Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 21361684
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21361684 G patch domain containing 1 [Homo sapiens]
(931 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21361684 G patch domain containing 1 [Homo sapiens] 1873 0.0
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 53 2e-06
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 53 2e-06
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 53 2e-06
gi|239752449 PREDICTED: hypothetical protein [Homo sapiens] 52 3e-06
gi|56090620 NFKB activating protein-like [Homo sapiens] 52 3e-06
gi|168229156 NFKB activating protein [Homo sapiens] 52 3e-06
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 52 3e-06
gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 52 3e-06
gi|221219020 NYD-SP11 protein [Homo sapiens] 51 4e-06
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 51 4e-06
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 51 4e-06
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 51 6e-06
gi|117553580 adaptor-related protein complex 3, delta 1 subunit ... 50 7e-06
gi|217330641 IWS1 homolog [Homo sapiens] 50 7e-06
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 50 1e-05
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 50 1e-05
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 49 2e-05
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 49 2e-05
gi|39932583 hypothetical protein LOC55051 isoform 1 [Homo sapiens] 49 2e-05
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 49 3e-05
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 49 3e-05
gi|4507347 TBP-associated factor 2 [Homo sapiens] 49 3e-05
gi|8923271 coiled-coil domain containing 49 [Homo sapiens] 48 4e-05
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi... 48 5e-05
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 47 6e-05
gi|40068059 CBF1 interacting corepressor [Homo sapiens] 47 8e-05
gi|11067749 bromodomain containing protein 3 [Homo sapiens] 47 8e-05
gi|42718020 retinitis pigmentosa 9 [Homo sapiens] 47 8e-05
gi|87299628 biorientation of chromosomes in cell division 1-like... 47 1e-04
>gi|21361684 G patch domain containing 1 [Homo sapiens]
Length = 931
Score = 1873 bits (4851), Expect = 0.0
Identities = 931/931 (100%), Positives = 931/931 (100%)
Query: 1 MAARDSDSEEDLVSYGTGLEPLEEGERPKKPIPLQDQTVRDEKGRYKRFHGAFSGGFSAG 60
MAARDSDSEEDLVSYGTGLEPLEEGERPKKPIPLQDQTVRDEKGRYKRFHGAFSGGFSAG
Sbjct: 1 MAARDSDSEEDLVSYGTGLEPLEEGERPKKPIPLQDQTVRDEKGRYKRFHGAFSGGFSAG 60
Query: 61 YFNTVGSKEGWTPSTFVSSRQNRADKSVLGPEDFMDEEDLSEFGIAPKAIVTTDDFASKT 120
YFNTVGSKEGWTPSTFVSSRQNRADKSVLGPEDFMDEEDLSEFGIAPKAIVTTDDFASKT
Sbjct: 61 YFNTVGSKEGWTPSTFVSSRQNRADKSVLGPEDFMDEEDLSEFGIAPKAIVTTDDFASKT 120
Query: 121 KDRIREKARQLAAATAPIPGATLLDDLITPAKLSVGFELLRKMGWKEGQGVGPRVKRRPR 180
KDRIREKARQLAAATAPIPGATLLDDLITPAKLSVGFELLRKMGWKEGQGVGPRVKRRPR
Sbjct: 121 KDRIREKARQLAAATAPIPGATLLDDLITPAKLSVGFELLRKMGWKEGQGVGPRVKRRPR 180
Query: 181 RQKPDPGVKIYGCALPPGSSEGSEGEDDDYLPDNVTFAPKDVTPVDFTPKDNVHGLAYKG 240
RQKPDPGVKIYGCALPPGSSEGSEGEDDDYLPDNVTFAPKDVTPVDFTPKDNVHGLAYKG
Sbjct: 181 RQKPDPGVKIYGCALPPGSSEGSEGEDDDYLPDNVTFAPKDVTPVDFTPKDNVHGLAYKG 240
Query: 241 LDPHQALFGTSGEHFNLFSGGSERAGDLGEIGLNKGRKLGISGQAFGVGALEEEDDDIYA 300
LDPHQALFGTSGEHFNLFSGGSERAGDLGEIGLNKGRKLGISGQAFGVGALEEEDDDIYA
Sbjct: 241 LDPHQALFGTSGEHFNLFSGGSERAGDLGEIGLNKGRKLGISGQAFGVGALEEEDDDIYA 300
Query: 301 TETLSKYDTVLKDEEPGDGLYGWTAPRQYKNQKESEKDLRYVGKILDGFSLASKPLSSKK 360
TETLSKYDTVLKDEEPGDGLYGWTAPRQYKNQKESEKDLRYVGKILDGFSLASKPLSSKK
Sbjct: 301 TETLSKYDTVLKDEEPGDGLYGWTAPRQYKNQKESEKDLRYVGKILDGFSLASKPLSSKK 360
Query: 361 IYPPPELPRDYRPVHYFRPMVAATSENSHLLQVLSESAGKATPDPGTHSKHQLNASKRAE 420
IYPPPELPRDYRPVHYFRPMVAATSENSHLLQVLSESAGKATPDPGTHSKHQLNASKRAE
Sbjct: 361 IYPPPELPRDYRPVHYFRPMVAATSENSHLLQVLSESAGKATPDPGTHSKHQLNASKRAE 420
Query: 421 LLGETPIQGSATSVLEFLSQKDKERIKEMKQATDLKAAQLKARSLAQNAQSSRAQLSPAA 480
LLGETPIQGSATSVLEFLSQKDKERIKEMKQATDLKAAQLKARSLAQNAQSSRAQLSPAA
Sbjct: 421 LLGETPIQGSATSVLEFLSQKDKERIKEMKQATDLKAAQLKARSLAQNAQSSRAQLSPAA 480
Query: 481 AAGHCSWNMALGGGTATLKASNFKPFAKDPEKQKRYDEFLVHMKQGQKDALERCLDPSMT 540
AAGHCSWNMALGGGTATLKASNFKPFAKDPEKQKRYDEFLVHMKQGQKDALERCLDPSMT
Sbjct: 481 AAGHCSWNMALGGGTATLKASNFKPFAKDPEKQKRYDEFLVHMKQGQKDALERCLDPSMT 540
Query: 541 EWERGRERDEFARAALLYASSHSTLSSRFTHAKEEDDSDQVEVPRDQENDVGDKQSAVKM 600
EWERGRERDEFARAALLYASSHSTLSSRFTHAKEEDDSDQVEVPRDQENDVGDKQSAVKM
Sbjct: 541 EWERGRERDEFARAALLYASSHSTLSSRFTHAKEEDDSDQVEVPRDQENDVGDKQSAVKM 600
Query: 601 KMFGKLTRDTFEWHPDKLLCKRFNVPDPYPDSTLVGLPRVKRDKYSVFNFLTLPETASLP 660
KMFGKLTRDTFEWHPDKLLCKRFNVPDPYPDSTLVGLPRVKRDKYSVFNFLTLPETASLP
Sbjct: 601 KMFGKLTRDTFEWHPDKLLCKRFNVPDPYPDSTLVGLPRVKRDKYSVFNFLTLPETASLP 660
Query: 661 TTQASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNK 720
TTQASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNK
Sbjct: 661 TTQASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNK 720
Query: 721 EEEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQ 780
EEEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQ
Sbjct: 721 EEEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQ 780
Query: 781 AGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCP 840
AGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCP
Sbjct: 781 AGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCP 840
Query: 841 NARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESS 900
NARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESS
Sbjct: 841 NARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESS 900
Query: 901 DSSDSQSDEETADVSPQELLRRLKSLPLRRQ 931
DSSDSQSDEETADVSPQELLRRLKSLPLRRQ
Sbjct: 901 DSSDSQSDEETADVSPQELLRRLKSLPLRRQ 931
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 52.8 bits (125), Expect = 2e-06
Identities = 27/88 (30%), Positives = 46/88 (52%)
Query: 844 QTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSS 903
+T E +KE +K K K K K++ ++KK K+ + RK K + ++K K+ K E
Sbjct: 18 ETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREE 77
Query: 904 DSQSDEETADVSPQELLRRLKSLPLRRQ 931
+ + +EE + +E RR K RR+
Sbjct: 78 EEEEEEEEKEEEEKEEGRRRKKKKKRRR 105
Score = 48.1 bits (113), Expect = 4e-05
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 844 QTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQK-------NKKPEKSSS 896
+T E + E+ ++ + K K K++ +RK+++KKK K K K+K +K +K
Sbjct: 12 ETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKE 71
Query: 897 SESSDSSDSQSDEETADVSPQELLRRLKSLPLRRQ 931
E + + + +EE + +E RR K RR+
Sbjct: 72 EEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRK 106
Score = 38.5 bits (88), Expect = 0.029
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 852 EKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDEE 910
+K KK K + + +E +E+++K K K K K+K K+ EK ++ ++ + +EE
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEE 59
Score = 36.6 bits (83), Expect = 0.11
Identities = 14/48 (29%), Positives = 33/48 (68%)
Query: 847 EVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKS 894
E ++E+ ++ ++K + +KE R+++KKKK R+ + + ++K K+ K+
Sbjct: 73 EEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKT 120
Score = 35.8 bits (81), Expect = 0.19
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 850 QKEKHKKNKDKHKAK------KEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSS 903
+KEK KK K+ K K K+ +RK++KKK+ + + + +++ ++ E+ E
Sbjct: 39 EKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRK 98
Query: 904 DSQSDEETADVSPQELLRRLKS 925
+ + ++ RR K+
Sbjct: 99 KKKKRRRKEEEEEKKKKRRRKT 120
Score = 35.4 bits (80), Expect = 0.25
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 847 EVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQK 887
E ++E+ K+ + K KK+ RRK+E+++K +K + K K+K
Sbjct: 83 EEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKKK 123
Score = 32.7 bits (73), Expect = 1.6
Identities = 15/60 (25%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 843 RQTLEVPQKEKHKKNKDKHKAKKEHRRKKE----KKKKHRKHKHKGKQKNKKPEKSSSSE 898
R+ + ++E+ ++ +++ + +KE K+E KKKK R+ K + ++K KK + + +
Sbjct: 64 RKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKKK 123
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 52.8 bits (125), Expect = 2e-06
Identities = 52/255 (20%), Positives = 107/255 (41%), Gaps = 27/255 (10%)
Query: 657 ASLPTTQASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARS-KAEPPKQQSS 715
A+ T + + E S + P K R+ + + KE S ++ L + + + K+Q +
Sbjct: 1513 ATYDTKRPNEETKSVDKNPCKDREKHVLEARNN--KESSGNKLLYILNPPETQVEKEQIT 1570
Query: 716 PLVNKEE-EHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQG 774
++K + P+LS + ++ D+ + + P + S S+ S E+E
Sbjct: 1571 GQIDKSTVKPKPQLSHSSRLSSDLTRETDEAAFEPDYN------ESDSESNVSVKEEESS 1624
Query: 775 -----DSEDDQAGSGEANFQSSQDTDLGETSSVAHA---LVPAPQEPPPSFPIQKMQIDE 826
D +D + + ++ +G + + +H+ + P+ P +
Sbjct: 1625 GNISKDLKDKIVEKAKESLDTAAVVQVGISRNQSHSSPSVSPSRSHSPSG--------SQ 1676
Query: 827 REEFGPRLPPVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQ 886
++++ + +K+KHKK+K KHK K+H + + +K +KHKHK K+
Sbjct: 1677 TRSHSSSASSAESQDSKKKKKKKEKKKHKKHK-KHKKHKKHAGTEVELEKSQKHKHKKKK 1735
Query: 887 KNKKPEKSSSSESSD 901
K +K E D
Sbjct: 1736 SKKNKDKEKEKEKDD 1750
Score = 36.6 bits (83), Expect = 0.11
Identities = 56/256 (21%), Positives = 99/256 (38%), Gaps = 28/256 (10%)
Query: 676 DKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTVN 735
+ SRK SR T E K DS+ F+ +R A P + + + E S ++
Sbjct: 921 ETSRK-SREPTGVEENKTDSL--FVLPSRDDATPVRDEPM-----DAESITFKSVSEKDK 972
Query: 736 KDVDA-QAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDT 794
++ D +A+G+ ++ D A+ + K + E+ D E +++ E + +++
Sbjct: 973 RERDKPKAKGDKTKRKND-GSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKAKEE 1031
Query: 795 DLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKH 854
P S QK DE+ PR Q + ++EK
Sbjct: 1032 ------------TPKTDNTKSSSSSQK---DEKITGTPRKAHSKSAKEHQETKPVKEEKV 1076
Query: 855 KKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDEETADV 914
KK+ K ++ K+EK KK + K K + K EK D + + +
Sbjct: 1077 KKDYSKDVKSEKLTTKEEKAKKPNE---KNKPLDNKGEKRKRKTEEKGVDKDFESSSMKI 1133
Query: 915 SPQELLRRLKSLPLRR 930
S E+ +K P R+
Sbjct: 1134 SKLEVTEIVKPSPKRK 1149
Score = 35.4 bits (80), Expect = 0.25
Identities = 33/167 (19%), Positives = 70/167 (41%), Gaps = 14/167 (8%)
Query: 663 QASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEE 722
+A S+ +H+ KP + + K + +D SE L+ KA+ P +++ PL NK E
Sbjct: 1056 KAHSKSAKEHQ----ETKPVKEEKVKKDYSKDVKSEKLTTKEEKAKKPNEKNKPLDNKGE 1111
Query: 723 EHAPELSANQTVNKDVDAQAEGEGSRPS-MDLFRAIFASSSDEKSSSSEDEQGDSEDDQ- 780
+ +T K VD E + S +++ + S + +E E D+
Sbjct: 1112 KR-----KRKTEEKGVDKDFESSSMKISKLEVTEIVKPSPKRKMEPDTEKMDRTPEKDKI 1166
Query: 781 ---AGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQI 824
A + + +G T ++++ P+ + S +++ ++
Sbjct: 1167 SLSAPAKKIKLNRETGKKIGSTENISNTKEPSEKLESTSSKVKQEKV 1213
Score = 34.7 bits (78), Expect = 0.42
Identities = 71/344 (20%), Positives = 125/344 (36%), Gaps = 55/344 (15%)
Query: 558 YASSHSTLSSRFTHAKEEDDSDQVEVPRDQENDVGDKQSAVKMKMFGKLTRDTFEWHPDK 617
Y S+ ST S ++E+ D+ + + +E + + A + + ++ + +W D
Sbjct: 1234 YTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQS--KWDKDD 1291
Query: 618 LLCKRFNVPDPYPDSTLVGLPR--VKRDKYSVFNFLTLPETASLPTTQASSEKVSQHRGP 675
+ +V P S+ VG P +K N + PE S P SEK+
Sbjct: 1292 FESEEEDVKSTQPISS-VGKPASVIKNVSTKPSNIVKYPEKESEP-----SEKIQ----- 1340
Query: 676 DKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTVN 735
K K + +HE K S A S+ K + ++ KE + S
Sbjct: 1341 -KFTKDVSHEIIQHEVKSSKNS-----ASSEKGKTKDRDYSVLEKENPEKRKNSTQPEKE 1394
Query: 736 KDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTD 795
++D E +G+ F+++ SS + ++S D S + N D D
Sbjct: 1395 SNLDRLNE-QGN------FKSLSQSSKEARTSDKHDSTRASSNKDF---TPNRDKKTDYD 1444
Query: 796 LGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHK 855
E SS + DE+ E R P+ + QK K +
Sbjct: 1445 TREYSS-------------------SKRRDEKNELTRRKDS---PSRNKDSASGQKNKPR 1482
Query: 856 KNKD-KHKAKKEHRRKKEKKKKHRK-HKHKGKQKNKKPEKSSSS 897
+ +D K + ++ + RK H HK K+P + + S
Sbjct: 1483 EERDLPKKGTGDSKKSNSSPSRDRKPHDHKATYDTKRPNEETKS 1526
Score = 30.4 bits (67), Expect = 8.0
Identities = 39/239 (16%), Positives = 88/239 (36%), Gaps = 20/239 (8%)
Query: 682 SRWDTSKHEKKEDSI--SEFLSLARSKAEPPKQQS---SPLVNKEEEHAPELSANQTVNK 736
S+WD E +E+ + ++ +S A K S S +V E+ + Q K
Sbjct: 1285 SKWDKDDFESEEEDVKSTQPISSVGKPASVIKNVSTKPSNIVKYPEKESEPSEKIQKFTK 1344
Query: 737 DVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTDL 796
DV + + S + S+S EK + + + E + + + Q ++++L
Sbjct: 1345 DVSHEIIQHEVKSSKN-------SASSEKGKTKDRDYSVLEKENPEKRKNSTQPEKESNL 1397
Query: 797 GETSSVAH--ALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKH 854
+ + +L + +E S + ++F P + + + +
Sbjct: 1398 DRLNEQGNFKSLSQSSKEARTSDKHDSTRASSNKDFTPNR------DKKTDYDTREYSSS 1451
Query: 855 KKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDEETAD 913
K+ +K++ + K K+K +++ P+K + +S D + D
Sbjct: 1452 KRRDEKNELTRRKDSPSRNKDSASGQKNKPREERDLPKKGTGDSKKSNSSPSRDRKPHD 1510
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 52.8 bits (125), Expect = 2e-06
Identities = 52/255 (20%), Positives = 107/255 (41%), Gaps = 27/255 (10%)
Query: 657 ASLPTTQASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARS-KAEPPKQQSS 715
A+ T + + E S + P K R+ + + KE S ++ L + + + K+Q +
Sbjct: 1547 ATYDTKRPNEETKSVDKNPCKDREKHVLEARNN--KESSGNKLLYILNPPETQVEKEQIT 1604
Query: 716 PLVNKEE-EHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQG 774
++K + P+LS + ++ D+ + + P + S S+ S E+E
Sbjct: 1605 GQIDKSTVKPKPQLSHSSRLSSDLTRETDEAAFEPDYN------ESDSESNVSVKEEESS 1658
Query: 775 -----DSEDDQAGSGEANFQSSQDTDLGETSSVAHA---LVPAPQEPPPSFPIQKMQIDE 826
D +D + + ++ +G + + +H+ + P+ P +
Sbjct: 1659 GNISKDLKDKIVEKAKESLDTAAVVQVGISRNQSHSSPSVSPSRSHSPSG--------SQ 1710
Query: 827 REEFGPRLPPVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQ 886
++++ + +K+KHKK+K KHK K+H + + +K +KHKHK K+
Sbjct: 1711 TRSHSSSASSAESQDSKKKKKKKEKKKHKKHK-KHKKHKKHAGTEVELEKSQKHKHKKKK 1769
Query: 887 KNKKPEKSSSSESSD 901
K +K E D
Sbjct: 1770 SKKNKDKEKEKEKDD 1784
Score = 36.6 bits (83), Expect = 0.11
Identities = 56/256 (21%), Positives = 99/256 (38%), Gaps = 28/256 (10%)
Query: 676 DKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTVN 735
+ SRK SR T E K DS+ F+ +R A P + + + E S ++
Sbjct: 955 ETSRK-SREPTGVEENKTDSL--FVLPSRDDATPVRDEPM-----DAESITFKSVSEKDK 1006
Query: 736 KDVDA-QAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDT 794
++ D +A+G+ ++ D A+ + K + E+ D E +++ E + +++
Sbjct: 1007 RERDKPKAKGDKTKRKND-GSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKAKEE 1065
Query: 795 DLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKH 854
P S QK DE+ PR Q + ++EK
Sbjct: 1066 ------------TPKTDNTKSSSSSQK---DEKITGTPRKAHSKSAKEHQETKPVKEEKV 1110
Query: 855 KKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDEETADV 914
KK+ K ++ K+EK KK + K K + K EK D + + +
Sbjct: 1111 KKDYSKDVKSEKLTTKEEKAKKPNE---KNKPLDNKGEKRKRKTEEKGVDKDFESSSMKI 1167
Query: 915 SPQELLRRLKSLPLRR 930
S E+ +K P R+
Sbjct: 1168 SKLEVTEIVKPSPKRK 1183
Score = 35.4 bits (80), Expect = 0.25
Identities = 33/167 (19%), Positives = 70/167 (41%), Gaps = 14/167 (8%)
Query: 663 QASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEE 722
+A S+ +H+ KP + + K + +D SE L+ KA+ P +++ PL NK E
Sbjct: 1090 KAHSKSAKEHQ----ETKPVKEEKVKKDYSKDVKSEKLTTKEEKAKKPNEKNKPLDNKGE 1145
Query: 723 EHAPELSANQTVNKDVDAQAEGEGSRPS-MDLFRAIFASSSDEKSSSSEDEQGDSEDDQ- 780
+ +T K VD E + S +++ + S + +E E D+
Sbjct: 1146 KR-----KRKTEEKGVDKDFESSSMKISKLEVTEIVKPSPKRKMEPDTEKMDRTPEKDKI 1200
Query: 781 ---AGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQI 824
A + + +G T ++++ P+ + S +++ ++
Sbjct: 1201 SLSAPAKKIKLNRETGKKIGSTENISNTKEPSEKLESTSSKVKQEKV 1247
Score = 34.7 bits (78), Expect = 0.42
Identities = 71/344 (20%), Positives = 125/344 (36%), Gaps = 55/344 (15%)
Query: 558 YASSHSTLSSRFTHAKEEDDSDQVEVPRDQENDVGDKQSAVKMKMFGKLTRDTFEWHPDK 617
Y S+ ST S ++E+ D+ + + +E + + A + + ++ + +W D
Sbjct: 1268 YTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQS--KWDKDD 1325
Query: 618 LLCKRFNVPDPYPDSTLVGLPR--VKRDKYSVFNFLTLPETASLPTTQASSEKVSQHRGP 675
+ +V P S+ VG P +K N + PE S P SEK+
Sbjct: 1326 FESEEEDVKSTQPISS-VGKPASVIKNVSTKPSNIVKYPEKESEP-----SEKIQ----- 1374
Query: 676 DKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTVN 735
K K + +HE K S A S+ K + ++ KE + S
Sbjct: 1375 -KFTKDVSHEIIQHEVKSSKNS-----ASSEKGKTKDRDYSVLEKENPEKRKNSTQPEKE 1428
Query: 736 KDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTD 795
++D E +G+ F+++ SS + ++S D S + N D D
Sbjct: 1429 SNLDRLNE-QGN------FKSLSQSSKEARTSDKHDSTRASSNKDF---TPNRDKKTDYD 1478
Query: 796 LGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHK 855
E SS + DE+ E R P+ + QK K +
Sbjct: 1479 TREYSS-------------------SKRRDEKNELTRRKDS---PSRNKDSASGQKNKPR 1516
Query: 856 KNKD-KHKAKKEHRRKKEKKKKHRK-HKHKGKQKNKKPEKSSSS 897
+ +D K + ++ + RK H HK K+P + + S
Sbjct: 1517 EERDLPKKGTGDSKKSNSSPSRDRKPHDHKATYDTKRPNEETKS 1560
Score = 30.4 bits (67), Expect = 8.0
Identities = 39/239 (16%), Positives = 88/239 (36%), Gaps = 20/239 (8%)
Query: 682 SRWDTSKHEKKEDSI--SEFLSLARSKAEPPKQQS---SPLVNKEEEHAPELSANQTVNK 736
S+WD E +E+ + ++ +S A K S S +V E+ + Q K
Sbjct: 1319 SKWDKDDFESEEEDVKSTQPISSVGKPASVIKNVSTKPSNIVKYPEKESEPSEKIQKFTK 1378
Query: 737 DVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTDL 796
DV + + S + S+S EK + + + E + + + Q ++++L
Sbjct: 1379 DVSHEIIQHEVKSSKN-------SASSEKGKTKDRDYSVLEKENPEKRKNSTQPEKESNL 1431
Query: 797 GETSSVAH--ALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKH 854
+ + +L + +E S + ++F P + + + +
Sbjct: 1432 DRLNEQGNFKSLSQSSKEARTSDKHDSTRASSNKDFTPNR------DKKTDYDTREYSSS 1485
Query: 855 KKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDEETAD 913
K+ +K++ + K K+K +++ P+K + +S D + D
Sbjct: 1486 KRRDEKNELTRRKDSPSRNKDSASGQKNKPREERDLPKKGTGDSKKSNSSPSRDRKPHD 1544
>gi|239752449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 52.0 bits (123), Expect = 3e-06
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 850 QKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSD 901
+K+K KK K K K KK+ ++KK+KKKK RK K K K+K KK K ++ +
Sbjct: 113 KKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGN 164
Score = 52.0 bits (123), Expect = 3e-06
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 850 QKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESS 900
+K+K KK K K K KK+ ++KK+K+K+ RK K K K+K KK +K + +E +
Sbjct: 117 KKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNEGA 167
Score = 51.6 bits (122), Expect = 3e-06
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 843 RQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDS 902
R+ + +KEK KK K K K KK+ ++KK+KKKK +K K K K+K K+ K +
Sbjct: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
Query: 903 SDSQ 906
+ ++
Sbjct: 162 TGNE 165
Score = 51.2 bits (121), Expect = 4e-06
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 844 QTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEK 893
Q E +KEK KK K K K KK+ ++KK+KKKK +K K K K+K K+ K
Sbjct: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRK 150
Score = 50.4 bits (119), Expect = 7e-06
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 850 QKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDE 909
+KEK K+ K K K KK+ ++KK+KKKK +K K K K+K K+ K + ++
Sbjct: 105 KKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGN 164
Query: 910 ETADV 914
E A +
Sbjct: 165 EGAKI 169
Score = 48.5 bits (114), Expect = 3e-05
Identities = 23/46 (50%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 848 VPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEK 893
+PQ+E+ KK K+K K KK+ ++KK+KKKK +K K K K+K KK ++
Sbjct: 99 LPQREE-KKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKR 143
Score = 43.1 bits (100), Expect = 0.001
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 838 FCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEK 893
FC +A +L +P ++ + K K K++ ++KK+KKKK +K K K K+K KK +K
Sbjct: 85 FC-DAGPSLHLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKK 139
>gi|56090620 NFKB activating protein-like [Homo sapiens]
Length = 402
Score = 52.0 bits (123), Expect = 3e-06
Identities = 57/232 (24%), Positives = 87/232 (37%), Gaps = 27/232 (11%)
Query: 687 SKHEKKEDSISEFLSLARSKAEPPKQQS--SPLVNKEEEHAPELSANQTVNKDVDAQA-- 742
S+ ED + S PP QS S H+ + ++D A
Sbjct: 5 SRSSYSEDIVGSRRRRRSSSGSPPSPQSRCSSWDGCSRSHSRGREGLRPPWSELDVGALY 64
Query: 743 --EGEGSRPSMDLFRAI-FASS-SDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTDLGE 798
GSR + FR FASS S S +E+ Q+ +S + L E
Sbjct: 65 PFSRSGSRGRLPRFRNYAFASSWSTSYSGYRYHRHCYAEERQSAEDYEKEESHRQRRLKE 124
Query: 799 TSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHKKNK 858
+ P P P FP Q+D E +E ++ H+K+
Sbjct: 125 RERIGELGAPEVWGPSPKFP----QLDSDEH--------------TPVEDEEEVTHQKSS 166
Query: 859 DKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDEE 910
+EHR+KK + +++K K K K +K K S S+S+ SD+ SD +
Sbjct: 167 SSDSNSEEHRKKKTSRSRNKK-KRKNKSSKRKHRKYSDSDSNSESDTNSDSD 217
>gi|168229156 NFKB activating protein [Homo sapiens]
Length = 415
Score = 51.6 bits (122), Expect = 3e-06
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 23/83 (27%)
Query: 851 KEKHKKNKDKHKAKKEH-----------------------RRKKEKKKKHRKHKHKGKQK 887
KE+ KK + K +K++H RR K+ KKK +K KH+ K+
Sbjct: 190 KERSKKRRKKKSSKRKHKKYSEDSDSDSDSETDSSDEDNKRRAKKAKKKEKKKKHRSKKY 249
Query: 888 NKKPEKSSSSESSDSSDSQSDEE 910
KK K S ESSDSS +S EE
Sbjct: 250 KKKRSKKSRKESSDSSSKESQEE 272
Score = 43.5 bits (101), Expect = 0.001
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 850 QKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDE 909
+ E+ KK+ +E ++KK + K R K + K+ +K+ K S +S SDS++D
Sbjct: 164 EDEEPKKSTTSASTSEEEKKKKSSRSKERSKKRRKKKSSKRKHKKYSEDSDSDSDSETDS 223
Query: 910 ETAD 913
D
Sbjct: 224 SDED 227
Score = 43.5 bits (101), Expect = 0.001
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 847 EVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQ 906
E P+K + + + KK+ R KE+ KK RK K K+K+KK + S S+S +DS
Sbjct: 166 EEPKKSTTSASTSEEEKKKKSSRSKERSKKRRK-KKSSKRKHKKYSEDSDSDSDSETDS- 223
Query: 907 SDEE 910
SDE+
Sbjct: 224 SDED 227
Score = 39.7 bits (91), Expect = 0.013
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 843 RQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDS 902
+ T E+ KK K ++ + R KK +KKK K KHK K + S S +DS
Sbjct: 170 KSTTSASTSEEEKKKKS---SRSKERSKKRRKKKSSKRKHK---KYSEDSDSDSDSETDS 223
Query: 903 SDSQSDEETADVSPQELLRRLKSLPLRRQ 931
SD + +E ++ +S +++
Sbjct: 224 SDEDNKRRAKKAKKKEKKKKHRSKKYKKK 252
Score = 33.5 bits (75), Expect = 0.95
Identities = 49/241 (20%), Positives = 86/241 (35%), Gaps = 50/241 (20%)
Query: 664 ASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEEE 723
+SS + P S KP W + +++E+S+ R K +++ L
Sbjct: 96 SSSVYYGSYSRPYGSDKP--WPSLLDKEREESL-------RQKRLSERERIGEL------ 140
Query: 724 HAPELSANQTVNK--DVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQA 781
APE+ N D D E P A + +K SS E+ +
Sbjct: 141 GAPEVWGLSPKNPEPDSDEHTPVEDEEPKKSTTSASTSEEEKKKKSSRSKERSKKRRKKK 200
Query: 782 GSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPN 841
S + + S+D+D S + D +E N
Sbjct: 201 SSKRKHKKYSEDSDSDSDS----------------------ETDSSDE----------DN 228
Query: 842 ARQTLEVPQKEKHKKNKDK-HKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESS 900
R+ + +KEK KK++ K +K K+ + +KE K + +N +++ + E S
Sbjct: 229 KRRAKKAKKKEKKKKHRSKKYKKKRSKKSRKESSDSSSKESQEEFLENPWKDRTKAEEPS 288
Query: 901 D 901
D
Sbjct: 289 D 289
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 51.6 bits (122), Expect = 3e-06
Identities = 51/250 (20%), Positives = 104/250 (41%), Gaps = 19/250 (7%)
Query: 662 TQASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKE 721
+ + S+K S + G + + SK +K S + S++ S+ E + S +
Sbjct: 142 SDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSD 201
Query: 722 EEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQA 781
++ PE K +A G +A AS SD K+ S + ++
Sbjct: 202 QDFTPE--------KKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARS 253
Query: 782 GSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPN 841
S ++ SS D+D+ P P P+ K + + + P PP +
Sbjct: 254 ASSSSSSSSSSDSDVSVKK-------PPRGRKPAEKPLPKPRGRKPK---PERPPSSSSS 303
Query: 842 ARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGK-QKNKKPEKSSSSESS 900
+ EV + + K+ + + + E RR++E++++ R+ + + K +K ++ E++ E+
Sbjct: 304 DSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRGEAE 363
Query: 901 DSSDSQSDEE 910
S S +E
Sbjct: 364 RGSGGSSGDE 373
Score = 33.5 bits (75), Expect = 0.95
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 694 DSISEFLSLARSKAEPPKQQSSPLVNK---EEEHAPELSANQTVNKDVDAQAEGEGSRPS 750
+ +E + +S+ PK ++ VNK E+E A E A + + + Q + E +PS
Sbjct: 537 EKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAE-DKPS 595
Query: 751 MDLFRAIFASSSDEKSSSSED---EQG-DSED-DQAGSGE 785
DL + ++ +K S+ED E+G DSE+ + GS E
Sbjct: 596 TDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSE 635
Score = 33.1 bits (74), Expect = 1.2
Identities = 68/330 (20%), Positives = 108/330 (32%), Gaps = 50/330 (15%)
Query: 631 DSTLVGLPRVKRDKYSVFNFLTLPETASLPTTQASSEKVSQHRGPDKSRKPSRWDTSKHE 690
D G + +KY +F F T ETA L + + DK KP+ K +
Sbjct: 26 DDIADGAVKPPPNKYPIFFFGT-HETAFL----GPKDLFPYDKCKDKYGKPN-----KRK 75
Query: 691 KKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTVNKDVDAQAEGEGSRPS 750
+ + E + + P P V+ + APE AN D D E G
Sbjct: 76 GFNEGLWEIQNNPHASYSAP-----PPVSSSDSEAPE--ANPADGSDADEDDEDRG---- 124
Query: 751 MDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTDLGETSSVAHALVPAP 810
+ A+ A+++ ++ S D S++ + S + SS +P
Sbjct: 125 VMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSP 184
Query: 811 QEPPPSFPIQKMQIDEREEFGP------RLPPVFCPNARQTLEVPQKEKHKKNKDKHKAK 864
E S + + ++F P R P R+ + P D AK
Sbjct: 185 SEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAK 244
Query: 865 KEH-----------------------RRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSD 901
E ++ +K K K + + KPE+ SS SSD
Sbjct: 245 PEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSD 304
Query: 902 SSDSQSDEETADVSPQELLRRLKSLPLRRQ 931
S + D + E RR RR+
Sbjct: 305 SDSDEVDRISEWKRRDEARRRELEARRRRE 334
>gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
Length = 670
Score = 51.6 bits (122), Expect = 3e-06
Identities = 51/250 (20%), Positives = 104/250 (41%), Gaps = 19/250 (7%)
Query: 662 TQASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKE 721
+ + S+K S + G + + SK +K S + S++ S+ E + S +
Sbjct: 142 SDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSPSEEENSESSSESEKTSD 201
Query: 722 EEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQA 781
++ PE K +A G +A AS SD K+ S + ++
Sbjct: 202 QDFTPE--------KKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARS 253
Query: 782 GSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPN 841
S ++ SS D+D+ P P P+ K + + + P PP +
Sbjct: 254 ASSSSSSSSSSDSDVSVKK-------PPRGRKPAEKPLPKPRGRKPK---PERPPSSSSS 303
Query: 842 ARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGK-QKNKKPEKSSSSESS 900
+ EV + + K+ + + + E RR++E++++ R+ + + K +K ++ E++ E+
Sbjct: 304 DSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRGEAE 363
Query: 901 DSSDSQSDEE 910
S S +E
Sbjct: 364 RGSGGSSGDE 373
Score = 34.7 bits (78), Expect = 0.42
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Query: 694 DSISEFLSLARSKAEPPKQQSSPLVNK---EEEHAPELSANQTVNKDVDAQAEGEGSRPS 750
+ +E + +S+ PK ++ VNK E+E A E A + + + Q + E +PS
Sbjct: 537 EKAAEVYTRLKSRVLGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAE-DKPS 595
Query: 751 MDLFRAIFASSSDEKSSSSED---EQG-DSED-DQAGSGEANFQSSQDTDLGETSS 801
DL + ++ +K S+ED E+G DSE+ + GS E + DL S
Sbjct: 596 TDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPRCGSSEDLHDVREGPDLDRPGS 651
Score = 33.1 bits (74), Expect = 1.2
Identities = 68/330 (20%), Positives = 108/330 (32%), Gaps = 50/330 (15%)
Query: 631 DSTLVGLPRVKRDKYSVFNFLTLPETASLPTTQASSEKVSQHRGPDKSRKPSRWDTSKHE 690
D G + +KY +F F T ETA L + + DK KP+ K +
Sbjct: 26 DDIADGAVKPPPNKYPIFFFGT-HETAFL----GPKDLFPYDKCKDKYGKPN-----KRK 75
Query: 691 KKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTVNKDVDAQAEGEGSRPS 750
+ + E + + P P V+ + APE AN D D E G
Sbjct: 76 GFNEGLWEIQNNPHASYSAP-----PPVSSSDSEAPE--ANPADGSDADEDDEDRG---- 124
Query: 751 MDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTDLGETSSVAHALVPAP 810
+ A+ A+++ ++ S D S++ + S + SS +P
Sbjct: 125 VMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKTPALKMSVSKRARKASSDLDQASVSP 184
Query: 811 QEPPPSFPIQKMQIDEREEFGP------RLPPVFCPNARQTLEVPQKEKHKKNKDKHKAK 864
E S + + ++F P R P R+ + P D AK
Sbjct: 185 SEEENSESSSESEKTSDQDFTPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSDGAK 244
Query: 865 KEH-----------------------RRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSD 901
E ++ +K K K + + KPE+ SS SSD
Sbjct: 245 PEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSSSSD 304
Query: 902 SSDSQSDEETADVSPQELLRRLKSLPLRRQ 931
S + D + E RR RR+
Sbjct: 305 SDSDEVDRISEWKRRDEARRRELEARRRRE 334
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 51.2 bits (121), Expect = 4e-06
Identities = 59/261 (22%), Positives = 114/261 (43%), Gaps = 41/261 (15%)
Query: 684 WDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTVNKDVDAQAE 743
WD S EK+ + + LAR + + + ++NKEE+ E S + +V E
Sbjct: 2123 WDFS--EKRSELTKDEKKLARKQRKLANKMRR-MINKEEKMTEEESKLARKHSEVILDDE 2179
Query: 744 GEGSRPSMDLFRAI---FASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTDLGETS 800
EG ++ + + + K E+ S+ D+ S E +F ++ L E
Sbjct: 2180 EEGGIEEEEVIPFLKRRWRKRKEAKRGDKPKEKFSSQVDEVES-EEHFSEEMESLLDELE 2238
Query: 801 SVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHKKNKD- 859
QE + + +EREE R+ EV ++E+ +K ++
Sbjct: 2239 K---------QES-----LSSEEEEEREE----------EEEREEEEVREEEEERKEEEE 2274
Query: 860 ---KHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDS-SDSQSDEETADVS 915
K K+E +KK+KK+K ++ + ++ ++ E+ S E ++S SD + +EE+ +
Sbjct: 2275 GEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLE 2334
Query: 916 PQ-----ELLRRLKSLPLRRQ 931
+ E+L++ K L+ Q
Sbjct: 2335 EEVDREKEILKKEKQFKLQEQ 2355
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 51.2 bits (121), Expect = 4e-06
Identities = 78/362 (21%), Positives = 150/362 (41%), Gaps = 27/362 (7%)
Query: 573 KEEDDSDQVEVPRDQENDVGDKQSAVKMKMFGKLTRDTFEWHPDKLLCKRFNVPDPYPDS 632
++E D ++ E + + +K+S +K K K+ R TFE K+ + + D S
Sbjct: 780 EKEIDIEKQEKHIKESKEKPEKRSQIKEKDIEKMERKTFE-KEKKIKHEHKSEKDKLDLS 838
Query: 633 TLVGLPRVKRDKYSVFNFLTLPE------TASLPTT---QASSEKVSQHRGPDKSRKPSR 683
V + K YS E TA++ T + S EK+ + +K K
Sbjct: 839 ECVDKIKEKDKLYSHHTEKCHKEGEKSKNTAAIKKTDDREKSREKMDRKHDKEKPEKERH 898
Query: 684 WDTSKHE---KKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTVNKDVDA 740
SK + +K++ S+ ++S+ K++ L KE+ E S N T +K +
Sbjct: 899 LAESKEKHLMEKKNKQSDNSEYSKSEKGKNKEKDRELDKKEKSRDKE-SINITNSKHIQE 957
Query: 741 QAEG---EGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTDLG 797
+ + +G++ + ++ + DE + + ++ D +D + + + D
Sbjct: 958 EKKSSIVDGNKAQHEKPLSLKEKTKDEPLKTPDGKEKDKKDKDIDRYK---ERDKHKDKI 1014
Query: 798 ETSSVAHALVPAPQEPPPSFPIQK-MQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHKK 856
+ +S+ A + P S P K + E+ L ++ ++ HKK
Sbjct: 1015 QINSLLKLKSEADKPKPKSSPASKDTRPKEKRLVNDDLMQTSFERMLSLKDLEIEQWHKK 1074
Query: 857 NKDKHKAKKEHRRKKE-----KKKKHRKHKHKGKQ-KNKKPEKSSSSESSDSSDSQSDEE 910
+K+K K K++ R + K K K KH + KNK+ +S SSE +D+ + +
Sbjct: 1075 HKEKIKQKEKERLRNRNCLELKIKDKEKTKHTPTESKNKELTRSKSSEVTDAYTKEKQPK 1134
Query: 911 TA 912
A
Sbjct: 1135 DA 1136
Score = 35.4 bits (80), Expect = 0.25
Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 27/184 (14%)
Query: 741 QAEGEGSRP-------SMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQD 793
QA G RP ++L SD+ S ++ E+ S + + + ++ +D
Sbjct: 256 QANKHGERPVDVAETEELELLLKREVPLSDDDESYTDSEEAQSVNPSSVDENIDSETEKD 315
Query: 794 TDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEK 853
+ + E+ + + P P + + + D+ EE + + +KE+
Sbjct: 316 SLICESKQILPSKTPLPS----ALDEYEFKDDDDEEINKMI---------DDRHILRKEQ 362
Query: 854 HKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEK--SSSSESSDSSDSQSDEET 911
K+N+ + A+K H K++K + K K K +KP + SS+ESSD Q+ + +
Sbjct: 363 RKENEPE--AEKTHLFAKQEKAFYPK---SFKSKKQKPSRVLYSSTESSDEEALQNKKIS 417
Query: 912 ADVS 915
S
Sbjct: 418 TSCS 421
Score = 32.3 bits (72), Expect = 2.1
Identities = 62/276 (22%), Positives = 101/276 (36%), Gaps = 34/276 (12%)
Query: 654 PETASLPTTQASSEKVSQHRGPDKSRK--PSRWDTSKHEKKEDSISEFLSLARSKAEPPK 711
P +T++S E+ Q++ S P ++ KKE +S K
Sbjct: 395 PSRVLYSSTESSDEEALQNKKISTSCSVIPETSNSDMQTKKEYVVSGEHKQKGKVKRKLK 454
Query: 712 QQSSPLVN---KEEEHAPELS--ANQTVNKDVDA----QAEGEGSRP-------SMDLFR 755
Q+ N K+E+ E + N TVN +D + EG + S+ LF
Sbjct: 455 NQNKNKENQELKQEKEGKENTRITNLTVNTGLDCSEKTREEGNFRKSFSPKDDTSLHLFH 514
Query: 756 AIFASSSDEKSSSSEDEQGDSEDDQA------GSGEANFQ-------SSQDTDLGETSSV 802
S SE + + + GS E + Q +++ L E+SSV
Sbjct: 515 ISTGKSPKHSCGLSEKQSTPLKQEHTKTCLSPGSSEMSLQPDLVRYDNTESEFLPESSSV 574
Query: 803 AHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHKKNKDKHK 862
+ F ++ + + P F N+ TL+ + +K K KHK
Sbjct: 575 KSCKHKEKSKHQKDFHLEFGEKSNAKIKDEDHSPTF-ENSDCTLK--KMDKEGKTLKKHK 631
Query: 863 AKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSE 898
K + R K++ KK+ K K K K+ E S E
Sbjct: 632 LKHKEREKEKHKKEIEGEKEKYKTKDSAKELQRSVE 667
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 51.2 bits (121), Expect = 4e-06
Identities = 78/362 (21%), Positives = 150/362 (41%), Gaps = 27/362 (7%)
Query: 573 KEEDDSDQVEVPRDQENDVGDKQSAVKMKMFGKLTRDTFEWHPDKLLCKRFNVPDPYPDS 632
++E D ++ E + + +K+S +K K K+ R TFE K+ + + D S
Sbjct: 803 EKEIDIEKQEKHIKESKEKPEKRSQIKEKDIEKMERKTFE-KEKKIKHEHKSEKDKLDLS 861
Query: 633 TLVGLPRVKRDKYSVFNFLTLPE------TASLPTT---QASSEKVSQHRGPDKSRKPSR 683
V + K YS E TA++ T + S EK+ + +K K
Sbjct: 862 ECVDKIKEKDKLYSHHTEKCHKEGEKSKNTAAIKKTDDREKSREKMDRKHDKEKPEKERH 921
Query: 684 WDTSKHE---KKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTVNKDVDA 740
SK + +K++ S+ ++S+ K++ L KE+ E S N T +K +
Sbjct: 922 LAESKEKHLMEKKNKQSDNSEYSKSEKGKNKEKDRELDKKEKSRDKE-SINITNSKHIQE 980
Query: 741 QAEG---EGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTDLG 797
+ + +G++ + ++ + DE + + ++ D +D + + + D
Sbjct: 981 EKKSSIVDGNKAQHEKPLSLKEKTKDEPLKTPDGKEKDKKDKDIDRYK---ERDKHKDKI 1037
Query: 798 ETSSVAHALVPAPQEPPPSFPIQK-MQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHKK 856
+ +S+ A + P S P K + E+ L ++ ++ HKK
Sbjct: 1038 QINSLLKLKSEADKPKPKSSPASKDTRPKEKRLVNDDLMQTSFERMLSLKDLEIEQWHKK 1097
Query: 857 NKDKHKAKKEHRRKKE-----KKKKHRKHKHKGKQ-KNKKPEKSSSSESSDSSDSQSDEE 910
+K+K K K++ R + K K K KH + KNK+ +S SSE +D+ + +
Sbjct: 1098 HKEKIKQKEKERLRNRNCLELKIKDKEKTKHTPTESKNKELTRSKSSEVTDAYTKEKQPK 1157
Query: 911 TA 912
A
Sbjct: 1158 DA 1159
Score = 35.4 bits (80), Expect = 0.25
Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 27/184 (14%)
Query: 741 QAEGEGSRP-------SMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQD 793
QA G RP ++L SD+ S ++ E+ S + + + ++ +D
Sbjct: 279 QANKHGERPVDVAETEELELLLKREVPLSDDDESYTDSEEAQSVNPSSVDENIDSETEKD 338
Query: 794 TDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEK 853
+ + E+ + + P P + + + D+ EE + + +KE+
Sbjct: 339 SLICESKQILPSKTPLPS----ALDEYEFKDDDDEEINKMI---------DDRHILRKEQ 385
Query: 854 HKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEK--SSSSESSDSSDSQSDEET 911
K+N+ + A+K H K++K + K K K +KP + SS+ESSD Q+ + +
Sbjct: 386 RKENEPE--AEKTHLFAKQEKAFYPK---SFKSKKQKPSRVLYSSTESSDEEALQNKKIS 440
Query: 912 ADVS 915
S
Sbjct: 441 TSCS 444
Score = 32.3 bits (72), Expect = 2.1
Identities = 62/276 (22%), Positives = 101/276 (36%), Gaps = 34/276 (12%)
Query: 654 PETASLPTTQASSEKVSQHRGPDKSRK--PSRWDTSKHEKKEDSISEFLSLARSKAEPPK 711
P +T++S E+ Q++ S P ++ KKE +S K
Sbjct: 418 PSRVLYSSTESSDEEALQNKKISTSCSVIPETSNSDMQTKKEYVVSGEHKQKGKVKRKLK 477
Query: 712 QQSSPLVN---KEEEHAPELS--ANQTVNKDVDA----QAEGEGSRP-------SMDLFR 755
Q+ N K+E+ E + N TVN +D + EG + S+ LF
Sbjct: 478 NQNKNKENQELKQEKEGKENTRITNLTVNTGLDCSEKTREEGNFRKSFSPKDDTSLHLFH 537
Query: 756 AIFASSSDEKSSSSEDEQGDSEDDQA------GSGEANFQ-------SSQDTDLGETSSV 802
S SE + + + GS E + Q +++ L E+SSV
Sbjct: 538 ISTGKSPKHSCGLSEKQSTPLKQEHTKTCLSPGSSEMSLQPDLVRYDNTESEFLPESSSV 597
Query: 803 AHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHKKNKDKHK 862
+ F ++ + + P F N+ TL+ + +K K KHK
Sbjct: 598 KSCKHKEKSKHQKDFHLEFGEKSNAKIKDEDHSPTF-ENSDCTLK--KMDKEGKTLKKHK 654
Query: 863 AKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSE 898
K + R K++ KK+ K K K K+ E S E
Sbjct: 655 LKHKEREKEKHKKEIEGEKEKYKTKDSAKELQRSVE 690
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 50.8 bits (120), Expect = 6e-06
Identities = 51/244 (20%), Positives = 92/244 (37%), Gaps = 17/244 (6%)
Query: 675 PDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTV 734
P+K++ P + + EK + + E + ++ SP+ KEEE E+ +
Sbjct: 782 PEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPV--KEEEKPQEVKVKEPP 839
Query: 735 NKDVDAQAEGEG-SRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQD 793
K + +A + D + K E ++ E + EA + ++D
Sbjct: 840 KKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAED 899
Query: 794 ---TDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQ 850
E + A V +P + K + D+ + P P E +
Sbjct: 900 KKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPA----------EKKE 949
Query: 851 KEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNK-KPEKSSSSESSDSSDSQSDE 909
KK+ + KAKK + K + K K K+ +K K EK+ S S+D DS+ E
Sbjct: 950 AAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPE 1009
Query: 910 ETAD 913
+ +
Sbjct: 1010 KATE 1013
Score = 49.7 bits (117), Expect = 1e-05
Identities = 57/265 (21%), Positives = 113/265 (42%), Gaps = 16/265 (6%)
Query: 655 ETASLPTTQASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQS 714
E A+ P +A S + + P +++ P + + +K + S + S A+ +A+ P +
Sbjct: 507 EEAASPEKEAKSPVKEEAKSPAEAKSPEK-EEAKSPAEVKSPEKAKSPAKEEAKSPPEAK 565
Query: 715 SPLVNKEEEHAP-ELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQ 773
SP KEE +P E+ + + +A+ S + ++ +E S +E +
Sbjct: 566 SP--EKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKS---PVKEEAKSPAEAKS 620
Query: 774 GDSEDDQAGSGEANFQSSQDTDLGETSSVAHALVPAPQEPP-PSFPIQKMQIDEREEFGP 832
E+ ++ + + + ++ E S A P +E P ++ + +
Sbjct: 621 PVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKA 680
Query: 833 RLPPVFCPNARQTLEVPQKEKHK-----KNKDKHKAKKEHRRK---KEKKKKHRKHKHKG 884
+ P + + + P KE+ K K+ K +AK + K KE+ K K K
Sbjct: 681 KSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPV 740
Query: 885 KQKNKKPEKSSSSESSDSSDSQSDE 909
K++ K PEK+ S E + + D +S E
Sbjct: 741 KEEAKSPEKAKSPEKAKTLDVKSPE 765
Score = 46.2 bits (108), Expect = 1e-04
Identities = 59/283 (20%), Positives = 118/283 (41%), Gaps = 28/283 (9%)
Query: 654 PETASLPTTQ-------ASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSIS-------EF 699
PE A PT + A S + + + P+K++ P + + EK + + +
Sbjct: 635 PEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKA 694
Query: 700 LSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFA 759
S + +A+ P++ SP+ KEE +PE A V ++ A+ + P + ++
Sbjct: 695 KSPVKEEAKSPEKAKSPV--KEEAKSPE-KAKSPVKEE--AKTPEKAKSPVKEEAKSPEK 749
Query: 760 SSSDEKSSSSEDEQGDSED---DQAGSGEANFQSSQDTDLGE-TSSVAHALVPAPQEPPP 815
+ S EK+ + + + +++ ++A S F + + E S A P ++
Sbjct: 750 AKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKA 809
Query: 816 SFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKK 875
+ +I ++EE + P + E P+K + +K K +++ KKE+
Sbjct: 810 P----EKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAP 865
Query: 876 KHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDEETADVSPQE 918
K K K ++K K+P ES + + E+ V E
Sbjct: 866 KKEAPKPKVEEK-KEPAVEKPKESKVEAKKEEAEDKKKVPTPE 907
Score = 45.4 bits (106), Expect = 2e-04
Identities = 64/277 (23%), Positives = 117/277 (42%), Gaps = 27/277 (9%)
Query: 655 ETASLPTTQASSEKV-----SQHRGPDKSRKPSRWDT-SKHEKKEDSISEFLSLARSKAE 708
E A P S EK ++ + P+K++ P++ + S E K E S A K+
Sbjct: 522 EEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKS- 580
Query: 709 PPKQQSSPLVNKEEEHAP-ELSANQTVNKDV--DAQAEGEGSRPSMDLFRAIFASSSDEK 765
P++ SP KEE +P E + + V +A++ E P + ++ S EK
Sbjct: 581 -PEKAKSPA--KEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEK 637
Query: 766 SSSSEDEQGDSEDDQAGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQID 825
+ S E+ S + +A S E + ++ + ++ A A P + P ++ +
Sbjct: 638 AKSPTKEEAKSPE-KAKSPEK--EEAKSPEKAKSPVKAEAKSPEKAKSP-------VKAE 687
Query: 826 EREEFGPRLPPVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGK 885
+ + P + + + P KE+ K + KE + EK K K + K
Sbjct: 688 AKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSP 747
Query: 886 QKNKKPEKSSSSE-SSDSSDSQSDEET---ADVSPQE 918
+K K PEK+ + + S + + + EE AD P++
Sbjct: 748 EKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEK 784
Score = 31.6 bits (70), Expect = 3.6
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 844 QTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSS---SESS 900
+T P +E K+ KE + + K K + K + K PEK+ S E+
Sbjct: 500 ETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAK 559
Query: 901 DSSDSQSDEETADVSPQEL 919
+++S E+ SP E+
Sbjct: 560 SPPEAKSPEKEEAKSPAEV 578
>gi|117553580 adaptor-related protein complex 3, delta 1 subunit
isoform 2 [Homo sapiens]
Length = 1153
Score = 50.4 bits (119), Expect = 7e-06
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 709 PPKQQSSPLVNKEEE--HAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKS 766
P S V EEE H +L ++ K + + +G+ S+ + SDE
Sbjct: 716 PGLPMSDQYVKLEEERRHRQKLEKDKRRKKRKEKEKKGKRRHSSLP-------TESDEDI 768
Query: 767 SSSEDEQGDSEDDQAGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDE 826
+ ++ +E+ + ++ D D + + P PIQK + E
Sbjct: 769 APAQQVDIVTEEMPENALPSD---EDDKDPNDPYRALDIDLDKPLADSEKLPIQKHRNTE 825
Query: 827 REEFGPRLPPVFCPNARQTLEVPQKEKHK-KNKDKHKAKKEHRRKKEKKKKHRKHKH--- 882
+ + P+ +++ + +K K K ++K+K K K++ + K KKKKHRK K
Sbjct: 826 TSKSPEKDVPMVEKKSKKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEKEERT 885
Query: 883 KGKQKNKKPEKSSSSESSDSSDSQSDEE 910
KGK+K+KK S + + + + EE
Sbjct: 886 KGKKKSKKQPPGSEEAAGEPVQNGAPEE 913
Score = 46.2 bits (108), Expect = 1e-04
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Query: 791 SQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQID-EREEFGPRLPPVFCPNARQTLEVP 849
+Q D+ +AL + P+ P + + ID ++ P+ +T + P
Sbjct: 771 AQQVDIVTEEMPENALPSDEDDKDPNDPYRALDIDLDKPLADSEKLPIQKHRNTETSKSP 830
Query: 850 QKE---------KHKKNKDKHKAK---KEHRRKKEKKK--KHRKHKHKGKQKNKKPEKSS 895
+K+ K KK + KHK K KE +++KEKKK K +K KH+ +++ + K
Sbjct: 831 EKDVPMVEKKSKKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEKEERTKGKKK 890
Query: 896 SSESSDSSDSQSDEETADVSPQE 918
S + S+ + E + +P+E
Sbjct: 891 SKKQPPGSEEAAGEPVQNGAPEE 913
Score = 33.1 bits (74), Expect = 1.2
Identities = 51/238 (21%), Positives = 98/238 (41%), Gaps = 44/238 (18%)
Query: 715 SPLVNKEEEHAPE---LSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSED 771
+P+ K ++ P L + +N+ + + +E E RP RA+F +
Sbjct: 605 NPVAPKAQKKVPVPEGLDLDAWINEPL-SDSESEDERP-----RAVFHEEEQRRPKHRPS 658
Query: 772 EQGDSEDDQAGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFP----IQKMQIDER 827
E E++ A EA Q + SS P+PQ+ P I +QID
Sbjct: 659 EA--DEEELARRREARKQEQANNPFYIKSS------PSPQKRYQDTPGVEHIPVVQIDLS 710
Query: 828 EEFGPRLPPVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKK-HRKHKHKGKQ 886
++P + P + Q +++ ++ +H++ +K K +K ++KEK+KK R+H +
Sbjct: 711 VPL--KVPGL--PMSDQYVKLEEERRHRQKLEKDKRRK---KRKEKEKKGKRRHSSLPTE 763
Query: 887 KN--------------KKPEKSSSSESSDSSDSQSDEETADVSPQELLRRLKSLPLRR 930
+ + PE + S+ D D D+ + L + LP+++
Sbjct: 764 SDEDIAPAQQVDIVTEEMPENALPSD-EDDKDPNDPYRALDIDLDKPLADSEKLPIQK 820
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 50.4 bits (119), Expect = 7e-06
Identities = 57/298 (19%), Positives = 112/298 (37%), Gaps = 54/298 (18%)
Query: 655 ETASLPTTQASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQS 714
ET LP + + +E++ D + D KH + I E S +E
Sbjct: 124 ETRKLPGSDSENEELLNGHASDSENE----DVGKHPASDSEIEELQKSPASDSETEDALK 179
Query: 715 SPLVNKEEEHAPELSANQTVNKDV------DAQAEGEGSRPSMDLFRAIFASSSDEKSSS 768
+ + E E P A+ + N++ D+++E E +P + S E
Sbjct: 180 PQISDSESEEPPRHQASDSENEEPPKPRMSDSESE-ELPKPQV---------SDSESEEP 229
Query: 769 SEDEQGDSEDDQAGSGEANFQSSQDTDLGETSSVAHALVPAPQ------EPPP------- 815
+ DSE+++ + S+D + S + +P P+ E PP
Sbjct: 230 PRHQASDSENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDSESEDPPRNQASDS 289
Query: 816 -SFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQK-----EKHKKNK----------- 858
+ + K ++ + E GP+ P QK + ++NK
Sbjct: 290 ENEELPKPRVSDSESEGPQKGPASDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSF 349
Query: 859 --DKHKAKKEHRRKKEKKKKHRKHKHKGKQKNK--KPEKSSSSESSDSSDSQSDEETA 912
D H +K+ ++++H+K K + K + EK + +++ SDS+ +E+ +
Sbjct: 350 HSDSHMDRKKFHSSDSEEEEHKKQKMDSDEDEKEGEEEKVAKRKAAVLSDSEDEEKAS 407
Score = 43.1 bits (100), Expect = 0.001
Identities = 62/289 (21%), Positives = 102/289 (35%), Gaps = 70/289 (24%)
Query: 655 ETASLPTTQASSEKVSQHRGPDKSRKPSRWDTSKHEKKE-------DSISEFLSLARSKA 707
E+ LP Q S + S +P R S E +E DS SE
Sbjct: 212 ESEELPKPQVSDSE---------SEEPPRHQASDSENEELPKPRISDSESE--------- 253
Query: 708 EPPKQQSSPLVNKE----------EEHAPELSANQTVNKDV------DAQAEGEGSRPSM 751
+PP+ Q+S N+E E P A+ + N+++ D+++EG P
Sbjct: 254 DPPRHQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVSDSESEGPQKGP-- 311
Query: 752 DLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTDLGETSSVAHALVPAPQ 811
AS S+ + +S ++ +S+DD + Q+ S + +
Sbjct: 312 -------ASDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKFHSSD 364
Query: 812 EPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKK 871
QKM DE E+ G ++EK K K + E K
Sbjct: 365 SEEEEHKKQKMDSDEDEKEG------------------EEEKVAKRKAAVLSDSEDEEKA 406
Query: 872 EKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSD--EETADVSPQE 918
KK + +KS E + +SDS+ + +E +D +E
Sbjct: 407 SAKKSRVVSDADDSDSDAVSDKSGKREKTIASDSEEEAGKELSDKKNEE 455
Score = 34.3 bits (77), Expect = 0.55
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 12/118 (10%)
Query: 678 SRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTVNKD 737
S K SR + + D++S+ + K++ + + EEE ELS + KD
Sbjct: 407 SAKKSRVVSDADDSDSDAVSD---------KSGKREKTIASDSEEEAGKELSDKKNEEKD 457
Query: 738 VDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTD 795
+ ++ E +L IF S DE+ E + ED + GE + ++D+D
Sbjct: 458 LFG-SDSESGNEEENLIADIFGESGDEE--EEEFTGFNQEDLEEEKGETQVKEAEDSD 512
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 50.1 bits (118), Expect = 1e-05
Identities = 87/451 (19%), Positives = 176/451 (39%), Gaps = 31/451 (6%)
Query: 382 AATSENSHLLQVLSESAGKATPDPGTHSKHQLNASKRAELLGET-PIQGSATSVLEFLSQ 440
A E+ +++ ++ +A P S H+ SK+++ ET P ++ +V + SQ
Sbjct: 139 ATNPESKQIVEEKTKRQNEADKTP-LKSSHENEQSKKSKSSSETNPESQNSKTVSKNCSQ 197
Query: 441 KDKERIKEMKQA-TDLKAAQLKARSLAQNAQSSRAQLSPAAAAGHCSWNMALGGGTATLK 499
KDK+ K K+ T+ + + + +++S +S + + + + G + +
Sbjct: 198 KDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISEICSENSLNVDFLMLVGQSDDE 257
Query: 500 ASNFKPFAKDPEKQKRYDEFLVHMKQGQKDALERCLDPSMTEWERGRERDEFARAALLYA 559
+ NF + ++ + + L + K +KD + S E E ++ + ++
Sbjct: 258 SINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKK----V 313
Query: 560 SSHSTLSSRFTHAKEEDDSDQVEVPRDQENDVGDKQSAVKMKMFGKLTRDTFEWHPDKLL 619
+ + K++ +S E ++ K+ K+K K +DT + +P+
Sbjct: 314 KKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDK-KKDT-KKYPESTD 371
Query: 620 CKRFNVPDPYPDSTLVGLPRVKRDKYSVFNFLTLPETASLPTTQASSEKVSQHRGPD--K 677
+ + D DS + DK +T +T + SE S+ D K
Sbjct: 372 TESGDAKDARNDSRNLKKASKNDDKKKDAKKITF-------STDSESELESKESQKDEKK 424
Query: 678 SRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTVNKD 737
+K S+ D K K ++ ++ A+ + S K+E+ + S KD
Sbjct: 425 DKKDSKTDNKKSVKNDEESTD--------ADSEPKGDSKKGKKDEKKGKKDSKKDDKKKD 476
Query: 738 VDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTDLG 797
AE ++L + S EK S +D + D+ D S +A F S T
Sbjct: 477 AKKNAESTEMESDLELKKD--KKHSKEKKGSKKDIKKDARKD-TESTDAEFDESSKTGFK 533
Query: 798 ETSSVAHALVPAPQEPPPSFPIQKMQIDERE 828
++ + + E P K +IDE +
Sbjct: 534 TSTKIKGS--DTESEESLYKPGAKKKIDESD 562
Score = 42.0 bits (97), Expect = 0.003
Identities = 53/268 (19%), Positives = 103/268 (38%), Gaps = 19/268 (7%)
Query: 644 KYSVFNFLTLPETASLPTTQASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLA 703
KY+ + + A + S + + K +K + D K + K+D+ S
Sbjct: 279 KYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESG 338
Query: 704 RSKAE--PPKQQSSPLVNKEEEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASS 761
SK E K+ L +++ + T + DA+ SR +
Sbjct: 339 DSKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASKNDDKKK 398
Query: 762 SDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQK 821
+K + S D + + E ++ E + TD SV + + P +K
Sbjct: 399 DAKKITFSTDSESELESKESQKDEKKDKKDSKTD--NKKSVKNDEESTDADSEPKGDSKK 456
Query: 822 MQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHK 881
+ DE++ + + + +K+ KKN + + + + KK+KK H K K
Sbjct: 457 GKKDEKK------------GKKDSKKDDKKKDAKKNAESTEMESDLELKKDKK--HSKEK 502
Query: 882 HKGKQKNKKPEKSSSSESSDSSDSQSDE 909
KG +K+ K + +ES+D+ +S +
Sbjct: 503 -KGSKKDIKKDARKDTESTDAEFDESSK 529
Score = 37.4 bits (85), Expect = 0.065
Identities = 53/257 (20%), Positives = 108/257 (42%), Gaps = 47/257 (18%)
Query: 677 KSRKPSRWDTSKHEKKE-DSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTVN 735
K K ++ DT K+ KK D+ SE A+ ++ K+ V K+++ + V
Sbjct: 279 KYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKN----VKKDDK-------KKDVK 327
Query: 736 KDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTD 795
KD ++ G S DE+ + +D++ +DD+ + + S DT+
Sbjct: 328 KDTESTDAESGD-------------SKDERKDTKKDKKKLKKDDKKKDTK-KYPESTDTE 373
Query: 796 LGETSSVAHALVPAPQEPPPSFPIQKM-QIDEREEFGPRLPPVFCPNARQTLEVPQKEKH 854
G+ + S ++K + D++++ ++ F ++ LE + +K
Sbjct: 374 SGDAKDARN----------DSRNLKKASKNDDKKKDAKKI--TFSTDSESELESKESQKD 421
Query: 855 KKNKDKHKAKKEHRRKKEKKKKH-------RKHKHKGKQKNKKPEKSSSSESSDSSDSQS 907
+K KDK +K ++++ + ++ + KGK+ KK +K S + ++
Sbjct: 422 EK-KDKKDSKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKN 480
Query: 908 DEETADVSPQELLRRLK 924
E T S EL + K
Sbjct: 481 AESTEMESDLELKKDKK 497
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 49.7 bits (117), Expect = 1e-05
Identities = 100/487 (20%), Positives = 186/487 (38%), Gaps = 71/487 (14%)
Query: 441 KDKERIKEMKQATDLKAAQLKARSLAQNAQSSRAQLSPAAAAGHCSWNMALGGGTATLKA 500
K++ RI ++ D L++R + Q ++ P +G+ + + T K
Sbjct: 175 KERSRINSSGESGDESDEFLQSRKGQKKNQKNKP--GPNIESGNEDDDASFKIKTVAQK- 231
Query: 501 SNFKPFAKDPEKQKRYDEFLVHMKQGQKDALERCLDPSMTEWERGRERDEFARAALLYAS 560
K K+ E++KR +E K +K+ LE + E R+ +E + +
Sbjct: 232 ---KAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVD 288
Query: 561 SHSTLSSRF---THAKEEDDSDQVEVPRDQENDVGDKQSAVKMKMFGKLTRDTFEWHPDK 617
+ +S T EDD++ + +D++ G+K+ K K G P K
Sbjct: 289 TGVIPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKG----------PSK 338
Query: 618 LLCKRFNVPDPYPDSTLVGLP----RVKRDKYSVFNFLTLPETASLPTTQASSEKVSQHR 673
K L L R KR++ L E + EK + +
Sbjct: 339 ATVKAMQ-------EALAKLKEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKK 391
Query: 674 GPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSA--N 731
+K RK + K E K + S+ + AR++A Q+ + ++ P+
Sbjct: 392 QKEKERK----ERLKKEGKLLTKSQREARARAEATLKLLQAQGVEVPSKDSLPKKRPIYE 447
Query: 732 QTVNKDVDAQAEGEGSRPSMDLFRAI--FASSSDEKSSSSEDEQGDSEDDQAGSGEANFQ 789
K + Q E + SM+L A+ EK + + + E+D +G +++
Sbjct: 448 DKKRKKIPQQLESKEVSESMELCAAVEVMEQGVPEKEETPPPVEPEEEEDTEDAGLDDWE 507
Query: 790 ---SSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTL 846
S ++T+ E + V + P+E +E EE
Sbjct: 508 AMASDEETEKVEGNKVHIEVKENPEE------------EEEEE----------------- 538
Query: 847 EVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESS-DSSDS 905
E ++++ + +++ + + E E+ +K K GK +KKP K SS+S DS D
Sbjct: 539 EEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDD 598
Query: 906 QSDEETA 912
++ EE A
Sbjct: 599 RTKEERA 605
Score = 42.4 bits (98), Expect = 0.002
Identities = 61/316 (19%), Positives = 123/316 (38%), Gaps = 54/316 (17%)
Query: 655 ETASLPTTQASSEKVSQHRGPDKSRKPSR--WDTSKHEKKEDSISEFLSLARSKAEPPK- 711
ET ++ T+ + E+ + K +K + +D + E+ ED S+ A+ K E
Sbjct: 77 ETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDNDSEELEDKDSKSKKTAKPKVEMYSG 136
Query: 712 QQSSPLVNKEEEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFAS--SSDEKSSSS 769
NK + A + Q NK D E E + + I +S S DE
Sbjct: 137 SDDDDDFNKLPKKAKGKA--QKSNKKWDGSEEDEDNSKKIKERSRINSSGESGDESDEFL 194
Query: 770 EDEQGDSEDDQAGSGEANFQSSQDTDLG-ETSSVAHALVPAPQEPPPSFPIQKMQIDERE 828
+ +G ++ + G ++D D + +VA + +K ++ + +
Sbjct: 195 QSRKGQKKNQKNKPGPNIESGNEDDDASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLK 254
Query: 829 EFGPRLPPVFCPNARQTLEVPQKEKHKKNKDKHKAKKE---------------------- 866
E ++ LE +K++ K+ + + K ++E
Sbjct: 255 E-------------KEELETGKKDQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAET 301
Query: 867 ----------HRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDS-SDSQSDEETADVS 915
++KK+KKKK + + K K+K K P K++ ++ + + +EE
Sbjct: 302 PTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKRE 361
Query: 916 PQELLRRLKSLPLRRQ 931
+E ++RL+ L +R+
Sbjct: 362 EEERIKRLEELEAKRK 377
Score = 36.2 bits (82), Expect = 0.15
Identities = 55/288 (19%), Positives = 113/288 (39%), Gaps = 17/288 (5%)
Query: 649 NFLTLPETASLPTTQASSEKVSQHRGPDKSRK-PSRWDTSKHEKKEDSISEFLSLARSKA 707
+F LP+ A +++ + D S+K R + + D EFL + +
Sbjct: 142 DFNKLPKKAKGKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGESGDESDEFLQSRKGQK 201
Query: 708 EPPKQQSSPLVNKEEEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSS 767
+ K + P + E +TV + + E E + + + +E +
Sbjct: 202 KNQKNKPGPNIESGNEDDDASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKEELET 261
Query: 768 SSEDEQGDSEDDQAGSGEANFQSSQDTDLGET-SSVAHALVPAPQEPPPSFPIQKM---- 822
+D Q ++ Q E +S D G +S A P E +K
Sbjct: 262 GKKD-QSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKKK 320
Query: 823 ---QIDEREEFGPRLPPVFCPNARQTL--EVPQKEKHKKNKDKHKAKK----EHRRKKEK 873
+ +E+E+ + P A Q ++ ++E+ +K +++ + K+ E +RK+E+
Sbjct: 321 KKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAKRKEEE 380
Query: 874 KKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDEETADVSPQELLR 921
+ + K + K KQK K+ ++ E + SQ + + +LL+
Sbjct: 381 RLEQEKRERK-KQKEKERKERLKKEGKLLTKSQREARARAEATLKLLQ 427
Score = 31.2 bits (69), Expect = 4.7
Identities = 60/288 (20%), Positives = 112/288 (38%), Gaps = 63/288 (21%)
Query: 670 SQHRGPDKSRKPSRWDTSKHEKKEDSIS---EFLSLARS--KAEPPKQQSSPLVNKEEEH 724
++ + P KS+ + + K + ED I E LSL KA+ P N EEE
Sbjct: 32 AKEQEPQKSKGKKKKEKKKQDFDEDDILKELEELSLEAQGIKADRETVAVKPTENNEEEF 91
Query: 725 AP-------ELSANQTVNKDVDAQAEGEGSR------PSMDLFRAIFASSSDE------- 764
+ Q+ + + + E + S+ P ++++ S SD+
Sbjct: 92 TSKDKKKKGQKGKKQSFDDNDSEELEDKDSKSKKTAKPKVEMY-----SGSDDDDDFNKL 146
Query: 765 ------KSSSSEDEQGDSEDDQAGSGEANFQSSQDTDLGETSSVAHALVPAP------QE 812
K+ S + SE+D+ S + + S+ GE+ + + + Q+
Sbjct: 147 PKKAKGKAQKSNKKWDGSEEDEDNSKKIK-ERSRINSSGESGDESDEFLQSRKGQKKNQK 205
Query: 813 PPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHK-----KNKDKHKAKKEH 867
P I+ D+ F + V QK+ K K +D+ KAK
Sbjct: 206 NKPGPNIESGNEDDDASF-------------KIKTVAQKKAEKKERERKKRDEEKAKLRK 252
Query: 868 RRKKEKKKKHRKHKHKGKQKNKKPEKSS--SSESSDSSDSQSDEETAD 913
++KE+ + +K + K K+ +K E+ + S + D+ + EE A+
Sbjct: 253 LKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAE 300
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 49.3 bits (116), Expect = 2e-05
Identities = 64/297 (21%), Positives = 113/297 (38%), Gaps = 45/297 (15%)
Query: 655 ETASLPTTQASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQ- 713
+ A+ PT ++SS + S ++ +KP + + + S+ A PPK+
Sbjct: 255 KAATTPTRKSSSSEDSSSDEEEEQKKPMK----------NKPGPYSSVPPPSAPPPKKSL 304
Query: 714 -SSPLVNKEEEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEK----SSS 768
+ P E+ P + +++ + + D+ +E E P+ + K SSS
Sbjct: 305 GTQPPKKAVEKQQP-VESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSS 363
Query: 769 SEDEQGDSEDDQAGSGEANF-QSSQDTDLGETSSVAHALVPAPQEP-----------PPS 816
+ SEDD+A S A ++S + T S A AP++P S
Sbjct: 364 DSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADS 423
Query: 817 FPIQKMQIDEREEFGPRLPPVFCPNA--RQTLEVPQKE----KHKKNKDKHKAKKEHRRK 870
++ EE ++ P A + L +P K+ + D + E +
Sbjct: 424 SSSEEESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEE 483
Query: 871 KEKKKKHRKHKHK----------GKQKNKKPEKSSSSESSDSSDSQSDEETADVSPQ 917
K K +K K K K E S+SS S DSS+ + ++ SP+
Sbjct: 484 KTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSPR 540
Score = 47.8 bits (112), Expect = 5e-05
Identities = 68/257 (26%), Positives = 106/257 (41%), Gaps = 36/257 (14%)
Query: 678 SRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQ----- 732
S + S D + +KK+ A++ PPK+ S + + E NQ
Sbjct: 129 SEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPKNQKPKIT 188
Query: 733 --TVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQS 790
TV A + + P + +A +SSS SSSS+D SE+++A +
Sbjct: 189 PVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDD----SEEEKAAA------- 237
Query: 791 SQDTDLGETSSVAHALVPAPQEPP-PSFPIQKMQIDEREEF--------GP--RLPPVFC 839
+ + + VA A V A P S + DE EE GP +PP
Sbjct: 238 TPKKTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSA 297
Query: 840 PNARQTL--EVPQK--EKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKP--EK 893
P +++L + P+K EK + + + E E++KK K K P +K
Sbjct: 298 PPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKK 357
Query: 894 SSSSESSDSSDSQSDEE 910
++ S SSDSSDS S E+
Sbjct: 358 AAES-SSDSSDSDSSED 373
Score = 47.0 bits (110), Expect = 8e-05
Identities = 53/260 (20%), Positives = 97/260 (37%), Gaps = 39/260 (15%)
Query: 660 PTTQASSEKVSQHRGPDKSRKPSRWDTSKHEKKED------SISEFLSLARSKAEPPKQQ 713
P + + + P K K S D+ + E I+ A++KA P +
Sbjct: 145 PVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPKNQKPKITPVTVKAQTKAPPKPAR 204
Query: 714 SSPLVNKEEEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQ 773
++P + + + S++ + + D D++ E + P + + + + K++++ +
Sbjct: 205 AAPKIANGKAASSSSSSSSSSSSD-DSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRK 263
Query: 774 GDSEDDQAGSGEANFQSSQDTDLGETSSVAHALVPAPQE----PPPSFPIQKMQIDEREE 829
S +D + E + G SSV P P++ PP ++K Q
Sbjct: 264 SSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQ------ 317
Query: 830 FGPRLPPVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNK 889
PV E + + D+ + E +K K K K K
Sbjct: 318 ------PV--------------ESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKK 357
Query: 890 KPEKSSSSESSDSSDSQSDE 909
E SSS+SSDS S+ DE
Sbjct: 358 AAE--SSSDSSDSDSSEDDE 375
Score = 37.4 bits (85), Expect = 0.065
Identities = 52/251 (20%), Positives = 88/251 (35%), Gaps = 27/251 (10%)
Query: 687 SKHEKKEDSISEFLSLARSKAEPPK---QQSSPLVNKEEEHAPELSANQTVNKDVDAQ-- 741
++ + S+ + S A+ P+ Q + P+ K ++ A + + ++ + Q
Sbjct: 41 TQQDANASSLLDIYSFWLKSAKVPERKLQANGPVAKKAKKKASSSDSEDSSEEEEEVQGP 100
Query: 742 --------AEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAG------SGEAN 787
A+ G P +A +SSS+E S ++E + Q G + +A
Sbjct: 101 PAKKAAVPAKRVGLPPGKAAAKASESSSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAP 160
Query: 788 FQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLE 847
+ ++ +D SS P + P P+ + R P N +
Sbjct: 161 PKKAKSSDSDSDSSSEDE--PPKNQKPKITPVTVKAQTKAPPKPARAAPKIA-NGKAASS 217
Query: 848 VPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQS 907
+ D + K KK KK K K KSSSSE DS S
Sbjct: 218 SSSSSSSSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKSSSSE-----DSSS 272
Query: 908 DEETADVSPQE 918
DEE P +
Sbjct: 273 DEEEEQKKPMK 283
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 49.3 bits (116), Expect = 2e-05
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 847 EVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHR-KHKHKGKQKNKKPEKSSSSESSDSSDS 905
E +KEK +K+ +K HRR K K+KK R K K + K++ K K +S S D SD
Sbjct: 80 ERSRKEKGEKHHSDSDEEKSHRRLKRKRKKEREKEKRRSKKRRKSKHKRHASSSDDFSDF 139
Query: 906 QSDEETADVSPQE 918
D +D SP E
Sbjct: 140 SDD---SDFSPSE 149
>gi|39932583 hypothetical protein LOC55051 isoform 1 [Homo sapiens]
Length = 1164
Score = 49.3 bits (116), Expect = 2e-05
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 815 PSFPIQKM-QIDEREEFGPRLPPVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEK 873
PSF + + + ++ E P P R L+ ++ NK K K+ R+KK++
Sbjct: 29 PSFCVGSITSLSQQTEAAPAHVSEGLPLTRSHLKSESSDESDTNK---KLKQTSRKKKKE 85
Query: 874 KKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDEETADV 914
KKK RKH+H K K +K SSSS S +DS+ D+ + V
Sbjct: 86 KKKKRKHQHHKKTK-RKHGPSSSSRSETDTDSEKDKPSRGV 125
Score = 35.8 bits (81), Expect = 0.19
Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 14/138 (10%)
Query: 774 GDSEDDQAGSG--EANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFG 831
G SE GS E ++ S+ +G +S++ AP P+ + +
Sbjct: 9 GLSEAPDGGSSRKELDWLSNPSFCVGSITSLSQQTEAAPAHVSEGLPLTRSHLKSESS-- 66
Query: 832 PRLPPVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKP 891
+ T + ++ KK K+K K K++H+ K+ K+KH + +
Sbjct: 67 ---------DESDTNKKLKQTSRKKKKEKKK-KRKHQHHKKTKRKHGPSSSSRSETDTDS 116
Query: 892 EKSSSSESSDSSDSQSDE 909
EK S S +S+E
Sbjct: 117 EKDKPSRGVGGSKKESEE 134
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 48.5 bits (114), Expect = 3e-05
Identities = 50/251 (19%), Positives = 89/251 (35%), Gaps = 11/251 (4%)
Query: 665 SSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEH 724
S + H +K R S H+K+ S S +RS + ++ + + KE+E
Sbjct: 331 SKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKI-KEKER 389
Query: 725 APELSANQTVNKDVDAQAEGE-GSRPSMDLFRAIFASSSDEKSSSSEDEQGDSED-DQAG 782
E + ++ + + E E G D R EK E E+ +D D+
Sbjct: 390 VKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEK 449
Query: 783 SGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNA 842
E + + ++ D + + PP S+ + E R +
Sbjct: 450 EKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRR-------RS 502
Query: 843 RQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKK-KHRKHKHKGKQKNKKPEKSSSSESSD 901
R + P+ K K K R KK+KK+ K R H + +++ + SS D
Sbjct: 503 RSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRD 562
Query: 902 SSDSQSDEETA 912
+ T+
Sbjct: 563 GKEKLEKNSTS 573
Score = 41.6 bits (96), Expect = 0.003
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 850 QKEKHK-KNKDKHKAK-------KEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSD 901
+KEK + KNKD+ K + KE R++E++K+H K + K K+K + EK + S
Sbjct: 406 EKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSK 465
Query: 902 SSDSQSDEETADVSP 916
D + ++ +P
Sbjct: 466 EIDEKRKKDKKSRTP 480
Score = 39.7 bits (91), Expect = 0.013
Identities = 30/146 (20%), Positives = 63/146 (43%), Gaps = 6/146 (4%)
Query: 766 SSSSEDEQGDSEDDQAGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQID 825
S++ E E G S + + G ++ +S +SS +H+ Q S + +
Sbjct: 290 SAAIEPESGKSNERKGGRSRSHTRSKS-----RSSSKSHSRRKRSQSKHRSRSHNRSRSR 344
Query: 826 EREEFGPRLPPVFCPNARQTLEVPQKEKHK-KNKDKHKAKKEHRRKKEKKKKHRKHKHKG 884
+++ + P +R+ + + + K KD + KE R KEK ++ + + K
Sbjct: 345 QKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKE 404
Query: 885 KQKNKKPEKSSSSESSDSSDSQSDEE 910
++K K+ K+ + D + D+E
Sbjct: 405 REKEKERGKNKDRDKEREKDREKDKE 430
Score = 37.7 bits (86), Expect = 0.050
Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 843 RQTLEVPQKEKHKKNKDKHKAK-KEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSD 901
+ T E ++++ K KD+ K + +E R+KEK++ K + K ++K+++ +K E
Sbjct: 378 KDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRERER 437
Query: 902 SSDSQSDEETADVSPQE 918
+ + D + Q+
Sbjct: 438 EKEHEKDRDKEKEKEQD 454
Score = 37.0 bits (84), Expect = 0.086
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 851 KEKHK-KNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDE 909
KE+ K + KDK K +E R+KE +K K K K + K K+ EK S E +
Sbjct: 419 KEREKDREKDKEK-DREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKS 477
Query: 910 ETADVSPQELLRRLKSLPLRRQ 931
T S R S RR+
Sbjct: 478 RTPPRSYNASRRSRSSSRERRR 499
Score = 30.4 bits (67), Expect = 8.0
Identities = 16/72 (22%), Positives = 35/72 (48%)
Query: 851 KEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDEE 910
KEK ++ + + + +K+ ++KEK++ K + K + K ++ +S S +
Sbjct: 429 KEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASR 488
Query: 911 TADVSPQELLRR 922
+ S +E RR
Sbjct: 489 RSRSSSRERRRR 500
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 48.5 bits (114), Expect = 3e-05
Identities = 50/251 (19%), Positives = 89/251 (35%), Gaps = 11/251 (4%)
Query: 665 SSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEH 724
S + H +K R S H+K+ S S +RS + ++ + + KE+E
Sbjct: 215 SKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKI-KEKER 273
Query: 725 APELSANQTVNKDVDAQAEGE-GSRPSMDLFRAIFASSSDEKSSSSEDEQGDSED-DQAG 782
E + ++ + + E E G D R EK E E+ +D D+
Sbjct: 274 VKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEK 333
Query: 783 SGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNA 842
E + + ++ D + + PP S+ + E R +
Sbjct: 334 EKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRR-------RS 386
Query: 843 RQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKK-KHRKHKHKGKQKNKKPEKSSSSESSD 901
R + P+ K K K R KK+KK+ K R H + +++ + SS D
Sbjct: 387 RSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRD 446
Query: 902 SSDSQSDEETA 912
+ T+
Sbjct: 447 GKEKLEKNSTS 457
Score = 41.6 bits (96), Expect = 0.003
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 850 QKEKHK-KNKDKHKAK-------KEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSD 901
+KEK + KNKD+ K + KE R++E++K+H K + K K+K + EK + S
Sbjct: 290 EKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSK 349
Query: 902 SSDSQSDEETADVSP 916
D + ++ +P
Sbjct: 350 EIDEKRKKDKKSRTP 364
Score = 39.7 bits (91), Expect = 0.013
Identities = 30/146 (20%), Positives = 63/146 (43%), Gaps = 6/146 (4%)
Query: 766 SSSSEDEQGDSEDDQAGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQID 825
S++ E E G S + + G ++ +S +SS +H+ Q S + +
Sbjct: 174 SAAIEPESGKSNERKGGRSRSHTRSKS-----RSSSKSHSRRKRSQSKHRSRSHNRSRSR 228
Query: 826 EREEFGPRLPPVFCPNARQTLEVPQKEKHK-KNKDKHKAKKEHRRKKEKKKKHRKHKHKG 884
+++ + P +R+ + + + K KD + KE R KEK ++ + + K
Sbjct: 229 QKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKE 288
Query: 885 KQKNKKPEKSSSSESSDSSDSQSDEE 910
++K K+ K+ + D + D+E
Sbjct: 289 REKEKERGKNKDRDKEREKDREKDKE 314
Score = 37.7 bits (86), Expect = 0.050
Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 843 RQTLEVPQKEKHKKNKDKHKAK-KEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSD 901
+ T E ++++ K KD+ K + +E R+KEK++ K + K ++K+++ +K E
Sbjct: 262 KDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRERER 321
Query: 902 SSDSQSDEETADVSPQE 918
+ + D + Q+
Sbjct: 322 EKEHEKDRDKEKEKEQD 338
Score = 37.0 bits (84), Expect = 0.086
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 851 KEKHK-KNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDE 909
KE+ K + KDK K +E R+KE +K K K K + K K+ EK S E +
Sbjct: 303 KEREKDREKDKEK-DREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKS 361
Query: 910 ETADVSPQELLRRLKSLPLRRQ 931
T S R S RR+
Sbjct: 362 RTPPRSYNASRRSRSSSRERRR 383
Score = 30.4 bits (67), Expect = 8.0
Identities = 16/72 (22%), Positives = 35/72 (48%)
Query: 851 KEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDEE 910
KEK ++ + + + +K+ ++KEK++ K + K + K ++ +S S +
Sbjct: 313 KEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASR 372
Query: 911 TADVSPQELLRR 922
+ S +E RR
Sbjct: 373 RSRSSSRERRRR 384
>gi|4507347 TBP-associated factor 2 [Homo sapiens]
Length = 1199
Score = 48.5 bits (114), Expect = 3e-05
Identities = 56/180 (31%), Positives = 72/180 (40%), Gaps = 18/180 (10%)
Query: 742 AEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAG-SGEANFQSSQDT---DLG 797
A S P + F+ F+SS DE+ E + D QA S N T
Sbjct: 1021 ANNPSSHPQLVGFQNPFSSSQDEE----EIDMDTVHDSQAFISHHLNMLERPSTPGLSKY 1076
Query: 798 ETSSVAHALVPAPQEPPPSFPIQKMQID---EREEFGPRLPPV---FCPNARQTLEVPQK 851
+S AL+P S P K Q R+ G P+ P A L V K
Sbjct: 1077 RPASSRSALIPQHSAGCDSTPTTKPQWSLELARKGTGKEQAPLEMSMHPAASAPLSVFTK 1136
Query: 852 EKH-KKNKDKHKAKKEHRRKKEKKKKHR---KHKHKGKQKNKKPEKSSSSESSDSSDSQS 907
E K+ D H +KK+KK KH+ KHKH K+K+K+P SS S S S S
Sbjct: 1137 ESTASKHSDHHHHHHHEHKKKKKKHKHKHKHKHKHDSKEKDKEPFTFSSPASGRSIRSPS 1196
>gi|8923271 coiled-coil domain containing 49 [Homo sapiens]
Length = 425
Score = 48.1 bits (113), Expect = 4e-05
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 843 RQTLEVPQK-EKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSD 901
R+ L P K +K K+ KKE ++KKEKKKKH+KHKH+ ++ SS +
Sbjct: 151 REVLNNPVKMKKIKELLQMSLEKKEKKKKKEKKKKHKKHKHRSSSSDR------SSSEDE 204
Query: 902 SSDSQSDEETADVSP 916
S +S ++ A+ SP
Sbjct: 205 HSAGRSQKKMANSSP 219
Score = 33.5 bits (75), Expect = 0.95
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 17/124 (13%)
Query: 813 PPPSFPIQKMQIDER---EEFGPRLPPVFCPNARQTL--------EVPQKEKHKKNKDKH 861
P + +KM+ E E G +F P+ +L E P KK ++K
Sbjct: 91 PIDKYVFEKMEEKEAGCSSETGLLPGSIFAPSGANSLLDMASKIREDPLFIIRKKEEEKK 150
Query: 862 KAKKEHRRKKEKKKK------HRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDEETADVS 915
+ + K +K K+ +K K K K+K KK +K SS S DE +A S
Sbjct: 151 REVLNNPVKMKKIKELLQMSLEKKEKKKKKEKKKKHKKHKHRSSSSDRSSSEDEHSAGRS 210
Query: 916 PQEL 919
+++
Sbjct: 211 QKKM 214
>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
sapiens]
Length = 729
Score = 47.8 bits (112), Expect = 5e-05
Identities = 63/256 (24%), Positives = 98/256 (38%), Gaps = 31/256 (12%)
Query: 665 SSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEF-----LSLARSKAEPPKQQSSPLVN 719
SSE+ ++ P K P+ S+ E K SI + R+ A P S
Sbjct: 470 SSEEEAEVAAPTKGPAPAPQQCSEPETKWSSIPASKPRRGTAPTRTAAPPWPGGVSVRTG 529
Query: 720 KEEEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDD 779
E+ + A K QA S P + + + D+ SE G
Sbjct: 530 PEKRSSTRPPAEMEPGKG--EQASSSESDPEGPIAAQMLSFVMDDPDFESE---GSDTQR 584
Query: 780 QAGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQI-DEREEFGPRLP--- 835
+A S TD E PA PPP P+ ++ ++ + FG L
Sbjct: 585 RADDFPVRDDPSDVTDEDEG--------PAEPPPPPKLPLPAFRLKNDSDLFGLGLEEAG 636
Query: 836 PVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHK--GKQ----KNK 889
P + + P KEK KK K K K+E + +KK KH+K K K GK+ + +
Sbjct: 637 PKESSEEGKEGKTPSKEKKKKKK---KGKEEEEKAAKKKSKHKKSKDKEEGKEERRRRQQ 693
Query: 890 KPEKSSSSESSDSSDS 905
+P +S ++D ++
Sbjct: 694 RPPRSRERTAADELEA 709
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 47.4 bits (111), Expect = 6e-05
Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 22/240 (9%)
Query: 669 VSQHRGPDKSRKPSRWD-------TSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKE 721
+++ RGP +S P+ D T + KK+ + S A ++ E ++ KE
Sbjct: 16 MARWRGPTQSVGPTIQDYLNRPRPTWEEVKKQLENKKTGSKALAEFEEKMNENW---KKE 72
Query: 722 EEHAPE--LSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDE-----QG 774
E + E LS N++ +K + E + R + +SSSD SSSS+ E QG
Sbjct: 73 LEKSREKLLSGNESSSK----KRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQG 128
Query: 775 DSEDDQAGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRL 834
+ + QSS E+ + E ++ + ++ + P
Sbjct: 129 KRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETEKEKDVRSLSKKRKKSY-PDD 187
Query: 835 PPVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKS 894
P+ ++ ++ + KK + + + + + + KK+KKK+H+KH K K+K+ KS
Sbjct: 188 KPLSSESSSESDYEEDVQAKKKRRCEEREQAKEKVKKKKKKQHKKHSKKKKKKSGSSHKS 247
Score = 45.4 bits (106), Expect = 2e-04
Identities = 32/114 (28%), Positives = 46/114 (40%), Gaps = 9/114 (7%)
Query: 797 GETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHKK 856
G T SV + P P++ K Q++ ++ L E E KK
Sbjct: 21 GPTQSVGPTIQDYLNRPRPTWEEVKKQLENKKTGSKALAE---------FEEKMNENWKK 71
Query: 857 NKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDEE 910
+K + K + KK+ RK K K K SSS SS SSDS+ +E+
Sbjct: 72 ELEKSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEK 125
Score = 34.7 bits (78), Expect = 0.42
Identities = 47/222 (21%), Positives = 77/222 (34%), Gaps = 60/222 (27%)
Query: 664 ASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEEE 723
+S ++ + + KS + S +S S SE + K K+ S ++
Sbjct: 87 SSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSST 146
Query: 724 HAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGS 783
H E + ++V K ++ E E + L + S D+K SSE
Sbjct: 147 HESESESKESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLSSE------------- 193
Query: 784 GEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNAR 843
SS ++D E +K + +ERE+
Sbjct: 194 ------SSSESDYEEDVQAK----------------KKRRCEEREQ-------------- 217
Query: 844 QTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGK 885
KEK KK K KK+H++ +KKKK HK +
Sbjct: 218 ------AKEKVKKKK-----KKQHKKHSKKKKKKSGSSHKSR 248
Score = 34.3 bits (77), Expect = 0.55
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 852 EKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSD 908
E ++K+ K KK+ + + EK+K R K K K+ +K SSESS SD + D
Sbjct: 148 ESESESKESVKKKKKSKDETEKEKDVRSLSKKRK-KSYPDDKPLSSESSSESDYEED 203
Score = 31.2 bits (69), Expect = 4.7
Identities = 17/52 (32%), Positives = 22/52 (42%)
Query: 850 QKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSD 901
+ E K K K K + +KEK + K K + KP S SS SD
Sbjct: 148 ESESESKESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLSSESSSESD 199
>gi|40068059 CBF1 interacting corepressor [Homo sapiens]
Length = 450
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 844 QTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSS 903
++L QK+K + D+ + KK+ + +K+KK + + KHK K K+ SSSS SS +
Sbjct: 214 KSLTTKQKQKLLRKLDRLEKKKKKKDRKKKKFQKSRSKHK-KHKSSSSSSSSSSSSSSTE 272
Query: 904 DSQSDEETADVSPQELLRRLK 924
S+S E+ + ++ ++R K
Sbjct: 273 TSESSSESESNNKEKKIQRKK 293
Score = 46.2 bits (108), Expect = 1e-04
Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 847 EVPQKEKHKKNKDKHKAK---KEHRRKKEKKKKHRKHKHKGKQKNK-KPEKSSSSESSDS 902
E P+ E K K K K K R +K+KKKK RK K K ++K K KSSSS SS S
Sbjct: 206 EDPEVEFLKSLTTKQKQKLLRKLDRLEKKKKKKDRKKKKFQKSRSKHKKHKSSSSSSSSS 265
Query: 903 SDSQSDEETADVSPQELLRRLKSLPLRRQ 931
S S S E + S E + K + +++
Sbjct: 266 SSSSSTETSESSSESESNNKEKKIQRKKR 294
Score = 35.4 bits (80), Expect = 0.25
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Query: 850 QKEKHKKNK----------DKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSES 899
Q++K KKNK +K K+KK ++ H + K K K + K E S
Sbjct: 290 QRKKRKKNKCSGHNNSDSEEKDKSKKRKLHEELSSSHHNREKAKEKPRFLKHESSREDSK 349
Query: 900 SDSSDSQSDEETADVSPQE 918
SDS T SP++
Sbjct: 350 WSHSDSDKKSRTHKHSPEK 368
Score = 33.1 bits (74), Expect = 1.2
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 16/77 (20%)
Query: 850 QKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKK----------------PEK 893
+K+K KK K + H +++ K+K R KH+ +++ K PEK
Sbjct: 309 EKDKSKKRKLHEELSSSHHNREKAKEKPRFLKHESSREDSKWSHSDSDKKSRTHKHSPEK 368
Query: 894 SSSSESSDSSDSQSDEE 910
S SS S EE
Sbjct: 369 RGSERKEGSSRSHGREE 385
Score = 30.4 bits (67), Expect = 8.0
Identities = 15/70 (21%), Positives = 27/70 (38%)
Query: 851 KEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDEE 910
+ KHKK+K + + + + K KK ++ ++ S + SD E
Sbjct: 249 RSKHKKHKSSSSSSSSSSSSSSTETSESSSESESNNKEKKIQRKKRKKNKCSGHNNSDSE 308
Query: 911 TADVSPQELL 920
D S + L
Sbjct: 309 EKDKSKKRKL 318
Score = 30.4 bits (67), Expect = 8.0
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 12/74 (16%)
Query: 850 QKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHK------------HKGKQKNKKPEKSSSS 897
+K+ +K + K+K + E+K K +K K K K+K + + SS
Sbjct: 286 EKKIQRKKRKKNKCSGHNNSDSEEKDKSKKRKLHEELSSSHHNREKAKEKPRFLKHESSR 345
Query: 898 ESSDSSDSQSDEET 911
E S S S SD+++
Sbjct: 346 EDSKWSHSDSDKKS 359
>gi|11067749 bromodomain containing protein 3 [Homo sapiens]
Length = 726
Score = 47.0 bits (110), Expect = 8e-05
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 42/194 (21%)
Query: 749 PSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDTDLGETSSVAHALVP 808
P++ A S E S SSE+ DS S ++++ +L E H +
Sbjct: 423 PALPAPAAPMVSKGAESSRSSEESSSDS----GSSDSEEERATRLAELQEQLKAVHEQLA 478
Query: 809 APQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHR 868
A + P + P +K E +KEK KK+K+K K K + +
Sbjct: 479 ALSQAPVNKPKKKK------------------------EKKEKEKKKKDKEKEKEKHKVK 514
Query: 869 RKKEKKKKHRKHKHKGKQKNKKPEKSSSS------------ESSDSSDSQSDEETADVSP 916
++EKK K + +QK +K++S+ ++S S DS+ +EE +S
Sbjct: 515 AEEEKKAKVAPPAKQAQQKKAPAKKANSTTTAGRQLKKGGKQASASYDSEEEEEGLPMSY 574
Query: 917 QELLRRLKSLPLRR 930
E +R SL + R
Sbjct: 575 DE--KRQLSLDINR 586
Score = 41.2 bits (95), Expect = 0.005
Identities = 78/378 (20%), Positives = 140/378 (37%), Gaps = 65/378 (17%)
Query: 596 SAVKMKMFGKLTRDTFEWHPDKLL----CKRFNVPDPYPDSTLVGLPRVKRDKYSVFNFL 651
S VK KM G+ D + D L C ++N PD +V + R +D + + F
Sbjct: 359 STVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPPD----HEVVAMARKLQDVFEM-RFA 413
Query: 652 TLP----ETASLPTTQA-----------SSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSI 696
+P E +LP A SSE+ S G S + ++ +++ ++
Sbjct: 414 KMPDEPVEAPALPAPAAPMVSKGAESSRSSEESSSDSGSSDSEEERATRLAELQEQLKAV 473
Query: 697 SEFLS-LARSKAEPPKQQSSPLVNKE---------EEHAPELSANQTVNKDVDAQAEGEG 746
E L+ L+++ PK++ ++ E+H + + A+ +
Sbjct: 474 HEQLAALSQAPVNKPKKKKEKKEKEKKKKDKEKEKEKHKVKAEEEKKAKVAPPAKQAQQK 533
Query: 747 SRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAG---SGEANFQSSQDTD------LG 797
P+ A +K DSE+++ G S + Q S D + LG
Sbjct: 534 KAPAKKANSTTTAGRQLKKGGKQASASYDSEEEEEGLPMSYDEKRQLSLDINRLPGEKLG 593
Query: 798 ETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNARQTLEVPQKEKHKKN 857
+ + P+ ++ P +++ID E P + L+ Q++ +
Sbjct: 594 RVVHIIQSREPSLRDSNPD----EIEIDF-ETLKPTTLRELERYVKSCLQKKQRKPFSAS 648
Query: 858 KDKHKAKKEHRRKKEKKK-----------------KHRKHKHKGKQKNKKPEKSSSSESS 900
K AK + +EKKK K + + G + P + SSS SS
Sbjct: 649 GKKQAAKSKEELAQEKKKELEKRLQDVSGQLSSSKKPARKEKPGSAPSGGPSRLSSSSSS 708
Query: 901 DSSDSQSDEETADVSPQE 918
+S S S ++D S E
Sbjct: 709 ESGSSSSSGSSSDSSDSE 726
>gi|42718020 retinitis pigmentosa 9 [Homo sapiens]
Length = 221
Score = 47.0 bits (110), Expect = 8e-05
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 843 RQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDS 902
+Q LE ++ + + + K++H++KK+K+K ++ K K K+K +K + S S+E SDS
Sbjct: 161 KQLLEDSTSDEDRSSSSSSEGKEKHKKKKKKEKHKKRKKEKKKKKKRKHKSSKSNEGSDS 220
Score = 35.4 bits (80), Expect = 0.25
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 859 DKHKAKKEHRRKKEKKKK-HRKHKHKGKQKNKKPEKS---SSSESSDSSDSQ 906
D+ ++ KEK KK +K KHK ++K KK +K SS+S++ SDS+
Sbjct: 170 DEDRSSSSSSEGKEKHKKKKKKEKHKKRKKEKKKKKKRKHKSSKSNEGSDSE 221
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 46.6 bits (109), Expect = 1e-04
Identities = 46/234 (19%), Positives = 90/234 (38%), Gaps = 15/234 (6%)
Query: 666 SEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSSPLVNKEEEHA 725
S + + + K + ++D SK + + + + E K S NK +
Sbjct: 328 SNEKGERKKEKKEKTEKKFDHSKKSEDTQKVKDEKQAKEKEVESLKLPSEKNSNKAKTVE 387
Query: 726 PELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGD--SEDDQAGS 783
++ DVD + S + + +E +S E+G+ S+D++
Sbjct: 388 GTKEDFSLIDSDVDGLTDITVSSVHTSDLSSFEEDTEEEVVTSDSMEEGEITSDDEEKNK 447
Query: 784 GEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDEREEFGPRLPPVFCPNAR 843
+ D+ G+T SV HA V P + K D +E + R
Sbjct: 448 QNKTKTQTSDSSEGKTKSVRHAYVHKP------YLYSKYYSDSDDE-------LTVEQRR 494
Query: 844 QTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSS 897
Q++ ++E+ + + + +E R++K +K K K K +G+ E S+ S
Sbjct: 495 QSIAKEKEERLLRRQINREKLEEKRKQKAEKTKSSKTKGQGRSSVDLEESSTKS 548
Score = 38.5 bits (88), Expect = 0.029
Identities = 113/621 (18%), Positives = 222/621 (35%), Gaps = 102/621 (16%)
Query: 379 PMVAATSENSHL-LQVLSESAGKATPDPGTHSKHQLNASKRAELLGETPIQGSATSVLEF 437
P++A ++E H V SAG+ P K + + + E+ G +G S L
Sbjct: 2398 PVLAVSTEEGHNGPSVHKPSAGQGHPSAVCAEKEEKHGKECPEI-GPFAGRGQKESTLHL 2456
Query: 438 LSQKDKERIKEMKQATDLK-----------AAQLKARSLAQNAQSSRAQLSPAAAAGHCS 486
++ ++K + Q D A+ R L NA S P +G +
Sbjct: 2457 INAEEKNVLLNSLQKEDKSPETGTAGGSSTASYSAGRGLEGNANSPAHLRGPEQTSGQTA 2516
Query: 487 WNMALG------GGTATLKASNFKPFAKDPEKQKRYDEFLVHMKQGQKDALERCLDPSMT 540
+ ++ T +KA + P + FL +QG +D L+ S T
Sbjct: 2517 KDPSVSIRYLAAVNTGAIKADDMPPVQGTVAEHS----FLPAEQQGSEDNLKT----STT 2568
Query: 541 EWERGRE------------------------------RDEFARAALLYASSHSTLSSRFT 570
+ G+E +++++ AS+ T T
Sbjct: 2569 KCITGQESKIAPSHTMIPPATYSVALLAPKCEQDLTIKNDYSGKWTDQASAEKTGDDNST 2628
Query: 571 HAKEEDDSDQVEVPRDQEN--DVGDKQSAVK----MKMFGKLTRDTFEWHPDKLLCKRFN 624
++ D + +EN D+G+++S + +K+ L + + ++ +
Sbjct: 2629 RKSFPEEGDIMVTVSSEENVCDIGNEESPLNVLGGLKLKANLKMEAYVPSEEEKNGEILA 2688
Query: 625 VPDPYPDSTLVGLPRVKRDKYSVFNFLTLPETASLPTTQASSEKVSQHRGPDKS-RKPSR 683
P+ G+ ++R+ V L + + + SE S ++G S RK +
Sbjct: 2689 PPESLCGGKPSGIAELQREPLLVNESLNVENSGFRTNEEIHSE--SYNKGEISSGRKDNA 2746
Query: 684 WDTSKHEKKED--SISEFLSLARSKAEPPKQQSSPLVNKEEEHAPELSANQTVNKDVDAQ 741
S H + D + E + P +++ ++ E+E P+ + + ++ AQ
Sbjct: 2747 EAISGHSVEADPKEVEE-----EERHMPKRKRKQHYLSSEDE--PDDNPDVLDSRIETAQ 2799
Query: 742 AEGEGSRP-------SMDLFRAIFASSSDEKSSSSEDEQGDSEDDQAGSGEANFQSSQDT 794
+ + P S DL SS ++S E+ D +GE Q+ DT
Sbjct: 2800 RQCPETEPHDTKEENSRDLEELPKTSSETNSTTSRVMEEKDEYSSSETTGEKPEQNDDDT 2859
Query: 795 DLGETSSVAHALVPAPQEPPPSFPIQ---KMQIDEREEFGPRLPPVFCPNARQTLEVPQK 851
+ ++ + P +P++ KM+ D + + G + V + L+V Q
Sbjct: 2860 IKSQEEDQP-IIIKRKRGRPRKYPVETTLKMKDDSKTDTG--IVTVEQSPSSSKLKVMQT 2916
Query: 852 EKHKKN--------------KDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSS 897
++ K ++K R +K K+ + + +K +KS S
Sbjct: 2917 DESNKETANLQERSISNDDGEEKIVTSVRRRGRKPKRSLTVSDDAESSEPERKRQKSVSD 2976
Query: 898 ESSDSSDSQSDEETADVSPQE 918
D + +SDEE + E
Sbjct: 2977 PVEDKKEQESDEEEEEEEEDE 2997
Score = 36.6 bits (83), Expect = 0.11
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 851 KEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQSDEE 910
KEK+K +KD + E RK K R KH K KK E S + DS ++
Sbjct: 998 KEKYKSDKDSTSTRLE--RKLSDGHKSRSLKHSSKDIKKKDENKSDDKDGKEVDSSHEKA 1055
Query: 911 TADVSPQE--LLRRL 923
+ S E L RRL
Sbjct: 1056 RGNSSLMEKKLSRRL 1070
Score = 32.3 bits (72), Expect = 2.1
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 32/185 (17%)
Query: 721 EEEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSEDDQ 780
+E A S + K + ++ S+P+ D +S +K +SED D E
Sbjct: 213 QEASAARASTETSNAKTSERASKKLPSQPTTD--------TSTDKERTSED-MADKEKST 263
Query: 781 AGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQI-----DEREEFGPRLP 835
A SG +++ ++ E S + P P E ++ + + D ++E
Sbjct: 264 ADSGGEGLETAPKSE--EFSDL-----PCPVEEIKNYTKEHNNLILLNKDVQQE------ 310
Query: 836 PVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKH-RKHKHKGKQKNKKPEKS 894
+ ++ + EK + +K + KKE + K EKK H +K + K K++K K
Sbjct: 311 ----SSEQKNKSTDKGEKKPDSNEKGERKKEKKEKTEKKFDHSKKSEDTQKVKDEKQAKE 366
Query: 895 SSSES 899
ES
Sbjct: 367 KEVES 371
Score = 32.0 bits (71), Expect = 2.8
Identities = 47/264 (17%), Positives = 100/264 (37%), Gaps = 53/264 (20%)
Query: 536 DPSMTEWERGRERDEFARAALLYASSHSTLSSRFTHAKEEDDSDQVEVPRDQENDVGDKQ 595
+P T+ E R+ +E + + S ++ +SR K+E S + + ++ND
Sbjct: 2806 EPHDTKEENSRDLEELPKTS----SETNSTTSRVMEEKDEYSSSETTGEKPEQND----D 2857
Query: 596 SAVKMKMFGKLTRDTFEWHPDKLLCKRFNVPDPYPDSTLVGLPRVKRDKYSVFNFLTLPE 655
+K + E ++ ++ P YP T + ++K D + +T+ +
Sbjct: 2858 DTIKSQ----------EEDQPIIIKRKRGRPRKYPVETTL---KMKDDSKTDTGIVTVEQ 2904
Query: 656 TASLPTTQASSEKVSQHRGPDKSRKPSRWDTSKHEKKEDSISEFLSLARSKAEPPKQQSS 715
+ S +S KV Q D+S K + + +D + ++ R + PK+
Sbjct: 2905 SPS-----SSKLKVMQ---TDESNKETANLQERSISNDDGEEKIVTSVRRRGRKPKR--- 2953
Query: 716 PLVNKEEEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGD 775
+ TV+ D E S P +++ D+K S++E+ +
Sbjct: 2954 ---------------SLTVSDDA------ESSEPERKRQKSVSDPVEDKKEQESDEEEEE 2992
Query: 776 SEDDQAGSGEANFQSSQDTDLGET 799
E+D+ + + +T
Sbjct: 2993 EEEDEPSGATTRSTTRSEAQRSKT 3016
Score = 31.2 bits (69), Expect = 4.7
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 847 EVPQKEKHKKNKDKHKAKKE-------HRRKKEKKKKHRKHKHKGKQKNK---KPEKSSS 896
+V Q+ +KNK K +K+ R+K++K+K +K H K ++ K EK +
Sbjct: 306 DVQQESSEQKNKSTDKGEKKPDSNEKGERKKEKKEKTEKKFDHSKKSEDTQKVKDEKQAK 365
Query: 897 SESSDSSDSQSDEET 911
+ +S S++ +
Sbjct: 366 EKEVESLKLPSEKNS 380
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.128 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,191,056
Number of Sequences: 37866
Number of extensions: 2100730
Number of successful extensions: 21024
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 495
Number of HSP's that attempted gapping in prelim test: 11808
Number of HSP's gapped (non-prelim): 5815
length of query: 931
length of database: 18,247,518
effective HSP length: 112
effective length of query: 819
effective length of database: 14,006,526
effective search space: 11471344794
effective search space used: 11471344794
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.