREQLVPGSDK----VEEDSEDEEEEEDPSESDFPGELSGFCRTSYP 399
LQ R Q PGS + +EE+ +++EEEE+ E + GE SG S P
Sbjct: 686 LQQLRAQEPPGSQQPLQSLEEEEDEQEEEEEEEEEEEEGEDSGTSAASSP 735
>gi|111154078 pleckstrin homology domain containing family G member
5 isoform c [Homo sapiens]
Length = 1062
Score = 33.5 bits (75), Expect = 0.40
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 354 LQLGREQLVPGSDK----VEEDSEDEEEEEDPSESDFPGELSGFCRTSYP 399
LQ R Q PGS + +EE+ +++EEEE+ E + GE SG S P
Sbjct: 742 LQQLRAQEPPGSQQPLQSLEEEEDEQEEEEEEEEEEEEGEDSGTSAASSP 791
>gi|6912492 mitogen-activated protein kinase 8 interacting protein 2
isoform 1 [Homo sapiens]
Length = 824
Score = 33.5 bits (75), Expect = 0.40
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 366 DKVEEDSEDEEEEEDPSESDFPGELSG 392
D EED EDEEEEE+ E D G+ G
Sbjct: 86 DNEEEDDEDEEEEEEEEEGDGEGQEGG 112
>gi|7706537 mitogen-activated protein kinase 8 interacting protein 2
isoform 2 [Homo sapiens]
Length = 797
Score = 33.5 bits (75), Expect = 0.40
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 366 DKVEEDSEDEEEEEDPSESDFPGELSG 392
D EED EDEEEEE+ E D G+ G
Sbjct: 59 DNEEEDDEDEEEEEEEEEGDGEGQEGG 85
>gi|28416913 interleukin 27 [Homo sapiens]
Length = 243
Score = 33.1 bits (74), Expect = 0.52
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 350 DFRDLQ--LGREQLVPGSDKVEEDSEDEEEEEDPSESDFPG----ELSGFCRTSYP 399
D RDLQ L + L G + EE+ E+EEEEE+ + PG L G + S+P
Sbjct: 143 DLRDLQRHLRFQVLAAGFNLPEEEEEEEEEEEEERKGLLPGALGSALQGPAQVSWP 198
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 32.3 bits (72), Expect = 0.88
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 358 REQLVPGSDKVEEDSEDEEEEEDPSESD 385
+E+ GS++ E+DS+DEEEEE+ E D
Sbjct: 2417 QEEDSSGSNEDEDDSQDEEEEEEEDEED 2444
Score = 30.0 bits (66), Expect = 4.4
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 366 DKVEEDSEDEEEEEDPSESDFPGELSGFCRTSYPIYSSIEAAELA--ERIERREQIIQEI 423
++ EED ED++E+++ E D + G Y + A+ L ER +R + +I E
Sbjct: 2436 EEEEEDEEDDQEDDEGEEGDEDDDDDGSEMELDEDYPDMNASPLVRFERFDREDDLIIEF 2495
Query: 424 WMNSGLDTSLPRNMG 438
T +P + G
Sbjct: 2496 DNMFSSATDIPPSPG 2510
>gi|53832007 calcium channel, voltage-dependent, L type, alpha 1F
subunit [Homo sapiens]
Length = 1977
Score = 32.3 bits (72), Expect = 0.88
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 8/49 (16%)
Query: 352 RDLQLGREQLVPGSDKVEE--------DSEDEEEEEDPSESDFPGELSG 392
+DL E LVPG +K EE D E+EEEEE+ E + E +G
Sbjct: 780 KDLPQENEGLVPGVEKEEEEGARREGADMEEEEEEEEEEEEEEEEEGAG 828
>gi|19923844 coiled-coil domain containing 82 [Homo sapiens]
Length = 544
Score = 32.3 bits (72), Expect = 0.88
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 8/46 (17%)
Query: 344 RESCAKDFRDLQLGREQLVPGSDKVEEDSEDEEEEEDPSESDFPGE 389
R S +DF D + ++ P SD+V DEEEEED ESD G+
Sbjct: 254 RRSSGRDFEDSE---KESCPSSDEV-----DEEEEEDNYESDEDGD 291
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,048,996
Number of Sequences: 37866
Number of extensions: 927649
Number of successful extensions: 9400
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 8077
Number of HSP's gapped (non-prelim): 770
length of query: 441
length of database: 18,247,518
effective HSP length: 105
effective length of query: 336
effective length of database: 14,271,588
effective search space: 4795253568
effective search space used: 4795253568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.