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Search of human proteins with 113930754
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113930754 Src-like-adaptor isoform a [Homo sapiens]
(276 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194328732 Src-like-adaptor isoform c [Homo sapiens] 566 e-162
gi|194328725 Src-like-adaptor isoform b [Homo sapiens] 566 e-162
gi|113930754 Src-like-adaptor isoform a [Homo sapiens] 566 e-162
gi|14149916 Src-like-adaptor 2 isoform a [Homo sapiens] 186 1e-47
gi|28416424 Src-like-adaptor 2 isoform b [Homo sapiens] 142 2e-34
gi|33469982 B lymphoid tyrosine kinase [Homo sapiens] 142 3e-34
gi|30795229 hemopoietic cell kinase isoform p61HCK [Homo sapiens] 137 8e-33
gi|162287326 Yamaguchi sarcoma viral (v-yes-1) oncogene homolog ... 136 2e-32
gi|112789548 lymphocyte-specific protein tyrosine kinase precurs... 132 3e-31
gi|112789546 lymphocyte-specific protein tyrosine kinase precurs... 132 3e-31
gi|4505055 Yamaguchi sarcoma viral (v-yes-1) oncogene homolog is... 132 3e-31
gi|4885661 viral oncogene yes-1 homolog 1 [Homo sapiens] 126 2e-29
gi|4503823 protein-tyrosine kinase fyn isoform a [Homo sapiens] 124 1e-28
gi|112382244 proto-oncogene tyrosine-protein kinase FGR [Homo sa... 122 4e-28
gi|112382241 proto-oncogene tyrosine-protein kinase FGR [Homo sa... 122 4e-28
gi|4885235 proto-oncogene tyrosine-protein kinase FGR [Homo sapi... 122 4e-28
gi|23510362 protein-tyrosine kinase fyn isoform b [Homo sapiens] 119 3e-27
gi|38202217 proto-oncogene tyrosine-protein kinase SRC [Homo sap... 111 8e-25
gi|4885609 proto-oncogene tyrosine-protein kinase SRC [Homo sapi... 111 8e-25
gi|4503787 fyn-related kinase [Homo sapiens] 109 2e-24
gi|23510364 protein-tyrosine kinase fyn isoform c [Homo sapiens] 105 3e-23
gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a... 75 6e-14
gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b... 75 6e-14
gi|153266778 arg tyrosine kinase isoform c [Homo sapiens] 74 1e-13
gi|6382062 arg tyrosine kinase isoform b [Homo sapiens] 74 1e-13
gi|209862778 arg tyrosine kinase isoform e [Homo sapiens] 74 1e-13
gi|209862772 arg tyrosine kinase isoform d [Homo sapiens] 74 1e-13
gi|153266757 arg tyrosine kinase isoform a [Homo sapiens] 74 1e-13
gi|15718680 IL2-inducible T-cell kinase [Homo sapiens] 68 8e-12
gi|4557377 Bruton agammaglobulinemia tyrosine kinase [Homo sapiens] 68 1e-11
>gi|194328732 Src-like-adaptor isoform c [Homo sapiens]
Length = 316
Score = 566 bits (1458), Expect = e-162
Identities = 276/276 (100%), Positives = 276/276 (100%)
Query: 1 MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWK 60
MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWK
Sbjct: 41 MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWK 100
Query: 61 AISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFY 120
AISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFY
Sbjct: 101 AISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFY 160
Query: 121 SLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQST 180
SLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQST
Sbjct: 161 SLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQST 220
Query: 181 AAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLT 240
AAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLT
Sbjct: 221 AAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLT 280
Query: 241 SEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED 276
SEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
Sbjct: 281 SEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED 316
>gi|194328725 Src-like-adaptor isoform b [Homo sapiens]
Length = 293
Score = 566 bits (1458), Expect = e-162
Identities = 276/276 (100%), Positives = 276/276 (100%)
Query: 1 MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWK 60
MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWK
Sbjct: 18 MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWK 77
Query: 61 AISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFY 120
AISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFY
Sbjct: 78 AISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFY 137
Query: 121 SLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQST 180
SLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQST
Sbjct: 138 SLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQST 197
Query: 181 AAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLT 240
AAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLT
Sbjct: 198 AAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLT 257
Query: 241 SEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED 276
SEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
Sbjct: 258 SEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED 293
>gi|113930754 Src-like-adaptor isoform a [Homo sapiens]
Length = 276
Score = 566 bits (1458), Expect = e-162
Identities = 276/276 (100%), Positives = 276/276 (100%)
Query: 1 MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWK 60
MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWK
Sbjct: 1 MGNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWK 60
Query: 61 AISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFY 120
AISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFY
Sbjct: 61 AISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFY 120
Query: 121 SLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQST 180
SLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQST
Sbjct: 121 SLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQST 180
Query: 181 AAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLT 240
AAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLT
Sbjct: 181 AAPAVRASSSPVTLRQKTVDWRRVSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLT 240
Query: 241 SEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED 276
SEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED
Sbjct: 241 SEDNTSFDRKKKSISLMYGGSKRKSSFFSSPPYFED 276
>gi|14149916 Src-like-adaptor 2 isoform a [Homo sapiens]
Length = 261
Score = 186 bits (473), Expect = 1e-47
Identities = 97/219 (44%), Positives = 136/219 (62%), Gaps = 10/219 (4%)
Query: 30 LSDYPSPDISPPIFRRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGL 89
L +P+ + R GE L ++S++G WW +S +GRE IP + VA+V HGWL+EGL
Sbjct: 40 LGSFPAGGPAELSLRLGEPLTIVSEDGDWWTVLSEVSGREYNIPSVHVAKVSHGWLYEGL 99
Query: 90 GRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVR------HRQVKHYRIFRLPNNWYY 143
R+KAEELL LP G+F+IRES+T++G YSLSVR +++HYRI L N W Y
Sbjct: 100 SREKAEELLLLPGNPGGAFLIRESQTRRGSYSLSVRLSRPASWDRIRHYRIHCLDNGWLY 159
Query: 144 ISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRR 203
ISPRLTF L+ LV+HYSE+AD +CC+L PC+ Q + PVT+++ ++W+
Sbjct: 160 ISPRLTFPSLQALVDHYSELADDICCLLKEPCVLQRAGPLPGKDIPLPVTVQRTPLNWKE 219
Query: 204 VSRLQEDPEGTENPLGVDESLFSYGLRESIASYLSLTSE 242
+ E +ESL S GLRES++ Y+SL E
Sbjct: 220 LDSSLLFSEAATG----EESLLSEGLRESLSFYISLNDE 254
>gi|28416424 Src-like-adaptor 2 isoform b [Homo sapiens]
Length = 210
Score = 142 bits (359), Expect = 2e-34
Identities = 71/139 (51%), Positives = 94/139 (67%), Gaps = 6/139 (4%)
Query: 30 LSDYPSPDISPPIFRRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGL 89
L +P+ + R GE L ++S++G WW +S +GRE IP + VA+V HGWL+EGL
Sbjct: 40 LGSFPAGGPAELSLRLGEPLTIVSEDGDWWTVLSEVSGREYNIPSVHVAKVSHGWLYEGL 99
Query: 90 GRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVR------HRQVKHYRIFRLPNNWYY 143
R+KAEELL LP G+F+IRES+T++G YSLSVR +++HYRI L N W Y
Sbjct: 100 SREKAEELLLLPGNPGGAFLIRESQTRRGSYSLSVRLSRPASWDRIRHYRIHCLDNGWLY 159
Query: 144 ISPRLTFQCLEDLVNHYSE 162
ISPRLTF L+ LV+HYSE
Sbjct: 160 ISPRLTFPSLQALVDHYSE 178
>gi|33469982 B lymphoid tyrosine kinase [Homo sapiens]
Length = 505
Score = 142 bits (358), Expect = 3e-34
Identities = 83/180 (46%), Positives = 101/180 (56%), Gaps = 11/180 (6%)
Query: 15 PLPNPEGLDSD--FLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWKAISLSTGRESYI 72
P P E LD D F+ L DY + + +GEKL+V+ G WW A SL TGRE Y+
Sbjct: 49 PPPPDEHLDEDKHFVVALYDYTAMNDRDLQMLKGEKLQVLKGTGDWWLARSLVTGREGYV 108
Query: 73 PGICVARV----YHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRH-- 126
P VARV W F GR +AE L P K GSF+IRESET KG +SLSV+
Sbjct: 109 PSNFVARVESLEMERWFFRSQGRKEAERQLLAPINKAGSFLIRESETNKGAFSLSVKDVT 168
Query: 127 ---RQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAP 183
+KHY+I L YYISPR+TF L+ LV HYS+ DGLC LT PC+ + P
Sbjct: 169 TQGELIKHYKIRCLDEGGYYISPRITFPSLQALVQHYSKKGDGLCQRLTLPCVRPAPQNP 228
>gi|30795229 hemopoietic cell kinase isoform p61HCK [Homo sapiens]
Length = 526
Score = 137 bits (346), Expect = 8e-33
Identities = 77/173 (44%), Positives = 102/173 (58%), Gaps = 10/173 (5%)
Query: 21 GLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARV 80
G + + L DY + F++G+++ V+ + G WWKA SL+T +E YIP VARV
Sbjct: 77 GSEDIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARV 136
Query: 81 ----YHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRH---RQ---VK 130
W F+G+ R AE L P +GSFMIR+SET KG YSLSVR RQ VK
Sbjct: 137 DSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVK 196
Query: 131 HYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAP 183
HY+I L N +YISPR TF L++LV+HY + DGLC L+ PC++ P
Sbjct: 197 HYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSVPCMSSKPQKP 249
>gi|162287326 Yamaguchi sarcoma viral (v-yes-1) oncogene homolog
isoform B [Homo sapiens]
Length = 491
Score = 136 bits (342), Expect = 2e-32
Identities = 80/201 (39%), Positives = 109/201 (54%), Gaps = 22/201 (10%)
Query: 2 GNSMKSTPAPAERPLP-------NPEGLDSDFLAVLSDYPSPDISPP--IFRRGEKLRVI 52
G +K+ P P + LP +PE D + L YP I P F++GEK++V+
Sbjct: 16 GVDLKTQPVPESQLLPGQRFQTKDPEE-QGDIVVAL--YPYDGIHPDDLSFKKGEKMKVL 72
Query: 53 SDEGGWWKAISLSTGRESYIPGICVARVY----HGWLFEGLGRDKAEELLQLPDTKVGSF 108
+ G WWKA SL T +E +IP VA++ W F+ + R AE L P G+F
Sbjct: 73 EEHGEWWKAKSLLTKKEGFIPSNYVAKLNTLETEEWFFKDITRKDAERQLLAPGNSAGAF 132
Query: 109 MIRESETKKGFYSLSVRHRQ------VKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSE 162
+IRESET KG +SLSVR +KHY+I L N YYISPR+TF C+ D++ HY +
Sbjct: 133 LIRESETLKGSFSLSVRDFDPVHGDVIKHYKIRSLDNGGYYISPRITFPCISDMIKHYQK 192
Query: 163 VADGLCCVLTTPCLTQSTAAP 183
ADGLC L C++ P
Sbjct: 193 QADGLCRRLEKACISPKPQKP 213
>gi|112789548 lymphocyte-specific protein tyrosine kinase precursor
[Homo sapiens]
Length = 509
Score = 132 bits (333), Expect = 3e-31
Identities = 76/192 (39%), Positives = 100/192 (52%), Gaps = 10/192 (5%)
Query: 2 GNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWKA 61
G+ ++ E P L + + L Y F +GE+LR++ G WWKA
Sbjct: 41 GSEVRDPLVTYEGSNPPASPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKA 100
Query: 62 ISLSTGRESYIPGICVARVY----HGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKK 117
SL+TG+E +IP VA+ W F+ L R AE L P GSF+IRESE+
Sbjct: 101 QSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTA 160
Query: 118 GFYSLSVRH------RQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVL 171
G +SLSVR VKHY+I L N +YISPR+TF L +LV HY+ +DGLC L
Sbjct: 161 GSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRL 220
Query: 172 TTPCLTQSTAAP 183
+ PC TQ P
Sbjct: 221 SRPCQTQKPQKP 232
>gi|112789546 lymphocyte-specific protein tyrosine kinase precursor
[Homo sapiens]
Length = 509
Score = 132 bits (333), Expect = 3e-31
Identities = 76/192 (39%), Positives = 100/192 (52%), Gaps = 10/192 (5%)
Query: 2 GNSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWKA 61
G+ ++ E P L + + L Y F +GE+LR++ G WWKA
Sbjct: 41 GSEVRDPLVTYEGSNPPASPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKA 100
Query: 62 ISLSTGRESYIPGICVARVY----HGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKK 117
SL+TG+E +IP VA+ W F+ L R AE L P GSF+IRESE+
Sbjct: 101 QSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTA 160
Query: 118 GFYSLSVRH------RQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVL 171
G +SLSVR VKHY+I L N +YISPR+TF L +LV HY+ +DGLC L
Sbjct: 161 GSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRL 220
Query: 172 TTPCLTQSTAAP 183
+ PC TQ P
Sbjct: 221 SRPCQTQKPQKP 232
>gi|4505055 Yamaguchi sarcoma viral (v-yes-1) oncogene homolog
isoform A [Homo sapiens]
Length = 512
Score = 132 bits (333), Expect = 3e-31
Identities = 71/167 (42%), Positives = 97/167 (58%), Gaps = 12/167 (7%)
Query: 29 VLSDYPSPDISPP--IFRRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARV----YH 82
V++ YP I P F++GEK++V+ + G WWKA SL T +E +IP VA++
Sbjct: 68 VVALYPYDGIHPDDLSFKKGEKMKVLEEHGEWWKAKSLLTKKEGFIPSNYVAKLNTLETE 127
Query: 83 GWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRHRQ------VKHYRIFR 136
W F+ + R AE L P G+F+IRESET KG +SLSVR +KHY+I
Sbjct: 128 EWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDFDPVHGDVIKHYKIRS 187
Query: 137 LPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLTQSTAAP 183
L N YYISPR+TF C+ D++ HY + ADGLC L C++ P
Sbjct: 188 LDNGGYYISPRITFPCISDMIKHYQKQADGLCRRLEKACISPKPQKP 234
>gi|4885661 viral oncogene yes-1 homolog 1 [Homo sapiens]
Length = 543
Score = 126 bits (316), Expect = 2e-29
Identities = 75/176 (42%), Positives = 97/176 (55%), Gaps = 13/176 (7%)
Query: 15 PLPNPEGLDSD--FLAVLSDYPSPDISPPIFRRGEKLRVISD-EGGWWKAISLSTGRESY 71
P P GL L DY + F++GE+ ++I++ EG WW+A S++TG+ Y
Sbjct: 82 PSSYPAGLTGGVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKNGY 141
Query: 72 IPGICVARV----YHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRH- 126
IP VA W F +GR AE LL P + G F++RESET KG YSLS+R
Sbjct: 142 IPSNYVAPADSIQAEEWYFGKMGRKDAERLLLNPGNQRGIFLVRESETTKGAYSLSIRDW 201
Query: 127 -----RQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCLT 177
VKHY+I +L N YYI+ R F L+ LV HY+E ADGLC LTT C T
Sbjct: 202 DEIRGDNVKHYKIRKLDNGGYYITTRAQFDTLQKLVKHYTEHADGLCHKLTTVCPT 257
>gi|4503823 protein-tyrosine kinase fyn isoform a [Homo sapiens]
Length = 537
Score = 124 bits (310), Expect = 1e-28
Identities = 74/166 (44%), Positives = 89/166 (53%), Gaps = 11/166 (6%)
Query: 21 GLDSDFLAVLSDYPSPDISPPIFRRGEKLRVI-SDEGGWWKAISLSTGRESYIPGICVAR 79
G L DY + F +GEK +++ S EG WW+A SL+TG YIP VA
Sbjct: 81 GTGVTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAP 140
Query: 80 V----YHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRH------RQV 129
V W F LGR AE L G+F+IRESET KG YSLS+R V
Sbjct: 141 VDSIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHV 200
Query: 130 KHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPC 175
KHY+I +L N YYI+ R F+ L+ LV HYSE A GLCC L PC
Sbjct: 201 KHYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLCCRLVVPC 246
>gi|112382244 proto-oncogene tyrosine-protein kinase FGR [Homo
sapiens]
Length = 529
Score = 122 bits (305), Expect = 4e-28
Identities = 76/193 (39%), Positives = 101/193 (52%), Gaps = 16/193 (8%)
Query: 21 GLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISD-EGGWWKAISLSTGRESYIPGICVAR 79
G+ L DY + F +GEK ++++ EG WW+A SLS+G+ IP VA
Sbjct: 76 GIGVTLFIALYDYEARTEDDLTFTKGEKFHILNNTEGDWWEARSLSSGKTGCIPSNYVAP 135
Query: 80 V----YHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRH------RQV 129
V W F +GR AE L P G+F+IRESET KG YSLS+R V
Sbjct: 136 VDSIQAEEWYFGKIGRKDAERQLLSPGNPQGAFLIRESETTKGAYSLSIRDWDQTRGDHV 195
Query: 130 KHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCL-----TQSTAAPA 184
KHY+I +L YYI+ R+ F +++LV HY EV DGLC +L PC T A A
Sbjct: 196 KHYKIRKLDMGGYYITTRVQFNSVQELVQHYMEVNDGLCNLLIAPCTIMKPQTLGLAKDA 255
Query: 185 VRASSSPVTLRQK 197
S S +TL ++
Sbjct: 256 WEISRSSITLERR 268
>gi|112382241 proto-oncogene tyrosine-protein kinase FGR [Homo
sapiens]
Length = 529
Score = 122 bits (305), Expect = 4e-28
Identities = 76/193 (39%), Positives = 101/193 (52%), Gaps = 16/193 (8%)
Query: 21 GLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISD-EGGWWKAISLSTGRESYIPGICVAR 79
G+ L DY + F +GEK ++++ EG WW+A SLS+G+ IP VA
Sbjct: 76 GIGVTLFIALYDYEARTEDDLTFTKGEKFHILNNTEGDWWEARSLSSGKTGCIPSNYVAP 135
Query: 80 V----YHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRH------RQV 129
V W F +GR AE L P G+F+IRESET KG YSLS+R V
Sbjct: 136 VDSIQAEEWYFGKIGRKDAERQLLSPGNPQGAFLIRESETTKGAYSLSIRDWDQTRGDHV 195
Query: 130 KHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCL-----TQSTAAPA 184
KHY+I +L YYI+ R+ F +++LV HY EV DGLC +L PC T A A
Sbjct: 196 KHYKIRKLDMGGYYITTRVQFNSVQELVQHYMEVNDGLCNLLIAPCTIMKPQTLGLAKDA 255
Query: 185 VRASSSPVTLRQK 197
S S +TL ++
Sbjct: 256 WEISRSSITLERR 268
>gi|4885235 proto-oncogene tyrosine-protein kinase FGR [Homo
sapiens]
Length = 529
Score = 122 bits (305), Expect = 4e-28
Identities = 76/193 (39%), Positives = 101/193 (52%), Gaps = 16/193 (8%)
Query: 21 GLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISD-EGGWWKAISLSTGRESYIPGICVAR 79
G+ L DY + F +GEK ++++ EG WW+A SLS+G+ IP VA
Sbjct: 76 GIGVTLFIALYDYEARTEDDLTFTKGEKFHILNNTEGDWWEARSLSSGKTGCIPSNYVAP 135
Query: 80 V----YHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRH------RQV 129
V W F +GR AE L P G+F+IRESET KG YSLS+R V
Sbjct: 136 VDSIQAEEWYFGKIGRKDAERQLLSPGNPQGAFLIRESETTKGAYSLSIRDWDQTRGDHV 195
Query: 130 KHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPCL-----TQSTAAPA 184
KHY+I +L YYI+ R+ F +++LV HY EV DGLC +L PC T A A
Sbjct: 196 KHYKIRKLDMGGYYITTRVQFNSVQELVQHYMEVNDGLCNLLIAPCTIMKPQTLGLAKDA 255
Query: 185 VRASSSPVTLRQK 197
S S +TL ++
Sbjct: 256 WEISRSSITLERR 268
>gi|23510362 protein-tyrosine kinase fyn isoform b [Homo sapiens]
Length = 534
Score = 119 bits (298), Expect = 3e-27
Identities = 74/174 (42%), Positives = 93/174 (53%), Gaps = 14/174 (8%)
Query: 21 GLDSDFLAVLSDYPSPDISPPIFRRGEKLRVI-SDEGGWWKAISLSTGRESYIPGICVAR 79
G L DY + F +GEK +++ S EG WW+A SL+TG YIP VA
Sbjct: 81 GTGVTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAP 140
Query: 80 V----YHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRH------RQV 129
V W F LGR AE L G+F+IRESET KG YSLS+R V
Sbjct: 141 VDSIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHV 200
Query: 130 KHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLC---CVLTTPCLTQST 180
KHY+I +L N YYI+ R F+ L+ LV HYSE ADGLC V+ + C Q++
Sbjct: 201 KHYKIRKLDNGGYYITTRAQFETLQQLVQHYSEKADGLCFNLTVIASSCTPQTS 254
>gi|38202217 proto-oncogene tyrosine-protein kinase SRC [Homo
sapiens]
Length = 536
Score = 111 bits (277), Expect = 8e-25
Identities = 73/186 (39%), Positives = 104/186 (55%), Gaps = 14/186 (7%)
Query: 3 NSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISD-EGGWWKA 61
NS + +P +R P G+ + L DY S + F++GE+L+++++ EG WW A
Sbjct: 68 NSSDTVTSP-QRAGPLAGGVTT--FVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLA 124
Query: 62 ISLSTGRESYIPGICVARV----YHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKK 117
SLSTG+ YIP VA W F + R ++E LL + G+F++RESET K
Sbjct: 125 HSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTK 184
Query: 118 GFYSLSV------RHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVL 171
G Y LSV + VKHY+I +L + +YI+ R F L+ LV +YS+ ADGLC L
Sbjct: 185 GAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRL 244
Query: 172 TTPCLT 177
TT C T
Sbjct: 245 TTVCPT 250
>gi|4885609 proto-oncogene tyrosine-protein kinase SRC [Homo
sapiens]
Length = 536
Score = 111 bits (277), Expect = 8e-25
Identities = 73/186 (39%), Positives = 104/186 (55%), Gaps = 14/186 (7%)
Query: 3 NSMKSTPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISD-EGGWWKA 61
NS + +P +R P G+ + L DY S + F++GE+L+++++ EG WW A
Sbjct: 68 NSSDTVTSP-QRAGPLAGGVTT--FVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLA 124
Query: 62 ISLSTGRESYIPGICVARV----YHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKK 117
SLSTG+ YIP VA W F + R ++E LL + G+F++RESET K
Sbjct: 125 HSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTK 184
Query: 118 GFYSLSV------RHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVL 171
G Y LSV + VKHY+I +L + +YI+ R F L+ LV +YS+ ADGLC L
Sbjct: 185 GAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRL 244
Query: 172 TTPCLT 177
TT C T
Sbjct: 245 TTVCPT 250
>gi|4503787 fyn-related kinase [Homo sapiens]
Length = 505
Score = 109 bits (273), Expect = 2e-24
Identities = 79/220 (35%), Positives = 103/220 (46%), Gaps = 28/220 (12%)
Query: 7 STPAPAERPLPNPEGLDSD-------FLAVLSDYPSPDISPPIFRRGEKLRVISD-EGGW 58
ST A + NP L S + L DY + FR G+KL+V+ GW
Sbjct: 20 STEADKSTVIENPGALCSPQSQRHGHYFVALFDYQARTAEDLSFRAGDKLQVLDTLHEGW 79
Query: 59 WKAISLSTGRES-------YIPGICVAR----VYHGWLFEGLGRDKAEELLQLPDTKVGS 107
W A L R+ YIP VA W F +GR AE+ L + K GS
Sbjct: 80 WFARHLEKRRDGSSQQLQGYIPSNYVAEDRSLQAEPWFFGAIGRSDAEKQLLYSENKTGS 139
Query: 108 FMIRESETKKGFYSLSVRHRQV-KHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADG 166
F+IRESE++KG +SLSV V KHYRI RL ++++ R F L + V+HY++ +DG
Sbjct: 140 FLIRESESQKGEFSLSVLDGAVVKHYRIKRLDEGGFFLTRRRIFSTLNEFVSHYTKTSDG 199
Query: 167 LCCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDWRRVSR 206
LC L PCL A P L KTVD + R
Sbjct: 200 LCVKLGKPCLKIQVPA--------PFDLSYKTVDQWEIDR 231
>gi|23510364 protein-tyrosine kinase fyn isoform c [Homo sapiens]
Length = 482
Score = 105 bits (263), Expect = 3e-23
Identities = 66/157 (42%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 21 GLDSDFLAVLSDYPSPDISPPIFRRGEKLRVI-SDEGGWWKAISLSTGRESYIPGICVAR 79
G L DY + F +GEK +++ S EG WW+A SL+TG YIP VA
Sbjct: 81 GTGVTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAP 140
Query: 80 V----YHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRH------RQV 129
V W F LGR AE L G+F+IRESET KG YSLS+R V
Sbjct: 141 VDSIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHV 200
Query: 130 KHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADG 166
KHY+I +L N YYI+ R F+ L+ LV HYS +G
Sbjct: 201 KHYKIRKLDNGGYYITTRAQFETLQQLVQHYSGTWNG 237
>gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a
[Homo sapiens]
Length = 1130
Score = 75.1 bits (183), Expect = 6e-14
Identities = 55/168 (32%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
Query: 13 ERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVIS-DEGGWWKAISLSTGRESY 71
E L P D + L D+ + + +GEKLRV+ + G W G + +
Sbjct: 52 ENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNG-QGW 110
Query: 72 IPGICVARVY----HGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRHR 127
+P + V H W + R+ AE LL GSF++RESE+ G S+S+R+
Sbjct: 111 VPSNYITPVNSLEKHSWYHGPVSRNAAEYLLSSGIN--GSFLVRESESSPGQRSISLRYE 168
Query: 128 -QVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTP 174
+V HYRI + Y+S F L +LV+H+S VADGL L P
Sbjct: 169 GRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYP 216
>gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b
[Homo sapiens]
Length = 1149
Score = 75.1 bits (183), Expect = 6e-14
Identities = 55/168 (32%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
Query: 13 ERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVIS-DEGGWWKAISLSTGRESY 71
E L P D + L D+ + + +GEKLRV+ + G W G + +
Sbjct: 71 ENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNG-QGW 129
Query: 72 IPGICVARVY----HGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRHR 127
+P + V H W + R+ AE LL GSF++RESE+ G S+S+R+
Sbjct: 130 VPSNYITPVNSLEKHSWYHGPVSRNAAEYLLSSGIN--GSFLVRESESSPGQRSISLRYE 187
Query: 128 -QVKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTP 174
+V HYRI + Y+S F L +LV+H+S VADGL L P
Sbjct: 188 GRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYP 235
>gi|153266778 arg tyrosine kinase isoform c [Homo sapiens]
Length = 1167
Score = 73.9 bits (180), Expect = 1e-13
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 23 DSDFLAVLSDYPSPDISPPIFRRGEKLRVIS-DEGGWWKAISLSTGRESYIPGICVARVY 81
D + L D+ + + +GEKLRV+ ++ G W + G + ++P + V
Sbjct: 93 DPNLFVALYDFVASGDNTLSITKGEKLRVLGYNQNGEWSEVRSKNG-QGWVPSNYITPVN 151
Query: 82 ----HGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRHR-QVKHYRIFR 136
H W + R AE LL GSF++RESE+ G S+S+R+ +V HYRI
Sbjct: 152 SLEKHSWYHGPVSRSAAEYLLS--SLINGSFLVRESESSPGQLSISLRYEGRVYHYRINT 209
Query: 137 LPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTP 174
+ Y++ F L +LV+H+S VADGL L P
Sbjct: 210 TADGKVYVTAESRFSTLAELVHHHSTVADGLVTTLHYP 247
>gi|6382062 arg tyrosine kinase isoform b [Homo sapiens]
Length = 1182
Score = 73.9 bits (180), Expect = 1e-13
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 23 DSDFLAVLSDYPSPDISPPIFRRGEKLRVIS-DEGGWWKAISLSTGRESYIPGICVARVY 81
D + L D+ + + +GEKLRV+ ++ G W + G + ++P + V
Sbjct: 108 DPNLFVALYDFVASGDNTLSITKGEKLRVLGYNQNGEWSEVRSKNG-QGWVPSNYITPVN 166
Query: 82 ----HGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRHR-QVKHYRIFR 136
H W + R AE LL GSF++RESE+ G S+S+R+ +V HYRI
Sbjct: 167 SLEKHSWYHGPVSRSAAEYLLS--SLINGSFLVRESESSPGQLSISLRYEGRVYHYRINT 224
Query: 137 LPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTP 174
+ Y++ F L +LV+H+S VADGL L P
Sbjct: 225 TADGKVYVTAESRFSTLAELVHHHSTVADGLVTTLHYP 262
>gi|209862778 arg tyrosine kinase isoform e [Homo sapiens]
Length = 542
Score = 73.9 bits (180), Expect = 1e-13
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 23 DSDFLAVLSDYPSPDISPPIFRRGEKLRVIS-DEGGWWKAISLSTGRESYIPGICVARVY 81
D + L D+ + + +GEKLRV+ ++ G W + G + ++P + V
Sbjct: 87 DPNLFVALYDFVASGDNTLSITKGEKLRVLGYNQNGEWSEVRSKNG-QGWVPSNYITPVN 145
Query: 82 ----HGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRHR-QVKHYRIFR 136
H W + R AE LL GSF++RESE+ G S+S+R+ +V HYRI
Sbjct: 146 SLEKHSWYHGPVSRSAAEYLLS--SLINGSFLVRESESSPGQLSISLRYEGRVYHYRINT 203
Query: 137 LPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTP 174
+ Y++ F L +LV+H+S VADGL L P
Sbjct: 204 TADGKVYVTAESRFSTLAELVHHHSTVADGLVTTLHYP 241
>gi|209862772 arg tyrosine kinase isoform d [Homo sapiens]
Length = 1064
Score = 73.9 bits (180), Expect = 1e-13
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 23 DSDFLAVLSDYPSPDISPPIFRRGEKLRVIS-DEGGWWKAISLSTGRESYIPGICVARVY 81
D + L D+ + + +GEKLRV+ ++ G W + G + ++P + V
Sbjct: 93 DPNLFVALYDFVASGDNTLSITKGEKLRVLGYNQNGEWSEVRSKNG-QGWVPSNYITPVN 151
Query: 82 ----HGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRHR-QVKHYRIFR 136
H W + R AE LL GSF++RESE+ G S+S+R+ +V HYRI
Sbjct: 152 SLEKHSWYHGPVSRSAAEYLLS--SLINGSFLVRESESSPGQLSISLRYEGRVYHYRINT 209
Query: 137 LPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTP 174
+ Y++ F L +LV+H+S VADGL L P
Sbjct: 210 TADGKVYVTAESRFSTLAELVHHHSTVADGLVTTLHYP 247
>gi|153266757 arg tyrosine kinase isoform a [Homo sapiens]
Length = 1146
Score = 73.9 bits (180), Expect = 1e-13
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 23 DSDFLAVLSDYPSPDISPPIFRRGEKLRVIS-DEGGWWKAISLSTGRESYIPGICVARVY 81
D + L D+ + + +GEKLRV+ ++ G W + G + ++P + V
Sbjct: 72 DPNLFVALYDFVASGDNTLSITKGEKLRVLGYNQNGEWSEVRSKNG-QGWVPSNYITPVN 130
Query: 82 ----HGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSLSVRHR-QVKHYRIFR 136
H W + R AE LL GSF++RESE+ G S+S+R+ +V HYRI
Sbjct: 131 SLEKHSWYHGPVSRSAAEYLLS--SLINGSFLVRESESSPGQLSISLRYEGRVYHYRINT 188
Query: 137 LPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTP 174
+ Y++ F L +LV+H+S VADGL L P
Sbjct: 189 TADGKVYVTAESRFSTLAELVHHHSTVADGLVTTLHYP 226
>gi|15718680 IL2-inducible T-cell kinase [Homo sapiens]
Length = 620
Score = 68.2 bits (165), Expect = 8e-12
Identities = 59/193 (30%), Positives = 86/193 (44%), Gaps = 23/193 (11%)
Query: 8 TPAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVI-SDEGGWWKAISLST 66
TP RPL PE + L DY + D RR E+ ++ S E WW+ +
Sbjct: 160 TPEDNRRPLWEPE---ETVVIALYDYQTNDPQELALRRNEEYCLLDSSEIHWWR-VQDRN 215
Query: 67 GRESYIPGICVAR------VYHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFY 120
G E Y+P + + W + + RDKAE+LL L K G+FM+R+S T G Y
Sbjct: 216 GHEGYVPSSYLVEKSPNNLETYEWYNKSISRDKAEKLL-LDTGKEGAFMVRDSRT-AGTY 273
Query: 121 SLSVRHRQV--------KHYRIFRLPNN--WYYISPRLTFQCLEDLVNHYSEVADGLCCV 170
++SV + V KHY I +N YY++ + F + L+N++ GL
Sbjct: 274 TVSVFTKAVVSENNPCIKHYHIKETNDNPKRYYVAEKYVFDSIPLLINYHQHNGGGLVTR 333
Query: 171 LTTPCLTQSTAAP 183
L P AP
Sbjct: 334 LRYPVCFGRQKAP 346
>gi|4557377 Bruton agammaglobulinemia tyrosine kinase [Homo sapiens]
Length = 659
Score = 67.8 bits (164), Expect = 1e-11
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 19/189 (10%)
Query: 9 PAPAERPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEG-GWWKAISLSTG 67
P PA P+ E + L DY + + R+G++ ++ + WW+A G
Sbjct: 204 PEPAAAPVSTSE---LKKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARD-KNG 259
Query: 68 RESYIPGICVARV-----YHGWLFEGLGRDKAEELLQLPDTKVGSFMIRESETKKGFYSL 122
+E YIP V + W + + R +AE+LL+ + K G F++R+S +K G Y++
Sbjct: 260 QEGYIPSNYVTEAEDSIEMYEWYSKHMTRSQAEQLLK-QEGKEGGFIVRDS-SKAGKYTV 317
Query: 123 SVRHRQ-------VKHYRIFRLPNNWYYISPRLTFQCLEDLVNHYSEVADGLCCVLTTPC 175
SV + ++HY + P + YY++ + F + +L+N++ + GL L P
Sbjct: 318 SVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPELINYHQHNSAGLISRLKYPV 377
Query: 176 LTQSTAAPA 184
Q+ AP+
Sbjct: 378 SQQNKNAPS 386
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,540,458
Number of Sequences: 37866
Number of extensions: 543878
Number of successful extensions: 1848
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 1687
Number of HSP's gapped (non-prelim): 175
length of query: 276
length of database: 18,247,518
effective HSP length: 101
effective length of query: 175
effective length of database: 14,423,052
effective search space: 2524034100
effective search space used: 2524034100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.