| Name: HAMP | Sequence: fasta or formatted (84aa) | NCBI GI: 10863973 | |
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Description: hepcidin antimicrobial peptide preproprotein
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Referenced in: Iron, Copper, and Arsenic Metabolism
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 9.5 8 2 C cysteine 10.7 9 2 D aspartate 2.4 2 1 E glutamate 1.2 1 1 F phenylalanine 4.8 4 1 G glycine 6.0 5 1 H histidine 2.4 2 1 I isoleucine 3.6 3 1 K lysine 2.4 2 1 L leucine 13.1 11 7 M methionine 4.8 4 1 N asparagine 0.0 0 0 P proline 4.8 4 1 Q glutamine 8.3 7 2 R arginine 9.5 8 5 S serine 8.3 7 2 T threonine 4.8 4 1 V valine 1.2 1 1 W tryptophan 2.4 2 1 Y tyrosine 0.0 0 0 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hepcidin antimicrobial peptide preproprotein TM4SF1 0.019 transmembrane 4 superfamily member 1 HIVEP1 0.019 human immunodeficiency virus type I enhancer bindin... KRTAP5-10 0.013 keratin associated protein 5-10 LOC100293952 0.013 PREDICTED: hypothetical protein LOC100287839 0.013 PREDICTED: hypothetical protein XP_002343254 MATN1 0.013 matrilin 1, cartilage matrix protein C9orf169 0.013 hypothetical protein LOC375791 PCDH24 0.006 protocadherin LKC precursor LOC100131830 0.006 PREDICTED: hypothetical protein SIVA1 0.006 CD27-binding (Siva) protein isoform 2 SIVA1 0.006 CD27-binding (Siva) protein isoform 1 TM4SF4 0.006 transmembrane 4 superfamily member 4Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
