Search of human proteins with 208609993

Search of human proteins with 208609993

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|208609993 methionine sulfoxide reductase A isoform b [Homo
sapiens]
         (195 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|208609993 methionine sulfoxide reductase A isoform b [Homo sa...   406   e-114
gi|6912516 methionine sulfoxide reductase A isoform a [Homo sapi...   386   e-108
gi|208609995 methionine sulfoxide reductase A isoform c [Homo sa...   294   4e-80
gi|4506885 semenogelin II precursor [Homo sapiens]                     32   0.45 
gi|145701005 hypothetical protein LOC375759 [Homo sapiens]             32   0.45 
gi|33457316 pleckstrin homology domain containing, family O memb...    30   1.00 
gi|154937380 hypothetical protein LOC642475 [Homo sapiens]             30   1.00 
gi|59889562 neurotrophic tyrosine kinase, receptor, type 3 isofo...    29   2.2  
gi|59889560 neurotrophic tyrosine kinase, receptor, type 3 isofo...    29   2.2  
gi|55956794 neurotrophic tyrosine kinase, receptor, type 3 isofo...    29   2.2  
gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Ho...    29   2.2  
gi|58331187 T-cell lymphoma invasion and metastasis 2 isoform a ...    29   2.2  
gi|148613886 regulatory factor X domain containing 2 [Homo sapiens]    29   2.2  
gi|42789729 lymphoid-restricted membrane protein [Homo sapiens]        29   2.2  
gi|87298939 hypothetical protein LOC131831 [Homo sapiens]              29   2.9  
gi|7657138 golgi integral membrane protein 4 [Homo sapiens]            29   2.9  
gi|50959176 PTX1 protein [Homo sapiens]                                29   2.9  
gi|28557777 immunoglobulin-like domain containing receptor 1 [Ho...    29   2.9  
gi|226053185 paternally expressed 3 isoform 3 [Homo sapiens]           28   4.9  
gi|226423929 zinc finger, imprinted 2 [Homo sapiens]                   28   4.9  
gi|226423927 zinc finger, imprinted 2 [Homo sapiens]                   28   4.9  
gi|33354273 zinc finger, imprinted 2 [Homo sapiens]                    28   4.9  
gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens]                       28   4.9  
gi|122937472 bicaudal C homolog 1 [Homo sapiens]                       27   8.4  
gi|169203146 PREDICTED: similar to heterogeneous nuclear ribonuc...    27   8.4  
gi|89035135 PREDICTED: similar to heterogeneous nuclear ribonucl...    27   8.4  
gi|89034333 PREDICTED: similar to heterogeneous nuclear ribonucl...    27   8.4  
gi|212549553 interleukin enhancer binding factor 3 isoform d [Ho...    27   8.4  
gi|24234750 interleukin enhancer binding factor 3 isoform a [Hom...    27   8.4  

>gi|208609993 methionine sulfoxide reductase A isoform b [Homo
           sapiens]
          Length = 195

 Score =  406 bits (1043), Expect = e-114
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MLSATRRACQLLLLHSLFPVPRMGNSASNIVSPQEALPGRKEQTPVAAKHHVNGNRTVEP 60
           MLSATRRACQLLLLHSLFPVPRMGNSASNIVSPQEALPGRKEQTPVAAKHHVNGNRTVEP
Sbjct: 1   MLSATRRACQLLLLHSLFPVPRMGNSASNIVSPQEALPGRKEQTPVAAKHHVNGNRTVEP 60

Query: 61  FPEGTQMAVFEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSA 120
           FPEGTQMAVFEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSA
Sbjct: 61  FPEGTQMAVFEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSA 120

Query: 121 IYPTSAKQMEAALSSKENYQKVLSEHGFGPITTDIREGQTFYYAEDYHQQYLSKNPNGYC 180
           IYPTSAKQMEAALSSKENYQKVLSEHGFGPITTDIREGQTFYYAEDYHQQYLSKNPNGYC
Sbjct: 121 IYPTSAKQMEAALSSKENYQKVLSEHGFGPITTDIREGQTFYYAEDYHQQYLSKNPNGYC 180

Query: 181 GLGGTGVSCPVGIKK 195
           GLGGTGVSCPVGIKK
Sbjct: 181 GLGGTGVSCPVGIKK 195


>gi|6912516 methionine sulfoxide reductase A isoform a [Homo
           sapiens]
          Length = 235

 Score =  386 bits (992), Expect = e-108
 Identities = 195/235 (82%), Positives = 195/235 (82%), Gaps = 40/235 (17%)

Query: 1   MLSATRRACQLLLLHSLFPVPRMGNSASNIVSPQEALPGRKEQTPVAAKHHVNGNRTVEP 60
           MLSATRRACQLLLLHSLFPVPRMGNSASNIVSPQEALPGRKEQTPVAAKHHVNGNRTVEP
Sbjct: 1   MLSATRRACQLLLLHSLFPVPRMGNSASNIVSPQEALPGRKEQTPVAAKHHVNGNRTVEP 60

Query: 61  FPEGTQMAVF----------------------------------------EKTGHAEVVR 80
           FPEGTQMAVF                                        EKTGHAEVVR
Sbjct: 61  FPEGTQMAVFGMGCFWGAERKFWVLKGVYSTQVGFAGGYTSNPTYKEVCSEKTGHAEVVR 120

Query: 81  VVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQ 140
           VVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQ
Sbjct: 121 VVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQ 180

Query: 141 KVLSEHGFGPITTDIREGQTFYYAEDYHQQYLSKNPNGYCGLGGTGVSCPVGIKK 195
           KVLSEHGFGPITTDIREGQTFYYAEDYHQQYLSKNPNGYCGLGGTGVSCPVGIKK
Sbjct: 181 KVLSEHGFGPITTDIREGQTFYYAEDYHQQYLSKNPNGYCGLGGTGVSCPVGIKK 235


>gi|208609995 methionine sulfoxide reductase A isoform c [Homo
           sapiens]
          Length = 192

 Score =  294 bits (752), Expect = 4e-80
 Identities = 147/187 (78%), Positives = 147/187 (78%), Gaps = 40/187 (21%)

Query: 49  KHHVNGNRTVEPFPEGTQMAVF-------------------------------------- 70
           KHHVNGNRTVEPFPEGTQMAVF                                      
Sbjct: 6   KHHVNGNRTVEPFPEGTQMAVFGMGCFWGAERKFWVLKGVYSTQVGFAGGYTSNPTYKEV 65

Query: 71  --EKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQ 128
             EKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQ
Sbjct: 66  CSEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQ 125

Query: 129 MEAALSSKENYQKVLSEHGFGPITTDIREGQTFYYAEDYHQQYLSKNPNGYCGLGGTGVS 188
           MEAALSSKENYQKVLSEHGFGPITTDIREGQTFYYAEDYHQQYLSKNPNGYCGLGGTGVS
Sbjct: 126 MEAALSSKENYQKVLSEHGFGPITTDIREGQTFYYAEDYHQQYLSKNPNGYCGLGGTGVS 185

Query: 189 CPVGIKK 195
           CPVGIKK
Sbjct: 186 CPVGIKK 192


>gi|4506885 semenogelin II precursor [Homo sapiens]
          Length = 582

 Score = 31.6 bits (70), Expect = 0.45
 Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 20/133 (15%)

Query: 24  GNSASNIVSPQEALPGRKEQTPVAAKHHVNGNRTVEPFPEGTQMAVFEKTGHAEVVRVVY 83
           G S S+ V   E L   K+Q      H   G+          Q  V  +  H+  ++   
Sbjct: 188 GGSQSSYVLQTEELVVNKQQRETKNSHQNKGHY---------QNVVDVREEHSSKLQTSL 238

Query: 84  QPEHM-----------SFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAA 132
            P H            + ++ L V+ +N   T+ + Q  +HG +     YP+S  +    
Sbjct: 239 HPAHQDRLQHGPKDIFTTQDELLVYNKNQHQTKNLSQDQEHGRKAHKISYPSSRTEERQL 298

Query: 133 LSSKENYQKVLSE 145
              +++ QK +S+
Sbjct: 299 HHGEKSVQKDVSK 311


>gi|145701005 hypothetical protein LOC375759 [Homo sapiens]
          Length = 431

 Score = 31.6 bits (70), Expect = 0.45
 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 1   MLSATRRACQLL-LLHSLFPVPRMGNSASNIVSPQEALPGRKEQ 43
           +L+ATRRA +   LL SL P P +   AS   +P++  PG +E+
Sbjct: 83  LLTATRRAVRKRGLLRSLLPPPLLSAGASRESAPRQPGPGERER 126


>gi|33457316 pleckstrin homology domain containing, family O member
           2 [Homo sapiens]
          Length = 490

 Score = 30.4 bits (67), Expect = 1.00
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 31  VSPQEALPGRKEQTPVAAKHHVNGNRTVEPFPEGTQMAVFEKTGHAEVVRVVYQPEHMSF 90
           ++P+   PG + +TPV  +     + + E  PE  +    +    AE      QP +   
Sbjct: 211 LAPETTSPGDRVETPVGERAPTPVSASSEVSPESQE----DSETPAEEDSGSEQPPNSVL 266

Query: 91  EELLKVFWENHDPTQ 105
            + LKV WEN  P +
Sbjct: 267 PDKLKVSWENPSPQE 281


>gi|154937380 hypothetical protein LOC642475 [Homo sapiens]
          Length = 719

 Score = 30.4 bits (67), Expect = 1.00
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 30 IVSPQEALPGRKEQTPVAAKHHVNGNRTVEPFPEG 64
          + +P EA PGR    P A     + N  +EP PEG
Sbjct: 61 LTAPSEAEPGRGATVPEAGSEPCSLNSALEPAPEG 95


>gi|59889562 neurotrophic tyrosine kinase, receptor, type 3 isoform
           a precursor [Homo sapiens]
          Length = 839

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 48  AKHHVNGNRTVEPFPEGT-QMAVFEKTGHAEVVRVVYQPEHMSF 90
           A   +NG+   EPFPE T    +F++      + V ++PE  +F
Sbjct: 387 ANQTINGHFLKEPFPESTDNFILFDEVSPTPPITVTHKPEEDTF 430


>gi|59889560 neurotrophic tyrosine kinase, receptor, type 3 isoform
           b precursor [Homo sapiens]
          Length = 825

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 48  AKHHVNGNRTVEPFPEGT-QMAVFEKTGHAEVVRVVYQPEHMSF 90
           A   +NG+   EPFPE T    +F++      + V ++PE  +F
Sbjct: 387 ANQTINGHFLKEPFPESTDNFILFDEVSPTPPITVTHKPEEDTF 430


>gi|55956794 neurotrophic tyrosine kinase, receptor, type 3 isoform
           c precursor [Homo sapiens]
          Length = 612

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 48  AKHHVNGNRTVEPFPEGT-QMAVFEKTGHAEVVRVVYQPEHMSF 90
           A   +NG+   EPFPE T    +F++      + V ++PE  +F
Sbjct: 387 ANQTINGHFLKEPFPESTDNFILFDEVSPTPPITVTHKPEEDTF 430


>gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Homo
           sapiens]
          Length = 1288

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 14/50 (28%), Positives = 25/50 (50%)

Query: 1   MLSATRRACQLLLLHSLFPVPRMGNSASNIVSPQEALPGRKEQTPVAAKH 50
           M S+     Q  LL +  P PR+  SA  ++      PG++ ++P + +H
Sbjct: 871 MPSSLSAEAQAFLLRTFEPDPRLRASAQTLLGDPFLQPGKRSRSPSSPRH 920


>gi|58331187 T-cell lymphoma invasion and metastasis 2 isoform a
           [Homo sapiens]
          Length = 1701

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 5/84 (5%)

Query: 58  VEPFPEGTQMAVFEKTGHA-----EVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGND 112
           +E FP         KTG        V   V + +H+S   +  V  +     +G+R+GN+
Sbjct: 881 IEVFPLNVYDVQLTKTGSVCDFGFAVTAQVDERQHLSRIFISDVLPDGLAYGEGLRKGNE 940

Query: 113 HGTQYRSAIYPTSAKQMEAALSSK 136
             T    A+     KQMEA  S K
Sbjct: 941 IMTLNGEAVSDLDLKQMEALFSEK 964


>gi|148613886 regulatory factor X domain containing 2 [Homo sapiens]
          Length = 1460

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 79  VRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKEN 138
           + V+  PEH    +L K  WE     +GM Q + +  Q  S I  +S  Q++A  S +  
Sbjct: 802 ISVMTIPEHSDINDLEKSVWE----LEGMPQ-DTYSQQLHSQIQESSLNQIQAHSSDQLP 856

Query: 139 YQKVLSEHGFGPITTDIRE 157
            Q  L E  F P  +   E
Sbjct: 857 LQSELKE--FEPSVSQTNE 873


>gi|42789729 lymphoid-restricted membrane protein [Homo sapiens]
          Length = 499

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 5/112 (4%)

Query: 11  LLLLHSLFPVPRMGNSASNIVSPQEALPGRKEQTP--VAAKHHVNGNRTVEPFPEGTQMA 68
           L LL SL P+    N A  I+   E       Q    VA++  + G    E        A
Sbjct: 198 LKLLESLTPLCEDDNQAQEIIKKLEKSIKFLSQCAARVASRAEMLGAINQE---SRVSKA 254

Query: 69  VFEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSA 120
           V     H E ++ +Y  EH   EEL +V  +N      +   +D   + RSA
Sbjct: 255 VEVMIQHVENLKRMYAKEHAELEELKQVLLQNERSFNPLEDDDDCQIKKRSA 306


>gi|87298939 hypothetical protein LOC131831 [Homo sapiens]
          Length = 663

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 39  GRKEQTPVAAKHHVNGNRTVEPFPEGTQMAVFEKTGHAEVVRV 81
           G+  +  +  KH+ +G++ +  FP+GT   +F  +G+  ++RV
Sbjct: 418 GKVVRNELLEKHYKHGSKFLTSFPDGTTQ-IFYPSGNLAIIRV 459


>gi|7657138 golgi integral membrane protein 4 [Homo sapiens]
          Length = 696

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 40/156 (25%), Positives = 59/156 (37%), Gaps = 27/156 (17%)

Query: 35  EALPGRKEQTPVAAKHHVNGNRTVEPFPEGTQMAVFEKTGH-----------AEVVRVVY 83
           EA+PGR E T + A  H        P P   ++   E   H            E +  V 
Sbjct: 293 EAVPGRAEDTKLYAPTHKEAEFQAPPEPIQQEVERREPEEHQVEEEHRKALEEEEMEQVG 352

Query: 84  QPEHM------SFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKE 137
           Q EH+      S EE  + + E H+  +       H    R+ +YP SAK M   +  + 
Sbjct: 353 QAEHLEEEHDPSPEEQDREWKEQHEQREAANLLEGHA---RAEVYP-SAKPM---IKFQS 405

Query: 138 NYQKVLSEHGFGPITTDIREGQTF-YYAEDYHQQYL 172
            Y++ L +         + E Q    + E  HQQ L
Sbjct: 406 PYEEQLEQQRLA--VQQVEEAQQLREHQEALHQQRL 439


>gi|50959176 PTX1 protein [Homo sapiens]
          Length = 377

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 13/106 (12%)

Query: 32  SPQEALPGRKE---QTPVAAK--HHVNGNRTVEPFPEGTQMAVFEKTGHAEVVRVV---- 82
           S   ALP R++   Q+P A +   H+  N+    F      A+    GHA +  +V    
Sbjct: 151 STSTALPPREDDSSQSPNACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHES 210

Query: 83  ----YQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPT 124
               ++ +H+SF EL+       D T+ +   ++   QY   + PT
Sbjct: 211 YNFSHRIDHLSFGELVPAIINPLDGTEKIAIDHNQMFQYFITVVPT 256


>gi|28557777 immunoglobulin-like domain containing receptor 1 [Homo
           sapiens]
          Length = 502

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 133 LSSKENYQKVLSEHGFGPITT---DIREGQTFYYAEDYHQQYLSKNPNGY 179
           LSS       L +    PI +   D+REG++ ++  D+HQ+   + P  +
Sbjct: 295 LSSSRRTSDSLHQQWLTPIPSRPWDLREGRSHHHYPDFHQELQDRGPKSW 344


>gi|226053185 paternally expressed 3 isoform 3 [Homo sapiens]
          Length = 1464

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 5/122 (4%)

Query: 28  SNIVSPQEALPGRKEQTPVAAKHHVNGNRTVEPFPEGTQMAVFEKTGHAEVVRVVYQPEH 87
           S++ S  +    R+E +P  + H  +G+R  +       M   ++  H    R    P  
Sbjct: 10  SDVTSDDDMTRNRRESSPPHSVHSFSGDRDWDRRGRSRDMEPRDRWSHTRNPRSRMPPRD 69

Query: 88  MSFEELLKVFW----ENHDPTQGMRQGNDHGTQYRSAI-YPTSAKQMEAALSSKENYQKV 142
           +S   + K  +    E+   ++     +     Y++ +      K       + ENY+K+
Sbjct: 70  LSLPVVAKTSFEMDREDDRDSRAYESRSQDAESYQNVVDLAEDRKPHNTIQDNMENYRKL 129

Query: 143 LS 144
           LS
Sbjct: 130 LS 131


>gi|226423929 zinc finger, imprinted 2 [Homo sapiens]
          Length = 527

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 5/122 (4%)

Query: 28  SNIVSPQEALPGRKEQTPVAAKHHVNGNRTVEPFPEGTQMAVFEKTGHAEVVRVVYQPEH 87
           S++ S  +    R+E +P  + H  +G+R  +       M   ++  H    R    P  
Sbjct: 10  SDVTSDDDMTRNRRESSPPHSVHSFSGDRDWDRRGRSRDMEPRDRWSHTRNPRSRMPPRD 69

Query: 88  MSFEELLKVFW----ENHDPTQGMRQGNDHGTQYRSAI-YPTSAKQMEAALSSKENYQKV 142
           +S   + K  +    E+   ++     +     Y++ +      K       + ENY+K+
Sbjct: 70  LSLPVVAKTSFEMDREDDRDSRAYESRSQDAESYQNVVDLAEDRKPHNTIQDNMENYRKL 129

Query: 143 LS 144
           LS
Sbjct: 130 LS 131


>gi|226423927 zinc finger, imprinted 2 [Homo sapiens]
          Length = 527

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 5/122 (4%)

Query: 28  SNIVSPQEALPGRKEQTPVAAKHHVNGNRTVEPFPEGTQMAVFEKTGHAEVVRVVYQPEH 87
           S++ S  +    R+E +P  + H  +G+R  +       M   ++  H    R    P  
Sbjct: 10  SDVTSDDDMTRNRRESSPPHSVHSFSGDRDWDRRGRSRDMEPRDRWSHTRNPRSRMPPRD 69

Query: 88  MSFEELLKVFW----ENHDPTQGMRQGNDHGTQYRSAI-YPTSAKQMEAALSSKENYQKV 142
           +S   + K  +    E+   ++     +     Y++ +      K       + ENY+K+
Sbjct: 70  LSLPVVAKTSFEMDREDDRDSRAYESRSQDAESYQNVVDLAEDRKPHNTIQDNMENYRKL 129

Query: 143 LS 144
           LS
Sbjct: 130 LS 131


>gi|33354273 zinc finger, imprinted 2 [Homo sapiens]
          Length = 527

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 5/122 (4%)

Query: 28  SNIVSPQEALPGRKEQTPVAAKHHVNGNRTVEPFPEGTQMAVFEKTGHAEVVRVVYQPEH 87
           S++ S  +    R+E +P  + H  +G+R  +       M   ++  H    R    P  
Sbjct: 10  SDVTSDDDMTRNRRESSPPHSVHSFSGDRDWDRRGRSRDMEPRDRWSHTRNPRSRMPPRD 69

Query: 88  MSFEELLKVFW----ENHDPTQGMRQGNDHGTQYRSAI-YPTSAKQMEAALSSKENYQKV 142
           +S   + K  +    E+   ++     +     Y++ +      K       + ENY+K+
Sbjct: 70  LSLPVVAKTSFEMDREDDRDSRAYESRSQDAESYQNVVDLAEDRKPHNTIQDNMENYRKL 129

Query: 143 LS 144
           LS
Sbjct: 130 LS 131


>gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens]
          Length = 1049

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 3    SATRRACQLLLL-HSLFPVPRM---GNSASNIVSPQEALPGRKEQTPVAAKHHVNGN 55
            S T R   LLLL +S  P+ R    G+ + N+  P  A+PG   ++   A H +NG+
Sbjct: 988  SGTPRGGALLLLRNSPQPLRRAASGGSGSENVGPPAAAVPGPLSRSTSVASHILNGS 1044


>gi|122937472 bicaudal C homolog 1 [Homo sapiens]
          Length = 974

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 70  FEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDH--------GTQYRSAI 121
           F K+  AE ++ + +  H+S++  +   +E    +       +H          + R+ I
Sbjct: 763 FSKSMPAETIKELRRANHVSYKPTMTTTYEGSSMSLSRSNSREHLGGGSESDNWRDRNGI 822

Query: 122 YPTSAKQMEAALSSKENYQKVLSEH 146
            P S  +  A++ S +  Q   +EH
Sbjct: 823 GPGSHSEFAASIGSPKRKQNKSTEH 847


>gi|169203146 PREDICTED: similar to heterogeneous nuclear
           ribonucleoprotein A1-like [Homo sapiens]
          Length = 321

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 14/118 (11%)

Query: 30  IVSPQEALPGRKEQTPVA----AKHHVNGNRTVEPFPEGTQMAVFEKTGHAEVVRVVYQP 85
           +V P+ A+     Q P A     K  V G +  E   E      +E+ G  EV+ ++   
Sbjct: 83  VVEPKTAVSREDSQRPGAYLTVKKIFVGGIK--EDTEEHPLRDYYEQYGKTEVIEIMTDQ 140

Query: 86  EHMSFEELLKVFWENHDPT-----QGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKEN 138
                 +   V ++NHD T     Q     N H  + R A+   S ++M +A SS+ +
Sbjct: 141 GSGKKRDFAFVTFDNHDSTDKIVIQKYHIVNGHNCEVRKAL---SKQKMASAPSSQRS 195


>gi|89035135 PREDICTED: similar to heterogeneous nuclear
           ribonucleoprotein A1-like [Homo sapiens]
          Length = 321

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 14/118 (11%)

Query: 30  IVSPQEALPGRKEQTPVA----AKHHVNGNRTVEPFPEGTQMAVFEKTGHAEVVRVVYQP 85
           +V P+ A+     Q P A     K  V G +  E   E      +E+ G  EV+ ++   
Sbjct: 83  VVEPKTAVSREDSQRPGAYLTVKKIFVGGIK--EDTEEHPLRDYYEQYGKTEVIEIMTDQ 140

Query: 86  EHMSFEELLKVFWENHDPT-----QGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKEN 138
                 +   V ++NHD T     Q     N H  + R A+   S ++M +A SS+ +
Sbjct: 141 GSGKKRDFAFVTFDNHDSTDKIVIQKYHIVNGHNCEVRKAL---SKQKMASAPSSQRS 195


>gi|89034333 PREDICTED: similar to heterogeneous nuclear
           ribonucleoprotein A1-like [Homo sapiens]
          Length = 321

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 14/118 (11%)

Query: 30  IVSPQEALPGRKEQTPVA----AKHHVNGNRTVEPFPEGTQMAVFEKTGHAEVVRVVYQP 85
           +V P+ A+     Q P A     K  V G +  E   E      +E+ G  EV+ ++   
Sbjct: 83  VVEPKTAVSREDSQRPGAYLTVKKIFVGGIK--EDTEEHPLRDYYEQYGKTEVIEIMTDQ 140

Query: 86  EHMSFEELLKVFWENHDPT-----QGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKEN 138
                 +   V ++NHD T     Q     N H  + R A+   S ++M +A SS+ +
Sbjct: 141 GSGKKRDFAFVTFDNHDSTDKIVIQKYHIVNGHNCEVRKAL---SKQKMASAPSSQRS 195


>gi|212549553 interleukin enhancer binding factor 3 isoform d [Homo
           sapiens]
          Length = 898

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 24/87 (27%), Positives = 32/87 (36%), Gaps = 12/87 (13%)

Query: 98  WENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQKVLSEHGFGPITTDIRE 157
           + N+ P QG ++G +HG    S  Y  S         S  NY+   +  G G      R 
Sbjct: 768 YSNYGPPQGKQKGYNHG--QGSYSYSNSYNSPGGGGGSDYNYESKFNYSGSGG-----RS 820

Query: 158 GQTFYYAEDYHQQYLSKNPNGYCGLGG 184
           G        Y     S NP  + G GG
Sbjct: 821 G-----GNSYGSGGASYNPGSHGGYGG 842


>gi|24234750 interleukin enhancer binding factor 3 isoform a [Homo
           sapiens]
          Length = 894

 Score = 27.3 bits (59), Expect = 8.4
 Identities = 24/87 (27%), Positives = 32/87 (36%), Gaps = 12/87 (13%)

Query: 98  WENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQKVLSEHGFGPITTDIRE 157
           + N+ P QG ++G +HG    S  Y  S         S  NY+   +  G G      R 
Sbjct: 764 YSNYGPPQGKQKGYNHG--QGSYSYSNSYNSPGGGGGSDYNYESKFNYSGSGG-----RS 816

Query: 158 GQTFYYAEDYHQQYLSKNPNGYCGLGG 184
           G        Y     S NP  + G GG
Sbjct: 817 G-----GNSYGSGGASYNPGSHGGYGG 838


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.132    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,016,870
Number of Sequences: 37866
Number of extensions: 352156
Number of successful extensions: 834
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 822
Number of HSP's gapped (non-prelim): 34
length of query: 195
length of database: 18,247,518
effective HSP length: 97
effective length of query: 98
effective length of database: 14,574,516
effective search space: 1428302568
effective search space used: 1428302568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.