PKD1L2 1641

Name: PKD1L2	Sequence: fasta or formatted (991aa)		NCBI GI: 116006953
Description: polycystin 1-like 2 isoform c		Referenced in: Arachidonate, Prostaglandins, and Leukotrienes Kidney
Other entries for this name: alt prot [2459aa] polycystin 1-like 2 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 75 4 C cysteine 3.6 36 1 D aspartate 4.0 40 1 E glutamate 7.2 71 2 F phenylalanine 3.5 35 1 G glycine 7.9 78 2 H histidine 1.9 19 1 I isoleucine 3.2 32 2 K lysine 1.6 16 1 L leucine 10.5 104 3 M methionine 1.3 13 1 N asparagine 3.3 33 2 P proline 5.1 51 3 Q glutamine 6.2 61 2 R arginine 4.7 47 1 S serine 8.7 86 2 T threonine 8.1 80 3 V valine 7.6 75 2 W tryptophan 2.2 22 2 Y tyrosine 1.7 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 polycystin 1-like 2 isoform c PKD1L2 0.978 polycystin 1-like 2 isoform a COLEC12 0.024 collectin sub-family member 12 CLEC10A 0.019 C-type lectin, superfamily member 14 isoform 1 [Homo... CLEC10A 0.019 C-type lectin, superfamily member 14 isoform 2 [Homo... ASGR2 0.016 asialoglycoprotein receptor 2 isoform c ASGR2 0.016 asialoglycoprotein receptor 2 isoform b ASGR2 0.016 asialoglycoprotein receptor 2 isoform a ASGR2 0.016 asialoglycoprotein receptor 2 isoform a PLA2R1 0.015 phospholipase A2 receptor 1 isoform 2 precursor [Hom... PLA2R1 0.015 phospholipase A2 receptor 1 isoform 1 precursor [Hom... BCAN 0.015 brevican isoform 1 FCER2 0.014 Fc fragment of IgE, low affinity II, receptor for (C... LPHN1 0.014 latrophilin 1 isoform 1 precursor LPHN1 0.014 latrophilin 1 isoform 2 precursor MRC1 0.013 mannose receptor C type 1 precursor MRC1L1 0.013 mannose receptor, C type 1-like 1 MRC2 0.013 mannose receptor, C type 2 LPHN3 0.013 latrophilin 3 precursor CHODL 0.013 chondrolectin precursor LPHN2 0.013 latrophilin 2 precursor ASGR1 0.013 asialoglycoprotein receptor 1 VCAN 0.012 versican isoform 2 VCAN 0.012 versican isoform 1 C21orf63 0.012 hypothetical protein LOC59271 CLEC4G 0.012 C-type lectin domain family 4, member G CD207 0.012 CD207 antigen, langerin REG1B 0.012 regenerating islet-derived 1 beta precursor LY75 0.011 lymphocyte antigen 75 LAYN 0.011 layilin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.