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Search of human proteins with 209862847
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209862847 nuclear factor, erythroid derived 2 isoform 2
[Homo sapiens]
(373 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5453774 nuclear factor, erythroid derived 2 isoform 1 [Homo s... 753 0.0
gi|209862847 nuclear factor, erythroid derived 2 isoform 2 [Homo... 753 0.0
gi|20149576 nuclear factor erythroid 2-like 2 isoform 1 [Homo sa... 197 1e-50
gi|224028259 nuclear factor erythroid 2-like 2 isoform 3 [Homo s... 197 1e-50
gi|224028257 nuclear factor erythroid 2-like 2 isoform 2 [Homo s... 197 1e-50
gi|4505379 nuclear factor erythroid 2-like 1 [Homo sapiens] 197 2e-50
gi|225735557 nuclear factor erythroid 2-like 3 [Homo sapiens] 158 9e-39
gi|45827690 BTB and CNC homology 1 transcription factor isoform ... 91 2e-18
gi|4502353 BTB and CNC homology 1 transcription factor isoform a... 91 2e-18
gi|13540490 BTB and CNC homology 1, basic leucine zipper transcr... 88 1e-17
gi|56550067 cAMP responsive element binding protein 3-like 2 [Ho... 53 5e-07
gi|16418355 cAMP responsive element binding protein 3-like 1 [Ho... 52 7e-07
gi|23308699 transcription factor MAFB [Homo sapiens] 50 3e-06
gi|102469037 jun D proto-oncogene [Homo sapiens] 49 7e-06
gi|221139926 NHS-like 1 [Homo sapiens] 48 1e-05
gi|9945318 MAX binding protein [Homo sapiens] 47 3e-05
gi|4758616 jun oncogene [Homo sapiens] 46 6e-05
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 46 6e-05
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 46 6e-05
gi|145309324 FH2 domain containing 1 [Homo sapiens] 45 1e-04
gi|150417989 cyclin K isoform 1 [Homo sapiens] 44 2e-04
gi|160707881 formin 2 [Homo sapiens] 44 2e-04
gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapi... 44 2e-04
gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sap... 44 2e-04
gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapi... 44 2e-04
gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapi... 44 2e-04
gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapi... 44 2e-04
gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapi... 44 2e-04
gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapi... 44 2e-04
gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapi... 44 2e-04
>gi|5453774 nuclear factor, erythroid derived 2 isoform 1 [Homo
sapiens]
Length = 373
Score = 753 bits (1945), Expect = 0.0
Identities = 373/373 (100%), Positives = 373/373 (100%)
Query: 1 MSPCPPQQSRNRVIQLSTSELGEMELTWQEIMSITELQGLNAPSEPSFEPQAPAPYLGPP 60
MSPCPPQQSRNRVIQLSTSELGEMELTWQEIMSITELQGLNAPSEPSFEPQAPAPYLGPP
Sbjct: 1 MSPCPPQQSRNRVIQLSTSELGEMELTWQEIMSITELQGLNAPSEPSFEPQAPAPYLGPP 60
Query: 61 PPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPL 120
PPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPL
Sbjct: 61 PPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPL 120
Query: 121 QDPLALLDIGLPAGPPKPQEDPESDSGLSLNYSDAESLELEGTEAGRRRSEYVEMYPVEY 180
QDPLALLDIGLPAGPPKPQEDPESDSGLSLNYSDAESLELEGTEAGRRRSEYVEMYPVEY
Sbjct: 121 QDPLALLDIGLPAGPPKPQEDPESDSGLSLNYSDAESLELEGTEAGRRRSEYVEMYPVEY 180
Query: 181 PYSLMPNSLAHSNYTLPAAETPLALEPSSGPVRAKPTARGEAGSRDERRALAMKIPFPTD 240
PYSLMPNSLAHSNYTLPAAETPLALEPSSGPVRAKPTARGEAGSRDERRALAMKIPFPTD
Sbjct: 181 PYSLMPNSLAHSNYTLPAAETPLALEPSSGPVRAKPTARGEAGSRDERRALAMKIPFPTD 240
Query: 241 KIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLERELER 300
KIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLERELER
Sbjct: 241 KIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLERELER 300
Query: 301 LTNERERLLRARGEADRTLEVMRQQLTELYRDIFQHLRDESGNSYSPEEYALQQAADGTI 360
LTNERERLLRARGEADRTLEVMRQQLTELYRDIFQHLRDESGNSYSPEEYALQQAADGTI
Sbjct: 301 LTNERERLLRARGEADRTLEVMRQQLTELYRDIFQHLRDESGNSYSPEEYALQQAADGTI 360
Query: 361 FLVPRGTKMEATD 373
FLVPRGTKMEATD
Sbjct: 361 FLVPRGTKMEATD 373
>gi|209862847 nuclear factor, erythroid derived 2 isoform 2 [Homo
sapiens]
Length = 373
Score = 753 bits (1945), Expect = 0.0
Identities = 373/373 (100%), Positives = 373/373 (100%)
Query: 1 MSPCPPQQSRNRVIQLSTSELGEMELTWQEIMSITELQGLNAPSEPSFEPQAPAPYLGPP 60
MSPCPPQQSRNRVIQLSTSELGEMELTWQEIMSITELQGLNAPSEPSFEPQAPAPYLGPP
Sbjct: 1 MSPCPPQQSRNRVIQLSTSELGEMELTWQEIMSITELQGLNAPSEPSFEPQAPAPYLGPP 60
Query: 61 PPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPL 120
PPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPL
Sbjct: 61 PPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPL 120
Query: 121 QDPLALLDIGLPAGPPKPQEDPESDSGLSLNYSDAESLELEGTEAGRRRSEYVEMYPVEY 180
QDPLALLDIGLPAGPPKPQEDPESDSGLSLNYSDAESLELEGTEAGRRRSEYVEMYPVEY
Sbjct: 121 QDPLALLDIGLPAGPPKPQEDPESDSGLSLNYSDAESLELEGTEAGRRRSEYVEMYPVEY 180
Query: 181 PYSLMPNSLAHSNYTLPAAETPLALEPSSGPVRAKPTARGEAGSRDERRALAMKIPFPTD 240
PYSLMPNSLAHSNYTLPAAETPLALEPSSGPVRAKPTARGEAGSRDERRALAMKIPFPTD
Sbjct: 181 PYSLMPNSLAHSNYTLPAAETPLALEPSSGPVRAKPTARGEAGSRDERRALAMKIPFPTD 240
Query: 241 KIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLERELER 300
KIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLERELER
Sbjct: 241 KIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLERELER 300
Query: 301 LTNERERLLRARGEADRTLEVMRQQLTELYRDIFQHLRDESGNSYSPEEYALQQAADGTI 360
LTNERERLLRARGEADRTLEVMRQQLTELYRDIFQHLRDESGNSYSPEEYALQQAADGTI
Sbjct: 301 LTNERERLLRARGEADRTLEVMRQQLTELYRDIFQHLRDESGNSYSPEEYALQQAADGTI 360
Query: 361 FLVPRGTKMEATD 373
FLVPRGTKMEATD
Sbjct: 361 FLVPRGTKMEATD 373
>gi|20149576 nuclear factor erythroid 2-like 2 isoform 1 [Homo
sapiens]
Length = 605
Score = 197 bits (502), Expect = 1e-50
Identities = 149/419 (35%), Positives = 213/419 (50%), Gaps = 75/419 (17%)
Query: 23 EMELTWQEIMSITELQGLNAPSEPSFEP-QAPAPYLG-------------PPPPTTYCPC 68
++E W+E++SI ELQ LN ++ E P+P P C
Sbjct: 183 DIEQVWEELLSIPELQCLNIENDKLVETTMVPSPEAKLTEVDNYHFYSSIPSMEKEVGNC 242
Query: 69 SIHPDSGFP-------LPPPPYELPAST--------SHVPDPPYSY----GNMAIPVSKP 109
S H + F P +L ++ + D YS +++ + P
Sbjct: 243 SPHFLNAFEDSFSSILSTEDPNQLTVNSLNSDATVNTDFGDEFYSAFIAEPSISNSMPSP 302
Query: 110 LSLSGLLSEPLQDPLALLDIGLPAG-----PPKPQEDPESDSGLSLNYS--------DAE 156
+LS LSE L P+ + D+ L P E +SDSG+SLN S E
Sbjct: 303 ATLSHSLSELLNGPIDVSDLSLCKAFNQNHPESTAEFNDSDSGISLNTSPSVASPEHSVE 362
Query: 157 SLELEGTEAGRRRSEYVEMYPVEYPYSLM---PNSLAHSNYTL----------------- 196
S T G SE E+ P S+ P + HS+ +
Sbjct: 363 SSSYGDTLLGLSDSEVEELDSA--PGSVKQNGPKTPVHSSGDMVQPLSPSQGQSTHVHDA 420
Query: 197 -----PAAETPLALEPSSGP-VRAKPTARGEAG-SRDERRALAMKIPFPTDKIVNLPVDD 249
P E P++ P + K ++R EA +RDE RA A+ IPFP +KI+NLPV D
Sbjct: 421 QCENTPEKELPVSPGHRKTPFTKDKHSSRLEAHLTRDELRAKALHIPFPVEKIINLPVVD 480
Query: 250 FNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLERELERLTNERERLL 309
FNE++++ E+QLAL+RDIRRRGKNKVAAQNCRKRKLE IV+LE++L+ L +E+E+LL
Sbjct: 481 FNEMMSKEQFNEAQLALIRDIRRRGKNKVAAQNCRKRKLENIVELEQDLDHLKDEKEKLL 540
Query: 310 RARGEADRTLEVMRQQLTELYRDIFQHLRDESGNSYSPEEYALQQAADGTIFLVPRGTK 368
+ +GE D++L ++++QL+ LY ++F LRDE G YSP EY+LQQ DG +FLVP+ K
Sbjct: 541 KEKGENDKSLHLLKKQLSTLYLEVFSMLRDEDGKPYSPSEYSLQQTRDGNVFLVPKSKK 599
>gi|224028259 nuclear factor erythroid 2-like 2 isoform 3 [Homo
sapiens]
Length = 582
Score = 197 bits (502), Expect = 1e-50
Identities = 149/419 (35%), Positives = 213/419 (50%), Gaps = 75/419 (17%)
Query: 23 EMELTWQEIMSITELQGLNAPSEPSFEP-QAPAPYLG-------------PPPPTTYCPC 68
++E W+E++SI ELQ LN ++ E P+P P C
Sbjct: 160 DIEQVWEELLSIPELQCLNIENDKLVETTMVPSPEAKLTEVDNYHFYSSIPSMEKEVGNC 219
Query: 69 SIHPDSGFP-------LPPPPYELPAST--------SHVPDPPYSY----GNMAIPVSKP 109
S H + F P +L ++ + D YS +++ + P
Sbjct: 220 SPHFLNAFEDSFSSILSTEDPNQLTVNSLNSDATVNTDFGDEFYSAFIAEPSISNSMPSP 279
Query: 110 LSLSGLLSEPLQDPLALLDIGLPAG-----PPKPQEDPESDSGLSLNYS--------DAE 156
+LS LSE L P+ + D+ L P E +SDSG+SLN S E
Sbjct: 280 ATLSHSLSELLNGPIDVSDLSLCKAFNQNHPESTAEFNDSDSGISLNTSPSVASPEHSVE 339
Query: 157 SLELEGTEAGRRRSEYVEMYPVEYPYSLM---PNSLAHSNYTL----------------- 196
S T G SE E+ P S+ P + HS+ +
Sbjct: 340 SSSYGDTLLGLSDSEVEELDSA--PGSVKQNGPKTPVHSSGDMVQPLSPSQGQSTHVHDA 397
Query: 197 -----PAAETPLALEPSSGP-VRAKPTARGEAG-SRDERRALAMKIPFPTDKIVNLPVDD 249
P E P++ P + K ++R EA +RDE RA A+ IPFP +KI+NLPV D
Sbjct: 398 QCENTPEKELPVSPGHRKTPFTKDKHSSRLEAHLTRDELRAKALHIPFPVEKIINLPVVD 457
Query: 250 FNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLERELERLTNERERLL 309
FNE++++ E+QLAL+RDIRRRGKNKVAAQNCRKRKLE IV+LE++L+ L +E+E+LL
Sbjct: 458 FNEMMSKEQFNEAQLALIRDIRRRGKNKVAAQNCRKRKLENIVELEQDLDHLKDEKEKLL 517
Query: 310 RARGEADRTLEVMRQQLTELYRDIFQHLRDESGNSYSPEEYALQQAADGTIFLVPRGTK 368
+ +GE D++L ++++QL+ LY ++F LRDE G YSP EY+LQQ DG +FLVP+ K
Sbjct: 518 KEKGENDKSLHLLKKQLSTLYLEVFSMLRDEDGKPYSPSEYSLQQTRDGNVFLVPKSKK 576
>gi|224028257 nuclear factor erythroid 2-like 2 isoform 2 [Homo
sapiens]
Length = 589
Score = 197 bits (502), Expect = 1e-50
Identities = 149/419 (35%), Positives = 213/419 (50%), Gaps = 75/419 (17%)
Query: 23 EMELTWQEIMSITELQGLNAPSEPSFEP-QAPAPYLG-------------PPPPTTYCPC 68
++E W+E++SI ELQ LN ++ E P+P P C
Sbjct: 167 DIEQVWEELLSIPELQCLNIENDKLVETTMVPSPEAKLTEVDNYHFYSSIPSMEKEVGNC 226
Query: 69 SIHPDSGFP-------LPPPPYELPAST--------SHVPDPPYSY----GNMAIPVSKP 109
S H + F P +L ++ + D YS +++ + P
Sbjct: 227 SPHFLNAFEDSFSSILSTEDPNQLTVNSLNSDATVNTDFGDEFYSAFIAEPSISNSMPSP 286
Query: 110 LSLSGLLSEPLQDPLALLDIGLPAG-----PPKPQEDPESDSGLSLNYS--------DAE 156
+LS LSE L P+ + D+ L P E +SDSG+SLN S E
Sbjct: 287 ATLSHSLSELLNGPIDVSDLSLCKAFNQNHPESTAEFNDSDSGISLNTSPSVASPEHSVE 346
Query: 157 SLELEGTEAGRRRSEYVEMYPVEYPYSLM---PNSLAHSNYTL----------------- 196
S T G SE E+ P S+ P + HS+ +
Sbjct: 347 SSSYGDTLLGLSDSEVEELDSA--PGSVKQNGPKTPVHSSGDMVQPLSPSQGQSTHVHDA 404
Query: 197 -----PAAETPLALEPSSGP-VRAKPTARGEAG-SRDERRALAMKIPFPTDKIVNLPVDD 249
P E P++ P + K ++R EA +RDE RA A+ IPFP +KI+NLPV D
Sbjct: 405 QCENTPEKELPVSPGHRKTPFTKDKHSSRLEAHLTRDELRAKALHIPFPVEKIINLPVVD 464
Query: 250 FNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLERELERLTNERERLL 309
FNE++++ E+QLAL+RDIRRRGKNKVAAQNCRKRKLE IV+LE++L+ L +E+E+LL
Sbjct: 465 FNEMMSKEQFNEAQLALIRDIRRRGKNKVAAQNCRKRKLENIVELEQDLDHLKDEKEKLL 524
Query: 310 RARGEADRTLEVMRQQLTELYRDIFQHLRDESGNSYSPEEYALQQAADGTIFLVPRGTK 368
+ +GE D++L ++++QL+ LY ++F LRDE G YSP EY+LQQ DG +FLVP+ K
Sbjct: 525 KEKGENDKSLHLLKKQLSTLYLEVFSMLRDEDGKPYSPSEYSLQQTRDGNVFLVPKSKK 583
>gi|4505379 nuclear factor erythroid 2-like 1 [Homo sapiens]
Length = 772
Score = 197 bits (500), Expect = 2e-50
Identities = 156/466 (33%), Positives = 221/466 (47%), Gaps = 106/466 (22%)
Query: 5 PPQQSRNRVIQLSTSELG--EMELTWQEIMSITELQGLNAP--------SEPSFEPQAPA 54
PP N + L T ++E WQ++MSI E+Q + S P +P +
Sbjct: 289 PPALQNNLLSPLLTGTESPFDLEQQWQDLMSIMEMQAMEVNTSASEILYSAPPGDPLSTN 348
Query: 55 PYLGPPPPTTYCPCSIHPDS------GFPLPPPPYE----------LPASTSHVPD---- 94
L P P S+H S F L P E LP + S+
Sbjct: 349 YSLAPNTPINQ-NVSLHQASLGGCSQDFLLFSPEVESLPVASSSTLLPLAPSNSTSLNST 407
Query: 95 -----------PPYSYG--NMAIPVSKPLSLSGLLSEPLQDPLALLDIGL-----PAGPP 136
PP G N P L GLL E + D ++L+D+ + P
Sbjct: 408 FGSTNLTGLFFPPQLNGTANDTAGPELPDPLGGLLDEAMLDEISLMDLAIEEGFNPVQAS 467
Query: 137 KPQEDPESDSGLSLNYS------------------------------------------- 153
+ +E+ +SDSGLSL+ S
Sbjct: 468 QLEEEFDSDSGLSLDSSHSPSSLSSSEGSSSSSSSSSSSSSSASSSASSSFSEEGAVGYS 527
Query: 154 -DAESLELEGTE-AGRRRSEYVEMYPVEYPYSLMPNSLAH-----SNYT-------LPAA 199
D+E+L+LE E A + EY + + Y + L + N+T L +A
Sbjct: 528 SDSETLDLEEAEGAVGYQPEYSKFCRMSYQDPAQLSCLPYLEHVGHNHTYNMAPSALDSA 587
Query: 200 ETPLALEPSSGPVRAKPTARGEAGSRDERRALAMKIPFPTDKIVNLPVDDFNELLARYPL 259
+ P G + + SRDE RA AMKIPF DKI+NLPV++FNELL++Y L
Sbjct: 588 DLPPPSALKKGSKEKQADFLDKQMSRDEHRARAMKIPFTNDKIINLPVEEFNELLSKYQL 647
Query: 260 TESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLERELERLTNERERLLRARGEADRTL 319
+E+QL+L+RDIRRRGKNK+AAQNCRKRKL+TI+ LER++E L ++ RLLR + E R+L
Sbjct: 648 SEAQLSLIRDIRRRGKNKMAAQNCRKRKLDTILNLERDVEDLQRDKARLLREKVEFLRSL 707
Query: 320 EVMRQQLTELYRDIFQHLRDESGNSYSPEEYALQQAADGTIFLVPR 365
M+Q++ LY+++F LRDE+G YSP +YALQ A DG++ L+PR
Sbjct: 708 RQMKQKVQSLYQEVFGRLRDENGRPYSPSQYALQYAGDGSVLLIPR 753
>gi|225735557 nuclear factor erythroid 2-like 3 [Homo sapiens]
Length = 694
Score = 158 bits (399), Expect = 9e-39
Identities = 75/142 (52%), Positives = 105/142 (73%)
Query: 224 SRDERRALAMKIPFPTDKIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNC 283
SRDE+RA A+ IPF D+IV +PVD FN +L+RY LT+ Q++L+RDIRRRGKNKVAAQNC
Sbjct: 536 SRDEQRAKALHIPFSVDEIVGMPVDSFNSMLSRYYLTDLQVSLIRDIRRRGKNKVAAQNC 595
Query: 284 RKRKLETIVQLERELERLTNERERLLRARGEADRTLEVMRQQLTELYRDIFQHLRDESGN 343
RKRKL+ I+ LE ++ L ++E L R + + ++ + +M+Q+L +LY DIF LRD+ G
Sbjct: 596 RKRKLDIILNLEDDVCNLQAKKETLKREQAQCNKAINIMKQKLHDLYHDIFSRLRDDQGR 655
Query: 344 SYSPEEYALQQAADGTIFLVPR 365
+P YALQ DG+I +VP+
Sbjct: 656 PVNPNHYALQCTHDGSILIVPK 677
>gi|45827690 BTB and CNC homology 1 transcription factor isoform a
[Homo sapiens]
Length = 736
Score = 90.5 bits (223), Expect = 2e-18
Identities = 46/101 (45%), Positives = 65/101 (64%)
Query: 233 MKIPFPTDKIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIV 292
+K+PF +I++L +DF LL + LT QL + DIRRR KN++AAQ CRKRKL+ I
Sbjct: 524 VKLPFNAQRIISLSRNDFQSLLKMHKLTPEQLDCIHDIRRRSKNRIAAQRCRKRKLDCIQ 583
Query: 293 QLERELERLTNERERLLRARGEADRTLEVMRQQLTELYRDI 333
LE E+E+L +E+E LL+ R TL +Q LT L + +
Sbjct: 584 NLESEIEKLQSEKESLLKERDHILSTLGETKQNLTGLCQKV 624
>gi|4502353 BTB and CNC homology 1 transcription factor isoform a
[Homo sapiens]
Length = 736
Score = 90.5 bits (223), Expect = 2e-18
Identities = 46/101 (45%), Positives = 65/101 (64%)
Query: 233 MKIPFPTDKIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIV 292
+K+PF +I++L +DF LL + LT QL + DIRRR KN++AAQ CRKRKL+ I
Sbjct: 524 VKLPFNAQRIISLSRNDFQSLLKMHKLTPEQLDCIHDIRRRSKNRIAAQRCRKRKLDCIQ 583
Query: 293 QLERELERLTNERERLLRARGEADRTLEVMRQQLTELYRDI 333
LE E+E+L +E+E LL+ R TL +Q LT L + +
Sbjct: 584 NLESEIEKLQSEKESLLKERDHILSTLGETKQNLTGLCQKV 624
>gi|13540490 BTB and CNC homology 1, basic leucine zipper
transcription factor 2 [Homo sapiens]
Length = 841
Score = 88.2 bits (217), Expect = 1e-17
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 229 RALAMKIPFPTDKIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKL 288
R +K+PFP D+I +LP +DF ++ + LT QL + D+RRR KN++AAQ CRKRKL
Sbjct: 609 RGQEVKLPFPVDQITDLPRNDFQMMIKMHKLTSEQLEFIHDVRRRSKNRIAAQRCRKRKL 668
Query: 289 ETIVQLERELERLTNERERLLRARGEADRTLEVMRQQLT----ELYRDIFQHLRDESGNS 344
+ I LE E+ +L E+E+LL R + + + + E+ RDI + ++ +
Sbjct: 669 DCIQNLECEIRKLVCEKEKLLSERNQLKACMGELLDNFSCLSQEVCRDIQSPEQIQALHR 728
Query: 345 YSP 347
Y P
Sbjct: 729 YCP 731
>gi|56550067 cAMP responsive element binding protein 3-like 2 [Homo
sapiens]
Length = 520
Score = 52.8 bits (125), Expect = 5e-07
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 28/158 (17%)
Query: 183 SLMPNSLAHSNYTLPAAETPLALEP------SSGPVRAKPTARGEAG-----SRDERRAL 231
SL PN H ++LP +P P SS P+ P +G ++R +
Sbjct: 217 SLSPNPRLHP-FSLPQTHSPSRAAPRAPSALSSSPLLTAPHKLQGSGPLVLTEEEKRTLI 275
Query: 232 AMKIPFPTDKIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETI 291
A P PT + PL++S+ ++ IRR+ KNK++AQ R++K E +
Sbjct: 276 AEGYPIPT----------------KLPLSKSEEKALKKIRRKIKNKISAQESRRKKKEYM 319
Query: 292 VQLERELERLTNERERLLRARGEADRTLEVMRQQLTEL 329
LE+++E + E L + + T + QQL +L
Sbjct: 320 DSLEKKVESCSTENLELRKKVEVLENTNRTLLQQLQKL 357
>gi|16418355 cAMP responsive element binding protein 3-like 1 [Homo
sapiens]
Length = 519
Score = 52.4 bits (124), Expect = 7e-07
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 20/151 (13%)
Query: 183 SLMPNSLAHSNYTLPAAETPLALEPS---SGPVRAKPTARGEAGSRDERRAL-AMKIPFP 238
S P SL S+ P A + A+ S + P + + T+ + +E+R L A P P
Sbjct: 219 SQSPRSLPPSSPVRPMARSSTAISTSPLLTAPHKLQGTSGPLLLTEEEKRTLIAEGYPIP 278
Query: 239 TDKIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLEREL 298
T + PLT+++ ++ +RR+ KNK++AQ R++K E + LE+++
Sbjct: 279 T----------------KLPLTKAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKV 322
Query: 299 ERLTNERERLLRARGEADRTLEVMRQQLTEL 329
E T+E L + + + QQL +L
Sbjct: 323 ETFTSENNELWKKVETLENANRTLLQQLQKL 353
>gi|23308699 transcription factor MAFB [Homo sapiens]
Length = 323
Score = 50.1 bits (118), Expect = 3e-06
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 192 SNYTLPAAETPLALEPSSGP-VRAKPTARGEAGSRDERRALAMKIPFPTDKIVNLPVDDF 250
S+ PA + P + P GP A TA G GS ++R F D++V++ V +
Sbjct: 174 SSAASPAQQLPTS-HPGPGPHATASATAAGGNGSVEDR--------FSDDQLVSMSVREL 224
Query: 251 NELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLERELERLTNERERLLR 310
N L + T+ ++ ++ RR KN+ AQ+CR ++++ LE E +L + E+L +
Sbjct: 225 NRHLRGF--TKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQ 282
Query: 311 ARGEADRTLEVMRQQLTELYRDIFQHLRDESGNSYSPE 348
R + + + +L F+ S + SPE
Sbjct: 283 EVSRLARERDAYKVKCEKLANSGFREAGSTSDSPSSPE 320
>gi|102469037 jun D proto-oncogene [Homo sapiens]
Length = 347
Score = 48.9 bits (115), Expect = 7e-06
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 198 AAETPLALEPSSGPVRAKPTARGEAGSRDERRALAMKIPFPTDKIVNLP-VDDFNELLAR 256
AA A EP P P A G R A+K D+ +P V F E
Sbjct: 210 AATVAFAAEPVPFPPPPPPGALGPP------RLAALK-----DEPQTVPDVPSFGESPPL 258
Query: 257 YPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLERELERLTNERERLLRARGEAD 316
P+ ++ R+R +N++AA CRKRKLE I +LE +++ L ++ L
Sbjct: 259 SPIDMDTQERIKAERKRLRNRIAASKCRKRKLERISRLEEKVKTLKSQNTELA------- 311
Query: 317 RTLEVMRQQLTELYRDIFQHL 337
T ++R+Q+ +L + + H+
Sbjct: 312 STASLLREQVAQLKQKVLSHV 332
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 48.1 bits (113), Expect = 1e-05
Identities = 67/237 (28%), Positives = 93/237 (39%), Gaps = 51/237 (21%)
Query: 43 PSEPSFEPQAPAPYLGPPPPTTYC-PCSIHPDSGFPLPPPPYEL---------------P 86
PS P P +P+L PPPP T C S P S PPPP L P
Sbjct: 936 PSPPFPCPADRSPFLPPPPPVTDCSQGSPLPHSPVFPPPPPEALIPFCSPPDWCLSPPRP 995
Query: 87 ASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPLQ----DPLALLDIGLP---AGPP--- 136
A + +PD P S +P+ PL S SEP DP + D P +G P
Sbjct: 996 ALSPILPDSPVS-----LPLPPPLLPS---SEPPPAPPLDPKFMKDTRPPFTNSGQPESS 1047
Query: 137 ----KPQEDPESDSGLSLNYSDAESLEL---------EGTEAGR--RRSEYVEMYPVEYP 181
+P E S + E+L++ G EA + R+ + PV
Sbjct: 1048 RGSLRPPSTKEETSRPPMPLITTEALQMVQLRPVRKNSGAEAAQLSERTAQEQRTPVAPQ 1107
Query: 182 YSLMPNSLAHSNYTL--PAAETPLALEPSSGPVRAKPTARGEAGSRDERRALAMKIP 236
Y L P++ S + +E+ A SS P AK +++G+ GS ER + P
Sbjct: 1108 YHLKPSAFLKSRNSTNEMESESQPASVTSSLPTPAKSSSQGDHGSAAERGGPVSRSP 1164
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 47.0 bits (110), Expect = 3e-05
Identities = 36/102 (35%), Positives = 43/102 (42%), Gaps = 8/102 (7%)
Query: 43 PSEPSFEPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPASTSHV---PDPPYSY 99
P P P AP P L P P T P + +S PLPPPP LPA+ + P P
Sbjct: 66 PLSPPAPPPAPPPPLATPAPLTVIPIPVVTNSPQPLPPPP-PLPAAAQPLPLAPRQPALV 124
Query: 100 GNMAIPVSKPLSLSGLLSEPLQDPLALLDIGL---PAGPPKP 138
G + + +P L P PL L D P G PKP
Sbjct: 125 GAPGLSIKEPAPLPSRPQVPTPAPL-LPDSKATIPPNGSPKP 165
Score = 36.6 bits (83), Expect = 0.037
Identities = 76/338 (22%), Positives = 113/338 (33%), Gaps = 67/338 (19%)
Query: 7 QQSRNRVIQLSTSELGEMELTWQEIMSITELQGLNAPSEPSFEPQAPAPYLGPPPPTTYC 66
QQ R R Q E E ++ S+ L EP E AP L PP P
Sbjct: 19 QQQRAREEQERLRLEQEREQEQKKANSLARLAHTLPVEEPRME--APPLPLSPPAPP--- 73
Query: 67 PCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPLQDPLAL 126
P PPPP PA + +P P + +P PL + ++PL PLA
Sbjct: 74 ----------PAPPPPLATPAPLTVIPIPVVTNSPQPLPPPPPLPAA---AQPL--PLAP 118
Query: 127 LDIGLPAGPPKPQEDPESDSGLSLNYSDAESLELEGTEAGRRRSEYVEMYPVEYPYSLMP 186
L P GLS+ + + V P L+P
Sbjct: 119 RQPALVGAP-----------GLSI----------------KEPAPLPSRPQVPTPAPLLP 151
Query: 187 NSLAHSNYTLPAAETPLALEPSSGPV----------------RAKPTARGEAGSRDERRA 230
+S A T+P +P L+P PV + P G
Sbjct: 152 DSKA----TIPPNGSPKPLQPLPTPVLTIAPHPGVQPQLAPQQPPPPTLGTLKLAPAEEV 207
Query: 231 LAMKIPFPTDKIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLET 290
+ + I V + E R L E L R+I K + + + L
Sbjct: 208 KSSEQKKRPGGIGTREVHNKLEKNRRAHLKECFETLKRNIPNVDDKKTSNLSVLRTALRY 267
Query: 291 IVQLERELERLTNERERLLRARGEADRTLEVMRQQLTE 328
I L+R+ + +E ERL R + + L ++ +L++
Sbjct: 268 IQSLKRKEKEYEHEMERLAREKIATQQRLAELKHELSQ 305
>gi|4758616 jun oncogene [Homo sapiens]
Length = 331
Score = 45.8 bits (107), Expect = 6e-05
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 258 PLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLERELERLTNERERLLRARGEADR 317
P+ ++ R+R +N++AA CRKRKLE I +LE +++ L + L
Sbjct: 244 PIDMESQERIKAERKRMRNRIAASKCRKRKLERIARLEEKVKTLKAQNSELA-------S 296
Query: 318 TLEVMRQQLTELYRDIFQHL 337
T ++R+Q+ +L + + H+
Sbjct: 297 TANMLREQVAQLKQKVMNHV 316
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 45.8 bits (107), Expect = 6e-05
Identities = 60/218 (27%), Positives = 74/218 (33%), Gaps = 49/218 (22%)
Query: 43 PSEPSFEPQAPAPYLGPPP---------------PTTYCPC--------SIHPDSGFP-L 78
P EP PQA P+L P P P PC + P S P L
Sbjct: 783 PEEPHLSPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCL 842
Query: 79 PP--------PPYELPASTSHVPDPPYSYGNMAIPVSKPL-------SLSGLLSEPLQDP 123
P P E P + PP G P PL SLS LL EP
Sbjct: 843 SPRPEESHLSPELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPSLSPLLGEP---- 898
Query: 124 LALLDIGLPAGPPKPQEDPESDSG---LSLNYSDAESL--ELEGTEAGRRRSEYVEMYPV 178
AL + G P P P+E P S SG LS + L L + +
Sbjct: 899 -ALSEPGEPPLSPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITAAAPPALSPLGEL 957
Query: 179 EYPYSLMPNSLAHSNYTLPAAETPLALEPSSGPVRAKP 216
EYP+ +S S P ETP++ P + +P
Sbjct: 958 EYPFGAKGDSDPESPLAAPILETPISPPPEANCTDPEP 995
Score = 42.4 bits (98), Expect = 7e-04
Identities = 54/186 (29%), Positives = 70/186 (37%), Gaps = 32/186 (17%)
Query: 49 EPQAPAPY------LGPP------PPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPP 96
EPQ AP L PP PP P S P++ L PPP ELPAS +P+
Sbjct: 427 EPQLEAPLNEEMPLLPPPEESPLSPPPEESPTSPPPEAS-RLSPPPEELPASP--LPE-- 481
Query: 97 YSYGNMAIPVSKPLSLSGLLSEPLQDPLALLDIGLPAGP--PKPQEDPESDSGLSLNYSD 154
A+ +S+PL S L P + PL+ P P P PE S
Sbjct: 482 ------ALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPP-----SP 530
Query: 155 AESLELEGTEAGRRRSEYVEMYPVEYPYSLMPNS--LAHSNYTLPAAETPLALEPSSGPV 212
A L S E P+ P +P S S + P E+P++ P P+
Sbjct: 531 ALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPM 590
Query: 213 RAKPTA 218
P A
Sbjct: 591 SPPPEA 596
Score = 41.2 bits (95), Expect = 0.002
Identities = 56/189 (29%), Positives = 67/189 (35%), Gaps = 31/189 (16%)
Query: 43 PSEPSFEPQAPAPYLGPPP---PTTYCPCSIH---PDSGFPLPPPPYELPASTSHVPDPP 96
P E P A L PPP P + P ++H P PL PPP E P S PP
Sbjct: 453 PEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLS------PP 506
Query: 97 YSYGNMAIPVSKPLS--LSGLLSEPLQDPLALLDIGLPAGPP---KPQEDPESDSGLSLN 151
P S P S LS P + P + + P PP P P +S LS
Sbjct: 507 --------PESSPFSPLEESPLSPPEESPPSPA-LETPLSPPPEASPLSPPFEESPLS-- 555
Query: 152 YSDAESLELEGTEAGRRRSEYVEMYPVEYPYSLMPNSLAHSNYTL--PAAETPLALEPSS 209
E L R S E P+ P P S L P E+PL+ P
Sbjct: 556 -PPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEE 614
Query: 210 GPVRAKPTA 218
P+ P A
Sbjct: 615 SPLSPPPEA 623
Score = 41.2 bits (95), Expect = 0.002
Identities = 61/238 (25%), Positives = 82/238 (34%), Gaps = 35/238 (14%)
Query: 41 NAPSEPSFEPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYG 100
++P P E P PP P P S P++ PL PP E P S P P
Sbjct: 509 SSPFSPLEESPLSPPEESPPSPALETPLSPPPEAS-PLSPPFEESPLS----PPPE---- 559
Query: 101 NMAIPVSKPLSLSGLLSEPLQDPLALLDIGLPAGPP------------KPQEDPESDSGL 148
+P S P S L P + P++ P PP P P +S L
Sbjct: 560 --ELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPL 617
Query: 149 SLNYSDAESLELEGTEAGRRRSEYVEMYPVEYP--YSLMPNSLAHSNYTLPAAETPLALE 206
S E+ L S E P+ P S + S + P E+PL+
Sbjct: 618 S---PPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPP 674
Query: 207 PSSGPVRAKPTARGEAGSRDERRALAMKIPFPTDKIVNLPVDDFNELLARYPLTESQL 264
P P P A + ++ + P P D + P +D L PL ES L
Sbjct: 675 PEESPTSPPPEASRLSPPPED----SPTSPPPEDSPASPPPED---SLMSLPLEESPL 725
Score = 37.7 bits (86), Expect = 0.017
Identities = 36/117 (30%), Positives = 44/117 (37%), Gaps = 11/117 (9%)
Query: 36 ELQGLNAPSEPSFEPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPAS------- 88
E L+ P E S P +P P P P P PL PPP E P S
Sbjct: 568 EASRLSPPPEES--PMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASR 625
Query: 89 -TSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPLQDPLALLDIGLPAGPPKPQEDPES 144
+ D P S P+S P +S L P+ L+ P PP P+E P S
Sbjct: 626 LSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPP-PEESPTS 681
Score = 36.6 bits (83), Expect = 0.037
Identities = 36/137 (26%), Positives = 54/137 (39%), Gaps = 7/137 (5%)
Query: 3 PCPPQQSRNRVI-QLSTSELGEMELTWQEIMSITELQGLNAPSEPSFEPQAPAPYLGPPP 61
P P + S + ++ + + SE GE L+ + E L+ EPS PQ P PPP
Sbjct: 884 PPPGEPSLSPLLGEPALSEPGEPPLS-----PLPEELPLSPSGEPSLSPQLMPPDPLPPP 938
Query: 62 PTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPLQ 121
+ + P PL Y A P+ P + + P+S P + EP+
Sbjct: 939 LSPIITAAAPPALS-PLGELEYPFGAKGDSDPESPLAAPILETPISPPPEANCTDPEPVP 997
Query: 122 DPLALLDIGLPAGPPKP 138
+ G P GP P
Sbjct: 998 PMILPPSPGSPVGPASP 1014
Score = 32.7 bits (73), Expect = 0.54
Identities = 33/101 (32%), Positives = 40/101 (39%), Gaps = 13/101 (12%)
Query: 40 LNAPSEPSFEPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSY 99
L+ P E S P +P P P P P P PPP + PAS P P S
Sbjct: 662 LSPPPEES--PLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPAS----PPPEDSL 715
Query: 100 GNMAIPVSKPLSLSGLLSEPLQDPLALLDIGLPAGPPKPQE 140
+S PL S LL P + L G P P+P+E
Sbjct: 716 ------MSLPLEESPLLPLPEEPQLCPRSEG-PHLSPRPEE 749
Score = 29.6 bits (65), Expect = 4.6
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 8/68 (11%)
Query: 37 LQGLNAPSEPSFEPQAPAP--------YLGPPPPTTYCPCSIHPDSGFPLPPPPYELPAS 88
LQ L A P P+ PAP LGP PT P LP P +LP
Sbjct: 4274 LQELGAGPRPQGPPRLPAPPGALSTGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTE 4333
Query: 89 TSHVPDPP 96
P P
Sbjct: 4334 AQLPPTHP 4341
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo
sapiens]
Length = 1792
Score = 45.8 bits (107), Expect = 6e-05
Identities = 57/206 (27%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 38 QGLNAPSEPSFEPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDP-- 95
QG + P+ P F P P P PPP T P + P P PP PA S VP P
Sbjct: 546 QGPSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYS-VPPPGF 604
Query: 96 PYSYGNMAIP-VSKPLSL--SGLLSEPLQDPLALLDIGLPAGPPKPQEDPESDSGLSLNY 152
P + N++ P VS + S + PL+ + K +E +S N
Sbjct: 605 PPAPANLSTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTND 664
Query: 153 SDAESLELEGTEAGRRRSEYVEMYPVEYPYSLMPNSLAHSNYTLPAAETPLALEPSSGPV 212
E +E + + RRRS + PYS +S + S+YT + SG
Sbjct: 665 FAKELMEYKKIQKERRRS----FSRSKSPYS--GSSYSRSSYTYSKSR--------SGST 710
Query: 213 RAKPTARGEAGSRDERRALAMKIPFP 238
R++ +R + SR R+ + P+P
Sbjct: 711 RSRSYSR--SFSRSHSRSYSRSPPYP 734
>gi|145309324 FH2 domain containing 1 [Homo sapiens]
Length = 1143
Score = 45.1 bits (105), Expect = 1e-04
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 34 ITELQGLNAPSEPSF-----EPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPAS 88
+++ + N + P F P AP P PPPP+ C CS P PPPP LP
Sbjct: 10 VSDKENGNIATAPGFMIGQTPPPAPPPPPPPPPPSPPCSCSREECPSSPPPPPPPPLPGE 69
Query: 89 TSHVPDPP 96
P PP
Sbjct: 70 PPIPPPPP 77
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 44.3 bits (103), Expect = 2e-04
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 43 PSEPSFEPQAPAPYLGPPPPTTYCPCSIHPDS-GFPLPPPPYELPASTSHVPDPPYSYGN 101
P P P P P PPPP ++ P +I P + G+P PPP Y + + P PP
Sbjct: 472 PYHPHVYPPNPPPPPVPPPPASFPPPAIPPPTPGYPPPPPTY----NPNFPPPPPRLPPT 527
Query: 102 MAIPVSKPLSLSGLLSEPLQDPLALLDIGLPAGPP 136
A+P P L L P A+ G P PP
Sbjct: 528 HAVPPHPPPGLG--LPPASYPPPAVPPGGQPPVPP 560
Score = 33.9 bits (76), Expect = 0.24
Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 21/105 (20%)
Query: 5 PPQQSRNRVIQLSTSELGEMELTWQEIMSITELQGLNAPSEPSFEPQAPAPYLGPPPPTT 64
PP + + +ST+ +Q + S+ + +G PS+ PA GPP
Sbjct: 421 PPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEG------PSYGALPPA--YGPPAHLP 472
Query: 65 YCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIPVSKP 109
Y HP P PPPP VP PP S+ AIP P
Sbjct: 473 Y-----HPHVYPPNPPPP--------PVPPPPASFPPPAIPPPTP 504
Score = 29.6 bits (65), Expect = 4.6
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 43 PSEPSFEPQAPAPYLGPP----PPTTYCPCSIHPDSGFPLPPP 81
P P P P PP PP +Y P ++ P P+PPP
Sbjct: 519 PPPPRLPPTHAVPPHPPPGLGLPPASYPPPAVPPGGQPPVPPP 561
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 43.9 bits (102), Expect = 2e-04
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 18/116 (15%)
Query: 37 LQGLNAPSEP-----SFEPQAPAPYLGPPPPTTYCPCSIHPDSGFP---LPPPPYELPAS 88
L G P P P P P +G PPP I P P +PPPP P
Sbjct: 1080 LPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPP---PLP 1136
Query: 89 TSHVPDPPYSYGNMAIPVSKPLSLSGLLSEP------LQDPLALLDIGLPAGPPKP 138
+ +P PP + IP PL +G+ P + P L +G+P PP P
Sbjct: 1137 GAGIPPPP-PLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLP 1191
Score = 42.7 bits (99), Expect = 5e-04
Identities = 36/123 (29%), Positives = 46/123 (37%), Gaps = 16/123 (13%)
Query: 23 EMELTWQEIMSITELQGLNAPSEPSF---EPQAPAPYLG----PPPPTTYCPCSIHPDSG 75
E + + + +S N PS P E + P LG PPPP P +
Sbjct: 836 EFQTSHEHSVSSAFKNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTA 895
Query: 76 FPLPPPPYELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPLQDPLALLDIGLPAGP 135
P PPP T +P PP IP PL +G+L P L G+P P
Sbjct: 896 IPQPPP----LQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLP-----PLPGAGIPPPP 946
Query: 136 PKP 138
P P
Sbjct: 947 PLP 949
Score = 42.7 bits (99), Expect = 5e-04
Identities = 36/117 (30%), Positives = 45/117 (38%), Gaps = 18/117 (15%)
Query: 37 LQGLNAPSEP-----SFEPQAPAPYLGPPPPTTYCPCSIHPDSGFP---LPPPPYELPAS 88
L G P P P P P G PPP I P P +PPPP P
Sbjct: 1036 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP---PLP 1092
Query: 89 TSHVPDPPYSYGNMAIPVSKPLSLSGLLSEP------LQDPLALLDIGLPAGPPKPQ 139
+ +P PP G + IP PL +G+ P + P L G+P PP P+
Sbjct: 1093 GAGIPPPPPLPG-VGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPR 1148
Score = 41.6 bits (96), Expect = 0.001
Identities = 36/116 (31%), Positives = 43/116 (37%), Gaps = 18/116 (15%)
Query: 37 LQGLNAPSEP-----SFEPQAPAPYLGPPPPTTYCPCSIHPDSGFP---LPPPPYELPAS 88
L G P P P P P G PPP I P P +PPPP P
Sbjct: 981 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP---PLP 1037
Query: 89 TSHVPDPPYSYGNMAIPVSKPLSLSGLLSEP------LQDPLALLDIGLPAGPPKP 138
+ +P PP G IP PL +G+ P + P L G+P PP P
Sbjct: 1038 GAGIPPPPPLPG-AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1092
Score = 41.2 bits (95), Expect = 0.002
Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 20/123 (16%)
Query: 32 MSITELQGLNAPSEPSFE-------PQAPAPYLGPPPPTTYCPCSIHPDSGFP---LPPP 81
M++ L P P + P P P G PPP I P P +PPP
Sbjct: 886 MTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPP 945
Query: 82 PYELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEP------LQDPLALLDIGLPAGP 135
P P + +P PP G IP+ PL +G+ P + P L G+P P
Sbjct: 946 P---PLPGAAIPPPPPLPG-AGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1001
Query: 136 PKP 138
P P
Sbjct: 1002 PLP 1004
Score = 41.2 bits (95), Expect = 0.002
Identities = 38/124 (30%), Positives = 46/124 (37%), Gaps = 23/124 (18%)
Query: 37 LQGLNAPSEPSFE-----PQAPAPYLGPPPPTTYCPCSIH-----PDSGFPLPPP----- 81
L G P P P P P G PPP +I P +G PLPPP
Sbjct: 915 LPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAG 974
Query: 82 -PYELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEP------LQDPLALLDIGLPAG 134
P P + +P PP G IP PL +G+ P + P L G+P
Sbjct: 975 IPPPPPLPGAGIPPPPPLPG-AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPP 1033
Query: 135 PPKP 138
PP P
Sbjct: 1034 PPLP 1037
Score = 38.5 bits (88), Expect = 0.010
Identities = 36/114 (31%), Positives = 40/114 (35%), Gaps = 13/114 (11%)
Query: 37 LQGLNAPSEP-----SFEPQAPAPYLGPPPPTTYCPCSIHPDSGFP---LPPPPYELPAS 88
L G P P P P P G PPP I P P +PPPP P
Sbjct: 1135 LPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPP---PLP 1191
Query: 89 TSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPLQDPLALLDIGLPAGPPKPQEDP 142
+P PP G IP PL G+ P PL G+P P P P
Sbjct: 1192 GVGIPPPPPLPG-AGIPPPPPLPGMGIPPAP-APPLPPPGTGIPPPPLLPVSGP 1243
Score = 35.4 bits (80), Expect = 0.083
Identities = 33/105 (31%), Positives = 39/105 (37%), Gaps = 20/105 (19%)
Query: 37 LQGLNAPSEP-----SFEPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPASTSH 91
L G+ P P P P P G PPP I P PLPPP +
Sbjct: 1179 LPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPP-------GTG 1231
Query: 92 VPDPPYSYGNMAIPVSKPLSLSGLLSEPLQDP--LALLDIGLPAG 134
+P PP +PVS P L + S L P L LP+G
Sbjct: 1232 IPPPP------LLPVSGPPLLPQVGSSTLPTPQVCGFLPPPLPSG 1270
>gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapiens]
Length = 1955
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 43 PSEPSFEPQAPAPYLGPP---PPTTYCPCSIHPDSGFPLPPPP-YELPASTSHVPDPP 96
P P P APAP PP P + +CP P PLPPP + L STS P PP
Sbjct: 1752 PISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPP 1809
Score = 35.0 bits (79), Expect = 0.11
Identities = 37/111 (33%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 46 PSFEPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIP 105
PS P P P + PP P P + PL PPP P S + PP S ++ +P
Sbjct: 1742 PSACPLPPPPPISPPSP---------PPAPAPLAPPPDISPFS---LFCPPPSPPSIPLP 1789
Query: 106 VSKP------LSLSGLLSEPLQDPLALLDIGLPAGPPK-PQEDPESDSGLS 149
+ P +S SG + PL P LP PP P P S S LS
Sbjct: 1790 LPPPTFFPLSVSTSGPPTPPLLPP---FPTPLPPPPPSIPCPPPPSASFLS 1837
Score = 31.6 bits (70), Expect = 1.2
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 67 PCSIHPDSGFPLPPPP-----YELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPLQ 121
P +I P S PLPPPP PA P P S ++ P P S+ L P
Sbjct: 1737 PPNISP-SACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1795
Query: 122 DPLALLDIGLPAGPPKP 138
PL++ G P P P
Sbjct: 1796 FPLSVSTSGPPTPPLLP 1812
>gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sapiens]
Length = 1932
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 43 PSEPSFEPQAPAPYLGPP---PPTTYCPCSIHPDSGFPLPPPP-YELPASTSHVPDPP 96
P P P APAP PP P + +CP P PLPPP + L STS P PP
Sbjct: 1729 PISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPP 1786
Score = 35.0 bits (79), Expect = 0.11
Identities = 37/111 (33%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 46 PSFEPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIP 105
PS P P P + PP P P + PL PPP P S + PP S ++ +P
Sbjct: 1719 PSACPLPPPPPISPPSP---------PPAPAPLAPPPDISPFS---LFCPPPSPPSIPLP 1766
Query: 106 VSKP------LSLSGLLSEPLQDPLALLDIGLPAGPPK-PQEDPESDSGLS 149
+ P +S SG + PL P LP PP P P S S LS
Sbjct: 1767 LPPPTFFPLSVSTSGPPTPPLLPP---FPTPLPPPPPSIPCPPPPSASFLS 1814
Score = 31.6 bits (70), Expect = 1.2
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 67 PCSIHPDSGFPLPPPP-----YELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPLQ 121
P +I P S PLPPPP PA P P S ++ P P S+ L P
Sbjct: 1714 PPNISP-SACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1772
Query: 122 DPLALLDIGLPAGPPKP 138
PL++ G P P P
Sbjct: 1773 FPLSVSTSGPPTPPLLP 1789
>gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapiens]
Length = 1935
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 43 PSEPSFEPQAPAPYLGPP---PPTTYCPCSIHPDSGFPLPPPP-YELPASTSHVPDPP 96
P P P APAP PP P + +CP P PLPPP + L STS P PP
Sbjct: 1732 PISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPP 1789
Score = 35.0 bits (79), Expect = 0.11
Identities = 37/111 (33%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 46 PSFEPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIP 105
PS P P P + PP P P + PL PPP P S + PP S ++ +P
Sbjct: 1722 PSACPLPPPPPISPPSP---------PPAPAPLAPPPDISPFS---LFCPPPSPPSIPLP 1769
Query: 106 VSKP------LSLSGLLSEPLQDPLALLDIGLPAGPPK-PQEDPESDSGLS 149
+ P +S SG + PL P LP PP P P S S LS
Sbjct: 1770 LPPPTFFPLSVSTSGPPTPPLLPP---FPTPLPPPPPSIPCPPPPSASFLS 1817
Score = 31.6 bits (70), Expect = 1.2
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 67 PCSIHPDSGFPLPPPP-----YELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPLQ 121
P +I P S PLPPPP PA P P S ++ P P S+ L P
Sbjct: 1717 PPNISP-SACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1775
Query: 122 DPLALLDIGLPAGPPKP 138
PL++ G P P P
Sbjct: 1776 FPLSVSTSGPPTPPLLP 1792
>gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapiens]
Length = 1915
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 43 PSEPSFEPQAPAPYLGPP---PPTTYCPCSIHPDSGFPLPPPP-YELPASTSHVPDPP 96
P P P APAP PP P + +CP P PLPPP + L STS P PP
Sbjct: 1712 PISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPP 1769
Score = 35.0 bits (79), Expect = 0.11
Identities = 37/111 (33%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 46 PSFEPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIP 105
PS P P P + PP P P + PL PPP P S + PP S ++ +P
Sbjct: 1702 PSACPLPPPPPISPPSP---------PPAPAPLAPPPDISPFS---LFCPPPSPPSIPLP 1749
Query: 106 VSKP------LSLSGLLSEPLQDPLALLDIGLPAGPPK-PQEDPESDSGLS 149
+ P +S SG + PL P LP PP P P S S LS
Sbjct: 1750 LPPPTFFPLSVSTSGPPTPPLLPP---FPTPLPPPPPSIPCPPPPSASFLS 1797
Score = 31.6 bits (70), Expect = 1.2
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 67 PCSIHPDSGFPLPPPP-----YELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPLQ 121
P +I P S PLPPPP PA P P S ++ P P S+ L P
Sbjct: 1697 PPNISP-SACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1755
Query: 122 DPLALLDIGLPAGPPKP 138
PL++ G P P P
Sbjct: 1756 FPLSVSTSGPPTPPLLP 1772
>gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapiens]
Length = 1952
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 43 PSEPSFEPQAPAPYLGPP---PPTTYCPCSIHPDSGFPLPPPP-YELPASTSHVPDPP 96
P P P APAP PP P + +CP P PLPPP + L STS P PP
Sbjct: 1749 PISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPP 1806
Score = 35.0 bits (79), Expect = 0.11
Identities = 37/111 (33%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 46 PSFEPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIP 105
PS P P P + PP P P + PL PPP P S + PP S ++ +P
Sbjct: 1739 PSACPLPPPPPISPPSP---------PPAPAPLAPPPDISPFS---LFCPPPSPPSIPLP 1786
Query: 106 VSKP------LSLSGLLSEPLQDPLALLDIGLPAGPPK-PQEDPESDSGLS 149
+ P +S SG + PL P LP PP P P S S LS
Sbjct: 1787 LPPPTFFPLSVSTSGPPTPPLLPP---FPTPLPPPPPSIPCPPPPSASFLS 1834
Score = 31.6 bits (70), Expect = 1.2
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 67 PCSIHPDSGFPLPPPP-----YELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPLQ 121
P +I P S PLPPPP PA P P S ++ P P S+ L P
Sbjct: 1734 PPNISP-SACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1792
Query: 122 DPLALLDIGLPAGPPKP 138
PL++ G P P P
Sbjct: 1793 FPLSVSTSGPPTPPLLP 1809
>gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapiens]
Length = 1886
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 43 PSEPSFEPQAPAPYLGPP---PPTTYCPCSIHPDSGFPLPPPP-YELPASTSHVPDPP 96
P P P APAP PP P + +CP P PLPPP + L STS P PP
Sbjct: 1683 PISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPP 1740
Score = 35.0 bits (79), Expect = 0.11
Identities = 37/111 (33%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 46 PSFEPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIP 105
PS P P P + PP P P + PL PPP P S + PP S ++ +P
Sbjct: 1673 PSACPLPPPPPISPPSP---------PPAPAPLAPPPDISPFS---LFCPPPSPPSIPLP 1720
Query: 106 VSKP------LSLSGLLSEPLQDPLALLDIGLPAGPPK-PQEDPESDSGLS 149
+ P +S SG + PL P LP PP P P S S LS
Sbjct: 1721 LPPPTFFPLSVSTSGPPTPPLLPP---FPTPLPPPPPSIPCPPPPSASFLS 1768
Score = 31.6 bits (70), Expect = 1.2
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 67 PCSIHPDSGFPLPPPP-----YELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPLQ 121
P +I P S PLPPPP PA P P S ++ P P S+ L P
Sbjct: 1668 PPNISP-SACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1726
Query: 122 DPLALLDIGLPAGPPKP 138
PL++ G P P P
Sbjct: 1727 FPLSVSTSGPPTPPLLP 1743
>gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapiens]
Length = 1957
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 43 PSEPSFEPQAPAPYLGPP---PPTTYCPCSIHPDSGFPLPPPP-YELPASTSHVPDPP 96
P P P APAP PP P + +CP P PLPPP + L STS P PP
Sbjct: 1754 PISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPP 1811
Score = 35.0 bits (79), Expect = 0.11
Identities = 37/111 (33%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 46 PSFEPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIP 105
PS P P P + PP P P + PL PPP P S + PP S ++ +P
Sbjct: 1744 PSACPLPPPPPISPPSP---------PPAPAPLAPPPDISPFS---LFCPPPSPPSIPLP 1791
Query: 106 VSKP------LSLSGLLSEPLQDPLALLDIGLPAGPPK-PQEDPESDSGLS 149
+ P +S SG + PL P LP PP P P S S LS
Sbjct: 1792 LPPPTFFPLSVSTSGPPTPPLLPP---FPTPLPPPPPSIPCPPPPSASFLS 1839
Score = 31.6 bits (70), Expect = 1.2
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 67 PCSIHPDSGFPLPPPP-----YELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPLQ 121
P +I P S PLPPPP PA P P S ++ P P S+ L P
Sbjct: 1739 PPNISP-SACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1797
Query: 122 DPLALLDIGLPAGPPKP 138
PL++ G P P P
Sbjct: 1798 FPLSVSTSGPPTPPLLP 1814
>gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapiens]
Length = 1962
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 43 PSEPSFEPQAPAPYLGPP---PPTTYCPCSIHPDSGFPLPPPP-YELPASTSHVPDPP 96
P P P APAP PP P + +CP P PLPPP + L STS P PP
Sbjct: 1759 PISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPP 1816
Score = 35.0 bits (79), Expect = 0.11
Identities = 37/111 (33%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 46 PSFEPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIP 105
PS P P P + PP P P + PL PPP P S + PP S ++ +P
Sbjct: 1749 PSACPLPPPPPISPPSP---------PPAPAPLAPPPDISPFS---LFCPPPSPPSIPLP 1796
Query: 106 VSKP------LSLSGLLSEPLQDPLALLDIGLPAGPPK-PQEDPESDSGLS 149
+ P +S SG + PL P LP PP P P S S LS
Sbjct: 1797 LPPPTFFPLSVSTSGPPTPPLLPP---FPTPLPPPPPSIPCPPPPSASFLS 1844
Score = 31.6 bits (70), Expect = 1.2
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 67 PCSIHPDSGFPLPPPP-----YELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPLQ 121
P +I P S PLPPPP PA P P S ++ P P S+ L P
Sbjct: 1744 PPNISP-SACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTF 1802
Query: 122 DPLALLDIGLPAGPPKP 138
PL++ G P P P
Sbjct: 1803 FPLSVSTSGPPTPPLLP 1819
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.132 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,052,570
Number of Sequences: 37866
Number of extensions: 1109351
Number of successful extensions: 8786
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 600
Number of HSP's that attempted gapping in prelim test: 6027
Number of HSP's gapped (non-prelim): 2322
length of query: 373
length of database: 18,247,518
effective HSP length: 104
effective length of query: 269
effective length of database: 14,309,454
effective search space: 3849243126
effective search space used: 3849243126
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.