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Search of human proteins with 209413749
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209413749 spermatogenesis associated 2 [Homo sapiens]
(520 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5174487 spermatogenesis associated 2 [Homo sapiens] 1055 0.0
gi|209413749 spermatogenesis associated 2 [Homo sapiens] 1055 0.0
gi|31377585 spermatogenesis associated 2-like [Homo sapiens] 70 4e-12
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 40 0.007
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 40 0.007
gi|224586849 sorbin and SH3 domain containing 2 isoform 5 [Homo ... 37 0.057
gi|28195390 tripartite motif-containing 42 [Homo sapiens] 36 0.097
gi|222537714 taxilin beta [Homo sapiens] 34 0.28
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 34 0.28
gi|194733749 sorbin and SH3 domain containing 2 isoform 1 [Homo ... 34 0.28
gi|217035133 hypothetical protein LOC55765 isoform 2 [Homo sapiens] 34 0.28
gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens] 34 0.28
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 34 0.37
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 34 0.37
gi|148839382 ring finger protein 169 [Homo sapiens] 34 0.37
gi|19923354 zinc finger protein 238 isoform 2 [Homo sapiens] 32 1.1
gi|4826974 RNA binding motif protein, Y-linked, family 1, member... 32 1.1
gi|54633344 RNA binding motif protein, Y-linked, family 1, membe... 32 1.1
gi|45439302 zinc finger protein 238 isoform 1 [Homo sapiens] 32 1.1
gi|34303937 RNA binding motif protein, Y-linked, family 1, membe... 32 1.1
gi|56090533 RNA binding motif protein, Y-linked, family 1, membe... 32 1.1
gi|56090529 RNA binding motif protein, Y-linked, family 1, membe... 32 1.1
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 32 1.4
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 32 1.4
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 32 1.4
gi|56090527 RNA binding motif protein, Y-linked, family 1, membe... 32 1.4
gi|109150431 ring finger protein 31 [Homo sapiens] 32 1.8
gi|4504487 histidine rich calcium binding protein precursor [Hom... 32 1.8
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 31 2.4
gi|224586855 sorbin and SH3 domain containing 2 isoform 8 [Homo ... 31 3.1
>gi|5174487 spermatogenesis associated 2 [Homo sapiens]
Length = 520
Score = 1055 bits (2727), Expect = 0.0
Identities = 520/520 (100%), Positives = 520/520 (100%)
Query: 1 MGKPSSMDTKFKDDLFRKYVQFHESKVDTTTSRQRPGSDECLRVAASTLLSLHKVDPFYR 60
MGKPSSMDTKFKDDLFRKYVQFHESKVDTTTSRQRPGSDECLRVAASTLLSLHKVDPFYR
Sbjct: 1 MGKPSSMDTKFKDDLFRKYVQFHESKVDTTTSRQRPGSDECLRVAASTLLSLHKVDPFYR 60
Query: 61 FRLIQFYEVVESSLRSLSSSSLRALHGAFSMLETVGINLFLYPWKKEFRSIKTYTGPFVY 120
FRLIQFYEVVESSLRSLSSSSLRALHGAFSMLETVGINLFLYPWKKEFRSIKTYTGPFVY
Sbjct: 61 FRLIQFYEVVESSLRSLSSSSLRALHGAFSMLETVGINLFLYPWKKEFRSIKTYTGPFVY 120
Query: 121 YVKSTLLEEDIRAILSCMGYTPELGTAYKLRELVETLQVKMVSFELFLAKVECEQMLEIH 180
YVKSTLLEEDIRAILSCMGYTPELGTAYKLRELVETLQVKMVSFELFLAKVECEQMLEIH
Sbjct: 121 YVKSTLLEEDIRAILSCMGYTPELGTAYKLRELVETLQVKMVSFELFLAKVECEQMLEIH 180
Query: 181 SQVKDKGYSELDIVSERKSSAEDVRGCSDALRRRAEGREHLTASMSRVALQKSASERAAK 240
SQVKDKGYSELDIVSERKSSAEDVRGCSDALRRRAEGREHLTASMSRVALQKSASERAAK
Sbjct: 181 SQVKDKGYSELDIVSERKSSAEDVRGCSDALRRRAEGREHLTASMSRVALQKSASERAAK 240
Query: 241 DYYKPRVTKPSRSVDAYDSYWESRKPPLKASLSLRKEPVATDVGDDLKDEIIRPSPSLLT 300
DYYKPRVTKPSRSVDAYDSYWESRKPPLKASLSLRKEPVATDVGDDLKDEIIRPSPSLLT
Sbjct: 241 DYYKPRVTKPSRSVDAYDSYWESRKPPLKASLSLRKEPVATDVGDDLKDEIIRPSPSLLT 300
Query: 301 MASSPHGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTDSEPRATYRRQDALRPDVWLL 360
MASSPHGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTDSEPRATYRRQDALRPDVWLL
Sbjct: 301 MASSPHGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTDSEPRATYRRQDALRPDVWLL 360
Query: 361 RNDAHSLYHKRSPPAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPSAFPSKASTH 420
RNDAHSLYHKRSPPAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPSAFPSKASTH
Sbjct: 361 RNDAHSLYHKRSPPAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPSAFPSKASTH 420
Query: 421 DSLAHGASLREKYPGQTQGLDRLPHLHSKSKPSTTPTSRCGFCNRPGATNTCTQCSKVSC 480
DSLAHGASLREKYPGQTQGLDRLPHLHSKSKPSTTPTSRCGFCNRPGATNTCTQCSKVSC
Sbjct: 421 DSLAHGASLREKYPGQTQGLDRLPHLHSKSKPSTTPTSRCGFCNRPGATNTCTQCSKVSC 480
Query: 481 DACLSAYHYDPCYKKSELHKFMPNNQLNYKSTQLSHLVYR 520
DACLSAYHYDPCYKKSELHKFMPNNQLNYKSTQLSHLVYR
Sbjct: 481 DACLSAYHYDPCYKKSELHKFMPNNQLNYKSTQLSHLVYR 520
>gi|209413749 spermatogenesis associated 2 [Homo sapiens]
Length = 520
Score = 1055 bits (2727), Expect = 0.0
Identities = 520/520 (100%), Positives = 520/520 (100%)
Query: 1 MGKPSSMDTKFKDDLFRKYVQFHESKVDTTTSRQRPGSDECLRVAASTLLSLHKVDPFYR 60
MGKPSSMDTKFKDDLFRKYVQFHESKVDTTTSRQRPGSDECLRVAASTLLSLHKVDPFYR
Sbjct: 1 MGKPSSMDTKFKDDLFRKYVQFHESKVDTTTSRQRPGSDECLRVAASTLLSLHKVDPFYR 60
Query: 61 FRLIQFYEVVESSLRSLSSSSLRALHGAFSMLETVGINLFLYPWKKEFRSIKTYTGPFVY 120
FRLIQFYEVVESSLRSLSSSSLRALHGAFSMLETVGINLFLYPWKKEFRSIKTYTGPFVY
Sbjct: 61 FRLIQFYEVVESSLRSLSSSSLRALHGAFSMLETVGINLFLYPWKKEFRSIKTYTGPFVY 120
Query: 121 YVKSTLLEEDIRAILSCMGYTPELGTAYKLRELVETLQVKMVSFELFLAKVECEQMLEIH 180
YVKSTLLEEDIRAILSCMGYTPELGTAYKLRELVETLQVKMVSFELFLAKVECEQMLEIH
Sbjct: 121 YVKSTLLEEDIRAILSCMGYTPELGTAYKLRELVETLQVKMVSFELFLAKVECEQMLEIH 180
Query: 181 SQVKDKGYSELDIVSERKSSAEDVRGCSDALRRRAEGREHLTASMSRVALQKSASERAAK 240
SQVKDKGYSELDIVSERKSSAEDVRGCSDALRRRAEGREHLTASMSRVALQKSASERAAK
Sbjct: 181 SQVKDKGYSELDIVSERKSSAEDVRGCSDALRRRAEGREHLTASMSRVALQKSASERAAK 240
Query: 241 DYYKPRVTKPSRSVDAYDSYWESRKPPLKASLSLRKEPVATDVGDDLKDEIIRPSPSLLT 300
DYYKPRVTKPSRSVDAYDSYWESRKPPLKASLSLRKEPVATDVGDDLKDEIIRPSPSLLT
Sbjct: 241 DYYKPRVTKPSRSVDAYDSYWESRKPPLKASLSLRKEPVATDVGDDLKDEIIRPSPSLLT 300
Query: 301 MASSPHGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTDSEPRATYRRQDALRPDVWLL 360
MASSPHGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTDSEPRATYRRQDALRPDVWLL
Sbjct: 301 MASSPHGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTDSEPRATYRRQDALRPDVWLL 360
Query: 361 RNDAHSLYHKRSPPAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPSAFPSKASTH 420
RNDAHSLYHKRSPPAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPSAFPSKASTH
Sbjct: 361 RNDAHSLYHKRSPPAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPSAFPSKASTH 420
Query: 421 DSLAHGASLREKYPGQTQGLDRLPHLHSKSKPSTTPTSRCGFCNRPGATNTCTQCSKVSC 480
DSLAHGASLREKYPGQTQGLDRLPHLHSKSKPSTTPTSRCGFCNRPGATNTCTQCSKVSC
Sbjct: 421 DSLAHGASLREKYPGQTQGLDRLPHLHSKSKPSTTPTSRCGFCNRPGATNTCTQCSKVSC 480
Query: 481 DACLSAYHYDPCYKKSELHKFMPNNQLNYKSTQLSHLVYR 520
DACLSAYHYDPCYKKSELHKFMPNNQLNYKSTQLSHLVYR
Sbjct: 481 DACLSAYHYDPCYKKSELHKFMPNNQLNYKSTQLSHLVYR 520
>gi|31377585 spermatogenesis associated 2-like [Homo sapiens]
Length = 424
Score = 70.5 bits (171), Expect = 4e-12
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 81 SLRALHGAFSMLETVGINLFLYPWKKEFRSIKTYTGPFVYYVKSTLLEEDIRAILSCMGY 140
+LR L AF +LE ++L+L PW+KEF +IKT++G +V+ +K L ++ + MGY
Sbjct: 70 ALRGLARAFELLELAAVHLYLLPWRKEFTTIKTFSGGYVHVLKGVLSDDLLLKSFQKMGY 129
Query: 141 TPELGTAYKLRELVETLQVKMVSFELFLAKVECEQMLEIHSQVKDKGYSELDIVSERKSS 200
+ L Q+ V+ F ++ECE + E+ +Q+ +++ R++S
Sbjct: 130 VRRDSHRLMVTALPPACQLVQVALGCFALRLECEILGEVLAQLGTSVLPAEELLQARRAS 189
Query: 201 AEDVRGCSDALRRR 214
DV C L++R
Sbjct: 190 G-DVASCVAWLQQR 202
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 39.7 bits (91), Expect = 0.007
Identities = 47/182 (25%), Positives = 69/182 (37%), Gaps = 15/182 (8%)
Query: 295 SPSLLTMASSPHGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTDSEPRATYRRQDALR 354
S +LT +S+P +P P +PSN P L + + L S P T L
Sbjct: 30 SQPILTRSSTPTLTPSSPPTLTPSNTPTL------TPSNTPTLTPSSTPTLTPSSTPTLT 83
Query: 355 PDVWLLRNDAHSLYHKRSPPAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPSAFP 414
P L R+ +L P+ L+ + L+ S++ + T P+S P+ P
Sbjct: 84 PQPILTRSSTPTL-----TPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTP 138
Query: 415 SKASTHDSLAHGASLREKYPGQTQGLDRLPHLHSKSKPSTTPTSRCGFCNRPGATNTCTQ 474
S T + R P T P L S P+ TP+S P +T T T
Sbjct: 139 SSTPTLTPSSRPILTRSSTPTLTP--SSRPILTRSSTPTLTPSSTPTL--TPSSTPTLTP 194
Query: 475 CS 476
S
Sbjct: 195 SS 196
Score = 36.6 bits (83), Expect = 0.057
Identities = 43/171 (25%), Positives = 64/171 (37%), Gaps = 9/171 (5%)
Query: 295 SPSLLTMASSPHGSPDVLPPASPSNGPALLRGT--YFSTQDDVDLYTDSEPRATYRRQDA 352
SP LT +++P +P P +PSN P L + + L S P T
Sbjct: 100 SPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPT 159
Query: 353 LRPD--VWLLRNDAHSLYHKRSP---PAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPA 407
L P L R+ +L +P P+ L+ + L+ SS S T P+
Sbjct: 160 LTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPS 219
Query: 408 SKPSAFPSKASTHDSLAHGASLREKYPGQTQGLDRLPHLHSKSKPSTTPTS 458
S+P PS T + R P T P L + P+ TP++
Sbjct: 220 SRPILTPSSTPTLTPSSRPILTRSSTPTLTP--SSTPTLTPSNTPTLTPSN 268
Score = 29.3 bits (64), Expect = 9.1
Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 7/132 (5%)
Query: 291 IIRPSPSLLTMASSPHGSPDVLPPASPSNGPALLRGT--YFSTQDDVDLYTDSEPRATYR 348
+ R S LT +S+P +P P +PS+ P L + + L S P T
Sbjct: 168 LTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPS 227
Query: 349 RQDALRPD--VWLLRNDAHSLYHKRSP---PAKESALSKCQSCGLSCSSSLCQRCDSLLT 403
L P L R+ +L +P P+ L+ + L+ S++ S T
Sbjct: 228 STPTLTPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPT 287
Query: 404 CPPASKPSAFPS 415
P+S P+ PS
Sbjct: 288 LTPSSTPTLTPS 299
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 39.7 bits (91), Expect = 0.007
Identities = 47/182 (25%), Positives = 69/182 (37%), Gaps = 15/182 (8%)
Query: 295 SPSLLTMASSPHGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTDSEPRATYRRQDALR 354
S +LT +S+P +P P +PSN P L + + L S P T L
Sbjct: 30 SQPILTRSSTPTLTPSSPPTLTPSNTPTL------TPSNTPTLTPSSTPTLTPSSTPTLT 83
Query: 355 PDVWLLRNDAHSLYHKRSPPAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPSAFP 414
P L R+ +L P+ L+ + L+ S++ + T P+S P+ P
Sbjct: 84 PQPILTRSSTPTL-----TPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTP 138
Query: 415 SKASTHDSLAHGASLREKYPGQTQGLDRLPHLHSKSKPSTTPTSRCGFCNRPGATNTCTQ 474
S T + R P T P L S P+ TP+S P +T T T
Sbjct: 139 SSTPTLTPSSRPILTRSSTPTLTP--SSRPILTRSSTPTLTPSSTPTL--TPSSTPTLTP 194
Query: 475 CS 476
S
Sbjct: 195 SS 196
Score = 36.6 bits (83), Expect = 0.057
Identities = 43/171 (25%), Positives = 64/171 (37%), Gaps = 9/171 (5%)
Query: 295 SPSLLTMASSPHGSPDVLPPASPSNGPALLRGT--YFSTQDDVDLYTDSEPRATYRRQDA 352
SP LT +++P +P P +PSN P L + + L S P T
Sbjct: 100 SPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPT 159
Query: 353 LRPD--VWLLRNDAHSLYHKRSP---PAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPA 407
L P L R+ +L +P P+ L+ + L+ SS S T P+
Sbjct: 160 LTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPS 219
Query: 408 SKPSAFPSKASTHDSLAHGASLREKYPGQTQGLDRLPHLHSKSKPSTTPTS 458
S+P PS T + R P T P L + P+ TP++
Sbjct: 220 SRPILTPSSTPTLTPSSRPILTRSSTPTLTP--SSTPTLTPSNTPTLTPSN 268
Score = 29.3 bits (64), Expect = 9.1
Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 7/132 (5%)
Query: 291 IIRPSPSLLTMASSPHGSPDVLPPASPSNGPALLRGT--YFSTQDDVDLYTDSEPRATYR 348
+ R S LT +S+P +P P +PS+ P L + + L S P T
Sbjct: 168 LTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPS 227
Query: 349 RQDALRPD--VWLLRNDAHSLYHKRSP---PAKESALSKCQSCGLSCSSSLCQRCDSLLT 403
L P L R+ +L +P P+ L+ + L+ S++ S T
Sbjct: 228 STPTLTPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPT 287
Query: 404 CPPASKPSAFPS 415
P+S P+ PS
Sbjct: 288 LTPSSTPTLTPS 299
>gi|224586849 sorbin and SH3 domain containing 2 isoform 5 [Homo
sapiens]
Length = 661
Score = 36.6 bits (83), Expect = 0.057
Identities = 60/240 (25%), Positives = 82/240 (34%), Gaps = 37/240 (15%)
Query: 240 KDYYKPR------VTKPSRSVDAYDSYWESRKPPLKASLSLRKEPVA-TDVGDDLKDEII 292
KD+YK V KP D Y++ + S + P A T L
Sbjct: 164 KDWYKTMFKQIHMVHKPDDDTDMYNTPYTYNAGLYNPPYSAQSHPAAKTQTYRPLSKSHS 223
Query: 293 RPSPSLLTMASSPHGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTD-----SEPRATY 347
SP+ ASSP P V PP P P T D D D SEPR+ +
Sbjct: 224 DNSPNAFKDASSPVPPPHVPPPVPPLR-PRDRSSTEKHDWDPPDRKVDTRKFRSEPRSIF 282
Query: 348 RRQDALRPDVWLLRNDAHSLYHKRSPPAKESALSKCQSCGLSCSSSLCQ-RCDSLLTCPP 406
+ + L H+R PP K + S G+ +SL Q D L P
Sbjct: 283 EYEP----------GKSSILQHERPPPKKPLDYVQDHSSGVFNEASLYQSSIDRSLERPM 332
Query: 407 A-------------SKPSAFPSKASTHDSLAHGASLREKYPGQTQGLDRLPHLHSKSKPS 453
+ S+P+ P + S + + R PG + L + S S PS
Sbjct: 333 SSASMASDFRKRRKSEPAVGPPRGLGDQSASRTSPGRVDLPGSSTTLTKSFTSSSPSSPS 392
>gi|28195390 tripartite motif-containing 42 [Homo sapiens]
Length = 723
Score = 35.8 bits (81), Expect = 0.097
Identities = 42/170 (24%), Positives = 65/170 (38%), Gaps = 27/170 (15%)
Query: 337 LYTDSEPRATYRRQDALRPDVWLLRNDAHSLYHKRSPPAKESALSKCQSCGLSCSSSLCQ 396
++T S+ D +V + ++H + H P L S L C+ SLC+
Sbjct: 111 IHTSSKTALRTGSSDTQVDEVKSIPANSHLVNHLNCPMCSRLRL---HSFMLPCNHSLCE 167
Query: 397 RCDS-------------LLTCPPASKPSAFP--SKASTHDSLAHGASLREKYPGQTQGLD 441
+C +L CP + P +K ++ HG L ++Y Q G
Sbjct: 168 KCLRQLQKHAEVTENFFILICPVCDRSHCMPYSNKMQLPENYLHGR-LTKRYM-QEHG-- 223
Query: 442 RLPHLHSKSKPSTTPTSRCGFC-NRPGATNTCTQCSKVSCDACLSAYHYD 490
+L + S+ P C C NR A C C C+ CL A+H D
Sbjct: 224 ---YLKWRFDRSSGPIL-CQVCRNRRIAYKRCITCRLNLCNDCLKAFHSD 269
>gi|222537714 taxilin beta [Homo sapiens]
Length = 684
Score = 34.3 bits (77), Expect = 0.28
Identities = 42/185 (22%), Positives = 68/185 (36%), Gaps = 30/185 (16%)
Query: 150 LRELVETLQVKMVSFELFLAKVE-----C----EQMLEIHSQVKDKGYSELDIVSERKSS 200
L +++E ++ +E F+ K+ C E+ E+H +++D SE D S+ S
Sbjct: 416 LLDMIEEKALRAKEYECFVMKIGRLENLCRALQEERNELHKKIRDAEISEKDDQSQHNSD 475
Query: 201 AEDVRGCSDALRRRAEGREHLTASMSRVALQKSASERAAKDYYKPRVTKP---SRSVDAY 257
E S AE + ++ +A ++ + T+P S A
Sbjct: 476 EEPESNVSVDQEIDAEEVNSVQTAVKNLATAFMIIHHPESTPHQSKETQPEIGSSQESAD 535
Query: 258 DSYWESRKPPLKASLSLRKEPVATDVGDDLKDEIIRPSPSLLTMASSPHGSPDVLPPASP 317
+ E +PPL S P P L A + GS D PP+
Sbjct: 536 AALKEPEQPPLIPSRDSES-----------------PLPPLTPQAEAEGGS-DAEPPSKA 577
Query: 318 SNGPA 322
SN PA
Sbjct: 578 SNSPA 582
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 34.3 bits (77), Expect = 0.28
Identities = 46/181 (25%), Positives = 66/181 (36%), Gaps = 19/181 (10%)
Query: 299 LTMASSPHGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTDSEPRATYRRQDALRPDVW 358
LT S+P +P P +PSN P L + L S P T L P
Sbjct: 70 LTPCSTPTLTPCSTPTLTPSNTPTL------TPSSTPTLTPSSTPTLTPSSTPTLTP--- 120
Query: 359 LLRNDAHSLYHKRSP---PAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPSAFPS 415
+ +L +P P+ L++ + L+ SS+ S T P+S P+ PS
Sbjct: 121 ---SSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPS 177
Query: 416 KASTHDSLAHGASLREKYPGQTQGLDRLPHLHSKSKPSTTPTSRCGFCNRPGATNTCTQC 475
T + R P T P L S P+ TP++ P +T T T
Sbjct: 178 STPTLTPSSRPILTRSSTPTLTP--SSTPTLTPSSTPTLTPSNTPTLI--PSSTPTLTPS 233
Query: 476 S 476
S
Sbjct: 234 S 234
Score = 33.9 bits (76), Expect = 0.37
Identities = 41/167 (24%), Positives = 63/167 (37%), Gaps = 17/167 (10%)
Query: 295 SPSLLTMASSPHGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTDSEPRATYRRQDALR 354
S LT +S+P +P P +PS+ P L R + L S P T L
Sbjct: 114 STPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSS------TPTLTPSSTPTLTPSSTPTLT 167
Query: 355 PDVWLLRNDAHSLYHKRSP---PAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPS 411
P + +L +P P+ L++ + L+ SS+ S T P++ P+
Sbjct: 168 P------SSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSNTPT 221
Query: 412 AFPSKASTHDSLAHGASLREKYPGQTQGLDRLPHLHSKSKPSTTPTS 458
PS T + P T+ P L S P+ TP+S
Sbjct: 222 LIPSSTPTLTPSSTPTLTPSSRPTLTR--SSTPTLTPSSTPTLTPSS 266
Score = 29.3 bits (64), Expect = 9.1
Identities = 34/134 (25%), Positives = 50/134 (37%), Gaps = 11/134 (8%)
Query: 291 IIRPSPSLLTMASSPHGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTDSEPRATYRRQ 350
+ R S LT +S+P +P P +PS+ P L + L S P T
Sbjct: 142 LTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTL------TPSSTPTLTPSSRPILTRSST 195
Query: 351 DALRPD--VWLLRNDAHSLYHKRSP---PAKESALSKCQSCGLSCSSSLCQRCDSLLTCP 405
L P L + +L +P P+ L+ + L+ SS S T
Sbjct: 196 PTLTPSSTPTLTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPTLTPSSRPTLTRSSTPTLT 255
Query: 406 PASKPSAFPSKAST 419
P+S P+ PS T
Sbjct: 256 PSSTPTLTPSSTPT 269
>gi|194733749 sorbin and SH3 domain containing 2 isoform 1 [Homo
sapiens]
Length = 666
Score = 34.3 bits (77), Expect = 0.28
Identities = 65/258 (25%), Positives = 86/258 (33%), Gaps = 45/258 (17%)
Query: 240 KDYYKPR------VTKPSRSVDAYDSYWESRKPPLKASLSLRKEPVA-TDVGDDLKDEII 292
KD+YK V KP D Y++ + S + P A T L
Sbjct: 141 KDWYKTMFKQIHMVHKPDDDTDMYNTPYTYNAGLYNPPYSAQSHPAAKTQTYRPLSKSHS 200
Query: 293 RPSPSLLTMASSPHGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTD-----SEPRATY 347
SP+ ASSP P V PP P P T D D D SEPR+ +
Sbjct: 201 DNSPNAFKDASSPVPPPHVPPPVPPLR-PRDRSSTEKHDWDPPDRKVDTRKFRSEPRSIF 259
Query: 348 -------------RRQDALRPDVWLLRNDA-----HSLYHKRSPPAKESALSKCQSCGLS 389
R D + PD L N+ L R PP K + S G+
Sbjct: 260 EYEPGKSSILQHERPTDRINPDDIDLENEPWYKFFSELEFGRPPPKKPLDYVQDHSSGVF 319
Query: 390 CSSSLCQ-RCDSLLTCPPA-------------SKPSAFPSKASTHDSLAHGASLREKYPG 435
+SL Q D L P + S+P+ P + S + + R PG
Sbjct: 320 NEASLYQSSIDRSLERPMSSASMASDFRKRRKSEPAVGPPRGLGDQSASRTSPGRVDLPG 379
Query: 436 QTQGLDRLPHLHSKSKPS 453
+ L + S S PS
Sbjct: 380 SSTTLTKSFTSSSPSSPS 397
>gi|217035133 hypothetical protein LOC55765 isoform 2 [Homo sapiens]
Length = 578
Score = 34.3 bits (77), Expect = 0.28
Identities = 63/293 (21%), Positives = 111/293 (37%), Gaps = 39/293 (13%)
Query: 210 ALRRRAEGREHLTASMSRVALQKSASERAAKDYYKPRVTKPSRSVDAYDSYWESRK---P 266
+L R+ + +T + R+ L+++ S +A + + + + + E R+ P
Sbjct: 104 SLERQLALQLQITEAARRLCLEENLSRQARRQRKHSMLQEEKKLQELQRCLVERRRNSEP 163
Query: 267 PLKASLSLRKEPVATD---VGDDL-----KDEIIRPSPSLLTMASSP------------- 305
P A+L L +E A+D + D L + ++ +P P S P
Sbjct: 164 PPAAALPLGRELSASDDSSLSDGLLLEEEESQVPKPPPESPAPPSRPLPPQTLEGLQPTG 223
Query: 306 --HGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTDSEPRATYRRQDALRPDVWLLRND 363
GSP+ P + L Y + + +++S AT + +WLL
Sbjct: 224 PEAGSPERAPVQNSPWKETSLDHPYEKPRKSSEPWSESSSPATTPQDGPSASSLWLLEPA 283
Query: 364 AHSLYHKRSPPA----KESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPSAFPSKAST 419
++ + R P + SA + + G S R DS P SAFP + T
Sbjct: 284 SYHVVPIRGVPGQWQGRTSAPATPEIQGRR-GQSQSLRVDSFRAGPEGRGRSAFPRRRPT 342
Query: 420 HDSLAHGASLREKYPGQTQGLDRLPH--LHSKSKPSTTPTSRCGFCNRPGATN 470
H ++ S +P LPH HS S+ S + S PG+++
Sbjct: 343 HYTVTVPDSC---FPATK---PPLPHAACHSCSEDSGSDVSSISHPTSPGSSS 389
>gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens]
Length = 663
Score = 34.3 bits (77), Expect = 0.28
Identities = 63/293 (21%), Positives = 111/293 (37%), Gaps = 39/293 (13%)
Query: 210 ALRRRAEGREHLTASMSRVALQKSASERAAKDYYKPRVTKPSRSVDAYDSYWESRK---P 266
+L R+ + +T + R+ L+++ S +A + + + + + E R+ P
Sbjct: 189 SLERQLALQLQITEAARRLCLEENLSRQARRQRKHSMLQEEKKLQELQRCLVERRRNSEP 248
Query: 267 PLKASLSLRKEPVATD---VGDDL-----KDEIIRPSPSLLTMASSP------------- 305
P A+L L +E A+D + D L + ++ +P P S P
Sbjct: 249 PPAAALPLGRELSASDDSSLSDGLLLEEEESQVPKPPPESPAPPSRPLPPQTLEGLQPTG 308
Query: 306 --HGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTDSEPRATYRRQDALRPDVWLLRND 363
GSP+ P + L Y + + +++S AT + +WLL
Sbjct: 309 PEAGSPERAPVQNSPWKETSLDHPYEKPRKSSEPWSESSSPATTPQDGPSASSLWLLEPA 368
Query: 364 AHSLYHKRSPPA----KESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPSAFPSKAST 419
++ + R P + SA + + G S R DS P SAFP + T
Sbjct: 369 SYHVVPIRGVPGQWQGRTSAPATPEIQGRR-GQSQSLRVDSFRAGPEGRGRSAFPRRRPT 427
Query: 420 HDSLAHGASLREKYPGQTQGLDRLPH--LHSKSKPSTTPTSRCGFCNRPGATN 470
H ++ S +P LPH HS S+ S + S PG+++
Sbjct: 428 HYTVTVPDSC---FPATK---PPLPHAACHSCSEDSGSDVSSISHPTSPGSSS 474
>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 33.9 bits (76), Expect = 0.37
Identities = 53/198 (26%), Positives = 73/198 (36%), Gaps = 24/198 (12%)
Query: 265 KPPLKASLSLRKEPVATDVGDDLKDEIIRPSPSLLTMASSPHGSPDVLPPASPSNG-PAL 323
K P+ + L ++P + +E P S T S P S P SP + PA
Sbjct: 1312 KGPVPSFSELMEDPDPENPEPTTTNECPSPDTSQNTCKSPPKMSK----PGSPGSVIPAQ 1367
Query: 324 LRGTYFSTQDDV--DLYTDSEPRATYRRQDALRPDVWLLRNDAHSLYHKRSPPAKESALS 381
G F+ D + SE + L+ N A S H PP
Sbjct: 1368 AHGKIFTKPDPQWDSTVSASEAENGVHLKTELQQKQLSNNNQALSKNH---PP------- 1417
Query: 382 KCQSCGLSCSSSLCQRCDSLLT---CPPASKPSAFPSKASTHDSLAHGASLREKYPGQTQ 438
Q+ + S L Q+ S+ T CPP+ P ++ H + HG L K P Q
Sbjct: 1418 --QTHVRNSSEQLSQKLPSVPTKLHCPPSPHLENPPKSSTPHTPVQHG-YLSPKPPSQQL 1474
Query: 439 GLDRLPHLHSKSKPSTTP 456
G PH HS+S TP
Sbjct: 1475 GSPYRPH-HSQSPQVGTP 1491
>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 33.9 bits (76), Expect = 0.37
Identities = 53/198 (26%), Positives = 73/198 (36%), Gaps = 24/198 (12%)
Query: 265 KPPLKASLSLRKEPVATDVGDDLKDEIIRPSPSLLTMASSPHGSPDVLPPASPSNG-PAL 323
K P+ + L ++P + +E P S T S P S P SP + PA
Sbjct: 1312 KGPVPSFSELMEDPDPENPEPTTTNECPSPDTSQNTCKSPPKMSK----PGSPGSVIPAQ 1367
Query: 324 LRGTYFSTQDDV--DLYTDSEPRATYRRQDALRPDVWLLRNDAHSLYHKRSPPAKESALS 381
G F+ D + SE + L+ N A S H PP
Sbjct: 1368 AHGKIFTKPDPQWDSTVSASEAENGVHLKTELQQKQLSNNNQALSKNH---PP------- 1417
Query: 382 KCQSCGLSCSSSLCQRCDSLLT---CPPASKPSAFPSKASTHDSLAHGASLREKYPGQTQ 438
Q+ + S L Q+ S+ T CPP+ P ++ H + HG L K P Q
Sbjct: 1418 --QTHVRNSSEQLSQKLPSVPTKLHCPPSPHLENPPKSSTPHTPVQHG-YLSPKPPSQQL 1474
Query: 439 GLDRLPHLHSKSKPSTTP 456
G PH HS+S TP
Sbjct: 1475 GSPYRPH-HSQSPQVGTP 1491
>gi|148839382 ring finger protein 169 [Homo sapiens]
Length = 708
Score = 33.9 bits (76), Expect = 0.37
Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 13/150 (8%)
Query: 175 QMLEIHSQV---KDKGYSELDIVSERKSSAEDVRGCSDALRRRAEGR-EHLTASMSRVAL 230
QM + H K+ YS + + S E + CSD + RA+ R + + ++V
Sbjct: 258 QMTQTHRSAFVSKNNSYSLAFLAGKLNSKVERSQSCSDTAQERAKSRVRAVPGNKAKVTT 317
Query: 231 QKSASERAAKDYYKPRVTKPSRSVDAYDSYWESRKP----PLKASLSLRKEPVATDVGDD 286
AS T+ +R V A D E R P ASL + V+ + D
Sbjct: 318 MTPASNPIIGVLLS---TQNNRCVSAPDLTIEKRLPFSSLSSLASLHKPERSVSPESNDS 374
Query: 287 LKDEIIRPSPSLLTMASSPHGSPD--VLPP 314
+ +E+ P + + + P PD VL P
Sbjct: 375 ISEELNHFKPIVCSPCTPPKRLPDGRVLSP 404
>gi|19923354 zinc finger protein 238 isoform 2 [Homo sapiens]
Length = 522
Score = 32.3 bits (72), Expect = 1.1
Identities = 42/185 (22%), Positives = 62/185 (33%), Gaps = 16/185 (8%)
Query: 157 LQVKMVSFELFLAKVECEQMLEIHSQVKDKGYSELDIVSERKSSAEDVRGCSDALRRRAE 216
LQ K + E LA M +I K K + ++ ED CSD + ++
Sbjct: 87 LQFKDLPIEDVLAAASYLHMYDIVKVCKKKLKEKATTEADSTKKEEDASSCSDKVESLSD 146
Query: 217 GREHLTASMSRVALQKSASERAAKDYYKPRVTKPSRSVDAYDSYWESRKPPLKASLSL-- 274
G H+ + S+ + K + R + A R P A +
Sbjct: 147 GSSHIAGDL--------PSDEDEGEDEKLNILPSKRDLAAEPGNMWMRLPSDSAGIPQAG 198
Query: 275 -RKEPVATDVGDDLKDEIIRPSPSLLTMASSPHGSPDV-----LPPASPSNGPALLRGTY 328
EP AT G + +S S DV L S +G L +Y
Sbjct: 199 GEAEPHATAAGKTVASPCSSTESLSQRSVTSVRDSADVDCVLDLSVKSSLSGVENLNSSY 258
Query: 329 FSTQD 333
FS+QD
Sbjct: 259 FSSQD 263
>gi|4826974 RNA binding motif protein, Y-linked, family 1, member A1
[Homo sapiens]
Length = 496
Score = 32.3 bits (72), Expect = 1.1
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 184 KDKGYSELDIVSERKSSAEDVRGCSDALRRRAEGREHLTASMSRVALQKSASERAAKDYY 243
+D G+S D S R S D G +AL R + EHL+ S R ALQ+ + A
Sbjct: 352 RDYGHSSWDEHSSRGYSYHD--GYGEALGR--DHSEHLSGSSYRDALQRYGTSHGAPPAR 407
Query: 244 KPRVT-------KPSRSVDAYDSYWES 263
PR++ S + D Y WES
Sbjct: 408 GPRMSYGGSTCHAYSNTRDRYGRSWES 434
>gi|54633344 RNA binding motif protein, Y-linked, family 1, member B
[Homo sapiens]
Length = 496
Score = 32.3 bits (72), Expect = 1.1
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 184 KDKGYSELDIVSERKSSAEDVRGCSDALRRRAEGREHLTASMSRVALQKSASERAAKDYY 243
+D G+S D S R S D G +AL R + EHL+ S R ALQ+ + A
Sbjct: 352 RDYGHSSWDEHSSRGYSYHD--GYGEALGR--DHSEHLSGSSYRDALQRYGTSHGAPPAR 407
Query: 244 KPRVT-------KPSRSVDAYDSYWES 263
PR++ S + D Y WES
Sbjct: 408 GPRMSYGGSTCHAYSNTRDRYGRSWES 434
>gi|45439302 zinc finger protein 238 isoform 1 [Homo sapiens]
Length = 531
Score = 32.3 bits (72), Expect = 1.1
Identities = 42/185 (22%), Positives = 62/185 (33%), Gaps = 16/185 (8%)
Query: 157 LQVKMVSFELFLAKVECEQMLEIHSQVKDKGYSELDIVSERKSSAEDVRGCSDALRRRAE 216
LQ K + E LA M +I K K + ++ ED CSD + ++
Sbjct: 96 LQFKDLPIEDVLAAASYLHMYDIVKVCKKKLKEKATTEADSTKKEEDASSCSDKVESLSD 155
Query: 217 GREHLTASMSRVALQKSASERAAKDYYKPRVTKPSRSVDAYDSYWESRKPPLKASLSL-- 274
G H+ + S+ + K + R + A R P A +
Sbjct: 156 GSSHIAGDL--------PSDEDEGEDEKLNILPSKRDLAAEPGNMWMRLPSDSAGIPQAG 207
Query: 275 -RKEPVATDVGDDLKDEIIRPSPSLLTMASSPHGSPDV-----LPPASPSNGPALLRGTY 328
EP AT G + +S S DV L S +G L +Y
Sbjct: 208 GEAEPHATAAGKTVASPCSSTESLSQRSVTSVRDSADVDCVLDLSVKSSLSGVENLNSSY 267
Query: 329 FSTQD 333
FS+QD
Sbjct: 268 FSSQD 272
>gi|34303937 RNA binding motif protein, Y-linked, family 1, member F
[Homo sapiens]
Length = 496
Score = 32.3 bits (72), Expect = 1.1
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 184 KDKGYSELDIVSERKSSAEDVRGCSDALRRRAEGREHLTASMSRVALQKSASERAAKDYY 243
+D G+S D S R S D G +AL R + EHL+ S R ALQ+ + A
Sbjct: 352 RDYGHSSWDEHSSRGYSYHD--GYGEALGR--DHSEHLSGSSYRDALQRYGTSHGAPPAR 407
Query: 244 KPRVT-------KPSRSVDAYDSYWES 263
PR++ S + D Y WES
Sbjct: 408 GPRMSYGGSTCHAYSNTRDRYGRSWES 434
>gi|56090533 RNA binding motif protein, Y-linked, family 1, member D
[Homo sapiens]
Length = 496
Score = 32.3 bits (72), Expect = 1.1
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 184 KDKGYSELDIVSERKSSAEDVRGCSDALRRRAEGREHLTASMSRVALQKSASERAAKDYY 243
+D G+S D S R S D G +AL R + EHL+ S R ALQ+ + A
Sbjct: 352 RDYGHSSWDEHSSRGYSYHD--GYGEALGR--DHSEHLSGSSYRDALQRYGTSHGAPPAR 407
Query: 244 KPRVT-------KPSRSVDAYDSYWES 263
PR++ S + D Y WES
Sbjct: 408 GPRMSYGGSTCHAYSNTRDRYGRSWES 434
>gi|56090529 RNA binding motif protein, Y-linked, family 1, member J
[Homo sapiens]
Length = 496
Score = 32.3 bits (72), Expect = 1.1
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 184 KDKGYSELDIVSERKSSAEDVRGCSDALRRRAEGREHLTASMSRVALQKSASERAAKDYY 243
+D G+S D S R S D G +AL R + EHL+ S R ALQ+ + A
Sbjct: 352 RDYGHSSWDEHSSRGYSYHD--GYGEALGR--DHSEHLSGSSYRDALQRYGTSHGAPPAR 407
Query: 244 KPRVT-------KPSRSVDAYDSYWES 263
PR++ S + D Y WES
Sbjct: 408 GPRMSYGGSTCHAYSNTRDRYGRSWES 434
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 32.0 bits (71), Expect = 1.4
Identities = 48/219 (21%), Positives = 78/219 (35%), Gaps = 42/219 (19%)
Query: 306 HGSPDVLPPASPSNGPALLRGTYFSTQDDVDL--YTDS--------EPRATYRRQDALRP 355
HGS ++PS AL +Y S+ + + DS E +A++ DA+
Sbjct: 454 HGSTTHTKSSTPSTTAALAHTSYHSSLGSTETTHFRDSSTISGRSEESKASHSSPDAMAT 513
Query: 356 DVWLLRNDAHSLYHKRSP-PAKESALSKCQSCGLSCSSSLCQRCDSLLTCP--------P 406
V + L +P P ++ G + L ++ + + P P
Sbjct: 514 TVLPAGSTPSVLVGDSTPSPISSGSMETTALPGSTTKPGLSEKSTTFYSSPRSPDTTHLP 573
Query: 407 ASKPSAFPSKASTHDSLAHGASLREKYPGQTQGLDRLPHLHSKS--------------KP 452
AS S+ S+ ST G++ +PG T +P L +S P
Sbjct: 574 ASMTSSGVSEESTTSHSRPGSTHTTAFPGST----TMPGLSQESTASHSSPGPTDTTLSP 629
Query: 453 STTPTSRCG-----FCNRPGATNTCTQCSKVSCDACLSA 486
+T S G F +RPG+T T + L A
Sbjct: 630 GSTTASSLGPEYTTFHSRPGSTETTLLPDNTTASGLLEA 668
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 32.0 bits (71), Expect = 1.4
Identities = 48/219 (21%), Positives = 78/219 (35%), Gaps = 42/219 (19%)
Query: 306 HGSPDVLPPASPSNGPALLRGTYFSTQDDVDL--YTDS--------EPRATYRRQDALRP 355
HGS ++PS AL +Y S+ + + DS E +A++ DA+
Sbjct: 533 HGSTTHTKSSTPSTTAALAHTSYHSSLGSTETTHFRDSSTISGRSEESKASHSSPDAMAT 592
Query: 356 DVWLLRNDAHSLYHKRSP-PAKESALSKCQSCGLSCSSSLCQRCDSLLTCP--------P 406
V + L +P P ++ G + L ++ + + P P
Sbjct: 593 TVLPAGSTPSVLVGDSTPSPISSGSMETTALPGSTTKPGLSEKSTTFYSSPRSPDTTHLP 652
Query: 407 ASKPSAFPSKASTHDSLAHGASLREKYPGQTQGLDRLPHLHSKS--------------KP 452
AS S+ S+ ST G++ +PG T +P L +S P
Sbjct: 653 ASMTSSGVSEESTTSHSRPGSTHTTAFPGST----TMPGLSQESTASHSSPGPTDTTLSP 708
Query: 453 STTPTSRCG-----FCNRPGATNTCTQCSKVSCDACLSA 486
+T S G F +RPG+T T + L A
Sbjct: 709 GSTTASSLGPEYTTFHSRPGSTETTLLPDNTTASGLLEA 747
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 32.0 bits (71), Expect = 1.4
Identities = 48/219 (21%), Positives = 78/219 (35%), Gaps = 42/219 (19%)
Query: 306 HGSPDVLPPASPSNGPALLRGTYFSTQDDVDL--YTDS--------EPRATYRRQDALRP 355
HGS ++PS AL +Y S+ + + DS E +A++ DA+
Sbjct: 20 HGSTTHTKSSTPSTTAALAHTSYHSSLGSTETTHFRDSSTISGRSEESKASHSSPDAMAT 79
Query: 356 DVWLLRNDAHSLYHKRSP-PAKESALSKCQSCGLSCSSSLCQRCDSLLTCP--------P 406
V + L +P P ++ G + L ++ + + P P
Sbjct: 80 TVLPAGSTPSVLVGDSTPSPISSGSMETTALPGSTTKPGLSEKSTTFYSSPRSPDTTHLP 139
Query: 407 ASKPSAFPSKASTHDSLAHGASLREKYPGQTQGLDRLPHLHSKS--------------KP 452
AS S+ S+ ST G++ +PG T +P L +S P
Sbjct: 140 ASMTSSGVSEESTTSHSRPGSTHTTAFPGST----TMPGLSQESTASHSSPGPTDTTLSP 195
Query: 453 STTPTSRCG-----FCNRPGATNTCTQCSKVSCDACLSA 486
+T S G F +RPG+T T + L A
Sbjct: 196 GSTTASSLGPEYTTFHSRPGSTETTLLPDNTTASGLLEA 234
>gi|56090527 RNA binding motif protein, Y-linked, family 1, member E
[Homo sapiens]
Length = 496
Score = 32.0 bits (71), Expect = 1.4
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 184 KDKGYSELDIVSERKSSAEDVRGCSDALRRRAEGREHLTASMSRVALQKSASERAAKDYY 243
+D G+S D S R S D G +AL R + EHL+ S R ALQ+ + A
Sbjct: 352 RDYGHSSWDEHSSRGYSYHD--GYGEALGR--DHSEHLSGSSYRDALQRYGTAHGAPPAR 407
Query: 244 KPRVT-------KPSRSVDAYDSYWES 263
PR++ S + D Y WES
Sbjct: 408 GPRMSYGGSTCHAYSNTRDRYGRSWES 434
>gi|109150431 ring finger protein 31 [Homo sapiens]
Length = 1072
Score = 31.6 bits (70), Expect = 1.8
Identities = 27/95 (28%), Positives = 33/95 (34%), Gaps = 25/95 (26%)
Query: 372 SPPAKESALSKCQSCGL--------SCSSSLCQRCDSLLTCPPASKPSAFPSKASTHDSL 423
+P S C CG SC +LC CD L H S
Sbjct: 206 TPSVPGSTPGPCFLCGSAPGTLHCPSCKQALCPACDHLF---------------HGHPSR 250
Query: 424 AHGASLREKYPGQTQGLDRLPHLHSKSKPSTTPTS 458
AH LR+ PG QG P L + ++P TS
Sbjct: 251 AH--HLRQTLPGVLQGTHLSPSLPASAQPRPQSTS 283
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 31.6 bits (70), Expect = 1.8
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 456 PTSRCGFCNRPGATNTCTQCSKVSCDACLSAYHYDPC 492
P S CG+C+ N CT+C CD H D C
Sbjct: 623 PGSLCGYCS---FCNRCTECESCHCDEENMGEHCDQC 656
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 31.2 bits (69), Expect = 2.4
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 7/36 (19%)
Query: 457 TSRCGFCNRPGATNTCTQCSKVSCDACLSAYHYDPC 492
T RC FC GAT C + + C YHY PC
Sbjct: 282 TERCAFCKHLGATIKCCE------EKCTQMYHY-PC 310
>gi|224586855 sorbin and SH3 domain containing 2 isoform 8 [Homo
sapiens]
Length = 492
Score = 30.8 bits (68), Expect = 3.1
Identities = 53/226 (23%), Positives = 77/226 (34%), Gaps = 28/226 (12%)
Query: 240 KDYYKPR------VTKPSRSVDAYDSYWESRKPPLKASLSLRKEPVA-TDVGDDLKDEII 292
KD+YK V KP D Y++ + S + P A T L
Sbjct: 14 KDWYKTMFKQIHMVHKPDDDTDMYNTPYTYNAGLYNPPYSAQSHPAAKTQTYRPLSKSHS 73
Query: 293 RPSPSLLTMASSPHGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTD-----SEPRATY 347
SP+ ASSP P V PP P P T D D D SEPR+ +
Sbjct: 74 DNSPNAFKDASSPVPPPHVPPPVPPLR-PRDRSSTEKHDWDPPDRKVDTRKFRSEPRSIF 132
Query: 348 RRQDALRPDVWLLRNDAHSLYHKRSPPAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPA 407
+ + L H+R +S++ + +S +S S
Sbjct: 133 EYEP----------GKSSILQHERPASLYQSSIDRSLERPMSSASMA-----SDFRKRRK 177
Query: 408 SKPSAFPSKASTHDSLAHGASLREKYPGQTQGLDRLPHLHSKSKPS 453
S+P+ P + S + + R PG + L + S S PS
Sbjct: 178 SEPAVGPPRGLGDQSASRTSPGRVDLPGSSTTLTKSFTSSSPSSPS 223
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,236,840
Number of Sequences: 37866
Number of extensions: 1017483
Number of successful extensions: 4212
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 4085
Number of HSP's gapped (non-prelim): 198
length of query: 520
length of database: 18,247,518
effective HSP length: 107
effective length of query: 413
effective length of database: 14,195,856
effective search space: 5862888528
effective search space used: 5862888528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.