Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 21265101
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21265101 transmembrane 4 superfamily member 1 [Homo sapiens]
(202 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21265101 transmembrane 4 superfamily member 1 [Homo sapiens] 430 e-121
gi|4759240 transmembrane 4 superfamily member 4 [Homo sapiens] 223 1e-58
gi|21265113 transmembrane 4 superfamily member 5 [Homo sapiens] 195 2e-50
gi|20270327 transmembrane 4 L six family member 18 [Homo sapiens] 192 1e-49
gi|115511028 transmembrane 4 L six family member 19 [Homo sapiens] 100 6e-22
gi|188528611 transmembrane 4 L six family member 20 [Homo sapiens] 60 1e-09
gi|16118240 keratin associated protein 9.2 [Homo sapiens] 30 1.1
gi|169212028 PREDICTED: keratin-associated protein 9-2-like 2-li... 30 1.8
gi|224994189 prominin 1 isoform 2 [Homo sapiens] 29 2.4
gi|67003568 skin-specific protein 32 [Homo sapiens] 29 2.4
gi|224994199 prominin 1 isoform 4 [Homo sapiens] 29 2.4
gi|224994197 prominin 1 isoform 5 [Homo sapiens] 29 2.4
gi|224994195 prominin 1 isoform 6 [Homo sapiens] 29 2.4
gi|224994193 prominin 1 isoform 7 [Homo sapiens] 29 2.4
gi|224994191 prominin 1 isoform 2 [Homo sapiens] 29 2.4
gi|5174387 prominin 1 isoform 1 [Homo sapiens] 29 2.4
gi|169212012 PREDICTED: keratin-associated protein 9-2-like 1-li... 29 2.4
gi|237874289 TLC domain containing 1 isoform 2 [Homo sapiens] 29 3.1
gi|19923999 TLC domain containing 1 isoform 1 [Homo sapiens] 29 3.1
gi|37588869 ring finger protein 123 [Homo sapiens] 29 3.1
gi|157743245 WD repeat domain 43 [Homo sapiens] 28 4.1
gi|239756792 PREDICTED: hypothetical protein [Homo sapiens] 28 5.3
gi|239751312 PREDICTED: hypothetical protein [Homo sapiens] 28 5.3
gi|239745809 PREDICTED: hypothetical protein [Homo sapiens] 28 5.3
gi|91106202 G protein-coupled receptor 22 [Homo sapiens] 28 5.3
gi|10863973 hepcidin antimicrobial peptide preproprotein [Homo s... 28 6.9
gi|13994372 keratin associated protein 17-1 [Homo sapiens] 28 6.9
gi|94536784 coiled-coil domain containing 51 [Homo sapiens] 28 6.9
gi|134244291 G-protein coupled receptor 37 like 1 [Homo sapiens] 28 6.9
gi|38348340 diacylglycerol O-acyltransferase 2-like 6 [Homo sapi... 28 6.9
>gi|21265101 transmembrane 4 superfamily member 1 [Homo sapiens]
Length = 202
Score = 430 bits (1106), Expect = e-121
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 1 MCYGKCARCIGHSLVGLALLCIAANILLYFPNGETKYASENHLSRFVWFFSGIVGGGLLM 60
MCYGKCARCIGHSLVGLALLCIAANILLYFPNGETKYASENHLSRFVWFFSGIVGGGLLM
Sbjct: 1 MCYGKCARCIGHSLVGLALLCIAANILLYFPNGETKYASENHLSRFVWFFSGIVGGGLLM 60
Query: 61 LLPAFVFIGLEQDDCCGCCGHENCGKRCAMLSSVLAALIGIAGSGYCVIVAALGLAEGPL 120
LLPAFVFIGLEQDDCCGCCGHENCGKRCAMLSSVLAALIGIAGSGYCVIVAALGLAEGPL
Sbjct: 61 LLPAFVFIGLEQDDCCGCCGHENCGKRCAMLSSVLAALIGIAGSGYCVIVAALGLAEGPL 120
Query: 121 CLDSLGQWNYTFASTEGQYLLDTSTWSECTEPKHIVEWNVSLFSILLALGGIEFILCLIQ 180
CLDSLGQWNYTFASTEGQYLLDTSTWSECTEPKHIVEWNVSLFSILLALGGIEFILCLIQ
Sbjct: 121 CLDSLGQWNYTFASTEGQYLLDTSTWSECTEPKHIVEWNVSLFSILLALGGIEFILCLIQ 180
Query: 181 VINGVLGGICGFCCSHQQQYDC 202
VINGVLGGICGFCCSHQQQYDC
Sbjct: 181 VINGVLGGICGFCCSHQQQYDC 202
>gi|4759240 transmembrane 4 superfamily member 4 [Homo sapiens]
Length = 202
Score = 223 bits (567), Expect = 1e-58
Identities = 98/193 (50%), Positives = 138/193 (71%), Gaps = 3/193 (1%)
Query: 1 MCYGKCARCIGHSLVGLALLCIAANILLYFPNGETKYASENHLSRFVWFFSGIVGGGLLM 60
MC G CARC+G +L+ LA ANILL+FP G+ +HLS+ +WFF GI+G G+LM
Sbjct: 1 MCTGGCARCLGGTLIPLAFFGFLANILLFFPGGKV-IDDNDHLSQEIWFFGGILGSGVLM 59
Query: 61 LLPAFVFIGLEQDDCCGCCGHENCGKRCAMLSSVLAALIGIAGSGYCVIVAALGLAEGPL 120
+ PA VF+GL+ +DCCGCCG+E CGKR AM +S + A++G G+GY I++A+ + +GP
Sbjct: 60 IFPALVFLGLKNNDCCGCCGNEGCGKRFAMFTSTIFAVVGFLGAGYSFIISAISINKGPK 119
Query: 121 CLDSLGQWNYTFASTEGQYLLDTSTWSECTEPKHIVEWNVSLFSILLALGGIEFILCLIQ 180
CL + W Y F +G YL D + W++C EP ++V WN++LFSILL +GGI+ +LC IQ
Sbjct: 120 CLMANSTWGYPF--HDGDYLNDEALWNKCREPLNVVPWNLTLFSILLVVGGIQMVLCAIQ 177
Query: 181 VINGVLGGICGFC 193
V+NG+LG +CG C
Sbjct: 178 VVNGLLGTLCGDC 190
>gi|21265113 transmembrane 4 superfamily member 5 [Homo sapiens]
Length = 197
Score = 195 bits (496), Expect = 2e-50
Identities = 93/197 (47%), Positives = 121/197 (61%), Gaps = 4/197 (2%)
Query: 1 MCYGKCARCIGHSLVGLALLCIAANILLYFPNGETKYASENHLSRFVWFFSGIVGGGLLM 60
MC GKCARC+G SL+ L L+CI AN LL PNGET + + NHLS VW G +GGGL++
Sbjct: 1 MCTGKCARCVGLSLITLCLVCIVANALLLVPNGETSWTNTNHLSLQVWLMGGFIGGGLMV 60
Query: 61 LLPAFVFIGLEQDDCCGCCGHENCGKRCAMLSSVLAALIGIAGSGYCVIVAALGLAEGPL 120
L P I + GCCG CG RC ML SV ++ G+ G+ YC+ V+ GL GP
Sbjct: 61 LCPG---IAAVRAGGKGCCGAGCCGNRCRMLRSVFSSAFGVLGAIYCLSVSGAGLRNGPR 117
Query: 121 CLDSLGQWNYTFASTEGQYLLDTSTWSECTEPKHIVEWNVSLFSILLALGGIEFILCLIQ 180
CL + G+W Y F T G YLL+ + W C P +V WNV+LFS+L+A +E +LC IQ
Sbjct: 118 CLMN-GEWGYHFEDTAGAYLLNRTLWDRCEAPPRVVPWNVTLFSLLVAASCLEIVLCGIQ 176
Query: 181 VINGVLGGICGFCCSHQ 197
++N +G CG C Q
Sbjct: 177 LVNATIGVFCGDCRKKQ 193
>gi|20270327 transmembrane 4 L six family member 18 [Homo sapiens]
Length = 201
Score = 192 bits (489), Expect = 1e-49
Identities = 88/187 (47%), Positives = 125/187 (66%), Gaps = 1/187 (0%)
Query: 5 KCARCIGHSLVGLALLCIAANILLYFPNGETKYASENHLSRFVWFFSGIVGGGLLMLLPA 64
KC C+ L+ LAL I NILLYFPNG+T YAS N L+ +VW+F GI G++ML+
Sbjct: 5 KCGGCLSCLLIPLALWSIIVNILLYFPNGQTSYASSNKLTNYVWYFEGICFSGIMMLIVT 64
Query: 65 FVFIGLEQDDCCGCCGHENCGKRCAMLSSVLAALIGIAGSGYCVIVAALGLAEGPLCLDS 124
V + LE ++ CC ENC K+ L S++ + +GIA SGYC++++ALGL +GP C +
Sbjct: 65 TVLLVLENNNNYKCCQSENCSKKYVTLLSIIFSSLGIAFSGYCLVISALGLVQGPYC-RT 123
Query: 125 LGQWNYTFASTEGQYLLDTSTWSECTEPKHIVEWNVSLFSILLALGGIEFILCLIQVING 184
L W Y F T G++L D+S W +C EP H+VEWN+ LFSIL+ L G++ I+CLI+V+
Sbjct: 124 LDGWEYAFEGTAGRFLTDSSIWIQCLEPAHVVEWNIILFSILITLSGLQVIICLIRVVMQ 183
Query: 185 VLGGICG 191
+ +CG
Sbjct: 184 LSKILCG 190
>gi|115511028 transmembrane 4 L six family member 19 [Homo sapiens]
Length = 209
Score = 100 bits (250), Expect = 6e-22
Identities = 67/202 (33%), Positives = 95/202 (47%), Gaps = 22/202 (10%)
Query: 6 CARCIGHSLVGLALLCIAANILLYFPNGETKYASENHLSRFVWFFSGIVGGGLLMLLPAF 65
C+R +G SL AL AN+ L PN + Y L R +G+ GGGL M+L A
Sbjct: 14 CSRILGLSLGTAALFAAGANVALLLPNWDVTYLLRGLLGRHAMLGTGLWGGGL-MVLTAA 72
Query: 66 VFIGLEQDDCCGCCGHENCGKRCAMLSSVLAALIG----IAGSGYCVIVAALGLAEGPLC 121
+ I L C + + SVL AL+ + G+ C + + + L +GP C
Sbjct: 73 ILISLMG-------WRYGCFSKSGLCRSVLTALLSGGLALLGALICFVTSGVALKDGPFC 125
Query: 122 LDSLGQWNYTFASTEG---------QYLLDTSTW-SECTEPKHIVEWNVSLFSILLALGG 171
+ + +N T A G YL D S W S C EP V W+VSLFS LL +
Sbjct: 126 MFDVSSFNQTQAWKYGYPFKDLHSRNYLYDRSLWNSVCLEPSAAVVWHVSLFSALLCISL 185
Query: 172 IEFILCLIQVINGVLGGICGFC 193
++ +L ++ VIN +LG C C
Sbjct: 186 LQLLLVVVHVINSLLGLFCSLC 207
>gi|188528611 transmembrane 4 L six family member 20 [Homo sapiens]
Length = 229
Score = 60.1 bits (144), Expect = 1e-09
Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 46/220 (20%)
Query: 9 CIGHSLVGLALLCIAANIL-LYFPNGETKYASENHLSRFVWFFSGIVGGGLLMLLPAFVF 67
C G SL+ L LL + N + L E S+N +S F W+F GI+G G LM +PA
Sbjct: 10 CNGFSLLVLLLLGVVLNAIPLIVSLVEEDQFSQNPISCFEWWFPGIIGAG-LMAIPATTM 68
Query: 68 IGLEQDDCCGCCGHENCGKRCAMLSSVLAALIGIAGSGYCVIVAALGLAEGPLCLDSLG- 126
+ C C R M S L ++I + G+ YC++++ L +GPL +S
Sbjct: 69 SLTARKRAC-------CNNRTGMFLSSLFSVITVIGALYCMLISIQALLKGPLMCNSPSN 121
Query: 127 ----------------------QWNY-------------TFASTEGQYLLDTSTWSECTE 151
QW + T T +S + E
Sbjct: 122 SNANCEFSLKNISDIHPESFNLQWFFNDSCAPPTGFNKPTSNDTMASGWRASSFHFDSEE 181
Query: 152 PKHIVEWNVSLFSILLALGGIEFILCLIQVINGVLGGICG 191
KH + + S+F LL +G +E + L Q++ G LG +CG
Sbjct: 182 NKHRL-IHFSVFLGLLLVGILEVLFGLSQIVIGFLGCLCG 220
>gi|16118240 keratin associated protein 9.2 [Homo sapiens]
Length = 174
Score = 30.4 bits (67), Expect = 1.1
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 72 QDDCCG--CCGHENCGKRCAMLSS 93
Q CCG CCG +CG C SS
Sbjct: 87 QPTCCGSSCCGQTSCGSSCGQSSS 110
>gi|169212028 PREDICTED: keratin-associated protein 9-2-like 2-like
[Homo sapiens]
Length = 160
Score = 29.6 bits (65), Expect = 1.8
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 72 QDDCCG--CCGHENCGKRCAMLSS 93
Q CCG CCG +CG C SS
Sbjct: 87 QPICCGSSCCGQTSCGSSCGQSSS 110
>gi|224994189 prominin 1 isoform 2 [Homo sapiens]
Length = 856
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 48 WFFSGIVGGGLLMLLPAFVFIGLEQDDCCGCCGHE 82
W+ G+V LL L+ F ++GL CG CG++
Sbjct: 425 WWLGGLVICSLLTLIVIFYYLGL----LCGVCGYD 455
>gi|67003568 skin-specific protein 32 [Homo sapiens]
Length = 250
Score = 29.3 bits (64), Expect = 2.4
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 11/53 (20%)
Query: 71 EQDDCCGCCGHENCGKRCAMLSSVLAALIGIAGSGYCVIVAALGLAEGPLCLD 123
E GCCG CG C G SG C + + GP C D
Sbjct: 202 ENSGSSGCCGSGGCGCSC-----------GCGSSGCCCLGIIPMRSRGPACCD 243
>gi|224994199 prominin 1 isoform 4 [Homo sapiens]
Length = 825
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 48 WFFSGIVGGGLLMLLPAFVFIGLEQDDCCGCCGHE 82
W+ G+V LL L+ F ++GL CG CG++
Sbjct: 425 WWLGGLVICSLLTLIVIFYYLGL----LCGVCGYD 455
>gi|224994197 prominin 1 isoform 5 [Homo sapiens]
Length = 833
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 48 WFFSGIVGGGLLMLLPAFVFIGLEQDDCCGCCGHE 82
W+ G+V LL L+ F ++GL CG CG++
Sbjct: 425 WWLGGLVICSLLTLIVIFYYLGL----LCGVCGYD 455
>gi|224994195 prominin 1 isoform 6 [Homo sapiens]
Length = 834
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 48 WFFSGIVGGGLLMLLPAFVFIGLEQDDCCGCCGHE 82
W+ G+V LL L+ F ++GL CG CG++
Sbjct: 434 WWLGGLVICSLLTLIVIFYYLGL----LCGVCGYD 464
>gi|224994193 prominin 1 isoform 7 [Homo sapiens]
Length = 842
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 48 WFFSGIVGGGLLMLLPAFVFIGLEQDDCCGCCGHE 82
W+ G+V LL L+ F ++GL CG CG++
Sbjct: 434 WWLGGLVICSLLTLIVIFYYLGL----LCGVCGYD 464
>gi|224994191 prominin 1 isoform 2 [Homo sapiens]
Length = 856
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 48 WFFSGIVGGGLLMLLPAFVFIGLEQDDCCGCCGHE 82
W+ G+V LL L+ F ++GL CG CG++
Sbjct: 425 WWLGGLVICSLLTLIVIFYYLGL----LCGVCGYD 455
>gi|5174387 prominin 1 isoform 1 [Homo sapiens]
Length = 865
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 48 WFFSGIVGGGLLMLLPAFVFIGLEQDDCCGCCGHE 82
W+ G+V LL L+ F ++GL CG CG++
Sbjct: 434 WWLGGLVICSLLTLIVIFYYLGL----LCGVCGYD 464
>gi|169212012 PREDICTED: keratin-associated protein 9-2-like 1-like
[Homo sapiens]
Length = 169
Score = 29.3 bits (64), Expect = 2.4
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 72 QDDCCG--CCGHENCGKRCAMLSS 93
Q CCG CCG +CG C SS
Sbjct: 82 QPICCGSSCCGQTSCGSSCCQPSS 105
>gi|237874289 TLC domain containing 1 isoform 2 [Homo sapiens]
Length = 200
Score = 28.9 bits (63), Expect = 3.1
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 13/63 (20%)
Query: 13 SLVGLALLCIAANILLY-----FPNGETKYASE---NHLSRFVWFFSGI-----VGGGLL 59
SL G L+C +A ++ +G+T+ + E +H+ FFSGI VGGG+L
Sbjct: 34 SLSGYLLVCFSAGYFIHDTVDIVASGQTRASWEYLVHHVMAMGAFFSGIFWSSFVGGGVL 93
Query: 60 MLL 62
LL
Sbjct: 94 TLL 96
>gi|19923999 TLC domain containing 1 isoform 1 [Homo sapiens]
Length = 247
Score = 28.9 bits (63), Expect = 3.1
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 13/63 (20%)
Query: 13 SLVGLALLCIAANILLY-----FPNGETKYASE---NHLSRFVWFFSGI-----VGGGLL 59
SL G L+C +A ++ +G+T+ + E +H+ FFSGI VGGG+L
Sbjct: 81 SLSGYLLVCFSAGYFIHDTVDIVASGQTRASWEYLVHHVMAMGAFFSGIFWSSFVGGGVL 140
Query: 60 MLL 62
LL
Sbjct: 141 TLL 143
>gi|37588869 ring finger protein 123 [Homo sapiens]
Length = 1314
Score = 28.9 bits (63), Expect = 3.1
Identities = 29/125 (23%), Positives = 42/125 (33%), Gaps = 30/125 (24%)
Query: 70 LEQDDCCGCCGHEN--------CGKRCAMLSSVLAALIGIAGSGYCVIVAALGLAEGPLC 121
L DD G GH N C + L VL + G+ G+C I EG
Sbjct: 107 LVDDDLLGVIGHSNFGTIRSTTCVYKGKWLYEVLISSQGLMQIGWCTISCRFNQEEG--- 163
Query: 122 LDSLGQWNYTFASTEGQYLLDTSTWSECTEPKHIVEWNVSLFSILLALGGIEFILCLIQV 181
T Y D + + +WNV+ + A + + CLI +
Sbjct: 164 ----------VGDTHNSYAYDGN---------RVRKWNVTTTNYGKAWAAGDIVSCLIDL 204
Query: 182 INGVL 186
+G L
Sbjct: 205 DDGTL 209
>gi|157743245 WD repeat domain 43 [Homo sapiens]
Length = 677
Score = 28.5 bits (62), Expect = 4.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 138 QYLLDTSTWSECTEPKHIVEWNV 160
Q+ D+ C++ KHIVEWNV
Sbjct: 133 QWHQDSGCLYSCSDDKHIVEWNV 155
>gi|239756792 PREDICTED: hypothetical protein [Homo sapiens]
Length = 188
Score = 28.1 bits (61), Expect = 5.3
Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
Query: 72 QDDCCG--CCGHENCGKRC 88
Q CCG CCG +CG C
Sbjct: 87 QPTCCGSSCCGQTSCGSSC 105
>gi|239751312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 188
Score = 28.1 bits (61), Expect = 5.3
Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
Query: 72 QDDCCG--CCGHENCGKRC 88
Q CCG CCG +CG C
Sbjct: 87 QPTCCGSSCCGQTSCGSSC 105
>gi|239745809 PREDICTED: hypothetical protein [Homo sapiens]
Length = 188
Score = 28.1 bits (61), Expect = 5.3
Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
Query: 72 QDDCCG--CCGHENCGKRC 88
Q CCG CCG +CG C
Sbjct: 87 QPTCCGSSCCGQTSCGSSC 105
>gi|91106202 G protein-coupled receptor 22 [Homo sapiens]
Length = 433
Score = 28.1 bits (61), Expect = 5.3
Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 9/125 (7%)
Query: 10 IGHSLVGLALLCIAANILLYFPNGETKYASENHLSRFVWFFSGIVGGGLLMLLPAFVFIG 69
+G +L L L C+ +N++ + N ++ + I+ G + L + +
Sbjct: 56 LGSNLTVLVLYCMKSNLI---------NSVSNIITMNLHVLDVIICVGCIPLTIVILLLS 106
Query: 70 LEQDDCCGCCGHENCGKRCAMLSSVLAALIGIAGSGYCVIVAALGLAEGPLCLDSLGQWN 129
LE + CC HE C ++ +++ I + V A L G + + W
Sbjct: 107 LESNTALICCFHEACVSFASVSTAINVFAITLDRYDISVKPANRILTMGRAVMLMISIWI 166
Query: 130 YTFAS 134
++F S
Sbjct: 167 FSFFS 171
>gi|10863973 hepcidin antimicrobial peptide preproprotein [Homo
sapiens]
Length = 84
Score = 27.7 bits (60), Expect = 6.9
Identities = 8/14 (57%), Positives = 8/14 (57%)
Query: 75 CCGCCGHENCGKRC 88
CCGCC CG C
Sbjct: 69 CCGCCHRSKCGMCC 82
>gi|13994372 keratin associated protein 17-1 [Homo sapiens]
Length = 105
Score = 27.7 bits (60), Expect = 6.9
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 11/47 (23%)
Query: 72 QDDCCGCCGH-----------ENCGKRCAMLSSVLAALIGIAGSGYC 107
Q CCGCCG CG C S + G G G C
Sbjct: 25 QPGCCGCCGSCCGCGGSGCGGSGCGGSCCGSSCCGSGCGGCGGCGGC 71
>gi|94536784 coiled-coil domain containing 51 [Homo sapiens]
Length = 411
Score = 27.7 bits (60), Expect = 6.9
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 86 KRCAMLSSVLAALIGIAGSGY 106
K +++ SVL ALIG+AGS Y
Sbjct: 201 KNWSLIGSVLGALIGVAGSTY 221
>gi|134244291 G-protein coupled receptor 37 like 1 [Homo sapiens]
Length = 481
Score = 27.7 bits (60), Expect = 6.9
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 43 LSRFVWFFSGIVGGGLLMLLPAFVFIGLEQDDCCGCCGHENCG 85
+++F FF G + LL+ + +G DCC CC E CG
Sbjct: 400 INQFSTFFKGAITPVLLLCICRP--LGQAFLDCCCCCCCEECG 440
>gi|38348340 diacylglycerol O-acyltransferase 2-like 6 [Homo
sapiens]
Length = 337
Score = 27.7 bits (60), Expect = 6.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 88 CAMLSSVLAALIGIAGSGYCVIVAALGLAEGPLC 121
C + SS L L+ GSG V++ G AE LC
Sbjct: 160 CPVSSSALKYLLTQKGSGNAVVIVVGGAAEALLC 193
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.144 0.491
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,098,631
Number of Sequences: 37866
Number of extensions: 334290
Number of successful extensions: 1026
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 997
Number of HSP's gapped (non-prelim): 36
length of query: 202
length of database: 18,247,518
effective HSP length: 97
effective length of query: 105
effective length of database: 14,574,516
effective search space: 1530324180
effective search space used: 1530324180
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.