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Search of human proteins with 21361440
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21361440 RAB3A interacting protein (rabin3)-like 1 [Homo
sapiens]
(382 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21361440 RAB3A interacting protein (rabin3)-like 1 [Homo sapi... 766 0.0
gi|41281856 RAB3A interacting protein isoform alpha 2 [Homo sapi... 380 e-105
gi|28274699 RAB3A interacting protein isoform alpha 1 [Homo sapi... 380 e-105
gi|66912194 RAB3A interacting protein isoform A [Homo sapiens] 287 1e-77
gi|41281862 RAB3A interacting protein isoform beta 2 [Homo sapiens] 259 2e-69
gi|41281871 RAB3A interacting protein isoform beta 1 [Homo sapiens] 259 2e-69
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 48 1e-05
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 44 2e-04
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa... 42 7e-04
gi|153945715 myosin VC [Homo sapiens] 42 0.001
gi|18390344 ATR interacting protein isoform 2 [Homo sapiens] 42 0.001
gi|18390347 ATR interacting protein isoform 1 [Homo sapiens] 42 0.001
gi|58530840 desmoplakin isoform I [Homo sapiens] 41 0.002
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 41 0.002
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 41 0.002
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 41 0.002
gi|4504063 golgin 97 [Homo sapiens] 41 0.002
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 40 0.003
gi|58530842 desmoplakin isoform II [Homo sapiens] 40 0.003
gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... 40 0.003
gi|148746195 trichohyalin [Homo sapiens] 40 0.004
gi|92859701 myosin VI [Homo sapiens] 40 0.004
gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapi... 40 0.004
gi|45439327 periplakin [Homo sapiens] 40 0.004
gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi... 40 0.004
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 39 0.006
gi|110347443 TATA element modulatory factor 1 [Homo sapiens] 39 0.006
gi|91208420 bassoon protein [Homo sapiens] 39 0.006
gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo sa... 39 0.006
gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo sap... 39 0.006
>gi|21361440 RAB3A interacting protein (rabin3)-like 1 [Homo
sapiens]
Length = 382
Score = 766 bits (1978), Expect = 0.0
Identities = 382/382 (100%), Positives = 382/382 (100%)
Query: 1 MWSGPPQPDQGLPPPLAAVPVPWKSTDPCQGHRESPGALVETSAGEEAQGQEGPAAAQLD 60
MWSGPPQPDQGLPPPLAAVPVPWKSTDPCQGHRESPGALVETSAGEEAQGQEGPAAAQLD
Sbjct: 1 MWSGPPQPDQGLPPPLAAVPVPWKSTDPCQGHRESPGALVETSAGEEAQGQEGPAAAQLD 60
Query: 61 VLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFE 120
VLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFE
Sbjct: 61 VLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFE 120
Query: 121 EAHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALKTLVITSTPASPNRELHPQLLSP 180
EAHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALKTLVITSTPASPNRELHPQLLSP
Sbjct: 121 EAHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALKTLVITSTPASPNRELHPQLLSP 180
Query: 181 TKAGPRKGHSRHKSTSSTLCPAVCPAAGHTLTPDREGKEVDTILFAEFQAWRESPTLDKT 240
TKAGPRKGHSRHKSTSSTLCPAVCPAAGHTLTPDREGKEVDTILFAEFQAWRESPTLDKT
Sbjct: 181 TKAGPRKGHSRHKSTSSTLCPAVCPAAGHTLTPDREGKEVDTILFAEFQAWRESPTLDKT 240
Query: 241 CPFLERVYREDVGPCLDFTMQELSVLVRAAVEDNTLTIEPVASQTLPTVKVAEVDCSSTN 300
CPFLERVYREDVGPCLDFTMQELSVLVRAAVEDNTLTIEPVASQTLPTVKVAEVDCSSTN
Sbjct: 241 CPFLERVYREDVGPCLDFTMQELSVLVRAAVEDNTLTIEPVASQTLPTVKVAEVDCSSTN 300
Query: 301 TCALSGLTRTCRHRIRLGDSKSHYYISPSSRARITAVCNFFTYIRYIQQGLVRQDAEPMF 360
TCALSGLTRTCRHRIRLGDSKSHYYISPSSRARITAVCNFFTYIRYIQQGLVRQDAEPMF
Sbjct: 301 TCALSGLTRTCRHRIRLGDSKSHYYISPSSRARITAVCNFFTYIRYIQQGLVRQDAEPMF 360
Query: 361 WEIMRLRKEMSLAKLGFFPQEA 382
WEIMRLRKEMSLAKLGFFPQEA
Sbjct: 361 WEIMRLRKEMSLAKLGFFPQEA 382
>gi|41281856 RAB3A interacting protein isoform alpha 2 [Homo
sapiens]
Length = 476
Score = 380 bits (975), Expect = e-105
Identities = 198/322 (61%), Positives = 253/322 (78%), Gaps = 9/322 (2%)
Query: 63 RLRSSS-MEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEE 121
RLRS S +E+REKG E LKEEL +AQ+ELKLKDEECERLSKVR+QL QELEELTASLFEE
Sbjct: 160 RLRSPSVLEVREKGYERLKEELAKAQRELKLKDEECERLSKVRDQLGQELEELTASLFEE 219
Query: 122 AHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALKTLVITSTPASPNRELHPQLLSPT 181
AHKMVREAN+KQA +EKQLKEA+GKID+LQAEV ALKTLV++S+P SP +E P +P
Sbjct: 220 AHKMVREANIKQATAEKQLKEAQGKIDVLQAEVAALKTLVLSSSPTSPTQEPLPGGKTPF 279
Query: 182 KAGPRKGHSRHKSTSSTLCPAVCPAAGHTLTPD-REGKEVDTILFAEFQAWRESPTLDKT 240
K KGH+R+KSTSS + + + + P ++ KE D L+ EF+ W++ PT+D+T
Sbjct: 280 K----KGHTRNKSTSSAMSGSHQDLS--VIQPIVKDCKEADLSLYNEFRLWKDEPTMDRT 333
Query: 241 CPFLERVYREDVGPCLDFTMQELSVLVRAAVEDNTLTIEPVASQTLPTVKVAEVDCSSTN 300
CPFL+++Y+ED+ PCL F+ EL+ V AVE+NTL+IEPV Q + VK + V+C
Sbjct: 334 CPFLDKIYQEDIFPCLTFSKSELASAVLEAVENNTLSIEPVGLQPIRFVKASAVECGGPK 393
Query: 301 TCALSGLTRTCRHRIRLGDSKSHYYISPSSRARITAVCNFFTYIRYIQQGLVR-QDAEPM 359
CAL+G +++C+HRI+LGDS ++YYISP R RIT+VCNFFTYIRYIQQGLV+ QD + M
Sbjct: 394 KCALTGQSKSCKHRIKLGDSSNYYYISPFCRYRITSVCNFFTYIRYIQQGLVKQQDVDQM 453
Query: 360 FWEIMRLRKEMSLAKLGFFPQE 381
FWE+M+LRKEMSLAKLG+F +E
Sbjct: 454 FWEVMQLRKEMSLAKLGYFKEE 475
>gi|28274699 RAB3A interacting protein isoform alpha 1 [Homo
sapiens]
Length = 460
Score = 380 bits (975), Expect = e-105
Identities = 198/322 (61%), Positives = 253/322 (78%), Gaps = 9/322 (2%)
Query: 63 RLRSSS-MEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEE 121
RLRS S +E+REKG E LKEEL +AQ+ELKLKDEECERLSKVR+QL QELEELTASLFEE
Sbjct: 144 RLRSPSVLEVREKGYERLKEELAKAQRELKLKDEECERLSKVRDQLGQELEELTASLFEE 203
Query: 122 AHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALKTLVITSTPASPNRELHPQLLSPT 181
AHKMVREAN+KQA +EKQLKEA+GKID+LQAEV ALKTLV++S+P SP +E P +P
Sbjct: 204 AHKMVREANIKQATAEKQLKEAQGKIDVLQAEVAALKTLVLSSSPTSPTQEPLPGGKTPF 263
Query: 182 KAGPRKGHSRHKSTSSTLCPAVCPAAGHTLTPD-REGKEVDTILFAEFQAWRESPTLDKT 240
K KGH+R+KSTSS + + + + P ++ KE D L+ EF+ W++ PT+D+T
Sbjct: 264 K----KGHTRNKSTSSAMSGSHQDLS--VIQPIVKDCKEADLSLYNEFRLWKDEPTMDRT 317
Query: 241 CPFLERVYREDVGPCLDFTMQELSVLVRAAVEDNTLTIEPVASQTLPTVKVAEVDCSSTN 300
CPFL+++Y+ED+ PCL F+ EL+ V AVE+NTL+IEPV Q + VK + V+C
Sbjct: 318 CPFLDKIYQEDIFPCLTFSKSELASAVLEAVENNTLSIEPVGLQPIRFVKASAVECGGPK 377
Query: 301 TCALSGLTRTCRHRIRLGDSKSHYYISPSSRARITAVCNFFTYIRYIQQGLVR-QDAEPM 359
CAL+G +++C+HRI+LGDS ++YYISP R RIT+VCNFFTYIRYIQQGLV+ QD + M
Sbjct: 378 KCALTGQSKSCKHRIKLGDSSNYYYISPFCRYRITSVCNFFTYIRYIQQGLVKQQDVDQM 437
Query: 360 FWEIMRLRKEMSLAKLGFFPQE 381
FWE+M+LRKEMSLAKLG+F +E
Sbjct: 438 FWEVMQLRKEMSLAKLGYFKEE 459
>gi|66912194 RAB3A interacting protein isoform A [Homo sapiens]
Length = 254
Score = 287 bits (734), Expect = 1e-77
Identities = 146/259 (56%), Positives = 196/259 (75%), Gaps = 8/259 (3%)
Query: 125 MVREANMKQAASEKQLKEARGKIDMLQAEVTALKTLVITSTPASPNRELHPQLLSPTKAG 184
MVREAN+KQA +EKQLKEA+GKID+LQAEV ALKTLV++S+P SP +E P +P K
Sbjct: 1 MVREANIKQATAEKQLKEAQGKIDVLQAEVAALKTLVLSSSPTSPTQEPLPGGKTPFK-- 58
Query: 185 PRKGHSRHKSTSSTLCPAVCPAAGHTLTPD-REGKEVDTILFAEFQAWRESPTLDKTCPF 243
KGH+R+KSTSS + + + + P ++ KE D L+ EF+ W++ PT+D+TCPF
Sbjct: 59 --KGHTRNKSTSSAMSGSHQDLS--VIQPIVKDCKEADLSLYNEFRLWKDEPTMDRTCPF 114
Query: 244 LERVYREDVGPCLDFTMQELSVLVRAAVEDNTLTIEPVASQTLPTVKVAEVDCSSTNTCA 303
L+++Y+ED+ PCL F+ EL+ V AVE+NTL+IEPV Q + VK + V+C CA
Sbjct: 115 LDKIYQEDIFPCLTFSKSELASAVLEAVENNTLSIEPVGLQPIRFVKASAVECGGPKKCA 174
Query: 304 LSGLTRTCRHRIRLGDSKSHYYISPSSRARITAVCNFFTYIRYIQQGLVR-QDAEPMFWE 362
L+G +++C+HRI+LGDS ++YYISP R RIT+VCNFFTYIRYIQQGLV+ QD + MFWE
Sbjct: 175 LTGQSKSCKHRIKLGDSSNYYYISPFCRYRITSVCNFFTYIRYIQQGLVKQQDVDQMFWE 234
Query: 363 IMRLRKEMSLAKLGFFPQE 381
+M+LRKEMSLAKLG+F +E
Sbjct: 235 VMQLRKEMSLAKLGYFKEE 253
>gi|41281862 RAB3A interacting protein isoform beta 2 [Homo sapiens]
Length = 411
Score = 259 bits (663), Expect = 2e-69
Identities = 141/236 (59%), Positives = 181/236 (76%), Gaps = 8/236 (3%)
Query: 63 RLRSSS-MEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEE 121
RLRS S +E+REKG E LKEEL +AQ+ELKLKDEECERLSKVR+QL QELEELTASLFEE
Sbjct: 160 RLRSPSVLEVREKGYERLKEELAKAQRELKLKDEECERLSKVRDQLGQELEELTASLFEE 219
Query: 122 AHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALKTLVITSTPASPNRELHPQLLSPT 181
AHKMVREAN+KQA +EKQLKEA+GKID+LQAEV ALKTLV++S+P SP +E P +P
Sbjct: 220 AHKMVREANIKQATAEKQLKEAQGKIDVLQAEVAALKTLVLSSSPTSPTQEPLPGGKTPF 279
Query: 182 KAGPRKGHSRHKSTSSTLCPAVCPAAGHTLTP-DREGKEVDTILFAEFQAWRESPTLDKT 240
K KGH+R+KSTSS + + + + P ++ KE D L+ EF+ W++ PT+D+T
Sbjct: 280 K----KGHTRNKSTSSAMSGSHQDLS--VIQPIVKDCKEADLSLYNEFRLWKDEPTMDRT 333
Query: 241 CPFLERVYREDVGPCLDFTMQELSVLVRAAVEDNTLTIEPVASQTLPTVKVAEVDC 296
CPFL+++Y+ED+ PCL F+ EL+ V AVE+NTL+IEPV Q + VK + V+C
Sbjct: 334 CPFLDKIYQEDIFPCLTFSKSELASAVLEAVENNTLSIEPVGLQPIRFVKASAVEC 389
>gi|41281871 RAB3A interacting protein isoform beta 1 [Homo sapiens]
Length = 395
Score = 259 bits (663), Expect = 2e-69
Identities = 141/236 (59%), Positives = 181/236 (76%), Gaps = 8/236 (3%)
Query: 63 RLRSSS-MEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEE 121
RLRS S +E+REKG E LKEEL +AQ+ELKLKDEECERLSKVR+QL QELEELTASLFEE
Sbjct: 144 RLRSPSVLEVREKGYERLKEELAKAQRELKLKDEECERLSKVRDQLGQELEELTASLFEE 203
Query: 122 AHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALKTLVITSTPASPNRELHPQLLSPT 181
AHKMVREAN+KQA +EKQLKEA+GKID+LQAEV ALKTLV++S+P SP +E P +P
Sbjct: 204 AHKMVREANIKQATAEKQLKEAQGKIDVLQAEVAALKTLVLSSSPTSPTQEPLPGGKTPF 263
Query: 182 KAGPRKGHSRHKSTSSTLCPAVCPAAGHTLTP-DREGKEVDTILFAEFQAWRESPTLDKT 240
K KGH+R+KSTSS + + + + P ++ KE D L+ EF+ W++ PT+D+T
Sbjct: 264 K----KGHTRNKSTSSAMSGSHQDLS--VIQPIVKDCKEADLSLYNEFRLWKDEPTMDRT 317
Query: 241 CPFLERVYREDVGPCLDFTMQELSVLVRAAVEDNTLTIEPVASQTLPTVKVAEVDC 296
CPFL+++Y+ED+ PCL F+ EL+ V AVE+NTL+IEPV Q + VK + V+C
Sbjct: 318 CPFLDKIYQEDIFPCLTFSKSELASAVLEAVENNTLSIEPVGLQPIRFVKASAVEC 373
>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
sapiens]
Length = 1130
Score = 48.1 bits (113), Expect = 1e-05
Identities = 59/224 (26%), Positives = 86/224 (38%), Gaps = 24/224 (10%)
Query: 5 PPQPDQGLPPPLAAVPVPWKSTDPCQGHRESPGALVETSAGEEAQGQEGPAAAQLDVLRL 64
P P PPP PVP T P P LV E G GP A + D+ +
Sbjct: 833 PAAPGPLPPPPPPPPPVPGPVTLP-------PPQLVP----EGTPGGGGPPALEEDLTVI 881
Query: 65 RSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEAHK 124
+S + E+ E +EE ++E + +EE E + E+ E+E EE EE +
Sbjct: 882 NINSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGE 941
Query: 125 MVREANMKQAASEKQLKEARG-KIDMLQAEVTALKTLVITSTPASPNRELHPQL------ 177
+ E + E++L+E + EV T PA P E P++
Sbjct: 942 LEEEEEEEDEEEEEELEEVEDLEFGTAGGEVEEGAPPPPTLPPALPPPESPPKVQPEPEP 1001
Query: 178 ---LSPTKAGPRKGHSRHKSTSSTLCPAVCPAAGHTLTPDREGK 218
L P R T+ TL P P+ G +REG+
Sbjct: 1002 EPGLLLEVEEPGTEEERGADTAPTLAPEALPSQGEV---EREGE 1042
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 73 EKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEAHKMVREANMK 132
E+ + L + L A++ + + +C L K +++L+ E+E+L L E +H + K
Sbjct: 1391 EEAKKKLAQRLQEAEENTETANSKCASLEKTKQRLQGEVEDLMRDL-ERSHTACATLDKK 1449
Query: 133 QAASEKQLKEARGKIDMLQAEVTA 156
Q +K L E + K+D QAE+ A
Sbjct: 1450 QRNFDKVLAEWKQKLDESQAELEA 1473
Score = 34.7 bits (78), Expect = 0.15
Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 79 LKEELHRAQK----ELKLKDEECERLSKVREQLEQELEELTASLFEEAHKMVREANMKQA 134
L+ +L RA++ +LK+ E L ++Q+E++L++ L + + + +
Sbjct: 1048 LRADLERAKRKLEGDLKMSQESIMDLENDKQQIEEKLKKKEFEL-SQLQAKIDDEQVHSL 1106
Query: 135 ASEKQLKEARGKIDMLQAEVTALKTL 160
+K++KE + +I+ L+ E+ A TL
Sbjct: 1107 QFQKKIKELQARIEELEEEIEAEHTL 1132
Score = 33.5 bits (75), Expect = 0.33
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 60 DVLRLRSSSMEIREKGSEFLKE------ELHRAQKELKLKDEECERLSKVREQLEQELEE 113
++ R + E+ EK L+E ++ + L +E CE L K + LE +++E
Sbjct: 866 ELARSEARRKELEEKMVSLLQEKNDLQLQVQSETENLMDAEERCEGLIKSKILLEAKVKE 925
Query: 114 LTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALK 158
LT L EE +M E K+ E + + ID L+ +T ++
Sbjct: 926 LTERL-EEEEEMNSELVAKKRNLEDKCSSLKRDIDDLELTLTKVE 969
Score = 32.3 bits (72), Expect = 0.73
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 55 AAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEEL 114
A Q +V S EK + + + A+ ELK + + L ++++ LEQ +++L
Sbjct: 1739 AQCQAEVENSIQESRNAEEKAKKAITDAAMMAE-ELKKEQDTSAHLERMKKNLEQTVKDL 1797
Query: 115 TASLFEEAHKMVREANMKQAAS-EKQLKEARGKIDMLQ 151
L +EA ++ + KQ E +++E ++D+ Q
Sbjct: 1798 QHRL-DEAEQLALKGGKKQIQKLENRVRELENELDVEQ 1834
>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
sapiens]
Length = 631
Score = 42.4 bits (98), Expect = 7e-04
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 10/124 (8%)
Query: 41 ETSAGEEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERL 100
E SA + Q QE AA Q+ + + + + +E+ + ++ K+EE RL
Sbjct: 291 EMSASDTRQRQEWTAAIQMAIRLQAEGKTSLHKDLKQKRREQREQRERRRAAKEEELLRL 350
Query: 101 SKVREQLEQELEEL----------TASLFEEAHKMVREANMKQAASEKQLKEARGKIDML 150
+++E+ E++L+EL L EE + + Q A E QL+EA +
Sbjct: 351 QQLQEEKERKLQELELLQEAQRQAERLLQEEEERRRSQHRELQQALEGQLREAEQARASM 410
Query: 151 QAEV 154
QAE+
Sbjct: 411 QAEM 414
Score = 39.7 bits (91), Expect = 0.005
Identities = 27/111 (24%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 47 EAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEE---CERLSKV 103
E Q A QL+V + R +R + L+EE + ++ ++LK+E+ ER +
Sbjct: 432 EEMQQRLQEALQLEV-KARRDEESVRIAQTRLLEEEEEKLKQLMQLKEEQERYIERAQQE 490
Query: 104 REQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAEV 154
+E+L+QE+ + + SL ++A + + E + +++ ++ A+ K+ V
Sbjct: 491 KEELQQEMAQQSRSL-QQAQQQLEEVRQNRQRADEDVEAAQRKLRQASTNV 540
Score = 31.6 bits (70), Expect = 1.2
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 30 QGHRESPGALVETSAGEEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKE-ELHRA-- 86
Q E L E +EAQ Q Q + R RS E+++ L+E E RA
Sbjct: 352 QLQEEKERKLQELELLQEAQRQ-AERLLQEEEERRRSQHRELQQALEGQLREAEQARASM 410
Query: 87 QKELKLKDEECERLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGK 146
Q E++LK+EE R + ++LE+ + L +L E K R+ + A + L+E K
Sbjct: 411 QAEMELKEEEAARQRQRIKELEEMQQRLQEALQLEV-KARRDEESVRIAQTRLLEEEEEK 469
Query: 147 IDML 150
+ L
Sbjct: 470 LKQL 473
>gi|153945715 myosin VC [Homo sapiens]
Length = 1742
Score = 42.0 bits (97), Expect = 0.001
Identities = 26/93 (27%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Query: 73 EKGSEF---LKEELHRAQK---ELKLKDEECE-RLSKVREQLEQELEELTASLFEEAHKM 125
EKG + ++E+L + QK EL+ + E+ + +L + E+L+++++ LT LF++ K
Sbjct: 945 EKGKRYRDAVEEKLAKLQKHNSELETQKEQIQLKLQEKTEELKEKMDNLTKQLFDDVQKE 1004
Query: 126 VREANMKQAASEKQLKEARGKIDMLQAEVTALK 158
R+ + + + E + ++ +I L+ E+ ALK
Sbjct: 1005 ERQRMLLEKSFELKTQDYEKQIQSLKEEIKALK 1037
>gi|18390344 ATR interacting protein isoform 2 [Homo sapiens]
Length = 764
Score = 41.6 bits (96), Expect = 0.001
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Query: 69 MEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEAHKMVRE 128
+E+ + + LKE++ ++E+ +K+ E + L Q E LEE S F + +
Sbjct: 114 LEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQA 173
Query: 129 ANMKQAASEKQLKEARGKIDMLQAEVTALKTLVITSTPASPNRELHPQLLSPTKAGPRKG 188
+ K+ K+L+ + ++ AE+ L+T + TS A+ A P
Sbjct: 174 LSDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERAN------------KLAAPSVS 221
Query: 189 H-SRHKSTSSTLCPAVC-PAAGHTLTPDRE 216
H S K+ S + P C P G T P +E
Sbjct: 222 HVSPRKNPSVVIKPEACSPQFGKTSFPTKE 251
>gi|18390347 ATR interacting protein isoform 1 [Homo sapiens]
Length = 791
Score = 41.6 bits (96), Expect = 0.001
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Query: 69 MEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEAHKMVRE 128
+E+ + + LKE++ ++E+ +K+ E + L Q E LEE S F + +
Sbjct: 114 LEVLQAQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQA 173
Query: 129 ANMKQAASEKQLKEARGKIDMLQAEVTALKTLVITSTPASPNRELHPQLLSPTKAGPRKG 188
+ K+ K+L+ + ++ AE+ L+T + TS A+ A P
Sbjct: 174 LSDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERAN------------KLAAPSVS 221
Query: 189 H-SRHKSTSSTLCPAVC-PAAGHTLTPDRE 216
H S K+ S + P C P G T P +E
Sbjct: 222 HVSPRKNPSVVIKPEACSPQFGKTSFPTKE 251
>gi|58530840 desmoplakin isoform I [Homo sapiens]
Length = 2871
Score = 41.2 bits (95), Expect = 0.002
Identities = 25/121 (20%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Query: 38 ALVETSAGEEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEEC 97
AL ++ +E++ Q + + L ++ +E + + L++EL+RA+ L+ +
Sbjct: 1791 ALEASNRIQESKNQCTQVVQERESLLVKIKVLEQDKARLQRLEDELNRAKSTLEAETRVK 1850
Query: 98 ERLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAEVTAL 157
+RL ++Q++ +L + + + +R+ ++ SE++ R +I+ LQAE+ +
Sbjct: 1851 QRLECEKQQIQNDLNQWKTQ-YSRKEEAIRKIESEREKSEREKNSLRSEIERLQAEIKRI 1909
Query: 158 K 158
+
Sbjct: 1910 E 1910
Score = 35.0 bits (79), Expect = 0.11
Identities = 26/95 (27%), Positives = 55/95 (57%), Gaps = 14/95 (14%)
Query: 60 DVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLF 119
D+ R ++S E++ + + ++EEL+R ++ ++ C+R ++LE+ELE + SL
Sbjct: 1555 DITRFQNSLKELQLQKQK-VEEELNRLKRTAS--EDSCKR-----KKLEEELEGMRRSLK 1606
Query: 120 EEAHKM------VREANMKQAASEKQLKEARGKID 148
E+A K+ + +A++ + SE L++ R +D
Sbjct: 1607 EQAIKITNLTQQLEQASIVKKRSEDDLRQQRDVLD 1641
Score = 31.2 bits (69), Expect = 1.6
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 60 DVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECER-----LSKVREQLEQELEEL 114
+ +R S E E+ L+ E+ R Q E+K +E C R + + QLE E
Sbjct: 1876 EAIRKIESEREKSEREKNSLRSEIERLQAEIKRIEERCRRKLEDSTRETQSQLETERSRY 1935
Query: 115 TASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALK 158
+ + + Q E + ++ D L+ +VTA++
Sbjct: 1936 QREIDKLRQRPYGSHRETQTECEWTVDTSKLVFDGLRKKVTAMQ 1979
Score = 29.3 bits (64), Expect = 6.2
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 57 AQLDVLRL--RSSSMEIREKGSEFLK--EELHRAQKELKLKDEECERLSKVREQLEQELE 112
AQ+D L RS S EI+ + + E L R +++++ + +S+ ++QLE EL
Sbjct: 1393 AQIDNLTRENRSLSEEIKRLKNTLTQTTENLRRVEEDIQQQKATGSEVSQRKQQLEVELR 1452
Query: 113 ELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALKTLVITST 165
++T EE+ + ++ L +A I E+ LK L+ T
Sbjct: 1453 QVTQMRTEESVRY-----------KQSLDDAAKTIQDKNKEIERLKQLIDKET 1494
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 41.2 bits (95), Expect = 0.002
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 39 LVETSAGEEAQGQE-GPAAAQLDVLRLR----SSSMEIREKGSEFLKEELHRAQKELKLK 93
L E +A E G+E A AQL R R + ++E E+ E + L K
Sbjct: 1377 LEEEAAARERAGRELQTAQAQLSEWRRRQEEEAGALEAGEEARRRAAREAEALTQRLAEK 1436
Query: 94 DEECERLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAE 153
E +RL + R +L+QEL++ T L E+ ++V KQ ++ L E + +
Sbjct: 1437 TETVDRLERGRRRLQQELDDATMDL-EQQRQLVSTLEKKQRKFDQLLAEEKAAV------ 1489
Query: 154 VTALKTLVITSTPASPNRELHPQLLSPTKAGPRKGHSRHK 193
L+ + + RE + LS T+A + +R +
Sbjct: 1490 ---LRAVEERERAEAEGREREARALSLTRALEEEQEAREE 1526
Score = 33.1 bits (74), Expect = 0.43
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 6/113 (5%)
Query: 47 EAQGQEGPAAAQLDVLRLRSSSMEIR----EKGSEFLKEELHRAQKELKLKDE--ECERL 100
EA+ G AA+ L L S +E R E+ S ++ E R Q+ ++ + E E
Sbjct: 930 EAEETRGRLAARKQELELVVSELEARVGEEEECSRQMQTEKKRLQQHIQELEAHLEAEEG 989
Query: 101 SKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAE 153
++ + QLE+ E FEE ++ + N K + K L++ + AE
Sbjct: 990 ARQKLQLEKVTTEAKMKKFEEDLLLLEDQNSKLSKERKLLEDRLAEFSSQAAE 1042
Score = 32.3 bits (72), Expect = 0.73
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 33 RESPGALVETSAGEEAQGQEGPAAAQLDVLRLRSS-SMEIREKGSEFLKEEL-HRAQKEL 90
+E G L E AG A+ + AA + + + E RE+ L +L RA+K L
Sbjct: 1820 QELRGRLGEEDAGARARHKMTIAALESKLAQAEEQLEQETRER---ILSGKLVRRAEKRL 1876
Query: 91 KLKDEECERLSKVREQLEQELEELTASL------FEEAHKMVREANMKQAASEKQLKEAR 144
K + E +V +QL +LE+ + EEA + A + +++L++
Sbjct: 1877 KEVVLQVEEERRVADQLRDQLEKGNLRVKQLKRQLEEAEEEASRAQAGRRRLQRELEDVT 1936
Query: 145 GKIDMLQAEVTALK 158
+ + EVT L+
Sbjct: 1937 ESAESMNREVTTLR 1950
Score = 31.2 bits (69), Expect = 1.6
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Query: 37 GALVETSAGEEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEE 96
G L + + EE + EG + L S+ E+ L ++ EL +
Sbjct: 1745 GNLSKAAILEEKRQLEGRLGQLEEELEEEQSNSELLNDRYRKLLLQVESLTTELSAERSF 1804
Query: 97 CERLSKVREQLEQELEELTASLFEE------AHKM-VREANMKQAASEKQLKE 142
+ R+QLE++++EL L EE HKM + K A +E+QL++
Sbjct: 1805 SAKAESGRQQLERQIQELRGRLGEEDAGARARHKMTIAALESKLAQAEEQLEQ 1857
Score = 30.4 bits (67), Expect = 2.8
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 38/145 (26%)
Query: 52 EGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKD--EECERL--------- 100
EG A AQL + LR + + E + E + R + E + +D EE E L
Sbjct: 1127 EGGARAQL-LKSLREAQAALAEAQEDLESERVARTKAEKQRRDLGEELEALRGELEDTLD 1185
Query: 101 -----SKVREQLEQELEELTASLFEEA---HKMVREANMK--QAASE--KQLKEAR---- 144
++R + EQE+ EL +L EE V+E + QA E +QL++AR
Sbjct: 1186 STNAQQELRSKREQEVTELKKTLEEETRIHEAAVQELRQRHGQALGELAEQLEQARRGKG 1245
Query: 145 ----------GKIDMLQAEVTALKT 159
++ L+AE+++L+T
Sbjct: 1246 AWEKTRLALEAEVSELRAELSSLQT 1270
Score = 29.3 bits (64), Expect = 6.2
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 51 QEGPAAAQLDVLRLRSSS----MEIREKGSEFLKEELHRAQKEL-----KLKD---EECE 98
+E L+ LRL+ + ME R + E ++EL + ++ L +L++ E+ +
Sbjct: 1042 EEEEKVKSLNKLRLKYEATIADMEDRLRKEEKGRQELEKLKRRLDGESSELQEQMVEQQQ 1101
Query: 99 RLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALK 158
R ++R QL ++ EEL A+L + A + ++ E Q A + D+ V K
Sbjct: 1102 RAEELRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQAALAEAQEDLESERVARTK 1161
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 41.2 bits (95), Expect = 0.002
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 39 LVETSAGEEAQGQE-GPAAAQLDVLRLR----SSSMEIREKGSEFLKEELHRAQKELKLK 93
L E +A E G+E A AQL R R + ++E E+ E + L K
Sbjct: 1369 LEEEAAARERAGRELQTAQAQLSEWRRRQEEEAGALEAGEEARRRAAREAEALTQRLAEK 1428
Query: 94 DEECERLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAE 153
E +RL + R +L+QEL++ T L E+ ++V KQ ++ L E + +
Sbjct: 1429 TETVDRLERGRRRLQQELDDATMDL-EQQRQLVSTLEKKQRKFDQLLAEEKAAV------ 1481
Query: 154 VTALKTLVITSTPASPNRELHPQLLSPTKAGPRKGHSRHK 193
L+ + + RE + LS T+A + +R +
Sbjct: 1482 ---LRAVEERERAEAEGREREARALSLTRALEEEQEAREE 1518
Score = 33.1 bits (74), Expect = 0.43
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 6/113 (5%)
Query: 47 EAQGQEGPAAAQLDVLRLRSSSMEIR----EKGSEFLKEELHRAQKELKLKDE--ECERL 100
EA+ G AA+ L L S +E R E+ S ++ E R Q+ ++ + E E
Sbjct: 922 EAEETRGRLAARKQELELVVSELEARVGEEEECSRQMQTEKKRLQQHIQELEAHLEAEEG 981
Query: 101 SKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAE 153
++ + QLE+ E FEE ++ + N K + K L++ + AE
Sbjct: 982 ARQKLQLEKVTTEAKMKKFEEDLLLLEDQNSKLSKERKLLEDRLAEFSSQAAE 1034
Score = 32.3 bits (72), Expect = 0.73
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 33 RESPGALVETSAGEEAQGQEGPAAAQLDVLRLRSS-SMEIREKGSEFLKEEL-HRAQKEL 90
+E G L E AG A+ + AA + + + E RE+ L +L RA+K L
Sbjct: 1812 QELRGRLGEEDAGARARHKMTIAALESKLAQAEEQLEQETRER---ILSGKLVRRAEKRL 1868
Query: 91 KLKDEECERLSKVREQLEQELEELTASL------FEEAHKMVREANMKQAASEKQLKEAR 144
K + E +V +QL +LE+ + EEA + A + +++L++
Sbjct: 1869 KEVVLQVEEERRVADQLRDQLEKGNLRVKQLKRQLEEAEEEASRAQAGRRRLQRELEDVT 1928
Query: 145 GKIDMLQAEVTALK 158
+ + EVT L+
Sbjct: 1929 ESAESMNREVTTLR 1942
Score = 31.2 bits (69), Expect = 1.6
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Query: 37 GALVETSAGEEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEE 96
G L + + EE + EG + L S+ E+ L ++ EL +
Sbjct: 1737 GNLSKAAILEEKRQLEGRLGQLEEELEEEQSNSELLNDRYRKLLLQVESLTTELSAERSF 1796
Query: 97 CERLSKVREQLEQELEELTASLFEE------AHKM-VREANMKQAASEKQLKE 142
+ R+QLE++++EL L EE HKM + K A +E+QL++
Sbjct: 1797 SAKAESGRQQLERQIQELRGRLGEEDAGARARHKMTIAALESKLAQAEEQLEQ 1849
Score = 30.4 bits (67), Expect = 2.8
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 38/145 (26%)
Query: 52 EGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKD--EECERL--------- 100
EG A AQL + LR + + E + E + R + E + +D EE E L
Sbjct: 1119 EGGARAQL-LKSLREAQAALAEAQEDLESERVARTKAEKQRRDLGEELEALRGELEDTLD 1177
Query: 101 -----SKVREQLEQELEELTASLFEEA---HKMVREANMK--QAASE--KQLKEAR---- 144
++R + EQE+ EL +L EE V+E + QA E +QL++AR
Sbjct: 1178 STNAQQELRSKREQEVTELKKTLEEETRIHEAAVQELRQRHGQALGELAEQLEQARRGKG 1237
Query: 145 ----------GKIDMLQAEVTALKT 159
++ L+AE+++L+T
Sbjct: 1238 AWEKTRLALEAEVSELRAELSSLQT 1262
Score = 29.3 bits (64), Expect = 6.2
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 51 QEGPAAAQLDVLRLRSSS----MEIREKGSEFLKEELHRAQKEL-----KLKD---EECE 98
+E L+ LRL+ + ME R + E ++EL + ++ L +L++ E+ +
Sbjct: 1034 EEEEKVKSLNKLRLKYEATIADMEDRLRKEEKGRQELEKLKRRLDGESSELQEQMVEQQQ 1093
Query: 99 RLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALK 158
R ++R QL ++ EEL A+L + A + ++ E Q A + D+ V K
Sbjct: 1094 RAEELRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQAALAEAQEDLESERVARTK 1153
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 41.2 bits (95), Expect = 0.002
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 39 LVETSAGEEAQGQE-GPAAAQLDVLRLR----SSSMEIREKGSEFLKEELHRAQKELKLK 93
L E +A E G+E A AQL R R + ++E E+ E + L K
Sbjct: 1410 LEEEAAARERAGRELQTAQAQLSEWRRRQEEEAGALEAGEEARRRAAREAEALTQRLAEK 1469
Query: 94 DEECERLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAE 153
E +RL + R +L+QEL++ T L E+ ++V KQ ++ L E + +
Sbjct: 1470 TETVDRLERGRRRLQQELDDATMDL-EQQRQLVSTLEKKQRKFDQLLAEEKAAV------ 1522
Query: 154 VTALKTLVITSTPASPNRELHPQLLSPTKAGPRKGHSRHK 193
L+ + + RE + LS T+A + +R +
Sbjct: 1523 ---LRAVEERERAEAEGREREARALSLTRALEEEQEAREE 1559
Score = 33.1 bits (74), Expect = 0.43
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 6/113 (5%)
Query: 47 EAQGQEGPAAAQLDVLRLRSSSMEIR----EKGSEFLKEELHRAQKELKLKDE--ECERL 100
EA+ G AA+ L L S +E R E+ S ++ E R Q+ ++ + E E
Sbjct: 963 EAEETRGRLAARKQELELVVSELEARVGEEEECSRQMQTEKKRLQQHIQELEAHLEAEEG 1022
Query: 101 SKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAE 153
++ + QLE+ E FEE ++ + N K + K L++ + AE
Sbjct: 1023 ARQKLQLEKVTTEAKMKKFEEDLLLLEDQNSKLSKERKLLEDRLAEFSSQAAE 1075
Score = 32.3 bits (72), Expect = 0.73
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 33 RESPGALVETSAGEEAQGQEGPAAAQLDVLRLRSS-SMEIREKGSEFLKEEL-HRAQKEL 90
+E G L E AG A+ + AA + + + E RE+ L +L RA+K L
Sbjct: 1853 QELRGRLGEEDAGARARHKMTIAALESKLAQAEEQLEQETRER---ILSGKLVRRAEKRL 1909
Query: 91 KLKDEECERLSKVREQLEQELEELTASL------FEEAHKMVREANMKQAASEKQLKEAR 144
K + E +V +QL +LE+ + EEA + A + +++L++
Sbjct: 1910 KEVVLQVEEERRVADQLRDQLEKGNLRVKQLKRQLEEAEEEASRAQAGRRRLQRELEDVT 1969
Query: 145 GKIDMLQAEVTALK 158
+ + EVT L+
Sbjct: 1970 ESAESMNREVTTLR 1983
Score = 31.2 bits (69), Expect = 1.6
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Query: 37 GALVETSAGEEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEE 96
G L + + EE + EG + L S+ E+ L ++ EL +
Sbjct: 1778 GNLSKAAILEEKRQLEGRLGQLEEELEEEQSNSELLNDRYRKLLLQVESLTTELSAERSF 1837
Query: 97 CERLSKVREQLEQELEELTASLFEE------AHKM-VREANMKQAASEKQLKE 142
+ R+QLE++++EL L EE HKM + K A +E+QL++
Sbjct: 1838 SAKAESGRQQLERQIQELRGRLGEEDAGARARHKMTIAALESKLAQAEEQLEQ 1890
Score = 30.4 bits (67), Expect = 2.8
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 38/145 (26%)
Query: 52 EGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKD--EECERL--------- 100
EG A AQL + LR + + E + E + R + E + +D EE E L
Sbjct: 1160 EGGARAQL-LKSLREAQAALAEAQEDLESERVARTKAEKQRRDLGEELEALRGELEDTLD 1218
Query: 101 -----SKVREQLEQELEELTASLFEEA---HKMVREANMK--QAASE--KQLKEAR---- 144
++R + EQE+ EL +L EE V+E + QA E +QL++AR
Sbjct: 1219 STNAQQELRSKREQEVTELKKTLEEETRIHEAAVQELRQRHGQALGELAEQLEQARRGKG 1278
Query: 145 ----------GKIDMLQAEVTALKT 159
++ L+AE+++L+T
Sbjct: 1279 AWEKTRLALEAEVSELRAELSSLQT 1303
Score = 29.3 bits (64), Expect = 6.2
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 51 QEGPAAAQLDVLRLRSSS----MEIREKGSEFLKEELHRAQKEL-----KLKD---EECE 98
+E L+ LRL+ + ME R + E ++EL + ++ L +L++ E+ +
Sbjct: 1075 EEEEKVKSLNKLRLKYEATIADMEDRLRKEEKGRQELEKLKRRLDGESSELQEQMVEQQQ 1134
Query: 99 RLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALK 158
R ++R QL ++ EEL A+L + A + ++ E Q A + D+ V K
Sbjct: 1135 RAEELRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQAALAEAQEDLESERVARTK 1194
>gi|4504063 golgin 97 [Homo sapiens]
Length = 767
Score = 41.2 bits (95), Expect = 0.002
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 29/194 (14%)
Query: 38 ALVETSAGEEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEE- 96
AL T A ++ ++G + +L + ++E +E+ + L Q ELK EE
Sbjct: 421 ALERTRAADQTTAEQG-------MRQLEQENAALKECRNEY-ERSLQNHQFELKKLKEEW 472
Query: 97 -------------CERLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEA 143
E + K RE+ +Q+ LTA + E+ + + + ++ L+
Sbjct: 473 SQREIVSVAMAQALEEVRKQREEFQQQAANLTAIIDEKEQNLREKTEVLLQKEQEILQLE 532
Query: 144 RG------KIDMLQAEVTALKTLVITSTPASPNRELHPQLLSPTKAGPRKGHSRHKSTSS 197
RG +I LQAE+ AL+TL +E +L P +A + H ++ +
Sbjct: 533 RGHNSALLQIHQLQAELEALRTLKAEEAAVVAEQEDLLRLRGPLQAEALSVNESHVTSRA 592
Query: 198 TLCPAV-CPAAGHT 210
P P AG T
Sbjct: 593 MQDPVFQLPTAGRT 606
Score = 32.3 bits (72), Expect = 0.73
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 47 EAQGQEGPAAAQLDVLRLRSSSMEIREKGSEF--LKEELHRAQKELKLK---DEECERLS 101
E + QE A Q + L+ + E +EK L+E++ +K L+ +E + L
Sbjct: 262 EQKEQELQALIQQLSIDLQKVTAETQEKEDVITHLQEKVASLEKRLEQNLSGEEHVQELL 321
Query: 102 KVREQLEQELEE----LTASLFEEAHKM------VREANMKQAASEKQLKEARGKIDMLQ 151
K + EQ LE+ L A+ +A + VRE ASE+QL++++G ++
Sbjct: 322 KEKTLAEQNLEDTRQQLLAARSSQAKAINTLETRVRELEQTLQASEEQLQQSKG---IVA 378
Query: 152 AEVTALKTLVITSTPASPNRE----LHPQLLSPTKA 183
A+ T ++ L + +S ++ L Q L T+A
Sbjct: 379 AQETQIQELAAANQESSHVQQQALALEQQFLERTQA 414
>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
sapiens]
Length = 693
Score = 40.4 bits (93), Expect = 0.003
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 27/167 (16%)
Query: 63 RLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEA 122
RLR +R++ KEE ++E +L D+E ERL K E+L+++ E L S +
Sbjct: 380 RLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQE-ERLWKKEERLQKQEERLALSQNHKL 438
Query: 123 HKMVREA--------NMKQAA--SEKQLKEARGKIDMLQAEVTALKTLVITSTPASPNRE 172
K + E N K++A E+Q+KE + K+D E + + N++
Sbjct: 439 DKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLDEEHLEAASQR-----------NQQ 487
Query: 173 LHPQLLSPTKAGPRKGHSRHKSTSSTLCPAVCPAAGHTLTPDREGKE 219
L QL G G +H + P P + D E +E
Sbjct: 488 LETQLSLVALPGEGDG-GQHLDSEEEEAPRPTP----NIPEDLESRE 529
Score = 28.9 bits (63), Expect = 8.1
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 46 EEAQGQEGPAAAQLD---VLRLRSSSMEIR-EKGSEFLKEELHRAQKELKLKDEECERLS 101
+E +G EG +Q++ L L S + R ++ E L+E+ + +E + E+ ERL
Sbjct: 309 QEVEGLEGKLQSQVENNQALSLLSKEQKQRLQEQEEMLREQEAQRVREQERLCEQNERLR 368
Query: 102 KVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEAR 144
+ ++ L+++ E L +E +E +++ Q +E R
Sbjct: 369 EQQKTLQEQGERLRK---QEQRLRKQEERLRKEEERLQKQEKR 408
>gi|58530842 desmoplakin isoform II [Homo sapiens]
Length = 2272
Score = 40.4 bits (93), Expect = 0.003
Identities = 23/113 (20%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 46 EEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVRE 105
+E++ Q + + L ++ +E + + L++EL+RA+ L+ + +RL ++
Sbjct: 1200 QESKNQCTQVVQERESLLVKIKVLEQDKARLQRLEDELNRAKSTLEAETRVKQRLECEKQ 1259
Query: 106 QLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALK 158
Q++ +L + + + +R+ ++ SE++ R +I+ LQAE+ ++
Sbjct: 1260 QIQNDLNQWKTQ-YSRKEEAIRKIESEREKSEREKNSLRSEIERLQAEIKRIE 1311
Score = 31.2 bits (69), Expect = 1.6
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 60 DVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECER-----LSKVREQLEQELEEL 114
+ +R S E E+ L+ E+ R Q E+K +E C R + + QLE E
Sbjct: 1277 EAIRKIESEREKSEREKNSLRSEIERLQAEIKRIEERCRRKLEDSTRETQSQLETERSRY 1336
Query: 115 TASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALK 158
+ + + Q E + ++ D L+ +VTA++
Sbjct: 1337 QREIDKLRQRPYGSHRETQTECEWTVDTSKLVFDGLRKKVTAMQ 1380
>gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C
isoform 1 [Homo sapiens]
Length = 693
Score = 40.4 bits (93), Expect = 0.003
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 27/167 (16%)
Query: 63 RLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEA 122
RLR +R++ KEE ++E +L D+E ERL K E+L+++ E L S +
Sbjct: 380 RLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQE-ERLWKKEERLQKQEERLALSQNHKL 438
Query: 123 HKMVREA--------NMKQAA--SEKQLKEARGKIDMLQAEVTALKTLVITSTPASPNRE 172
K + E N K++A E+Q+KE + K+D E + + N++
Sbjct: 439 DKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLDEEHLEAASQR-----------NQQ 487
Query: 173 LHPQLLSPTKAGPRKGHSRHKSTSSTLCPAVCPAAGHTLTPDREGKE 219
L QL G G +H + P P + D E +E
Sbjct: 488 LETQLSLVALPGEGDG-GQHLDSEEEEAPRPTP----NIPEDLESRE 529
Score = 28.9 bits (63), Expect = 8.1
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 46 EEAQGQEGPAAAQLD---VLRLRSSSMEIR-EKGSEFLKEELHRAQKELKLKDEECERLS 101
+E +G EG +Q++ L L S + R ++ E L+E+ + +E + E+ ERL
Sbjct: 309 QEVEGLEGKLQSQVENNQALSLLSKEQKQRLQEQEEMLREQEAQRVREQERLCEQNERLR 368
Query: 102 KVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEAR 144
+ ++ L+++ E L +E +E +++ Q +E R
Sbjct: 369 EQQKTLQEQGERLRK---QEQRLRKQEERLRKEEERLQKQEKR 408
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 40.0 bits (92), Expect = 0.004
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 46 EEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRA--QKELKLKDEECERLSKV 103
EE QEG + LR + + RE+ + ++E R Q+E +L+ +E ER +
Sbjct: 1672 EEQLLQEG----EEQQLRRQERDRKFREEEQQLRRQERERKFLQEEQQLRRQELERKFRE 1727
Query: 104 REQLEQELEELTASLFEEAHKMVREANMKQAASEKQLK 141
EQL QE E+ E K++ E ++ E+QL+
Sbjct: 1728 EEQLRQETEQEQLRRQERYRKILEEEQLRPEREEQQLR 1765
Score = 36.6 bits (83), Expect = 0.039
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 49 QGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLE 108
Q QE Q D R RS +K L+EE R + L K E+L K ++ L+
Sbjct: 848 QLQEEEDGLQEDQERRRSQEQRRDQKWRWQLEEERKRRRHTLYAKPALQEQLRKEQQLLQ 907
Query: 109 QELEELTASLFEEAHKMVREANMKQAASEKQLKE 142
+E EEL EE K R+ +Q E+QL++
Sbjct: 908 EEEEELQR---EEREKRRRQEQERQYREEEQLQQ 938
Score = 36.6 bits (83), Expect = 0.039
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 80 KEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQ 139
+EEL R ++E + + E+ ER + EQL+QE E+L L EE K R+ +Q +K+
Sbjct: 910 EEELQREEREKRRRQEQ-ERQYREEEQLQQEEEQL---LREEREKRRRQERERQYRKDKK 965
Query: 140 LKE 142
L++
Sbjct: 966 LQQ 968
Score = 36.2 bits (82), Expect = 0.051
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 62 LRLRSSSMEIR--EKGSEFLKEELHRAQKE-LKLKDEECERLSKVREQLEQELEELTASL 118
LR + ++R E+ + L+EE R ++E +L+ +E +R + EQL QE EE
Sbjct: 1731 LRQETEQEQLRRQERYRKILEEEQLRPEREEQQLRRQERDRKFREEEQLRQEREEQQLRS 1790
Query: 119 FEEAHKMVREANMKQAASEKQLK 141
E K E ++Q E+QL+
Sbjct: 1791 QESDRKFREEEQLRQEREEQQLR 1813
Score = 35.0 bits (79), Expect = 0.11
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 51 QEGPAAAQLDVLRLRSSSMEIREKGSEFLKEE--LHRAQKELK-LKDEECERLSKVREQL 107
+E P Q + R + +E+G +FL+EE L R ++E K LK+E+ R + +QL
Sbjct: 1349 EEQPLRRQERDRKFREEELRHQEQGRKFLEEEQRLRRQERERKFLKEEQQLRCQEREQQL 1408
Query: 108 EQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAE 153
Q+ + EE +E + K E+Q++ + L+ E
Sbjct: 1409 RQDRDRKFRE--EEQQLSRQERDRKFREEEQQVRRQERERKFLEEE 1452
Score = 34.7 bits (78), Expect = 0.15
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 61 VLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDE-------ECERLSKVREQLEQELEE 113
+LR ++E+ ++ +EE + ++E L +E E ER + E+L+QE E+
Sbjct: 1033 LLREEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQ 1092
Query: 114 LTASLFEEAHKMVREANMKQAASEKQLKE 142
L L EE K R+ +Q E++L++
Sbjct: 1093 L---LREEPEKRRRQERERQCREEEELQQ 1118
Score = 34.3 bits (77), Expect = 0.19
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 49 QGQEGPAAAQLDVLRLRSSSMEIR--EKGSEFLKEE--LHRAQKELKLKDEECERLSKVR 104
+G+E Q + R ++R E+ +FL+EE L R + E K ++EE R +
Sbjct: 1678 EGEEQQLRRQERDRKFREEEQQLRRQERERKFLQEEQQLRRQELERKFREEEQLRQETEQ 1737
Query: 105 EQLEQE------LEELTASLFEEAHKMVREANMKQAASEKQLKEAR 144
EQL ++ LEE E ++ R+ ++ E+QL++ R
Sbjct: 1738 EQLRRQERYRKILEEEQLRPEREEQQLRRQERDRKFREEEQLRQER 1783
Score = 33.9 bits (76), Expect = 0.25
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 46 EEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVRE 105
E+ G+E + ++ R E++++ + L+EE + +++ E ER + E
Sbjct: 1061 EQLLGEERETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQ------ERERQCREEE 1114
Query: 106 QLEQELEELTASLFEEAHKMVREANMKQAASEKQLKE 142
+L+QE E+L L EE K R+ +Q E+++++
Sbjct: 1115 ELQQEEEQL---LREEREKRRRQELERQYREEEEVQQ 1148
Score = 31.6 bits (70), Expect = 1.2
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 80 KEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQ 139
+E+L R ++E K + +E ER + E+++QE E+L L EE K R+ +Q E++
Sbjct: 1120 EEQLLREERE-KRRRQELERQYREEEEVQQEEEQL---LREEPEKRRRQELERQYREEEE 1175
Query: 140 LKE 142
L++
Sbjct: 1176 LQQ 1178
Score = 31.6 bits (70), Expect = 1.2
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 32 HRESPGALVETSAGEEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEE---LHRAQK 88
H+E +E Q +E + LR + ++R+ +EE L R ++
Sbjct: 1369 HQEQGRKFLEEEQRLRRQERERKFLKEEQQLRCQEREQQLRQDRDRKFREEEQQLSRQER 1428
Query: 89 ELKLKDEECE--RLSKVREQLEQELEELTASLFEEAHKMVR-EANMKQAASEKQLKEARG 145
+ K ++EE + R + R+ LE+E + L +E H+ R E + Q E+QL
Sbjct: 1429 DRKFREEEQQVRRQERERKFLEEEQQ-----LRQERHRKFREEEQLLQEREEQQLHRQER 1483
Query: 146 KIDMLQAE 153
L+ E
Sbjct: 1484 DRKFLEEE 1491
Score = 31.6 bits (70), Expect = 1.2
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 18/98 (18%)
Query: 63 RLRSSSMEIREKGSEFLKEE--LHRAQKELKLKDEE---------------CERLSKVRE 105
+ R + +E +FL+EE LHR Q++ K EE +R + E
Sbjct: 1502 KFREQELRSQEPERKFLEEEQQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEE 1561
Query: 106 QLEQELEELTASLFEEAHKM-VREANMKQAASEKQLKE 142
QL QE EE S E K + E +++ E++ E
Sbjct: 1562 QLRQEREEQQLSRQERDRKFRLEEQKVRRQEQERKFME 1599
Score = 30.8 bits (68), Expect = 2.1
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 33 RESPGALVETSAGEEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKL 92
RE P + + +E + +LR +E ++ +EE + ++E L
Sbjct: 1095 REEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLL 1154
Query: 93 KDE-------ECERLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARG 145
++E E ER + E+L+QE E+L L EE K R+ +Q E++L+ +
Sbjct: 1155 REEPEKRRRQELERQYREEEELQQEEEQL---LREEQEKR-RQERERQYREEEELQRQKR 1210
Query: 146 K 146
K
Sbjct: 1211 K 1211
Score = 30.4 bits (67), Expect = 2.8
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 80 KEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQ 139
+E+L R ++E K + +E ER + +++L+QE E+L L EE K + +Q E++
Sbjct: 1000 EEQLLREERE-KRRRQEWERQYRKKDELQQEEEQL---LREEREKRRLQERERQYREEEE 1055
Query: 140 LKE 142
L++
Sbjct: 1056 LQQ 1058
Score = 29.6 bits (65), Expect = 4.7
Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 23 WKSTDPCQGHRESPGALVETSAGEEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEE 82
W+ Q E + + + + +E P QL R +E+R KG E +++
Sbjct: 174 WRQRQEWQEREERRAEEEQLQSCKGHETEEFPDEEQLR----RRELLELRRKGREEKQQQ 229
Query: 83 LHRAQKELKLKDEECE------RLSKVREQLEQELEELTASLFEEAHKMVREANMKQAAS 136
Q + ++EE E L K E+L++E + L EE + +R+ ++
Sbjct: 230 RRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEE-EEQLRKLERQELRR 288
Query: 137 EKQLKE 142
E+Q +E
Sbjct: 289 ERQEEE 294
Score = 29.6 bits (65), Expect = 4.7
Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 71 IREKGSEFLKEELHRAQKELKLKDEECERLSKV---REQLEQELEELTASLFEEAHKMVR 127
+ K E L+EE + Q+EL+ ++E+ +L + RE+ E+E ++ ++ +
Sbjct: 252 VLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQE 311
Query: 128 EANMKQAASEKQLKEAR 144
E +Q ++ +E R
Sbjct: 312 EERREQQEERREQQERR 328
Score = 29.6 bits (65), Expect = 4.7
Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 46 EEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVRE 105
EE Q +E + + R +++++ + L+EE + +++ E ER + +
Sbjct: 911 EELQREEREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQ------ERERQYRKDK 964
Query: 106 QLEQELEELTASLFEEAHKMVREANMKQAASEKQLKE 142
+L+Q+ E+L L EE K R+ K+ E++L++
Sbjct: 965 KLQQKEEQL---LGEEPEKRRRQEREKKYREEEELQQ 998
Score = 29.6 bits (65), Expect = 4.7
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 18/102 (17%)
Query: 70 EIREKGSEFLKEELHRAQKELKLKDEEC-----------ERLSKVREQ--LEQELEELTA 116
E REK +E +R K+L+ K+E+ ER K RE+ L+QE E+L
Sbjct: 946 EEREKRRRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYREEEELQQEEEQLLR 1005
Query: 117 SLFE-----EAHKMVREANMKQAASEKQLKEARGKIDMLQAE 153
E E + R+ + Q E+ L+E R K + + E
Sbjct: 1006 EEREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERE 1047
Score = 29.3 bits (64), Expect = 6.2
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 65 RSSSMEIREKGSEFLKEELHRAQKE-----LKLKDEECERLSKVREQLEQELEELTASLF 119
R E RE+ E +++L R Q+E L+ + EE R ++R + E+E E
Sbjct: 321 RREQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQLRREQEEERREQQLRRE 380
Query: 120 EEAHKMVREANMKQAASEKQLK 141
++ + + +Q E+QL+
Sbjct: 381 QQLRREQQLRREQQLRREQQLR 402
Score = 29.3 bits (64), Expect = 6.2
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 70 EIREKGSEFLKEELHRAQ---KELKLKDEECERLSKVREQLEQELEELTASLFEEAHKMV 126
E R + E +++L R Q +E +LK +E E + R + EQ+L E+ K
Sbjct: 494 EERREQQERREQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKRE 553
Query: 127 REANMKQAASEKQLK 141
E ++Q E++LK
Sbjct: 554 EEKRLEQERREQRLK 568
Score = 29.3 bits (64), Expect = 6.2
Identities = 18/81 (22%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 80 KEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQ 139
+++LHR +++ K +EE + R++ EQ+L F E ++++E +Q +++
Sbjct: 1633 EQQLHRQERDRKFLEEEPQLR---RQEREQQLRHDRDRKFREEEQLLQEGEEQQLRRQER 1689
Query: 140 LKEARGKIDMLQAEVTALKTL 160
++ R + L+ + K L
Sbjct: 1690 DRKFREEEQQLRRQERERKFL 1710
Score = 28.9 bits (63), Expect = 8.1
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Query: 46 EEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVRE 105
EE Q Q + + +L + RE+ E +++ R +++L+ K EE R +
Sbjct: 263 EEPQRQRELQEEEEQLRKLERQELR-RERQEEEQQQQRLRREQQLRRKQEEERREQQEER 321
Query: 106 QLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEAR 144
+ +QE E E+ + +E +Q +Q +E R
Sbjct: 322 REQQERREQQEERREQQLRREQEERREQQLRREQEEERR 360
Score = 28.9 bits (63), Expect = 8.1
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 65 RSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLS---KVREQLEQELEELTASLFEE 121
R E RE+ + +E+ R ++ LK ++EE ERL + +QL +E EE L +
Sbjct: 496 RREQQERREQ--QLRREQEERREQRLKRQEEE-ERLQQRLRSEQQLRREQEERREQLLKR 552
Query: 122 AHKMVREANMKQAASEKQLKEARGKI 147
+ E ++ +++ +E R ++
Sbjct: 553 EEEKRLEQERREQRLKREQEERRDQL 578
Score = 28.9 bits (63), Expect = 8.1
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 63 RLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSK--VREQLEQELEELTASLFE 120
RL+ E E+ + LK E +++ +L+ E+ ER + RE+ E+ LE+ E
Sbjct: 619 RLKREEPE-EERRQQLLKSEEQEERRQQQLRREQQERREQRLKREEEEERLEQRLKREHE 677
Query: 121 EAHKMVREANMKQAASEKQLKEARGKID-MLQAEVTALKTLV 161
E + A +Q + +++K K L++E A ++ V
Sbjct: 678 EERREQELAEEEQEQARERIKSRIPKWQWQLESEADARQSKV 719
Score = 28.9 bits (63), Expect = 8.1
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 39 LVETSAGEEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECE 98
L E E+ + Q +L L ++ RE+ + +EE + + + + +E
Sbjct: 811 LPEEEEKEQRRRQRREREKELQFLE-EEEQLQRRERAQQLQEEEDGLQEDQERRRSQEQR 869
Query: 99 RLSKVREQLEQELEELTASLFEE---AHKMVREANMKQAASEKQLKEARGK 146
R K R QLE+E + +L+ + ++ +E + Q E+ +E R K
Sbjct: 870 RDQKWRWQLEEERKRRRHTLYAKPALQEQLRKEQQLLQEEEEELQREEREK 920
Score = 28.9 bits (63), Expect = 8.1
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 80 KEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQ 139
+E+L R ++E K + +E ER + E+L+QE E+L L EE R+ +Q E++
Sbjct: 1030 EEQLLREERE-KRRLQERERQYREEEELQQEEEQL---LGEERETRRRQELERQYRKEEE 1085
Query: 140 LKE 142
L++
Sbjct: 1086 LQQ 1088
Score = 28.9 bits (63), Expect = 8.1
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 80 KEELHRAQKELKLKDEE--CERLSKVREQLEQEL--EELTASLFEEAHKMVREANMKQAA 135
+++LHR +++ K +EE R + R+ EQEL +E EE ++ R+ ++
Sbjct: 1475 EQQLHRQERDRKFLEEEQQLRRQERDRKFREQELRSQEPERKFLEEEQQLHRQQRQRKFL 1534
Query: 136 SEKQ 139
E+Q
Sbjct: 1535 QEEQ 1538
>gi|92859701 myosin VI [Homo sapiens]
Length = 1285
Score = 40.0 bits (92), Expect = 0.004
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 81 EELHRAQKELKLKDEECERLSKVREQLEQEL-----EELTASLFEEAHKMVREANMKQAA 135
EEL A ++ K ++EE ERL +++E++E+E +E EE +M E K+
Sbjct: 907 EELLSALQKKKQQEEEAERLRRIQEEMEKERKRREEDEKRRRKEEEERRMKLEMEAKRKQ 966
Query: 136 SEKQLKEARGKIDMLQAEVTA 156
E++ K+ +QAEV A
Sbjct: 967 EEEERKKREDDEKRIQAEVEA 987
Score = 31.2 bits (69), Expect = 1.6
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 72 REKGSEFLKEELHRAQ----KELKLKDEECERLSKVREQLEQELEELTASLFEEAHKMVR 127
++K E E L R Q KE K ++E+ +R K E+ +LE EE + R
Sbjct: 915 KKKQQEEEAERLRRIQEEMEKERKRREEDEKRRRKEEEERRMKLEMEAKRKQEEEERKKR 974
Query: 128 EANMKQAASEKQLKEARGKIDMLQAE 153
E + K+ +E + + AR K + Q +
Sbjct: 975 EDDEKRIQAEVEAQLARQKEEESQQQ 1000
Score = 30.0 bits (66), Expect = 3.6
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 72 REKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEAHKMVREANM 131
+E+ +E L+ +KE K ++E+ +R K E+ +LE EE + RE +
Sbjct: 919 QEEEAERLRRIQEEMEKERKRREEDEKRRRKEEEERRMKLEMEAKRKQEEEERKKREDDE 978
Query: 132 K--QAASEKQLKEARGKIDMLQA 152
K QA E QL + + QA
Sbjct: 979 KRIQAEVEAQLARQKEEESQQQA 1001
>gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo
sapiens]
Length = 693
Score = 40.0 bits (92), Expect = 0.004
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 63 RLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEA 122
RLR +R++ KEE ++E +L D+E ERL K E+L+++ E L S +
Sbjct: 380 RLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQE-ERLWKKEERLQKQEERLALSQNHKL 438
Query: 123 HKMVREA--------NMKQAA--SEKQLKEARGKID 148
K + E N K++A E+Q+KE + K+D
Sbjct: 439 DKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLD 474
>gi|45439327 periplakin [Homo sapiens]
Length = 1756
Score = 40.0 bits (92), Expect = 0.004
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 8/131 (6%)
Query: 32 HRESPGALVETSAGEEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELK 91
+ E PG E SA E+ E Q+D LR ++ R E EEL R ++ +
Sbjct: 1358 YEEEPGLRAEASAFAESIDVE---LRQIDKLRAELRRLQRRRTELERQLEELERERQARR 1414
Query: 92 LKDEECERLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEK----QLKEARGKI 147
+ E +RL + LEQE E + K+V + + +QA QL+E + +
Sbjct: 1415 EAEREVQRLQQRLAALEQEEAEAREKV-THTQKVVLQQDPQQAREHALLRLQLEEEQHRR 1473
Query: 148 DMLQAEVTALK 158
+L+ E+ L+
Sbjct: 1474 QLLEGELETLR 1484
Score = 28.9 bits (63), Expect = 8.1
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 70 EIREKGSE---FLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEAHKMV 126
++REK E FL+++L R +KE + E V+E L+ E + T + +
Sbjct: 1082 QLREKQEEELSFLQDKLKRLEKERAM----AEGKITVKEVLKVEKDAATEREVSDLTRQY 1137
Query: 127 REANMKQAASEKQLKEARGKIDMLQAE 153
+ K AS+++ E KI L+ E
Sbjct: 1138 EDEAAKARASQREKTELLRKIWALEEE 1164
>gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo
sapiens]
Length = 693
Score = 40.0 bits (92), Expect = 0.004
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 63 RLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEA 122
RLR +R++ KEE ++E +L D+E ERL K E+L+++ E L S +
Sbjct: 380 RLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQE-ERLWKKEERLQKQEERLALSQNHKL 438
Query: 123 HKMVREA--------NMKQAA--SEKQLKEARGKID 148
K + E N K++A E+Q+KE + K+D
Sbjct: 439 DKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLD 474
Score = 28.9 bits (63), Expect = 8.1
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 46 EEAQGQEGPAAAQLD---VLRLRSSSMEIR-EKGSEFLKEELHRAQKELKLKDEECERLS 101
+E +G EG +Q++ L L S + R ++ E L+E+ + +E + E+ ERL
Sbjct: 309 QEVEGLEGKLQSQVENNQALSLLSKEQKQRLQEQEEMLREQEAQRVREQERLCEQNERLR 368
Query: 102 KVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEAR 144
+ ++ L+++ E L +E +E +++ Q +E R
Sbjct: 369 EQQKTLQEQGERLRK---QEQRLRKQEERLRKEEERLQKQEKR 408
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 39.3 bits (90), Expect = 0.006
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 63 RLRSSSMEIREKGSEFLKEE--LHRAQKELKLKDEECERLSKVREQLEQELEELTASLFE 120
RLR ++RE+ + ++E L +KEL+ +++E K+REQ EQ ++E ++E
Sbjct: 263 RLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELREQKKLREQEEQ-MQEQEEKMWE 321
Query: 121 EAHKMVREANMKQAASEKQLKE 142
+ KM RE K E++L E
Sbjct: 322 QEEKM-REQEEKMWRQEERLWE 342
Score = 32.7 bits (73), Expect = 0.56
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 22/108 (20%)
Query: 56 AAQLDVLRLRSSSMEIREKGSEFLKEELHRAQ----------KELKLKDEECERL----- 100
A L++ R ++ E+++K +E L+E+L A+ KELK K E + L
Sbjct: 170 ALSLELYRNTITNEELKKKNAE-LQEKLRLAESEKSEIQLNVKELKRKLERAKFLLPQVQ 228
Query: 101 -SKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKI 147
+ ++E++ ++ EEL E K +R+ K E++L+E GK+
Sbjct: 229 TNTLQEEMWRQEEEL-----REQEKKIRKQEEKMWRQEERLREQEGKM 271
Score = 32.7 bits (73), Expect = 0.56
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 46 EEAQGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVRE 105
E + QEG Q + +R + + +EK EL +KEL+ + + E+ +++E
Sbjct: 262 ERLREQEGKMREQEEKMRRQEKRLREQEK-------ELREQEKELREQKKLREQEEQMQE 314
Query: 106 QLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKI 147
Q E+++ E + E+ KM R+ + EKQ++E K+
Sbjct: 315 Q-EEKMWEQEEKMREQEEKMWRQEE-RLWEQEKQMREQEQKM 354
Score = 32.7 bits (73), Expect = 0.56
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 63 RLRSSSMEIREKGSEFLKEELHRAQKELKLKDEEC-ERLSKVREQLEQELEELTASLFEE 121
RLR +RE+ + +EE R +K+ + ++++ ++ K+RE E+ + E + EE
Sbjct: 515 RLREKEERMREQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMRE--EERMREREKKMREE 572
Query: 122 AHKMVREANMKQAASEKQLKEARGKI 147
+M+RE K E++++E K+
Sbjct: 573 -EEMMREQEEKMQEQEEKMREQEEKM 597
Score = 31.2 bits (69), Expect = 1.6
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 79 LKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEAHKM------VREANMK 132
L+EE+ R ++EL+ ++++ + + + E+ L E + E+ KM +RE +
Sbjct: 232 LQEEMWRQEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRLREQEKE 291
Query: 133 QAASEKQLKEAR 144
EK+L+E +
Sbjct: 292 LREQEKELREQK 303
Score = 29.6 bits (65), Expect = 4.7
Identities = 16/65 (24%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 80 KEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQ 139
KEE R Q+++ ++E+ + ++RE+ E+++ E ++ E+ KM ++ EK+
Sbjct: 371 KEERMREQEKMWEQEEKMQEEERIRER-EKKMREEEETMREQEEKMQKQEENMWEQEEKE 429
Query: 140 LKEAR 144
++ R
Sbjct: 430 WQQQR 434
Score = 28.9 bits (63), Expect = 8.1
Identities = 21/81 (25%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 70 EIREKGSEFLKEELHRAQKELKLKDEE---CERLSKVREQLEQELEELTASLFEEAHKMV 126
E+RE+ + K+E ++E +L+++E E+ K+R Q E+ L E L E+ ++
Sbjct: 242 ELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQ-EKRLREQEKELREQEKELR 300
Query: 127 REANMKQAASEKQLKEARGKI 147
+ +++ E+Q++E K+
Sbjct: 301 EQKKLRE--QEEQMQEQEEKM 319
>gi|110347443 TATA element modulatory factor 1 [Homo sapiens]
Length = 1093
Score = 39.3 bits (90), Expect = 0.006
Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 13/106 (12%)
Query: 60 DVLRLRSSSME-IREKGSEFLKEELHRAQ--KELKLKDEECE----RLSKVREQLEQELE 112
D+L+ + + + E+G + K++LH + K+L+ KD+E E +L+K ++LE+EL+
Sbjct: 546 DLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKLRAKDKENENMVAKLNKKVKELEEELQ 605
Query: 113 ELTASL--FEEAHKMVREANMKQAAS--EKQLKE-ARGKIDMLQAE 153
L L EE K RE N+K+ S E+Q K+ R ++DM + E
Sbjct: 606 HLKQVLDGKEEVEKQHRE-NIKKLNSMVERQEKDLGRLQVDMDELE 650
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 39.3 bits (90), Expect = 0.006
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 17/146 (11%)
Query: 6 PQPDQGLPPPLAAVPVPWKSTDPCQGHRESPGALVETSAGEEAQGQEGPAAAQLDVLRLR 65
P P G PP A P G PG E ++ EE Q ++ Q +L+L
Sbjct: 2328 PAPLAGQKPPADAAP------GGGSGALSRPGFEKEEASQEERQRKQ-----QEQLLQLE 2376
Query: 66 SSSMEIREKGSEFLKEELHRAQKELKLKDEECERLSKVREQLEQELEELTASLFEEAHKM 125
+E+ + L+EEL R + EL+ EE + L +++EL+EL +
Sbjct: 2377 RERVELEKLRQLRLQEELERERVELQRHREEEQLL------VQRELQELQTIKHHVLQQQ 2430
Query: 126 VREANMKQAASEKQLKEARGKIDMLQ 151
E + A +QL + R +++ +Q
Sbjct: 2431 QEERQAQFALQREQLAQQRLQLEQIQ 2456
>gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo
sapiens]
Length = 1185
Score = 39.3 bits (90), Expect = 0.006
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 18/104 (17%)
Query: 63 RLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECER--------LSKVREQLEQELEEL 114
RLR ++ EK +EL RA++ K+ +E +R LS+ E+L+ L+E
Sbjct: 415 RLRQMEAQLEEKN-----QELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKER 469
Query: 115 TASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALK 158
A+L E+ + ++RE +++KQL+E + D L + AL+
Sbjct: 470 MAAL-EDKNSLLREVE----SAKKQLEETQHDKDQLVLNIEALR 508
>gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo
sapiens]
Length = 1202
Score = 39.3 bits (90), Expect = 0.006
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 18/104 (17%)
Query: 63 RLRSSSMEIREKGSEFLKEELHRAQKELKLKDEECER--------LSKVREQLEQELEEL 114
RLR ++ EK +EL RA++ K+ +E +R LS+ E+L+ L+E
Sbjct: 415 RLRQMEAQLEEKN-----QELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKER 469
Query: 115 TASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAEVTALK 158
A+L E+ + ++RE +++KQL+E + D L + AL+
Sbjct: 470 MAAL-EDKNSLLREVE----SAKKQLEETQHDKDQLVLNIEALR 508
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.129 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,804,353
Number of Sequences: 37866
Number of extensions: 764979
Number of successful extensions: 8438
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 545
Number of HSP's that attempted gapping in prelim test: 5826
Number of HSP's gapped (non-prelim): 2759
length of query: 382
length of database: 18,247,518
effective HSP length: 104
effective length of query: 278
effective length of database: 14,309,454
effective search space: 3978028212
effective search space used: 3978028212
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.